Pregenerated sensors for RTN4R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043811Ensembl transcript IDs: ENSMUST00000059589.6
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTaGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: NSYLYIPRSGWEVAF*NKRHPRNPVNMMGW Trigger: CCACCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| 3UTR-3UTR CCA 90 bp | ACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCGTCCCTGGCTCTGGCTaGCGGCGTGGAGGGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: TAIRVGGGVLEQTPPPEPVPGSG*RRGGRP Trigger: GGGTCTCCCTCCACGCCGCCAGCCAGAGCCAGGGAC...GGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| 3UTR-3UTR CCA 90 bp | TATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGGCCTGTCCCTGGCTCTaGCTGGCGGCGTGGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: YIPRSGWEVAFWNKRHPRACPWL*LAAWRE Trigger: CTCCCTCCACGCCGCCAGCCAGAGCCAGGGACAGGC...CCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| 3UTR-3UTR CCA 90 bp | ACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCGAGATGGGGGTGGGCTaGTGGGGAGGCATCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TAIRVGGGVLEQTPPPEPEMGVG*WGGICQ Trigger: CTGACAGATGCCTCCCCACCAGCCCACCCCCATCTC...GGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGCTCAGAGCCTGTCCCTaGCTCTGGCTGGCGGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: EVAFWNKRHPRNPVNMMGLRACP*LWLAAW Trigger: CCACGCCGCCAGCCAGAGCCAGGGACAGGCTCTGAG...CCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| 3UTR-3UTR CCA 90 bp | TTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGGTAAACATGATGGGGTaGAGATGGGGGTGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: FISLYTAIRVGGGVLEQTVNMMG*RWGWAG Trigger: ACCAGCCCACCCCCATCTCCACCCCATCATGTTTAC...CGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| 3UTR CCA 72 bp | CTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTaGAACAAACGCCACCCCCGGAACCCTGTAAACATG | + |
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Preference number: 3 (lower is better) Translates to: LYIPRSGWEVAF*NKRHPRNPVNM Trigger: CATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| 3UTR CCA 72 bp | ATTCATATCTCTATATACCGCGATCCGGGTGGGAGGTaGCGTTCTGGAACAAACGCCACCCCCGGAACCCTG | + |
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Preference number: 3 (lower is better) Translates to: IHISIYRDPGGR*RSGTNATPGTL Trigger: CAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | CGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGCCAGACGGCAGTGGCTaGGGGTGCGATTCTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RDPGGRWRSGTNATPGTLPDGSG*GCDSSG Trigger: CCCGGAAGAATCGCACCCGCAGCCACTGCCGTCTGG...CAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCCAGTGGGCACAGCCTaGAGACCCTGCTGGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WLAAWRETPYVHTPGGWWPVGTA*RPCWGQ Trigger: CTGCCCCCAGCAGGGTCTGCAGGCTGTGCCCACTGG...CCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | ACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCAGGCTGGGATGCCAGTaGGCACAGCCTGCAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: TAIRVGGGVLEQTPPPEPRLGCQ*AQPADP Trigger: AGGGTCTGCAGGCTGTGCCCACTGGCATCCCAGCCT...GGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR TCA 90 bp | TGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGGGGACGGAAGGGTCCTaGAGCCACAGCACAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: WLAAWRETPYVHTPGGWWGTEGS*SHSTAL Trigger: GAGGGCTGTGCTGTGGCTTCAGGACCCTTCCGTCCC...CCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | CGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGGGCAGTGGCTGCGGGTaGGATTCTTCCGGGAACAAC | + |
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Preference number: 4 (lower is better) Translates to: RDPGGRWRSGTNATPGTLGSGCG*DSSGNN Trigger: GTTGTTCCCGGAAGAATCGCACCCGCAGCCACTGCC...CAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | TATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGCGGTCTGCCAGGCGTTaGGGCAGGTTGCAGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: YIPRSGWEVAFWNKRHPRRSARR*GRLQGT Trigger: GGTGCCCTGCAACCTGCCCCAACGCCTGGCAGACCG...CCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR TCA 90 bp | TGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGACAGGTAGAGGGTCATaGGGCGGCCAAGGTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: WLAAWRETPYVHTPGGWWTGRGS*GGQGPG Trigger: TCCGGGACCTTGGCCGCCTCATGACCCTCTACCTGT...CCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | CTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCTGTCTAGGTGCAGTGTGTaGAGGTGGCCCAGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LAAWRETPYVHTPGGWWLSRCSV*RWPRPW Trigger: