Pregenerated sensors for RTN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020458Ensembl transcript IDs: ENSMUST00000060992.6, ENSMUST00000078830.11, ENSMUST00000102841.8, ENSMUST00000102842.10, ENSMUST00000102843.10, ENSMUST00000170731.8
Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGCCAACTTATTAATGCCTTACATCAACCCACTAGCAGGTTGCTaGGTCCTCAGTAGAGCCCTATGCAGCCCTGATTCTGTTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: HANLLMPYINPLAGC*VLSRALCSPDSVFC Trigger: ACAGAAAACAGAATCAGGGCTGCATAGGGCTCTACTGAGGACCCAGCAACCTGCTAGTGGGTTGATGTAAGGCATTAATAAGTTGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR GCA 90 bp | TTACACGCCAACTTATTAATGCCTTACATCAACCCACTAGCAGGTTaGTGGGTCCTCAGTAGAGCCCTATGCAGCCCTGATTCTGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: LHANLLMPYINPLAG*WVLSRALCSPDSVF Trigger: GAAAACAGAATCAGGGCTGCATAGGGCTCTACTGAGGACCCAGCAACCTGCTAGTGGGTTGATGTAAGGCATTAATAAGTTGGCGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR GCA 90 bp | GTTTTATATCCATTAAGTGCCTTCAAAGTTCCCAGTTGTGTGGGCTaGTGCCTCACCTCCCATGTCGTCTTCTTCCTTCACATGGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: VLYPLSAFKVPSCVG*CLTSHVVFFLHMVL Trigger: TAGCACCATGTGAAGGAAGAAGACGACATGGGAGGTGAGGCAGCAGCCCACACAACTGGGAACTTTGAAGGCACTTAATGGATATAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR GCA 90 bp | TTATATCCATTAAGTGCCTTCAAAGTTCCCAGTTGTGTGGGCTGCTaGCTCACCTCCCATGTCGTCTTCTTCCTTCACATGGTGCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LYPLSAFKVPSCVGC*LTSHVVFFLHMVLK Trigger: TTTTAGCACCATGTGAAGGAAGAAGACGACATGGGAGGTGAGGCAGCAGCCCACACAACTGGGAACTTTGAAGGCACTTAATGGATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR TCA 90 bp | ATTCTCTTCCTAGTTTATGTGCTTGGGACTACACTGTATAACCAATaGCTCAGAGGTCAAGCACTGTGGGGCAGCTGCAAGGTTAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: ILFLVYVLGTTLYNQ*LRGQALWGSCKVKD Trigger: ATCTTTAACCTTGCAGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAACTAGGAAGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR TCA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGACCCAGGGCTCACCCCTaGCCCGCCCACCCCGTAACC | + |
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Preference number: 2 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGPRAHP*PAHPVT Trigger: GGTTACGGGGTGGGCGGGTCAGGGGTGAGCCCTGGG...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR TCA 90 bp | GACAGATTTTTCCACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCACCCAGGGCTCACCCCTaGCCCGCCCACCCCGTAACC | + |
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Preference number: 2 (lower is better) Translates to: DRFFHSALVVCSSKHLISPRAHP*PAHPVT Trigger: GGTTACGGGGTGGGCGGGTCAGGGGTGAGCCCTGGG...TGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTGGAAAAATCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR TCA 90 bp | CTCCCATGTCGTCTTCTTCCTTCACATGGTGCTAAAACTTCAAAACTGAGGAGGGGGAAAGCTCCAGTGTaGCGAGTGAGCTGTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPCRLLPSHGAKTSKLRRGKAPV*RVSCLA Trigger: AGCAAGACAGCTCACTCGTCACACTGGAGCTTTCCC...CCTCCTCAGTTTTGAAGTTTTAGCACCATGTGAAGGAAGAAGACGACATGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR GCA 90 bp | CTCCCATGTCGTCTTCTTCCTTCACATGGTGCTAAAACTTCAAAACTGAGGAGGGCACTGTGGGGCAGCTaGAAGGTTAAAGATCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LPCRLLPSHGAKTSKLRRALWGS*KVKDLS Trigger: GCTTAGATCTTTAACCTTGCAGCTGCCCCACAGTGC...CCTCCTCAGTTTTGAAGTTTTAGCACCATGTGAAGGAAGAAGACGACATGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR TCA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGAACTGCTAAAAATAACTaGAACTGCACGGCCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGTAKNN*NCTATQ Trigger: CTGGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGT...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGCCTTTATTCACCAAGTaGCTCATCTGGGGAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: MCLGLHCITNDSEVKHCGPLFTK*LIWGKQ Trigger: TTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGG...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR TCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTACTGCTAAAAATAACTaGAACTGCACGGCCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: FMCLGLHCITNDSEVKHCTAKNN*NCTATQ Trigger: CTGGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGT...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGCAGATTTTTCCACTCTaGTTTAGTAGTATGCTCATC | + |
