Pregenerated sensors for RTN4RL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045287Ensembl transcript IDs: ENSMUST00000102514.4
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCGCATGTCCCGACACCACTAATGACTCACTTTGCGTGCCTTTaGCCACTGTGCTGGAGTGGATACGGTCCAGAGGCGCTCGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: GAHVPTPLMTHFACL*PLCWSGYGPEALGQ Trigger: CTGACCGAGCGCCTCTGGACCGTATCCACTCCAGCACAGTGGTCAAAGGCACGCAAAGTGAGTCATTAGTGGTGTCGGGACATGCGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 90 bp | TGCTCCTTCCAAAACCAGCAGGGTCCTTCAGCCCTTCTCTCCAAATaGCCAGGCTTCCGCAGAGCCCAGCTTCTTCAAGGGGCGCATGTC | + |
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Preference number: 1 (lower is better) Translates to: CSFQNQQGPSALLSK*PGFRRAQLLQGAHV Trigger: GACATGCGCCCCTTGAAGAAGCTGGGCTCTGCGGAAGCCTGGTCATTTGGAGAGAAGGGCTGAAGGACCCTGCTGGTTTTGGAAGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 90 bp | CTGAGATTGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTaGGTCCTGCTCCTTCCAAAACCAGCAGGGTCCTTCAGCCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LRLLVAPAGSGRALF*VLLLPKPAGSFSPS Trigger: AGAAGGGCTGAAGGACCCTGCTGGTTTTGGAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR GCA 90 bp | TGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTGAGTCCTaGTCCTTCCAAAACCAGCAGGGTCCTTCAGCCCTTCTCTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: CWLPQLALGEPCSES*SFQNQQGPSALLSK Trigger: TTTGGAGAGAAGGGCTGAAGGACCCTGCTGGTTTTGGAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 90 bp | GCGAGTACAGTTCTAAATGTCATCCACTGGCGATCTCTCCTTTGGTaGTTGGTTCTTGGACCCCAGCAGGTCTGCCGGGGGCTGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: ASTVLNVIHWRSLLW*LVLGPQQVCRGLPE Trigger: CTCAGGCAGCCCCCGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGATGACATTTAGAACTGTACTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 90 bp | CCAGAAACCTCTTCCCCAGCTCCGCCTAGCTTGCCTCCAGCACCCTaGCATCCACTTCTCTCGCTAATGTCTGCAGCTTCTACAGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: PETSSPAPPSLPPAP*HPLLSLMSAASTVG Trigger: CCCTACTGTAGAAGCTGCAGACATTAGCGAGAGAAGTGGATGTCAGGGTGCTGGAGGCAAGCTAGGCGGAGCTGGGGAAGAGGTTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CCA 90 bp | AGCCGAGTGAGACGTGATACCCTTCCCGTCTACGGCTGTACATTTTaGGCTTATAATCCACCAGGAAGGGTCCAGACGGTGGCTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SRVRRDTLPVYGCTF*AYNPPGRVQTVAEG Trigger: GCCTTCAGCCACCGTCTGGACCCTTCCTGGTGGATTATAAGCCCAAAATGTACAGCCGTAGACGGGAAGGGTATCACGTCTCACTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CCA 90 bp | TCAGACAAGAGCCAAGAGTGCTCTGAGATTGCTGGTTGCCCCAGCTaGCTCTGGGAGAGCCTTGTTCTGAGTCCTGCTCCTTCCAAAACC | + |
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Preference number: 1 (lower is better) Translates to: SDKSQECSEIAGCPS*LWESLVLSPAPSKT Trigger: GGTTTTGGAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGAGCACTCTTGGCTCTTGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR GCA 90 bp | GTAGGGAATTCAGGTCTGTCTATGCAGAGCACAAGAGACTGTGCTTaGCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: VGNSGLSMQSTRDCA*QKPLGQQPYSLTGL Trigger: AAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCTGCATAGACAGACCTGAATTCCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR GCA 90 bp | TCTGGTAGGGAATTCAGGTCTGTCTATGCAGAGCACAAGAGACTGTaGTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGG | + |
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Preference number: 1 (lower is better) Translates to: SGREFRSVYAEHKRL*LPETLGPTALFPDW Trigger: CCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCTGCATAGACAGACCTGAATTCCCTACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CCA 90 bp | TGGCCTGCACAAAGTGCTAAGAAGGACATTGTCCATCCAACCCATTaGACTAACACTGTAGACGCTGCCTTGTCTGCCAGCTTGAAAACC | + |
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Preference number: 1 (lower is better) Translates to: WPAQSAKKDIVHPTH*TNTVDAALSASLKT Trigger: GGTTTTCAAGCTGGCAGACAAGGCAGCGTCTACAGTGTTAGTCCAATGGGTTGGATGGACAATGTCCTTCTTAGCACTTTGTGCAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCTGCAGGCCCGACTCTTCCCACTaGCACCTTTGCCCCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: CQKPLGQQPYSLTGLACRPDSSH*HLCPQQ Trigger: TTGCTGGGGGCAAAGGTGTCAGTGGGAAGAGTCGGG...CCTGCAGGCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCTGCAGGGGTCCAGACGGTGGCTaGAGGCTTCAGCAGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: CQKPLGQQPYSLTGLACRGPDGG*RLQQPF Trigger: AAAAGGCTGCTGAAGCCTTCAGCCACCGTCTGGACC...CCTGCAGGCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTGAGTCCTGCTCCTTCCTTGCTGGACATGTaGCAGTGCTGGGTGACGGAG | + |