CCACGGCCTGGGCCACCTGCACACACTGCACCTAGA...CAGCCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | CTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCTGGGCGTTGGGGCAGGTTaGAGGGCACCTCTGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LAAWRETPYVHTPGGWWLGVGAG*RAPLMR Trigger: CCTCATCAGAGGTGCCCTGCAACCTGCCCCAACGCC...CAGCCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | CCCTGGCTCTGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTTCGCTGGCTAGAGGCTaGGATGCCAGTGGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: PWLWLAAWRETPYVHTPGSLARG*DASGHS Trigger: GCTGTGCCCACTGGCATCCCAGCCTCTAGCCAGCGA...ACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCAGAGCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | CTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCTGCTGGCTGGCAGCACTTaGGGAGGCTCAGCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LAAWRETPYVHTPGGWWLLAGST*GGSAAP Trigger: AGGAGCTGCTGAGCCTCCCCAAGTGCTGCCAGCCAG...CAGCCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | CTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCTGAGTGGTGGGAAGTCCTaGTGGCTCGGAACCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LAAWRETPYVHTPGGWWLSGGKS*WLGTPR Trigger: CCTGGGGGTTCCGAGCCACCAGGACTTCCCACCACT...CAGCCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | GGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGTGGAGGCCCCACTTCCCGCCTaGCCCAGACGGCAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GVLEQTPPPEPCKHDGVEAPLPA*PRRQWL Trigger: CAGCCACTGCCGTCTGGGCCAGGCGGGAAGTGGGGC...CTCCACCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | GCTCTGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGCCACATCGGTCTAGGTaGAGTGTGTGCAGGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ALAGGVEGDPICTHTWWLPHRSR*SVCRWP Trigger: GGGCCACCTGCACACACTGCACCTAGACCGATGTGG...CAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | CGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTGCAGGAAGATTCGCTaGCTAGAGGCTGGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: RDPGGRWRSGTNATPGTLCRKIR*LEAGMP Trigger: TGGCATCCCAGCCTCTAGCCAGCGAATCTTCCTGCA...CAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGCCGCAGGGCAGTCAGTaGGGGCTCTGCAGAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EVAFWNKRHPRNPVNMMGPQGSQ*GLCRAG Trigger: CCCAGCTCTGCAGAGCCCCCACTGACTGCCCTGCGG...CCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR TCA 90 bp | CCCTGGCTCTGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTTCCTCATCAGTGAGCTaGCTGGTCTGGATGGGACGG | + |
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Preference number: 4 (lower is better) Translates to: PWLWLAAWRETPYVHTPGSSSVS*LVWMGR Trigger: CCGTCCCATCCAGACCAGTCAGCTCACTGATGAGGA...ACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCAGAGCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | ATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCATGCCAGCAGCCTaGTTCCTCCGGAGGACGCCC | + |
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Preference number: 4 (lower is better) Translates to: ISIYRDPGGRWRSGTNATPMPAA*FLRRTP Trigger: GGGCGTCCTCCGGAGGAAGCAGGCTGCTGGCATGGG...GGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | GCTCTGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGCGGAAGGCATGTGGGTaGACACGAGCCACATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: ALAGGVEGDPICTHTWWLRKACG*TRATWF Trigger: GAACCATGTGGCTCGTGTGCACCCACATGCCTTCCG...CAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | ATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCGGTGGGAAGTCCTGGTaGCTCGGAACCCCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ISIYRDPGGRWRSGTNATGGKSW*LGTPRP Trigger: CGGCCTGGGGGTTCCGAGCCACCAGGACTTCCCACC...GGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | CTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCTGGGAGAGTCATTGATGTaGCGAGGGCCTGAGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: LAAWRETPYVHTPGGWWLGESLM*RGPEPL Trigger: CAATGGCTCAGGCCCTCGGCACATCAATGACTCTCC...CAGCCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | GAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGCCAGAGGAGCAAGGCTaGAGGCCAGAGCAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: EVAFWNKRHPRNPVNMMGPEEQG*RPEQAE Trigger: CTCTGCCTGCTCTGGCCTGCAGCCTTGCTCCTCTGG...CCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | TGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGCAGCCAGGCCCAGAGTaGACGTGCCCGGCAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: WEVAFWNKRHPRNPVNMMQPGPE*TCPAVT Trigger: TGTGACTGCCGGGCACGTCCACTCTGGGCCTGGCTG...CATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGTGGCCCAGACGGCAGTaGCTGCGGGTGCGATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EVAFWNKRHPRNPVNMMGWPRRQ*LRVRFF Trigger: GAAGAATCGCACCCGCAGCCACTGCCGTCTGGGCCA...CCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR TCA 90 bp | TCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCGGAGGGTCAGACCAGTaGAGGCAGCAGCATCGATCC | + |