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Preference number: 2 (lower is better) Translates to: MCLGLHCITNDSEVKHCGQIFPL*FSSMLI Trigger: GATGAGCATACTACTAAAGCAGAGTGGAAAAATCTG...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCACTGGACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTCTCAGTAGAGCCCTATaGAGCCCTGATTCTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: MFTGHNVSWKHLSTEIPCLSRAL*SPDSVF Trigger: GAAAACAGAATCAGGGCTGCATAGGGCTCTACTGAG...ACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGTCCAGTGAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR TCA 90 bp | GATTACACATTAAGCTATTTTACACGCCAACTTATTAATGCCTTACATCAACCCAGCCCTATGCAGCCCTaGTTCTGTTTTCTGTACCTG | + |
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Preference number: 2 (lower is better) Translates to: DYTLSYFTRQLINALHQPSPMQP*FCFLYL Trigger: CAGGTACAGAAAACAGAATCAGGGCTGCATAGGGCT...GGGTTGATGTAAGGCATTAATAAGTTGGCGTGTAAAATAGCTTAATGTGTAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCACTGGACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTACGAGTGAGCTGTCTTaGTGTTTAGTTTACACCCTC | + |
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Preference number: 2 (lower is better) Translates to: MFTGHNVSWKHLSTEIPCTSELS*CLVYTL Trigger: GAGGGTGTAAACTAAACAGCAAGACAGCTCACTCGT...ACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGTCCAGTGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR TCA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCAACTGCTAAAAATAACTaGAACTGCACGGCCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: HSALVVCSSKHLISEKSATAKNN*NCTATQ Trigger: CTGGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGT...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR GCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTCAGATTTTTCCACTCTaGTTTAGTAGTATGCTCATC | + |
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Preference number: 2 (lower is better) Translates to: FMCLGLHCITNDSEVKHCQIFPL*FSSMLI Trigger: GATGAGCATACTACTAAAGCAGAGTGGAAAAATCTG...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| 3UTR-3UTR GCA 90 bp | GATTACACATTAAGCTATTTTACACGCCAACTTATTAATGCCTTACATCAACCCCCTTTATTCACCAAGTaGCTCATCTGGGGAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: DYTLSYFTRQLINALHQPPLFTK*LIWGKQ Trigger: TTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGG...GGGTTGATGTAAGGCATTAATAAGTTGGCGTGTAAAATAGCTTAATGTGTAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR TCA 90 bp | GATTACACATTAAGCTATTTTACACGCCAACTTATTAATGCCTTACATCAACCCAAACACAGTACACTGTaGAAAGGGTTGTTTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: DYTLSYFTRQLINALHQPKHSTL*KGLFFL Trigger: CAGGAAAAACAACCCTTTTCACAGTGTACTGTGTTT...GGGTTGATGTAAGGCATTAATAAGTTGGCGTGTAAAATAGCTTAATGTGTAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCACTGGACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTACCGTGTTTTTGCTGTaGATTCATGAAACTAAAACA | + |
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Preference number: 2 (lower is better) Translates to: MFTGHNVSWKHLSTEIPCTVFLL*IHETKT Trigger: TGTTTTAGTTTCATGAATGCACAGCAAAAACACGGT...ACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGTCCAGTGAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR GCA 72 bp | CCATTAAGTGCCTTCAAAGTTCCCAGTTGTGTGGGCTaGTGCCTCACCTCCCATGTCGTCTTCTTCCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: PLSAFKVPSCVG*CLTSHVVFFLH Trigger: GTGAAGGAAGAAGACGACATGGGAGGTGAGGCAGCAGCCCACACAACTGGGAACTTTGAAGGCACTTAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR TCA 72 bp | CAACACGGAAAGCAGGGAAAGCTCCAGTGTGACGAGTaGGCTGTCTTGCTGTTTAGTTTACACCCTCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QHGKQGKLQCDE*AVLLFSLHPLG Trigger: CCCAAGAGGGTGTAAACTAAACAGCAAGACAGCTCACTCGTCACACTGGAGCTTTCCCTGCTTTCCGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR GCA 72 bp | TTAAGTGCCTTCAAAGTTCCCAGTTGTGTGGGCTGCTaGCTCACCTCCCATGTCGTCTTCTTCCTTCACATG | + |
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Preference number: 3 (lower is better) Translates to: LSAFKVPSCVGC*LTSHVVFFLHM Trigger: CATGTGAAGGAAGAAGACGACATGGGAGGTGAGGCAGCAGCCCACACAACTGGGAACTTTGAAGGCACTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR CCA 72 bp | TTATTAATGCCTTACATCAACCCACTAGCAGGTTGCTaGGTCCTCAGTAGAGCCCTATGCAGCCCTGATTCT | + |