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Preference number: 2 (lower is better) Translates to: IAGCPSWLWESLVLSPAPSLLDM*QCWVTE Trigger: CTCCGTCACCCAGCACTGCCACATGTCCAGCAAGGA...AGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACAAGAGACTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCGCCCTTCTCTCCAAATaGCCAGGCTTCCGCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RAQETVLARNPWANSPIPALLSK*PGFRRA Trigger: GGCTCTGCGGAAGCCTGGTCATTTGGAGAGAAGGGC...GGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | TCCACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCGAGCCAAGAGTGCTCTaGGATTGCTGGTTGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: STGDLSFGDWFLDPSRSAEPRVL*DCWLPQ Trigger: CTGGGGCAACCAGCAATCTCAGAGCACTCTTGGCTC...GGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCAGCTCAGAGCCTCCCTaGCCTGCACAAAGTGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LCLPETLGPTALFPDWACSSEPP*PAQSAK Trigger: CTTAGCACTTTGTGCAGGCCAGGGAGGCTCTGAGCT...GCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACAAGAGACTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCCCCATGGATAGGGACTaGGGGTGGCATAGGGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: RAQETVLARNPWANSPIPPMDRD*GWHRVG Trigger: TCCAACCCTATGCCACCCTCAGTCCCTATCCATGGG...GGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTCTGGACATGTGGCAGTaGTGGGTGACGGAGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SGPSVGHWPKSLDVKTAALDMWQ*WVTEPW Trigger: CCAGGGCTCCGTCACCCAGCACTGCCACATGTCCAG...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCTCTCCTTTGGTGATTaGTTCTTGGACCCCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LCLPETLGPTALFPDWACLSFGD*FLDPSR Trigger: CCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAG...GCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CAA 90 bp | CATTGCGAGTACAGTTCTAAATGTCATCCACTGGCGATCTCTCCTTaGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCGGGGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: HCEYSSKCHPLAISP*VIGSWTPAGLPGAA Trigger: GGCAGCCCCCGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGATGACATTTAGAACTGTACTCGCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CAA 90 bp | ATTCTTGCTGCTTCTCTTCCTTCCCGACTCTTCCCACTGACACCTTaGCCCCCAGCAAGCCCAGGGACTATTGTTGCTGGCTGGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: ILAASLPSRLFPLTP*PPASPGTIVAGWGS Trigger: AGAACCCCAGCCAGCAACAATAGTCCCTGGGCTTGCTGGGGGCAAAGGTGTCAGTGGGAAGAGTCGGGAAGGAAGAGAAGCAGCAAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACAAGAGACTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTTGCCTCCAGCACCCTaGCATCCACTTCTCTCGCTA | + |
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Preference number: 2 (lower is better) Translates to: RAQETVLARNPWANSPIPLPPAP*HPLLSL Trigger: TAGCGAGAGAAGTGGATGTCAGGGTGCTGGAGGCAA...GGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCGGGAATTCTGTTCCTTGCTaGACATGTGGCAGTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TGDLSFGDWFLDPSRSAGNSVPC*TCGSAG Trigger: CCCAGCACTGCCACATGTCCAGCAAGGAACAGAATT...CCCGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CAA 90 bp | GGTAGGGAATTCAGGTCTGTCTATGCAGAGCACAAGAGACTGTGCTaGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GREFRSVYAEHKRLC*PETLGPTALFPDWA Trigger: AGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCTGCATAGACAGACCTGAATTCCCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCTAGATGTTAAAACTGCAGCTAAAGCCTCTCCTGAGGCCAGAGCTCAGGAGGCATTACCCCCATaGATAGGGACTGAGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: KSLDVKTAAKASPEARAQEALPP*IGTEGG Trigger: GCCACCCTCAGTCCCTATCCATGGGGGTAATGCCTC...CTGAGCTCTGGCCTCAGGAGAGGCTTTAGCTGCAGTTTTAACATCTAGGCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGACATTGTCCATCCAACCCATTGGACTAACACTGTAGACGCTGCCTTGTCTTCTGAGATTGCTGGTTaGCCCAGCTGGCTCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: KDIVHPTHWTNTVDAALSSEIAG*PSWLWE Trigger: CTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGA...AGACAAGGCAGCGTCTACAGTGTTAGTCCAATGGGTTGGATGGACAATGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | GGATTCAGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTGAAGGGTCCAGACGGTaGCTGAAGGCTTCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GFSISYSSGILSGREFRSEGSRR*LKASAA Trigger: GGCTGCTGAAGCCTTCAGCCACCGTCTGGACCCTTC...AGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCTGAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTGCTCTGAGATTGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTACGGCTGTACATTTTaGGCTTATAATCCACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KSALRLLVAPAGSGRALFYGCTF*AYNPPG Trigger: TCCTGGTGGATTATAAGCCCAAAATGTACAGCCGTA...GAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGAGCACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCCTAGATGTTAAAACTGCAGCTAAAGCCTCTCCTGAGGCCAGAGCTCAGCCTTGTCTGCCAGCTTaGAAACCCCAGAAACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KSLDVKTAAKASPEARAQPCLPA*KPQKPL Trigger: AAGAGGTTTCTGGGGTTTTCAAGCTGGCAGACAAGG...CTGAGCTCTGGCCTCAGGAGAGGCTTTAGCTGCAGTTTTAACATCTAGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR GCA 90 bp | TACTCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCACCTTGTTCTGAGTCCTaGTCCTTCCAAAACCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: YSGPSVGHWPKSLDVKTAPCSES*SFQNQQ Trigger: CTGCTGGTTTTGGAAGGAGCAGGACTCAGAACAAGG...TGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR GCA 90 bp | TACTCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGACAAGAGCCAAGAGTaGTCTGAGATTGCTGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: YSGPSVGHWPKSLDVKTADKSQE*SEIAGC Trigger: GCAACCAGCAATCTCAGAGCACTCTTGGCTCTTGTC...TGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | AGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTGTCTATTGCCCCAGCTGGCTCTaGGAGAGCCTTGTTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SISYSSGILSGREFRSVYCPSWL*ESLVLS