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Preference number: 4 (lower is better) Translates to: SLYTAIRVGGGVLEQTPPGGSDQ*RQQHRS Trigger: GGATCGATGCTGCTGCCTTCACTGGTCTGACCCTCC...GGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR TCA 90 bp | TATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGGCAGAAAGAGATGCGTaGGGTTGCCCAGGTCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: YIPRSGWEVAFWNKRHPRAERDA*GCPGLE Trigger: TTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGC...CCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | CTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCTGCCATGCAGAAAGAGATaGGTGAGGTTGCCCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LAAWRETPYVHTPGGWWLPCRKR*VRLPRS Trigger: AGACCTGGGCAACCTCACGCATCTCTTTCTGCATGG...CAGCCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | ATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCGAGGGCCTGAGCCATTaGCTGGTGGAGTGTCACCGG | + |
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Preference number: 4 (lower is better) Translates to: ISIYRDPGGRWRSGTNATEGLSH*LVECHR Trigger: CCGGTGACACTCCACCAGGCAATGGCTCAGGCCCTC...GGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | GCTCTGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGCGTGAGAGATTCGGTTaGCATGCAGGAAGATTCGCT | + |
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Preference number: 4 (lower is better) Translates to: ALAGGVEGDPICTHTWWLRERFG*HAGRFA Trigger: AGCGAATCTTCCTGCATGGCAACCGAATCTCTCACG...CAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | TGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGAGGCGGTCAAGACTGTaGAGGCCACGGAAAGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: WEVAFWNKRHPRNPVNMMRRSRL*RPRKAC Trigger: GCACGCTTTCCGTGGCCTGCACAGTCTTGACCGCCT...CATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | TCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCAGTCAGTGGGGGCTCTaGAGAGCTGGGCAAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLYTAIRVGGGVLEQTPPSQWGL*RAGQSS Trigger: GGAACTTTGCCCAGCTCTGCAGAGCCCCCACTGACT...GGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGCGAGCCACATGGTTCTaGTGCAAGAGGAGGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EVAFWNKRHPRNPVNMMGRATWF*CKRRRS Trigger: TGACCGCCTCCTCTTGCACCAGAACCATGTGGCTCG...CCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | TGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGACAGCCTGCAGACCCTaGTGGGGGCAGCTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: WEVAFWNKRHPRNPVNMMTACRP*WGQLVV Trigger: AACAACAAGCTGCCCCCAGCAGGGTCTGCAGGCTGT...CATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | GAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTAAACATGATGGGGGCCACATGGTTCTGGTaGAAGAGGAGGCGGTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: EVAFWNKRHPRNPVNMMGATWFW*KRRRSR Trigger: TCTTGACCGCCTCCTCTTGCACCAGAACCATGTGGC...CCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR GCA 90 bp | TATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGTCACTAAGATCTAGTTaGTCCAGGAGGGTCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: YIPRSGWEVAFWNKRHPRSLRSS*SRRVRP Trigger: TGGTCTGACCCTCCTGGAGCAACTAGATCTTAGTGA...CCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | CTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGCTGAGCTTGTTGTTACCTTaGGCTCATTGTAGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: LAAWRETPYVHTPGGWWLSLLLP*AHCSTH Trigger: GTGTGTGCTACAATGAGCCCAAGGTAACAACAAGCT...CAGCCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | TTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGTGCAGTGTGTGCAGGTaGCCCAGGCCGTGGAACGTG | + |
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Preference number: 4 (lower is better) Translates to: FISLYTAIRVGGGVLEQTCSVCR*PRPWNV Trigger: CACGTTCCACGGCCTGGGCCACCTGCACACACTGCA...CGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CCA 90 bp | TCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCTCTGCAGGCAGCATaGAGAGGTTGTTGGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLYTAIRVGGGVLEQTPPPLQAA*RGCWQT Trigger: TGTTTGCCAACAACCTCTCCATGCTGCCTGCAGAGG...GGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CCA 90 bp | AAATTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAACGTCCCCTGTTCCACTaGCCCCACTTCCCGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KFISLYTAIRVGGGVLEQRPLFH*PHFPPG Trigger: GCCAGGCGGGAAGTGGGGCCAGTGGAACAGGGGACG...TTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR GCA 90 bp | ATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCGGGATACGGTTGCCATaGAGAAAGAGATGCGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISIYRDPGGRWRSGTNATGIRLP*RKRCVR Trigger: CCTCACGCATCTCTTTCTGCATGGCAACCGTATCCC...GGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CCA 90 bp | TTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGGTCCCGGAAGGCATGTaGGTGCACACGAGCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: FISLYTAIRVGGGVLEQTVPEGM*VHTSHM Trigger: CATGTGGCTCGTGTGCACCCACATGCCTTCCGGGAC...CGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CCA 90 bp | TTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGGCTGACTGGTCTGGATaGGACGGAAGGGTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FISLYTAIRVGGGVLEQTADWSG*DGRVLK Trigger: CTTCAGGACCCTTCCGTCCCATCCAGACCAGTCAGC...CGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR TCA 90 bp | AAATTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAACTCGCAGCTGGCACGTaGGAGATTCGGTTGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KFISLYTAIRVGGGVLEQLAAGT*EIRLPC Trigger: GCATGGCAACCGAATCTCTCACGTGCCAGCTGCGAG...TTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR TCA 90 bp | AAATTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAACCCAGGGGTTGTCATTaGGTCGCAGGTACTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFISLYTAIRVGGGVLEQPRGCH*VAGTAE Trigger: CTCTGCAGTACCTGCGACTCAATGACAACCCCTGGG...TTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR TCA 90 bp | AAATTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAACCCGGGTTCCAGTACTaGGGCTTTGTCTGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KFISLYTAIRVGGGVLEQPGFQY*GFVCSI Trigger: GATGCTGCAGACAAAGCCTCAGTACTGGAACCCGGG...TTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR GCA 90 bp | TTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGGCCAGCGCATTAGAGTaGAGCCACAGGATAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FISLYTAIRVGGGVLEQTASALE*SHRIVR Trigger: TCTCACTATCCTGTGGCTGCACTCTAATGCGCTGGC...CGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR GCA 90 bp | TTCATATCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGTGTCCAAAGTACCAGTaGAAGGCCCAGAGGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FISLYTAIRVGGGVLEQTCPKYQ*KAQRSK Trigger: CTTGCTCCTCTGGGCCTTGCACTGGTACTTTGGACA...CGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGATATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | GGGTGCGATTCTTCCGGGAACAACCTGGCCTCCTGCGGGGACCAGTaGTGGGAAGTCCTGGTGGCTCGGAACCCCCAGGCCGCAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCDSSGNNLASCGDQ*WEVLVARNPQAAGQ Trigger: CTGCCCTGCGGCCTGGGGGTTCCGAGCCACCAGGACTTCCCACCACTGGTCCCCGCAGGAGGCCAGGTTGTTCCCGGAAGAATCGCACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 90 bp | CGGAATAGGCCGGGACCCAGCTCCCGCAGGCCACATCGGTCTAGGTaGAGTGTGTGCAGGTGGCCCAGGCCGTGGAACGTGGTAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNRPGPSSRRPHRSR*SVCRWPRPWNVVGS Trigger: GGACCCTACCACGTTCCACGGCCTGGGCCACCTGCACACACTGCACCTAGACCGATGTGGCCTGCGGGAGCTGGGTCCCGGCCTATTCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 90 bp | GGCAGTGGCTGCGGGTGCGATTCTTCCGGGAACAACCTGGCCTCCTaGGGGGACCAGTGGTGGGAAGTCCTGGTGGCTCGGAACCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGCGCDSSGNNLAS*GDQWWEVLVARNPQ Trigger: CTGGGGGTTCCGAGCCACCAGGACTTCCCACCACTGGTCCCCGCAGGAGGCCAGGTTGTTCCCGGAAGAATCGCACCCGCAGCCACTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | GCCCAGACGGCAGTGGCTGCGGGTGCGATTCTTCCGGGAACAACCTaGCCTCCTGCGGGGACCAGTGGTGGGAAGTCCTGGTGGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQTAVAAGAILPGTT*PPAGTSGGKSWWLG Trigger: TCCGAGCCACCAGGACTTCCCACCACTGGTCCCCGCAGGAGGCCAGGTTGTTCCCGGAAGAATCGCACCCGCAGCCACTGCCGTCTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | TGCGATTCTTCCGGGAACAACCTGGCCTCCTGCGGGGACCAGTGGTaGGAAGTCCTGGTGGCTCGGAACCCCCAGGCCGCAGGGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CDSSGNNLASCGDQW*EVLVARNPQAAGQS Trigger: TGACTGCCCTGCGGCCTGGGGGTTCCGAGCCACCAGGACTTCCCACCACTGGTCCCCGCAGGAGGCCAGGTTGTTCCCGGAAGAATCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | CCTGAACCCTCTGCGTCCCCTGTTCCACTGGCCCCACTTCCCGCCTaGCCCAGACGGCAGTGGCTGCGGGTGCGATTCTTCCGGGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PEPSASPVPLAPLPA*PRRQWLRVRFFREQ Trigger: TTGTTCCCGGAAGAATCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCGGGAAGTGGGGCCAGTGGAACAGGGGACGCAGAGGGTTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CAA 90 bp | GCTCTGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGACGGTCTGCCAGGCGTaGGGGCAGGTTGCAGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALAGGVEGDPICTHTWWLTVCQA*GQVAGH