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Preference number: 3 (lower is better) Translates to: LLMPYINPLAGC*VLSRALCSPDS Trigger: AGAATCAGGGCTGCATAGGGCTCTACTGAGGACCCAGCAACCTGCTAGTGGGTTGATGTAAGGCATTAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR CAA 90 bp | CTCCCATGTCGTCTTCTTCCTTCACATGGTGCTAAAACTTCAAAACTGAGGAGGTTAGTTTACACCCTCTaGGGTAGGACTGGCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: LPCRLLPSHGAKTSKLRRLVYTL*GRTGLA Trigger: AGCCAAGCCAGTCCTACCCAAGAGGGTGTAAACTAA...CCTCCTCAGTTTTGAAGTTTTAGCACCATGTGAAGGAAGAAGACGACATGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR TCA 72 bp | GAGTTTCTCCAGTCAGTTGTCGGACAGAATGTGACTTaGCGACTATTAGTTAAGAAGGCTGATGGGAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: EFLQSVVGQNVT*RLLVKKADGSW Trigger: CCAACTCCCATCAGCCTTCTTAACTAATAGTCGTCAAGTCACATTCTGTCCGACAACTGACTGGAGAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR TCA 72 bp | AACCTCTTGAACATATTCCCCACTGTAAGGAGTATTTaGGTTTCTCCAGTCAGTTGTCGGACAGAATGTGAC | + |
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Preference number: 3 (lower is better) Translates to: NLLNIFPTVRSI*VSPVSCRTECD Trigger: GTCACATTCTGTCCGACAACTGACTGGAGAAACTCAAATACTCCTTACAGTGGGGAATATGTTCAAGAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR CAA 90 bp | ATGTTCACTGGACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTCACTGTAAGGAGTATTaGAGTTTCTCCAGTCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: MFTGHNVSWKHLSTEIPCHCKEY*SFSSQL Trigger: CAACTGACTGGAGAAACTCAAATACTCCTTACAGTG...ACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGTCCAGTGAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR GCA 72 bp | TGTCCACTCTCTAAGCCTACCACCGTGTTTTTGCTGTaGATTCATGAAACTAAAACACTAAACACAAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: CPLSKPTTVFLL*IHETKTLNTKV Trigger: TACCTTTGTGTTTAGTGTTTTAGTTTCATGAATGCACAGCAAAAACACGGTGGTAGGCTTAGAGAGTGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR-3UTR CAA 90 bp | GATTACACATTAAGCTATTTTACACGCCAACTTATTAATGCCTTACATCAACCCGAGTTCTATGTTCTCTaGAAAACAGGTGGTAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: DYTLSYFTRQLINALHQPEFYVL*KTGGSA Trigger: AGCGCTACCACCTGTTTTCAAGAGAACATAGAACTC...GGGTTGATGTAAGGCATTAATAAGTTGGCGTGTAAAATAGCTTAATGTGTAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR CCA 72 bp | TGTATTTTAAGAATGTTCACTGGACACAATGTAAGTTaGAAGCACTTAAGTACAGAAATACCCTGTTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: CILRMFTGHNVS*KHLSTEIPCLP Trigger: TGGCAAACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGTCCAGTGAACATTCTTAAAATACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| 3UTR TCA 72 bp | CAGTCCACAAAATCAACTATACATACAGTAAATCTTTaGAATGACGGTTACGTTGGAGTTCTATGTTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QSTKSTIHTVNL*NDGYVGVLCSL Trigger: AAGAGAACATAGAACTCCAACGTAACCGTCATTTCAAAGATTTACTGTATGTATAGTTGATTTTGTGGACTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR GCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGCTTGGAGGGCAGGACTaGGGCAGCGGGCGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLLGGQD*GSGRQG Trigger: TCCCTGCCGCCCGCTGCCGCAGTCCTGCCCTCCAAG...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACGTCCTCCGGGAGCTTaGAGGGCAGGACTGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLRPPGA*RAGLRQ Trigger: CTGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACG...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR TCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTCACGAACTGGTACTTaGAAGCGGGCGGGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLSRTGT*KRAGAG Trigger: CCCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGA...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR TCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATCACGAACTGGTACTTaGAAGCGGGCGGGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLSRTGT*KRAGAG Trigger: CCCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR GCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGCTTGGAGGGCAGGACTaGGGCAGCGGGCGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLLGGQD*GSGRQG Trigger: TCCCTGCCGCCCGCTGCCGCAGTCCTGCCCTCCAAG...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR GCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTGGCAGCGGTGCACGTaGTCCCCGAAACCCCGACAA | + |