Trigger: ACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCA...ATAGACAGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCCTAGATGTTAAAACTGCAGCTAAAGCCTCTCCTGAGGCCAGAGCTCAGACTAATGACTCACTTTaGGTGCCTTTGACCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: KSLDVKTAAKASPEARAQTNDSL*VPLTTV Trigger: CACAGTGGTCAAAGGCACGCAAAGTGAGTCATTAGT...CTGAGCTCTGGCCTCAGGAGAGGCTTTAGCTGCAGTTTTAACATCTAGGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR TCA 90 bp | TACTCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGATACAGTCCTTAATTaGGCAAATATAGGTTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: YSGPSVGHWPKSLDVKTADTVLN*ANIGSR Trigger: ACGGGAACCTATATTTGCTCAATTAAGGACTGTATC...TGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTGGGTTGGGGGACCTGTaGATTTATATATTTATATAT | + |
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Preference number: 2 (lower is better) Translates to: SGPSVGHWPKSLDVKTAAGLGDL*IYIFIY Trigger: ATATATAAATATATAAATGCACAGGTCCCCCAACCC...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CCA 90 bp | TACTCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCATATATATATATTATGTaGGTGTGTGGGCAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: YSGPSVGHWPKSLDVKTAYIYIM*VCGQSE Trigger: CTCACTCTGCCCACACACCCACATAATATATATATA...TGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 72 bp | AGCAGGTCTGCCGGGGGCTGCCTGAGACGTCAGGAATaGGAGGCATTACCCCCATGGATAGGGACTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SRSAGGCLRRQE*EALPPWIGTEG Trigger: ACCCTCAGTCCCTATCCATGGGGGTAATGCCTCTCATTCCTGACGTCTCAGGCAGCCCCCGGCAGACCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CCA 72 bp | GACTCACTTTGCGTGCCTTTGACCACTGTGCTGGAGTaGATACGGTCCAGAGGCGCTCGGTCAGGACAGCCG | + |
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Preference number: 3 (lower is better) Translates to: DSLCVPLTTVLE*IRSRGARSGQP Trigger: CGGCTGTCCTGACCGAGCGCCTCTGGACCGTATCCACTCCAGCACAGTGGTCAAAGGCACGCAAAGTGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 72 bp | CTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTaGGTCCTGCTCCTTCCAAAACCAGCAGGGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LVAPAGSGRALF*VLLLPKPAGSF Trigger: GAAGGACCCTGCTGGTTTTGGAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR GCA 72 bp | CCCCAGCTGGCTCTGGGAGAGCCTTGTTCTGAGTCCTaGTCCTTCCAAAACCAGCAGGGTCCTTCAGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: PQLALGEPCSES*SFQNQQGPSAL Trigger: AAGGGCTGAAGGACCCTGCTGGTTTTGGAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR GCA 72 bp | TCCAGCACCCTGACATCCACTTCTCTCGCTAATGTCTaGAGCTTCTACAGTAGGGGTGACGGGGTGCTCCGG | + |
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Preference number: 3 (lower is better) Translates to: SSTLTSTSLANV*SFYSRGDGVLR Trigger: CCGGAGCACCCCGTCACCCCTACTGTAGAAGCTGCAGACATTAGCGAGAGAAGTGGATGTCAGGGTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR CCA 72 bp | AGCCAAGAGTGCTCTGAGATTGCTGGTTGCCCCAGCTaGCTCTGGGAGAGCCTTGTTCTGAGTCCTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SQECSEIAGCPS*LWESLVLSPAP Trigger: AGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGAGCACTCTTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTTTCCCACTGACACCTTaGCCCCCAGCAAGCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SGPSVGHWPKSLDVKTAAFPLTP*PPASPG Trigger: CCCTGGGCTTGCTGGGGGCAAAGGTGTCAGTGGGAA...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 72 bp | GTCCCGACACCACTAATGACTCACTTTGCGTGCCTTTaGCCACTGTGCTGGAGTGGATACGGTCCAGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: VPTPLMTHFACL*PLCWSGYGPEA Trigger: CGCCTCTGGACCGTATCCACTCCAGCACAGTGGTCAAAGGCACGCAAAGTGAGTCATTAGTGGTGTCGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 72 bp | CAAAACCAGCAGGGTCCTTCAGCCCTTCTCTCCAAATaGCCAGGCTTCCGCAGAGCCCAGCTTCTTCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: QNQQGPSALLSK*PGFRRAQLLQG Trigger: CCCTTGAAGAAGCTGGGCTCTGCGGAAGCCTGGTCATTTGGAGAGAAGGGCTGAAGGACCCTGCTGGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| 3UTR TCA 72 bp | TCTTCCCCAGCTCCGCCTAGCTTGCCTCCAGCACCCTaGCATCCACTTCTCTCGCTAATGTCTGCAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSPAPPSLPPAP*HPLLSLMSAAS Trigger: AGAAGCTGCAGACATTAGCGAGAGAAGTGGATGTCAGGGTGCTGGAGGCAAGCTAGGCGGAGCTGGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR CCA 72 bp | GAGTGCTCTGAGATTGCTGGTTGCCCCAGCTGGCTCTaGGAGAGCCTTGTTCTGAGTCCTGCTCCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ECSEIAGCPSWL*ESLVLSPAPSK Trigger: TTTGGAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGAGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR TCA 72 bp | GTTCTAAATGTCATCCACTGGCGATCTCTCCTTTGGTaGTTGGTTCTTGGACCCCAGCAGGTCTGCCGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VLNVIHWRSLLW*LVLGPQQVCRG Trigger: CCCCCGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGATGACATTTAGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR TCA 72 bp | TTCTTGCTGCTTCTCTTCCTTCCCGACTCTTCCCACTaGCACCTTTGCCCCCAGCAAGCCCAGGGACTATTG | + |
|