Trigger: GTGCCCTGCAACCTGCCCCAACGCCTGGCAGACCGT...CAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCAGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | AGGCGGCCAAGGTCCCGGAAGGCATGTGGGTGCACACGAGCCACATaGTTCTGGTGCAAGAGGAGGCGGTCAAGACTGTGCAGGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: RRPRSRKACGCTRAT*FWCKRRRSRLCRPR Trigger: CCGTGGCCTGCACAGTCTTGACCGCCTCCTCTTGCACCAGAACCATGTGGCTCGTGTGCACCCACATGCCTTCCGGGACCTTGGCCGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CAA 90 bp | CGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGGCTGGGGGCAGCTTGTaGTTACCTTGGGCTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RDPGGRWRSGTNATPGTLAGGSL*LPWAHC Trigger: ACAATGAGCCCAAGGTAACAACAAGCTGCCCCCAGC...CAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CAA 90 bp | CGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCGGAACCCTGTCCAGTACTGAGGCTTaGTCTGCAGCATCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RDPGGRWRSGTNATPGTLSSTEA*SAASGW Trigger: CCAGCCAGATGCTGCAGACAAAGCCTCAGTACTGGA...CAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS TCA 90 bp | GGCTGGCAGCACTTGGGGAGGCTCAGCAGCTCCTCATCAGTGAGCTaGCTGGTCTGGATGGGACGGAAGGGTCCTGAAGCCACAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GWQHLGRLSSSSSVS*LVWMGRKGPEATAQ Trigger: CTGTGCTGTGGCTTCAGGACCCTTCCGTCCCATCCAGACCAGTCAGCTCACTGATGAGGAGCTGCTGAGCCTCCCCAAGTGCTGCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 90 bp | AGGTCCCGGAAGGCATGTGGGTGCACACGAGCCACATGGTTCTGGTaGAAGAGGAGGCGGTCAAGACTGTGCAGGCCACGGAAAGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRKACGCTRATWFW*KRRRSRLCRPRKAC Trigger: GCACGCTTTCCGTGGCCTGCACAGTCTTGACCGCCTCCTCTTGCACCAGAACCATGTGGCTCGTGTGCACCCACATGCCTTCCGGGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | CCAAGGTCCCGGAAGGCATGTGGGTGCACACGAGCCACATGGTTCTaGTGCAAGAGGAGGCGGTCAAGACTGTGCAGGCCACGGAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRSRKACGCTRATWF*CKRRRSRLCRPRKA Trigger: CGCTTTCCGTGGCCTGCACAGTCTTGACCGCCTCCTCTTGCACCAGAACCATGTGGCTCGTGTGCACCCACATGCCTTCCGGGACCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | GGGAAGTCCTGGTGGCTCGGAACCCCCAGGCCGCAGGGCAGTCAGTaGGGGCTCTGCAGAGCTGGGCAAAGTTCCAAATGGAGAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GKSWWLGTPRPQGSQ*GLCRAGQSSKWRVI Trigger: AATGACTCTCCATTTGGAACTTTGCCCAGCTCTGCAGAGCCCCCACTGACTGCCCTGCGGCCTGGGGGTTCCGAGCCACCAGGACTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 90 bp | AGGTCACTGGCAGCGAGGCGCTTAAGATCACGGTCTGCCAGGCGTTaGGGCAGGTTGCAGGGCACCTCTGATGAGGAACCTCGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLAARRLRSRSARR*GRLQGTSDEEPRNF Trigger: GAAGTTCCGAGGTTCCTCATCAGAGGTGCCCTGCAACCTGCCCCAACGCCTGGCAGACCGTGATCTTAAGCGCCTCGCTGCCAGTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTCTGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTCCAAATGGAGAGTCATaGATGTGCCGAGGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWLWLAAWRETPYVHTPGPNGES*MCRGPE Trigger: CTCAGGCCCTCGGCACATCAATGACTCTCCATTTGG...ACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCAGAGCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 90 bp | ACACGAGCCACATGGTTCTGGTGCAAGAGGAGGCGGTCAAGACTGTaGAGGCCACGGAAAGCGTGCTCAGGCACACTGGGGATACGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRATWFWCKRRRSRL*RPRKACSGTLGIRL Trigger: CAACCGTATCCCCAGTGTGCCTGAGCACGCTTTCCGTGGCCTGCACAGTCTTGACCGCCTCCTCTTGCACCAGAACCATGTGGCTCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 90 bp | GGCTCTGCAGAGCTGGGCAAAGTTCCAAATGGAGAGTCATTGATGTaGCGAGGGCCTGAGCCATTGCCTGGTGGAGTGTCACCGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSAELGKVPNGESLM*RGPEPLPGGVSPGG Trigger: GCCTCCCGGTGACACTCCACCAGGCAATGGCTCAGGCCCTCGGCACATCAATGACTCTCCATTTGGAACTTTGCCCAGCTCTGCAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGCGGCGTGGAGGGAGACCCCATATGTACACACACCTGGTGGCTGGTGGACACTGGGGATACGGTaGCCATGCAGAAAGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: WLAAWRETPYVHTPGGWWTLGIR*PCRKRC Trigger: GCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGT...CCACCAGCCACCAGGTGTGTGTACATATGGGGTCTCCCTCCACGCCGCCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 90 bp | GCGTGCTCAGGCACACTGGGGATACGGTTGCCATGCAGAAAGAGATaGGTGAGGTTGCCCAGGTCTCGAAAGGTGTTGTCAGGGAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ACSGTLGIRLPCRKR*VRLPRSRKVLSGSA Trigger: GGCACTCCCTGACAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGTGCCTGAGCACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS-3UTR CAA 90 bp | TCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCCCTGCTGGGGGCAGCTaGTTGTTACCTTGGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLYTAIRVGGGVLEQTPPPAGGS*LLPWAH