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Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLWQRCT*SPKPRQ Trigger: TTGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCA...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS-3UTR TCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGTCACGAACTGGTACTTaGAAGCGGGCGGGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGSRTGT*KRAGAG Trigger: CCCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGA...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR GCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTCTTGGAGGGCAGGACTaGGGCAGCGGGCGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFLGGQD*GSGRQG Trigger: TCCCTGCCGCCCGCTGCCGCAGTCCTGCCCTCCAAG...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR TCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGAAGGGTCTCATCCACTaGGCCCGAGCCCCTGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGKGLIH*ARAPAL Trigger: AAGCGCAGGGGCTCGGGCTCAGTGGATGAGACCCTT...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR TCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTAAGGGTCTCATCCACTaGGCCCGAGCCCCTGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFKGLIH*ARAPAL Trigger: AAGCGCAGGGGCTCGGGCTCAGTGGATGAGACCCTT...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGACCTTCAGGCATGGTTaGCACTACTGCCTCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLTFRHG*HYCLSH Trigger: GTGACTGAGGCAGTAGTGGCAACCATGCCTGAAGGT...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTAGCAGCAGGAATAAGCTaGCACCAAACACCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLAAGIS*HQTPLQ Trigger: CTGGAGTGGTGTTTGGTGCCAGCTTATTCCTGCTGC...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTGCAGCAGGAATAAGCTaGCACCAAACACCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCAAGIS*HQTPLQ Trigger: CTGGAGTGGTGTTTGGTGCCAGCTTATTCCTGCTGC...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTCGTCCTCCGGGAGCTTaGAGGGCAGGACTGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMCLGLHCITNDSEVKHCRPPGA*RAGLRQ Trigger: CTGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACG...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTAGTCCTTCACAAGTTCTaGGGTCCTGGGGAAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLVLHKF*GPGERS Trigger: GCTTCTTTCCCCAGGACCCCAGAACTTGTGAAGGAC...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGGTCCTTCACAAGTTCTaGGGTCCTGGGGAAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLVLHKF*GPGERS Trigger: GCTTCTTTCCCCAGGACCCCAGAACTTGTGAAGGAC...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTATCAGGCAAAACTGGTaGCGGAGTTGCTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCIRQNW*RSCFSF Trigger: GAAGCTGAAGCAACTCCGTCACCAGTTTTGCCTGAT...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | ATGTTCACTGGACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTCTTGGAGGGCAGGACTaGGGCAGCGGGCGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MFTGHNVSWKHLSTEIPCLGGQD*GSGRQG Trigger: TCCCTGCCGCCCGCTGCCGCAGTCCTGCCCTCCAAG...ACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGTCCAGTGAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
||
| CDS-3UTR TCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATGGGTGGCCTTCATCTaGTTTCTGGATAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLWVAFI*FLDSLD Trigger: ATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGATTCCAAATATGCCCTaGATGGGTGGCCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLIPNMP*MGGLHL Trigger: CAGATGAAGGCCACCCATTCAGGGCATATTTGGAAT...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTATTCCAAATATGCCCTaGATGGGTGGCCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCIPNMP*MGGLHL Trigger: CAGATGAAGGCCACCCATTCAGGGCATATTTGGAAT...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTCACTATCCTTCCCATaGCCTTTTTGCTCCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLSLSFP*PFCSRL Trigger: TAGCCTGGAGCAAAAAGGTCATGGGAAGGATAGTGA...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGACCTTCAGGCATGGTTaGCACTACTGCCTCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLTFRHG*HYCLSH Trigger: GTGACTGAGGCAGTAGTGGCAACCATGCCTGAAGGT...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATATGCCCTGAATGGGTaGCCTTCATCTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLYALNG*PSSDFW Trigger: CCAGAAATCAGATGAAGGCCACCCATTCAGGGCATA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACCAGGGATTTTTGCTTaGATTTTGGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLPGIFA*ILAMAS Trigger: GGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGG...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTAGATGGGAAATCCTCTTaGCCAGACGAAACAGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLDGKSS*PDETVL Trigger: TAACACTGTTTCGTCTGGTCAAGAGGATTTCCCATC...