Preference number: 3 (lower is better) Translates to: FLLLLFLPDSSH*HLCPQQAQGLL Trigger: CAATAGTCCCTGGGCTTGCTGGGGGCAAAGGTGTCAGTGGGAAGAGTCGGGAAGGAAGAGAAGCAGCAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTAAGAGTGCTCTGAGATaGCTGGTTGCCCCAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SGPSVGHWPKSLDVKTAAKSALR*LVAPAG Trigger: GCCAGCTGGGGCAACCAGCAATCTCAGAGCACTCTT...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR CCA 72 bp | AGACGTGATACCCTTCCCGTCTACGGCTGTACATTTTaGGCTTATAATCCACCAGGAAGGGTCCAGACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RRDTLPVYGCTF*AYNPPGRVQTV Trigger: CACCGTCTGGACCCTTCCTGGTGGATTATAAGCCCAAAATGTACAGCCGTAGACGGGAAGGGTATCACGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR-3UTR CAA 90 bp | TACTCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCATTTGGTGATTGGTTCTaGGACCCCAGCAGGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: YSGPSVGHWPKSLDVKTAFGDWF*DPSRSA Trigger: GGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAA...TGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCACAAGAGACTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCGTGCTAAGAAGGACATaGTCCATCCAACCCATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RAQETVLARNPWANSPIPVLRRT*SIQPIG Trigger: TCCAATGGGTTGGATGGACAATGTCCTTCTTAGCAC...GGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTTTGGTAAGGAGTGGGTaGGGGGACCTGTGCATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SGPSVGHWPKSLDVKTAALVRSG*GDLCIY Trigger: ATAAATGCACAGGTCCCCCAACCCACTCCTTACCAA...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR TCA 72 bp | GGGTGGCATAGGGTTGGACAGGGCAGGTTAACTAAGTaGTCTCAGACAAGAGCCAAGAGTGCTCTGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: GWHRVGQGRLTK*SQTRAKSALRL Trigger: CAATCTCAGAGCACTCTTGGCTCTTGTCTGAGATCACTTAGTTAACCTGCCCTGTCCAACCCTATGCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR CCA 72 bp | CCACTGCCAGACTACTCAGGGCCCTCAGTAGGTCACTaGCCAAAGAGCCTAGATGTTAAAACTGCAGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLPDYSGPSVGH*PKSLDVKTAAK Trigger: TTTAGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTAGTCTGGCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR CCA 72 bp | CAAAGTGCTAAGAAGGACATTGTCCATCCAACCCATTaGACTAACACTGTAGACGCTGCCTTGTCTGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QSAKKDIVHPTH*TNTVDAALSAS Trigger: GCTGGCAGACAAGGCAGCGTCTACAGTGTTAGTCCAATGGGTTGGATGGACAATGTCCTTCTTAGCACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR GCA 72 bp | ATAGGTATAAAACTGCACCTTCTGTGTGACTCTCATTaGGAGTACAGTTCTAAATGTCATCCACTGGCGATC | + |
|
Preference number: 3 (lower is better) Translates to: IGIKLHLLCDSH*EYSSKCHPLAI Trigger: GATCGCCAGTGGATGACATTTAGAACTGTACTCGCAATGAGAGTCACACAGAAGGTGCAGTTTTATACCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | ACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCTGCAGGCTGCCTTCGGGCCCCAAGGGCCGTaGCTGAGGATGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGPTALFPDWACLQAAFGPQGP*LRMPAA Trigger: TGCAGCAGGCATCCTCAGGCACGGCCCTTGGGGCCC...GAAGGCAGCCTGCAGGCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTGAGTCCTGCTCCTTCCACTGGGGGCACGGATaGGGGTCCTGCGAGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: CWLPQLALGEPCSESCSFHWGHG*GSCEHT Trigger: AGTGTGCTCGCAGGACCCCCATCCGTGCCCCCAGTG...GAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCGCGCTCACTGTCCTCTaGGATGCCCTCCGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPETLGPTALFPDWACALTVL*DALRDG Trigger: GCCATCCCGGAGGGCATCCCAGAGGACAGTGAGCGC...GCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | TGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCTGCAGGAGCAGCTTCAGATCCTaGCCTTGCCGCAGCTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQKPLGQQPYSLTGLACRSSFRS*PCRSSG Trigger: CCCCGAGCTGCGGCAAGGCCAGGATCTGAAGCTGCT...CCTGCAGGCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCACGGATGGGGGTCCTaGGAGCACACTTGCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPETLGPTALFPDWACHGWGS*EHTCPS Trigger: GGAAGGGCAAGTGTGCTCGCAGGACCCCCATCCGTG...GCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | GCTTATAATCCACCAGGAAGGGTCCAGACGGTGGCTGAAGGCTTCAGCAGCCTTTATCCAGGCCAGGAGTaGGGCCCCAAGGGCCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYNPPGRVQTVAEGFSSLYPGQE*GPKGRA Trigger: GGCACGGCCCTTGGGGCCCCACTCCTGGCCTGGATA...AAGGCTGCTGAAGCCTTCAGCCACCGTCTGGACCCTTCCTGGTGGATTATAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR TCA 90 bp | TCCACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCTGTGTGCCTGGCAGCTaGCAGTCATGGGCGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: STGDLSFGDWFLDPSRSACVPGS*QSWAQG Trigger: ACCCTGCGCCCATGACTGTCAGCTGCCAGGCACACA...GGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | ACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCGGGTCAGCGGAGAGTGACTaGCAGCCCCAGTATCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGDLSFGDWFLDPSRSAGSAESD*QPQYPG Trigger: GCCTGGATACTGGGGCTGGCAGTCACTCTCCGCTGA...CCCGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | TCCACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCATGGCGGGGCTGAAGTaGCCCTGCTGGAGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STGDLSFGDWFLDPSRSAMAGLK*PCWRKV Trigger: CACCTTCCTCCAGCAGGGCCACTTCAGCCCCGCCAT...GGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | CCACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCGCCCCGGAAGATGCCTTaGCCCAGGCTCCATAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLAISPLVIGSWTPAGLPPRKMP*PRLHSL Trigger: CAAGCTATGGAGCCTGGGCCAAGGCATCTTCCGGGG...CGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCACAAGAGACTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCCCAGGCCCCGGAAGATaGCTTGGCCCAGGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RAQETVLARNPWANSPIPPGPGR*LGPGSI Trigger: TATGGAGCCTGGGCCAAGGCATCTTCCGGGGCCTGG...GGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | CCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCTGCAGGCTGCCTTCTCTTCCTCTTGGGTCGTaGGGTGGGCATGATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLGQQPYSLTGLACRLPSLPLGS*GGHDVK Trigger: TTTGACATCATGCCCACCGCACGACCCAAGAGGAAG...AGAAGGCAGCCTGCAGGCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGCTCTGAGATTGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCAGCTTCACCAGGCCTTaGAAGGTCTCGGGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSALRLLVAPAGSGRALFSFTRP*KVSGAS Trigger: GCTGGCACCCGAGACCTTCCAAGGCCTGGTGAAGCT...GAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGAGCACTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTGAGTCCTGCTCCTTCTGTTCTGCAGGAAGATaGGCTCACTGTCCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CWLPQLALGEPCSESCSFCSAGR*AHCPLG Trigger: TCCCAGAGGACAGTGAGCGCATCTTCCTGCAGAACA...GAAGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | ACATTTTGGGCTTATAATCCACCAGGAAGGGTCCAGACGGTGGCTGAAGGCTTCGCAGGCCACCAAAGATaGCTGCGGGCAGGGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFWAYNPPGRVQTVAEGFAGHQR*LRAGRS Trigger: TGAGCGCCCTGCCCGCAGGCATCTTTGGTGGCCTGC...GAAGCCTTCAGCCACCGTCTGGACCCTTCCTGGTGGATTATAAGCCCAAAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGCTCTGAGATTGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCGGATGCCCTCCGGGATaGCAGCAAAGTTGTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSALRLLVAPAGSGRALFGCPPG*QQSCVP Trigger: AGGCACACAACTTTGCTGCCATCCCGGAGGGCATCC...GAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGAGCACTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCGGGCTGAAGTGGCCCTGCTaGAGGAAGGTGATGCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: TGDLSFGDWFLDPSRSAGLKWPC*RKVMRL Trigger: CAATCGCATCACCTTCCTCCAGCAGGGCCACTTCAG...CCCGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | GCTTATAATCCACCAGGAAGGGTCCAGACGGTGGCTGAAGGCTTCAGCAGCCTTAGGCGGATGGCCATGTaGGTGGCCTTTGTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AYNPPGRVQTVAEGFSSLRRMAM*VAFVPG Trigger: TCCAGGGACAAAGGCCACCCACATGGCCATCCGCCT...AAGGCTGCTGAAGCCTTCAGCCACCGTCTGGACCCTTCCTGGTGGATTATAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCTGAGTCCTGCTCCTGGCTGGTGCAGTTCTTaGCTGCCTTCTTGTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IAGCPSWLWESLVLSPAPGWCSS*LPSCNL Trigger: CAGGTTACAAGAAGGCAGGCAAGAACTGCACCAGCC...AGGAGCAGGACTCAGAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | TCCACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCTGGTTCCGGTTCCTGTaGCTGGTGCAGTTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: STGDLSFGDWFLDPSRSAWFRFL*LVQFLP Trigger: AGGCAAGAACTGCACCAGCCACAGGAACCGGAACCA...GGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR CAA 72 bp | ATGCAGAGCACAAGAGACTGTGCTTGCCAGAAACCCTaGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MQSTRDCACQKP*GQQPYSLTGLA Trigger: GGCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | TCCACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCTCTAGCTCCTCCAGATaGACAAAGCCCTCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STGDLSFGDWFLDPSRSASSSSR*TKPSKV Trigger: CACCTTCGAGGGCTTTGTGCATCTGGAGGAGCTAGA...GGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | TCCACTGGCGATCTCTCCTTTGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCAGGGTGGTTAGCCTGTaGAGGTCATGGAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STGDLSFGDWFLDPSRSARVVSL*RSWKAL Trigger: CAAGGCTTTCCATGACCTCCACAGGCTAACCACCCT...GGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | AGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTGTCTATCCTGAGGATGCCTGCTaGACCCCACTGGGGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SISYSSGILSGREFRSVYPEDAC*TPLGAR Trigger: CCGTGCCCCCAGTGGGGTGCAGCAGGCATCCTCAGG...ATAGACAGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCACAAGAGACTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCCTCACCTTAGAGATCTaGTTCCGGTTCCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAQETVLARNPWANSPIPLTLEI*FRFLWL Trigger: CAGCCACAGGAACCGGAACCAGATCTCTAAGGTGAG...GGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAGTCTCTTGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | AAGGACATTGTCCATCCAACCCATTGGACTAACACTGTAGACGCTGCCTTGTCTTTGGAAGGTCTCGGGTaGCAGCGTTCGCAGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KDIVHPTHWTNTVDAALSLEGLG*QRSQLS Trigger: CGACAGCTGCGAACGCTGGCACCCGAGACCTTCCAA...AGACAAGGCAGCGTCTACAGTGTTAGTCCAATGGGTTGGATGGACAATGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | TACTCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCATCCGGTTCCTGTGGCTaGTGCAGTTCTTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSGPSVGHWPKSLDVKTASGSCG*CSSCLP Trigger: AGGCAGGCAAGAACTGCACCAGCCACAGGAACCGGA...TGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTGGCAGCAAAGTTGTGTaGCTGGCAGCTGACAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGPSVGHWPKSLDVKTAAGSKVV*LAADSH Trigger: ATGACTGTCAGCTGCCAGGCACACAACTTTGCTGCC...