Trigger: ATGAGCCCAAGGTAACAACAAGCTGCCCCCAGCAGG...GGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS TCA 90 bp | GCTCAGGCACACTGGGGATACGGTTGCCATGCAGAAAGAGATGCGTaGGGTTGCCCAGGTCTCGAAAGGTGTTGTCAGGGAGTGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQAHWGYGCHAERDA*GCPGLERCCQGVPA Trigger: TGCAGGCACTCCCTGACAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGTGCCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 90 bp | AGGCCACGGAAAGCGTGCTCAGGCACACTGGGGATACGGTTGCCATaGAGAAAGAGATGCGTGAGGTTGCCCAGGTCTCGAAAGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPRKACSGTLGIRLP*RKRCVRLPRSRKVL Trigger: CAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGTGCCTGAGCACGCTTTCCGTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS-3UTR CAA 90 bp | TCTCTATATACCGCGATCCGGGTGGGAGGTGGCGTTCTGGAACAAACGCCACCCTCACACACCCAGGGGTaGTCATTGAGTCGCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLYTAIRVGGGVLEQTPPSHTQG*SLSRRY Trigger: GTACCTGCGACTCAATGACAACCCCTGGGTGTGTGA...GGGTGGCGTTTGTTCCAGAACGCCACCTCCCACCCGGATCGCGGTATATAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS TCA 90 bp | GTGTGCAGGTGGCCCAGGCCGTGGAACGTGGTAGGGTCCACGACATaGAGCTGTGCATTATCACTAAGATCTAGTTGCTCCAGGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCRWPRPWNVVGSTT*SCALSLRSSCSRRV Trigger: GACCCTCCTGGAGCAACTAGATCTTAGTGATAATGCACAGCTTCATGTCGTGGACCCTACCACGTTCCACGGCCTGGGCCACCTGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS TCA 90 bp | AGCCAGCGCATTAGAGTGCAGCCACAGGATAGTGAGATTTCGGCATaGCTGGAAGCTCGCAGCTGGCACGTGAGAGATTCGGTTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SQRIRVQPQDSEISA*LEARSWHVRDSVAM Trigger: CATGGCAACCGAATCTCTCACGTGCCAGCTGCGAGCTTCCAGTCATGCCGAAATCTCACTATCCTGTGGCTGCACTCTAATGCGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 90 bp | AGACCAGTGAAGGCAGCAGCATCGATCCGAGCCAGCGCATTAGAGTaGAGCCACAGGATAGTGAGATTTCGGCATGACTGGAAGCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPVKAAASIRASALE*SHRIVRFRHDWKLA Trigger: TGCGAGCTTCCAGTCATGCCGAAATCTCACTATCCTGTGGCTGCACTCTAATGCGCTGGCTCGGATCGATGCTGCTGCCTTCACTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS TCA 90 bp | AGGATAGTGAGATTTCGGCATGACTGGAAGCTCGCAGCTGGCACGTaGGAGATTCGGTTGCCATGCAGGAAGATTCGCTGGCTAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RIVRFRHDWKLAAGT*EIRLPCRKIRWLEA Trigger: AGCCTCTAGCCAGCGAATCTTCCTGCATGGCAACCGAATCTCTCACGTGCCAGCTGCGAGCTTCCAGTCATGCCGAAATCTCACTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 72 bp | CCGGGACCCAGCTCCCGCAGGCCACATCGGTCTAGGTaGAGTGTGTGCAGGTGGCCCAGGCCGTGGAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGPSSRRPHRSR*SVCRWPRPWNV Trigger: CACGTTCCACGGCCTGGGCCACCTGCACACACTGCACCTAGACCGATGTGGCCTGCGGGAGCTGGGTCCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 72 bp | CACTTCCCGCCTGGCCCAGACGGCAGTGGCTGCGGGTaGGATTCTTCCGGGAACAACCTGGCCTCCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HFPPGPDGSGCG*DSSGNNLASCG Trigger: CCCGCAGGAGGCCAGGTTGTTCCCGGAAGAATCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCGGGAAGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 72 bp | TGGCCCCACTTCCCGCCTGGCCCAGACGGCAGTGGCTaGGGGTGCGATTCTTCCGGGAACAACCTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WPHFPPGPDGSG*GCDSSGNNLAS Trigger: GGAGGCCAGGTTGTTCCCGGAAGAATCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCGGGAAGTGGGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 72 bp | TCCGGGAACAACCTGGCCTCCTGCGGGGACCAGTGGTaGGAAGTCCTGGTGGCTCGGAACCCCCAGGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGNNLASCGDQW*EVLVARNPQAA Trigger: TGCGGCCTGGGGGTTCCGAGCCACCAGGACTTCCCACCACTGGTCCCCGCAGGAGGCCAGGTTGTTCCCGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 72 bp | TCTGCGTCCCCTGTTCCACTGGCCCCACTTCCCGCCTaGCCCAGACGGCAGTGGCTGCGGGTGCGATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SASPVPLAPLPA*PRRQWLRVRFF Trigger: GAAGAATCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCGGGAAGTGGGGCCAGTGGAACAGGGGACGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 72 bp | AGCTCCCGCAGGCCACATCGGTCTAGGTGCAGTGTGTaGAGGTGGCCCAGGCCGTGGAACGTGGTAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRRPHRSRCSV*RWPRPWNVVGS Trigger: GGACCCTACCACGTTCCACGGCCTGGGCCACCTGCACACACTGCACCTAGACCGATGTGGCCTGCGGGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS GCA 72 bp | TGCGGGTGCGATTCTTCCGGGAACAACCTGGCCTCCTaGGGGGACCAGTGGTGGGAAGTCCTGGTGGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CGCDSSGNNLAS*GDQWWEVLVAR Trigger: CCGAGCCACCAGGACTTCCCACCACTGGTCCCCGCAGGAGGCCAGGTTGTTCCCGGAAGAATCGCACCCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CCA 72 bp | GCAGTGGCTGCGGGTGCGATTCTTCCGGGAACAACCTaGCCTCCTGCGGGGACCAGTGGTGGGAAGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVAAGAILPGTT*PPAGTSGGKSW Trigger: CCAGGACTTCCCACCACTGGTCCCCGCAGGAGGCCAGGTTGTTCCCGGAAGAATCGCACCCGCAGCCACTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
||
| CDS CAA 72 bp | TTGCCTGGTGGAGTGTCACCGGGAGGCACACGTCCCTaGAGGGCGTTTCCGGCAGAAGCTGGCCTCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LPGGVSPGGTRP*RAFPAEAGLPG Trigger: ACCCGGGAGGCCAGCTTCTGCCGGAAACGCCCTCAAGGGACGTGTGCCTCCCGGTGACACTCCACCAGGCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CCA 72 bp | CGCAGGCCACATCGGTCTAGGTGCAGTGTGTGCAGGTaGCCCAGGCCGTGGAACGTGGTAGGGTCCACGACA | + |
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Preference number: 6 (lower is better) Translates to: RRPHRSRCSVCR*PRPWNVVGSTT Trigger: TGTCGTGGACCCTACCACGTTCCACGGCCTGGGCCACCTGCACACACTGCACCTAGACCGATGTGGCCTGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CCA 72 bp | TGGTGGCTCGGAACCCCCAGGCCGCAGGGCAGTCAGTaGGGGCTCTGCAGAGCTGGGCAAAGTTCCAAATGG | + |
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Preference number: 6 (lower is better) Translates to: WWLGTPRPQGSQ*GLCRAGQSSKW Trigger: CCATTTGGAACTTTGCCCAGCTCTGCAGAGCCCCCACTGACTGCCCTGCGGCCTGGGGGTTCCGAGCCACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 90 bp | GCAGCGAGGCGCTTAAGATCACGGTCTGCCAGGCGTTGGGGCAGGTaGCAGGGCACCTCTGATGAGGAACCTCGGAACTTCTGCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AARRLRSRSARRWGR*QGTSDEEPRNFCSQ Trigger: CTGGCTGCAGAAGTTCCGAGGTTCCTCATCAGAGGTGCCCTGCAACCTGCCCCAACGCCTGGCAGACCGTGATCTTAAGCGCCTCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 72 bp | TCCAAAGTACCAGTGCAAGGCCCAGAGGAGCAAGGCTaGAGGCCAGAGCAGGCAGAGCCCCTGAACCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SKVPVQGPEEQG*RPEQAEPLNPL Trigger: CAGAGGGTTCAGGGGCTCTGCCTGCTCTGGCCTGCAGCCTTGCTCCTCTGGGCCTTGCACTGGTACTTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CCA 72 bp | GAGGGTCATGAGGCGGCCAAGGTCCCGGAAGGCATGTaGGTGCACACGAGCCACATGGTTCTGGTGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: EGHEAAKVPEGM*VHTSHMVLVQE Trigger: CTCTTGCACCAGAACCATGTGGCTCGTGTGCACCCACATGCCTTCCGGGACCTTGGCCGCCTCATGACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CCA 72 bp | GCAGCGAGGCGCTTAAGATCACGGTCTGCCAGGCGTTaGGGCAGGTTGCAGGGCACCTCTGATGAGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: AARRLRSRSARR*GRLQGTSDEEP Trigger: AGGTTCCTCATCAGAGGTGCCCTGCAACCTGCCCCAACGCCTGGCAGACCGTGATCTTAAGCGCCTCGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS TCA 72 bp | CACTTGGGGAGGCTCAGCAGCTCCTCATCAGTGAGCTaGCTGGTCTGGATGGGACGGAAGGGTCCTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: HLGRLSSSSSVS*LVWMGRKGPEA Trigger: GGCTTCAGGACCCTTCCGTCCCATCCAGACCAGTCAGCTCACTGATGAGGAGCTGCTGAGCCTCCCCAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 72 bp | AGGAGGCGGTCAAGACTGTGCAGGCCACGGAAAGCGTaGTCAGGCACACTGGGGATACGGTTGCCATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RRRSRLCRPRKA*SGTLGIRLPCR Trigger: TCTGCATGGCAACCGTATCCCCAGTGTGCCTGAGCACGCTTTCCGTGGCCTGCACAGTCTTGACCGCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 72 bp | ACATGGTTCTGGTGCAAGAGGAGGCGGTCAAGACTGTaGAGGCCACGGAAAGCGTGCTCAGGCACACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TWFWCKRRRSRL*RPRKACSGTLG Trigger: CCCCAGTGTGCCTGAGCACGCTTTCCGTGGCCTGCACAGTCTTGACCGCCTCCTCTTGCACCAGAACCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 72 bp | AAGGCATGTGGGTGCACACGAGCCACATGGTTCTGGTaGAAGAGGAGGCGGTCAAGACTGTGCAGGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: KACGCTRATWFW*KRRRSRLCRPR Trigger: CCGTGGCCTGCACAGTCTTGACCGCCTCCTCTTGCACCAGAACCATGTGGCTCGTGTGCACCCACATGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CCA 72 bp | AGGTCCCGGAAGGCATGTGGGTGCACACGAGCCACATaGTTCTGGTGCAAGAGGAGGCGGTCAAGACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RSRKACGCTRAT*FWCKRRRSRLC Trigger: GCACAGTCTTGACCGCCTCCTCTTGCACCAGAACCATGTGGCTCGTGTGCACCCACATGCCTTCCGGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 72 bp | CAGAGTGGACGTGCCCGGCAGTCACACACCCAGGGGTaGTCATTGAGTCGCAGGTACTGCAGAGACCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: QSGRARQSHTQG*SLSRRYCRDLR Trigger: CCTGAGGTCTCTGCAGTACCTGCGACTCAATGACAACCCCTGGGTGTGTGACTGCCGGGCACGTCCACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 90 bp | CTGTGCAGGCCACGGAAAGCGTGCTCAGGCACACTGGGGATACGGTaGCCATGCAGAAAGAGATGCGTGAGGTTGCCCAGGTCTCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LCRPRKACSGTLGIR*PCRKRCVRLPRSRK Trigger: CTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGTGCCTGAGCACGCTTTCCGTGGCCTGCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 90 bp | AAAGTTCCAAATGGAGAGTCATTGATGTGCCGAGGGCCTGAGCCATaGCCTGGTGGAGTGTCACCGGGAGGCACACGTCCCTTGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: KVPNGESLMCRGPEP*PGGVSPGGTRPLRA Trigger: CGCCCTCAAGGGACGTGTGCCTCCCGGTGACACTCCACCAGGCAATGGCTCAGGCCCTCGGCACATCAATGACTCTCCATTTGGAACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 90 bp | AGTGGGGGCTCTGCAGAGCTGGGCAAAGTTCCAAATGGAGAGTCATaGATGTGCCGAGGGCCTGAGCCATTGCCTGGTGGAGTGTCACCG | + |