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | TACTCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGAGACACTGGTCCTGTaGAGTTCCGGAAGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSGPSVGHWPKSLDVKTAETLVL*SSGSPP Trigger: TGGAGGACTTCCGGAACTGCACAGGACCAGTGTCTC...TGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR TCA 90 bp | GGATTCAGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTTGCCTTCTTGTAACCTaGCCTGGAGCCAGGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GFSISYSSGILSGREFRSCLLVT*PGARRM Trigger: CATCCGCCTGGCTCCAGGTCAGGTTACAAGAAGGCA...AGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCTGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR CCA 90 bp | AAGGACATTGTCCATCCAACCCATTGGACTAACACTGTAGACGCTGCCTTGTCTGCAAAGTTGTGTGCCTaGCAGCTGACAGTCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDIVHPTHWTNTVDAALSAKLCA*QLTVMG Trigger: GCCCATGACTGTCAGCTGCCAGGCACACAACTTTGC...AGACAAGGCAGCGTCTACAGTGTTAGTCCAATGGGTTGGATGGACAATGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR CAA 72 bp | TACAGTTCTAAATGTCATCCACTGGCGATCTCTCCTTaGGTGATTGGTTCTTGGACCCCAGCAGGTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSSKCHPLAISP*VIGSWTPAGLP Trigger: CGGCAGACCTGCTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGATGACATTTAGAACTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| 3UTR CAA 72 bp | CATCCAACCCATTGGACTAACACTGTAGACGCTGCCTaGTCTGCCAGCTTGAAAACCCCAGAAACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPTHWTNTVDAA*SASLKTPETSS Trigger: GGAAGAGGTTTCTGGGGTTTTCAAGCTGGCAGACAAGGCAGCGTCTACAGTGTTAGTCCAATGGGTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | AAGGACATTGTCCATCCAACCCATTGGACTAACACTGTAGACGCTGCCTTGTCTAGATACTGCAGGCTGTaGAGGCCACCAAAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDIVHPTHWTNTVDAALSRYCRL*RPPKMP Trigger: AGGCATCTTTGGTGGCCTGCACAGCCTGCAGTATCT...AGACAAGGCAGCGTCTACAGTGTTAGTCCAATGGGTTGGATGGACAATGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
||
| CDS-3UTR GCA 90 bp | GGATTCAGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTGGTTCCTGTGGCTGGTaGAGTTCTTGCCTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFSISYSSGILSGREFRSGSCGW*SSCLPS Trigger: AGAAGGCAGGCAAGAACTGCACCAGCCACAGGAACC...AGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCTGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CCA 90 bp | AGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTGTCTATCTGGTGAGGAGACACTaGTCCTGTGCAGTTCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: SISYSSGILSGREFRSVYLVRRH*SCAVPE Trigger: TTCCGGAACTGCACAGGACCAGTGTCTCCTCACCAG...ATAGACAGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR TCA 90 bp | AGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTGTCTATCCATGGAGAAACAAGTaGCTGAGATTGACCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SISYSSGILSGREFRSVYPWRNK*LRLTRS Trigger: GGACCTGGTCAATCTCAGTCACTTGTTTCTCCATGG...ATAGACAGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CCA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTACAAAGATGTCATCTTaGAGGTACTCGATATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SGPSVGHWPKSLDVKTAATKMSS*RYSIWL Trigger: CAACCATATCGAGTACCTCCAAGATGACATCTTTGT...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 90 bp | CCAGGCGGATGGCCATGTGGGTGGCCTTTGTCCCTGGAGGCCCCATaGGACGGATGGTGCTCCTTGCGGGCAGCCCTGTCAGAGGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: PGGWPCGWPLSLEAP*DGWCSLRAALSEVV Trigger: TACCACCTCTGACAGGGCTGCCCGCAAGGAGCACCATCCGTCCCATGGGGCCTCCAGGGACAAAGGCCACCCACATGGCCATCCGCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 90 bp | CCTGTGCAGTTCCGGAAGTCCTCCACCCTCAGCAGCTTCAGATCCTaGCCTTGCCGCAGCTCGGGGGTCGCGCAGGGGACAGCAGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: PVQFRKSSTLSSFRS*PCRSSGVAQGTAEL Trigger: TAGCTCTGCTGTCCCCTGCGCGACCCCCGAGCTGCGGCAAGGCCAGGATCTGAAGCTGCTGAGGGTGGAGGACTTCCGGAACTGCACAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 90 bp | GCGGGGCTGAAGTGGCCCTGCTGGAGGAAGGTGATGCGATTGTTCTaGAGGAAGATGCGCTCACTGTCCTCTGGGATGCCCTCCGGGATG | + |
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Preference number: 5 (lower is better) Translates to: AGLKWPCWRKVMRLF*RKMRSLSSGMPSGM Trigger: CATCCCGGAGGGCATCCCAGAGGACAGTGAGCGCATCTTCCTGCAGAACAATCGCATCACCTTCCTCCAGCAGGGCCACTTCAGCCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS TCA 90 bp | CTGGGATGCCCTCCGGGATGGCAGCAAAGTTGTGTGCCTGGCAGCTaGCAGTCATGGGCGCAGGGTAGCACACACAGTCTCGAGGACAAC | + |
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Preference number: 5 (lower is better) Translates to: LGCPPGWQQSCVPGS*QSWAQGSTHSLEDN Trigger: GTTGTCCTCGAGACTGTGTGTGCTACCCTGCGCCCATGACTGTCAGCTGCCAGGCACACAACTTTGCTGCCATCCCGGAGGGCATCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 90 bp | CTCACTGTCCTCTGGGATGCCCTCCGGGATGGCAGCAAAGTTGTGTaGCTGGCAGCTGACAGTCATGGGCGCAGGGTAGCACACACAGTC | + |
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Preference number: 5 (lower is better) Translates to: LTVLWDALRDGSKVV*LAADSHGRRVAHTV Trigger: GACTGTGTGTGCTACCCTGCGCCCATGACTGTCAGCTGCCAGGCACACAACTTTGCTGCCATCCCGGAGGGCATCCCAGAGGACAGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 90 bp | AGAGCTAGAGCCACGGAACCTTCGCAGCCATTCCCACAGGGAACGTaGCCGGCAGCCACAGTCCCAAGCATTCCCATTGAGGCGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RARATEPSQPFPQGT*PAATVPSIPIEAKE Trigger: TTCCTTCGCCTCAATGGGAATGCTTGGGACTGTGGCTGCCGGGCACGTTCCCTGTGGGAATGGCTGCGAAGGTTCCGTGGCTCTAGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | CTGTGCTTGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCGTCCTGCGAGCACACTaGCCCTTCCTCTTGGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: LCLPETLGPTALFPDWACVLRAH*PFLLGR Trigger: ACGACCCAAGAGGAAGGGCAAGTGTGCTCGCAGGAC...GCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCAAGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 90 bp | ACGGATGGGGGTCCTGCGAGCACACTTGCCCTTCCTCTTGGGTCGTaGGGTGGGCATGATGTCAAAGCTGAACTTGTGCTGATAGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: TDGGPASTLALPLGS*GGHDVKAELVLIVG Trigger: CCCGACTATCAGCACAAGTTCAGCTTTGACATCATGCCCACCGCACGACCCAAGAGGAAGGGCAAGTGTGCTCGCAGGACCCCCATCCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | AAGAGTGCTCTGAGATTGCTGGTTGCCCCAGCTGGCTCTGGGAGAGCCTTGTTCAAGCTTCACCAGGCCTaGGAAGGTCTCGGGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: KSALRLLVAPAGSGRALFKLHQA*EGLGCQ Trigger: CTGGCACCCGAGACCTTCCAAGGCCTGGTGAAGCTT...GAACAAGGCTCTCCCAGAGCCAGCTGGGGCAACCAGCAATCTCAGAGCACTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | AAGAGCCTAGATGTTAAAACTGCAGCTAAAGCCTCTCCTGAGGCCAGAGCTCAGCTTCAGATCCTGGCCTaGCCGCAGCTCGGGGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: KSLDVKTAAKASPEARAQLQILA*PQLGGR Trigger: GCGACCCCCGAGCTGCGGCAAGGCCAGGATCTGAAG...CTGAGCTCTGGCCTCAGGAGAGGCTTTAGCTGCAGTTTTAACATCTAGGCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 90 bp | GTCAGAGGTGGTAAGCGTGTGAGACTTGATCTGGTGAGGAGACACTaGTCCTGTGCAGTTCCGGAAGTCCTCCACCCTCAGCAGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: VRGGKRVRLDLVRRH*SCAVPEVLHPQQLQ Trigger: CTGAAGCTGCTGAGGGTGGAGGACTTCCGGAACTGCACAGGACCAGTGTCTCCTCACCAGATCAAGTCTCACACGCTTACCACCTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | TCAGGGCCCTCAGTAGGTCACTGGCCAAAGAGCCTAGATGTTAAAACTGCAGCTCACTTGCCCTTCCTCTaGGGTCGTGCGGTGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: SGPSVGHWPKSLDVKTAAHLPFL*GRAVGM Trigger: CATGCCCACCGCACGACCCAAGAGGAAGGGCAAGTG...AGCTGCAGTTTTAACATCTAGGCTCTTTGGCCAGTGACCTACTGAGGGCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS TCA 90 bp | AGAAAGAGGGTGGTTAGCCTGTGGAGGTCATGGAAAGCCTTGTGGTaGACCCACTGTAGCTGGTTCTCATGCAGCAGCAACCGGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RKRVVSLWRSWKALW*THCSWFSCSSNRSR Trigger: CCTGGACCGGTTGCTGCTGCATGAGAACCAGCTACAGTGGGTTCACCACAAGGCTTTCCATGACCTCCACAGGCTAACCACCCTCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAACCCTTGGGCCAACAGCCCTATTCCCTGACTGGGCTTGCCTGCAGGCACAAAGATGTCATCTaGGAGGTACTCGATATGGTT | + |
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Preference number: 5 (lower is better) Translates to: CQKPLGQQPYSLTGLACRHKDVI*EVLDMV Trigger: AACCATATCGAGTACCTCCAAGATGACATCTTTGTG...CCTGCAGGCAAGCCCAGTCAGGGAATAGGGCTGTTGGCCCAAGGGTTTCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | GCTTATAATCCACCAGGAAGGGTCCAGACGGTGGCTGAAGGCTTCAGCAGCCTTAGCTCAGTGAGGCTGTaGTTGAAGAGAAAGAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: AYNPPGRVQTVAEGFSSLSSVRL*LKRKRV Trigger: CACCCTCTTTCTCTTCAACAACAGCCTCACTGAGCT...AAGGCTGCTGAAGCCTTCAGCCACCGTCTGGACCCTTCCTGGTGGATTATAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | AGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTGTCTATGGGATGGCAGCAAAGTaGTGTGCCTGGCAGCTGACA | + |
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Preference number: 5 (lower is better) Translates to: SISYSSGILSGREFRSVYGMAAK*CAWQLT Trigger: TGTCAGCTGCCAGGCACACAACTTTGCTGCCATCCC...ATAGACAGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS-3UTR CAA 90 bp | GGATTCAGCATTTCTTACTCCTCAGGTATCCTCTCTGGTAGGGAATTCAGGTCTAGGAAGGTGATGCGATaGTTCTGCAGGAAGATGCGC | + |
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Preference number: 5 (lower is better) Translates to: GFSISYSSGILSGREFRSRKVMR*FCRKMR Trigger: GCGCATCTTCCTGCAGAACAATCGCATCACCTTCCT...AGACCTGAATTCCCTACCAGAGAGGATACCTGAGGAGTAAGAAATGCTGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 72 bp | AGCCAGGCGGATGGCCATGTGGGTGGCCTTTGTCCCTaGAGGCCCCATGGGACGGATGGTGCTCCTTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SQADGHVGGLCP*RPHGTDGAPCG Trigger: CCCGCAAGGAGCACCATCCGTCCCATGGGGCCTCCAGGGACAAAGGCCACCCACATGGCCATCCGCCTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CAA 72 bp | GACCTGGAGCCAGGCGGATGGCCATGTGGGTGGCCTTaGTCCCTGGAGGCCCCATGGGACGGATGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DLEPGGWPCGWP*SLEAPWDGWCS Trigger: GGAGCACCATCCGTCCCATGGGGCCTCCAGGGACAAAGGCCACCCACATGGCCATCCGCCTGGCTCCAGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 72 bp | GGGTGGCCTTTGTCCCTGGAGGCCCCATGGGACGGATaGTGCTCCTTGCGGGCAGCCCTGTCAGAGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: GWPLSLEAPWDG*CSLRAALSEVV Trigger: TACCACCTCTGACAGGGCTGCCCGCAAGGAGCACCATCCGTCCCATGGGGCCTCCAGGGACAAAGGCCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 72 bp | TGGCCATGTGGGTGGCCTTTGTCCCTGGAGGCCCCATaGGACGGATGGTGCTCCTTGCGGGCAGCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: WPCGWPLSLEAP*DGWCSLRAALS Trigger: TGACAGGGCTGCCCGCAAGGAGCACCATCCGTCCCATGGGGCCTCCAGGGACAAAGGCCACCCACATGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CAA 72 bp | CCACTGGGGGCACGGATGGGGGTCCTGCGAGCACACTaGCCCTTCCTCTTGGGTCGTGCGGTGGGCATGATG | + |