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Preference number: 6 (lower is better) Translates to: SGGSAELGKVPNGES*MCRGPEPLPGGVSP Trigger: CGGTGACACTCCACCAGGCAATGGCTCAGGCCCTCGGCACATCAATGACTCTCCATTTGGAACTTTGCCCAGCTCTGCAGAGCCCCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 90 bp | TTACCTTGGGCTCATTGTAGCACACACAAGCACCAGGGCATGGTGTaGCTACCCTCCAGGCCTGTAGCCATAACACCCATGCCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LPWAHCSTHKHQGMV*LPSRPVAITPMPAA Trigger: GGCTGCTGGCATGGGTGTTATGGCTACAGGCCTGGAGGGTAGCAACACCATGCCCTGGTGCTTGTGTGTGCTACAATGAGCCCAAGGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 90 bp | GGCACACTGGGGATACGGTTGCCATGCAGAAAGAGATGCGTGAGGTaGCCCAGGTCTCGAAAGGTGTTGTCAGGGAGTGCCTGCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: GTLGIRLPCRKRCVR*PRSRKVLSGSACRL Trigger: CAATCTGCAGGCACTCCCTGACAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS TCA 72 bp | CTGCAGAGCTGGGCAAAGTTCCAAATGGAGAGTCATTaGTGTGCCGAGGGCCTGAGCCATTGCCTGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LQSWAKFQMESH*CAEGLSHCLVE Trigger: CTCCACCAGGCAATGGCTCAGGCCCTCGGCACATCAATGACTCTCCATTTGGAACTTTGCCCAGCTCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 72 bp | AAAGCGTGCTCAGGCACACTGGGGATACGGTTGCCATaGAGAAAGAGATGCGTGAGGTTGCCCAGGTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: KACSGTLGIRLP*RKRCVRLPRSR Trigger: TCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGTGCCTGAGCACGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 72 bp | GGGATACGGTTGCCATGCAGAAAGAGATGCGTGAGGTaGCCCAGGTCTCGAAAGGTGTTGTCAGGGAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: GIRLPCRKRCVR*PRSRKVLSGSA Trigger: GGCACTCCCTGACAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS TCA 72 bp | AGATTTCGGCATGACTGGAAGCTCGCAGCTGGCACGTaGGAGATTCGGTTGCCATGCAGGAAGATTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RFRHDWKLAAGT*EIRLPCRKIRW Trigger: CCAGCGAATCTTCCTGCATGGCAACCGAATCTCTCACGTGCCAGCTGCGAGCTTCCAGTCATGCCGAAATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS TCA 72 bp | CACTGGGGATACGGTTGCCATGCAGAAAGAGATGCGTaGGGTTGCCCAGGTCTCGAAAGGTGTTGTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: HWGYGCHAERDA*GCPGLERCCQG Trigger: TCCCTGACAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 72 bp | GGCACACTGGGGATACGGTTGCCATGCAGAAAGAGATaGGTGAGGTTGCCCAGGTCTCGAAAGGTGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GTLGIRLPCRKR*VRLPRSRKVLS Trigger: TGACAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTTTCTGCATGGCAACCGTATCCCCAGTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS GCA 72 bp | GAGCTGGGCAAAGTTCCAAATGGAGAGTCATTGATGTaGCGAGGGCCTGAGCCATTGCCTGGTGGAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: ELGKVPNGESLM*RGPEPLPGGVS Trigger: TGACACTCCACCAGGCAATGGCTCAGGCCCTCGGCACATCAATGACTCTCCATTTGGAACTTTGCCCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 72 bp | GCTCATTGTAGCACACACAAGCACCAGGGCATGGTGTaGCTACCCTCCAGGCCTGTAGCCATAACACCCATG | + |
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Preference number: 6 (lower is better) Translates to: AHCSTHKHQGMV*LPSRPVAITPM Trigger: CATGGGTGTTATGGCTACAGGCCTGGAGGGTAGCAACACCATGCCCTGGTGCTTGTGTGTGCTACAATGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 72 bp | TCTGCAGAGCTGGGCAAAGTTCCAAATGGAGAGTCATaGATGTGCCGAGGGCCTGAGCCATTGCCTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SAELGKVPNGES*MCRGPEPLPGG Trigger: TCCACCAGGCAATGGCTCAGGCCCTCGGCACATCAATGACTCTCCATTTGGAACTTTGCCCAGCTCTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS TCA 72 bp | ATTAGAGTGCAGCCACAGGATAGTGAGATTTCGGCATaGCTGGAAGCTCGCAGCTGGCACGTGAGAGATTCG | + |
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Preference number: 6 (lower is better) Translates to: IRVQPQDSEISA*LEARSWHVRDS Trigger: CGAATCTCTCACGTGCCAGCTGCGAGCTTCCAGTCATGCCGAAATCTCACTATCCTGTGGCTGCACTCTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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| CDS CAA 72 bp | AAGAGATGCGTGAGGTTGCCCAGGTCTCGAAAGGTGTaGTCAGGGAGTGCCTGCAGATTGTTGTCTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: KRCVRLPRSRKV*SGSACRLLSCR Trigger: CCTACAAGACAACAATCTGCAGGCACTCCCTGACAACACCTTTCGAGACCTGGGCAACCTCACGCATCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059589.6 |
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