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Preference number: 6 (lower is better) Translates to: PLGARMGVLRAH*PFLLGRAVGMM Trigger: CATCATGCCCACCGCACGACCCAAGAGGAAGGGCAAGTGTGCTCGCAGGACCCCCATCCGTGCCCCCAGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS TCA 72 bp | GTGGCTGGTGCAGTTCTTGCCTGCCTTCTTGTAACCTaGCCTGGAGCCAGGCGGATGGCCATGTGGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VAGAVLACLLVT*PGARRMAMWVA Trigger: GGCCACCCACATGGCCATCCGCCTGGCTCCAGGTCAGGTTACAAGAAGGCAGGCAAGAACTGCACCAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | CTCTGGGATGCCCTCCGGGATGGCAGCAAAGTTGTGTaGCTGGCAGCTGACAGTCATGGGCGCAGGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LWDALRDGSKVV*LAADSHGRRVA Trigger: TGCTACCCTGCGCCCATGACTGTCAGCTGCCAGGCACACAACTTTGCTGCCATCCCGGAGGGCATCCCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | GGCGTGAAGCTTCACCAGGCCTTGGAAGGTCTCGGGTaGCAGCGTTCGCAGCTGTCGGTTGTCTCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: GVKLHQALEGLG*QRSQLSVVSKV Trigger: GACCTTGGAGACAACCGACAGCTGCGAACGCTGGCACCCGAGACCTTCCAAGGCCTGGTGAAGCTTCACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | GCCACGGAACCTTCGCAGCCATTCCCACAGGGAACGTaGCCGGCAGCCACAGTCCCAAGCATTCCCATTGAG | + |
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Preference number: 6 (lower is better) Translates to: ATEPSQPFPQGT*PAATVPSIPIE Trigger: CTCAATGGGAATGCTTGGGACTGTGGCTGCCGGGCACGTTCCCTGTGGGAATGGCTGCGAAGGTTCCGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | GCAGCAACCGGTCCAGGTTCACCAGGCCCCGGAAGATaGCTTGGCCCAGGCTCCATAGCTTGTTACCATGGA | + |
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Preference number: 6 (lower is better) Translates to: AATGPGSPGPGR*LGPGSIACYHG Trigger: TCCATGGTAACAAGCTATGGAGCCTGGGCCAAGGCATCTTCCGGGGCCTGGTGAACCTGGACCGGTTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CAA 72 bp | CGGATGGGGGTCCTGCGAGCACACTTGCCCTTCCTCTaGGGTCGTGCGGTGGGCATGATGTCAAAGCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RMGVLRAHLPFL*GRAVGMMSKLN Trigger: GTTCAGCTTTGACATCATGCCCACCGCACGACCCAAGAGGAAGGGCAAGTGTGCTCGCAGGACCCCCATCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | ATCCAGAGGGTGACCATGGCGGGGCTGAAGTGGCCCTaGTGGAGGAAGGTGATGCGATTGTTCTGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IQRVTMAGLKWP*WRKVMRLFCRK Trigger: CTTCCTGCAGAACAATCGCATCACCTTCCTCCAGCAGGGCCACTTCAGCCCCGCCATGGTCACCCTCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | AAGTGGCCCTGCTGGAGGAAGGTGATGCGATTGTTCTaGAGGAAGATGCGCTCACTGTCCTCTGGGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: KWPCWRKVMRLF*RKMRSLSSGMP Trigger: GGGCATCCCAGAGGACAGTGAGCGCATCTTCCTGCAGAACAATCGCATCACCTTCCTCCAGCAGGGCCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | GAGATACTGCAGGCTGTGCAGGCCACCAAAGATGCCTaGGGGCAGGGCGCTCAGTCCACACTTATAGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: EILQAVQATKDA*GQGAQSTLIEV Trigger: TACCTCTATAAGTGTGGACTGAGCGCCCTGCCCGCAGGCATCTTTGGTGGCCTGCACAGCCTGCAGTATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS GCA 72 bp | GGTCCTGCGAGCACACTTGCCCTTCCTCTTGGGTCGTaGGGTGGGCATGATGTCAAAGCTGAACTTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GPASTLALPLGS*GGHDVKAELVL Trigger: CAGCACAAGTTCAGCTTTGACATCATGCCCACCGCACGACCCAAGAGGAAGGGCAAGTGTGCTCGCAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 72 bp | TGGTGCAGTTCTTGCCTGCCTTCTTGTAACCTGACCTaGAGCCAGGCGGATGGCCATGTGGGTGGCCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: WCSSCLPSCNLT*SQADGHVGGLC Trigger: ACAAAGGCCACCCACATGGCCATCCGCCTGGCTCCAGGTCAGGTTACAAGAAGGCAGGCAAGAACTGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS TCA 72 bp | GTGGTTAGCCTGTGGAGGTCATGGAAAGCCTTGTGGTaGACCCACTGTAGCTGGTTCTCATGCAGCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: VVSLWRSWKALW*THCSWFSCSSN Trigger: GTTGCTGCTGCATGAGAACCAGCTACAGTGGGTTCACCACAAGGCTTTCCATGACCTCCACAGGCTAACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CCA 72 bp | TCGGTAAGCTCTTTCCCAGAGCTCACCTTAGAGATCTaGTTCCGGTTCCTGTGGCTGGTGCAGTTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SVSSFPELTLEI*FRFLWLVQFLP Trigger: AGGCAAGAACTGCACCAGCCACAGGAACCGGAACCAGATCTCTAAGGTGAGCTCTGGGAAAGAGCTTACCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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| CDS CAA 72 bp | GTGACTGAGATTGACCAGGTCCACAAAGATGTCATCTaGGAGGTACTCGATATGGTTGTCCTGCAAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: VTEIDQVHKDVI*EVLDMVVLQVE Trigger: CTCTACTTGCAGGACAACCATATCGAGTACCTCCAAGATGACATCTTTGTGGACCTGGTCAATCTCAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102514.4 |
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