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTGACTCTTGTGGATTATaGAGGGCTGCACTACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCDSCGL*RAALQT Trigger: AGTTTGTAGTGCAGCCCTTCATAATCCACAAGAGTC...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGGACTCTTGTGGATTATaGAGGGCTGCACTACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLDSCGL*RAALQT Trigger: AGTTTGTAGTGCAGCCCTTCATAATCCACAAGAGTC...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGATCAGGCAAAACTGGTaGCGGAGTTGCTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGIRQNW*RSCFSF Trigger: GAAGCTGAAGCAACTCCGTCACCAGTTTTGCCTGAT...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGCAATCCAGGGATTTTTaGTTGGATTTTGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLQSRDF*LDFGHG Trigger: GCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTG...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR GCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACAATCCAGGGATTTTTaGTTGGATTTTGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLQSRDF*LDFGHG Trigger: GCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTG...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | ACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTTTGCCACATTTCGTCCTCCGGGAGCTTaGAGGGCAGGACTGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKLEALKYRNTLFATFRPPGA*RAGLRQ Trigger: CTGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACG...AAATGTGGCAAACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
||
| CDS-3UTR CCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTCGAAACAGTGTTACCTaGCTGCTCCTTCAAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCRNSVT*LLLQIH Trigger: ATGGATTTGAAGGAGCAGCCAGGTAACACTGTTTCG...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTAGTGCTACACTCATaGCTTCTTCATATGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCLVLHS*LLHMVG Trigger: CCCCACCATATGAAGAAGCCATGAGTGTAGCACTAA...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGTGGGTGGCCTTCATCTaGTTTCTGGATAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLWVAFI*FLDSLD Trigger: ATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCA...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTTGGGTGGCCTTCATCTaGTTTCTGGATAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGLHCITNDSEVKHCGAAWVAFI*FLDSLD Trigger: ATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCA...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTTCACTATCCTTCCCATaGCCTTTTTGCTCCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGLHCITNDSEVKHCGAASLSFP*PFCSRL Trigger: TAGCCTGGAGCAAAAAGGTCATGGGAAGGATAGTGA...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGAGCTTCTGCTTCCTaGGCAGCTGCATTAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLGASAS*AAALKL Trigger: AAGTTTTAATGCAGCTGCTCAGGAAGCAGAAGCTCC...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTACCCACATCAACACTaGAAACTTCAGGGAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCYPHQH*KLQGIN Trigger: GTTGATTCCCTGAAGTTTGCAGTGTTGATGTGGGTA...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCACAGGGAAAATGTTTaGTGCAGTACTCTCGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGHRENV*CSTLGC Trigger: GCAACCGAGAGTACTGCAGCAAACATTTTCCCTGTG...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTCACAGGGAAAATGTTTaGTGCAGTACTCTCGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHCITNDSEVKHCGAAHRENV*CSTLGC Trigger: GCAACCGAGAGTACTGCAGCAAACATTTTCCCTGTG...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTACAGAAGCACCAGTaGTTGGAAGGAGAGAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLLQKHQ*LEGENL Trigger: TAAATTCTCTCCTTCCAAGCACTGGTGCTTCTGTAG...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATATATAAGGAGCTTCTaGTTCCTGAGCAGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLYIRSF*FLSSCI Trigger: AATGCAGCTGCTCAGGAAGCAGAAGCTCCTTATATA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTGCAGCAGGAATAAGCTaGCACCAAACACCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFAAGIS*HQTPLQ Trigger: CTGGAGTGGTGTTTGGTGCCAGCTTATTCCTGCTGC...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTTATGCCCTGAATGGGTaGCCTTCATCTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLHCITNDSEVKHCGAAYALNG*PSSDFW Trigger: CCAGAAATCAGATGAAGGCCACCCATTCAGGGCATA...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTTATGCCCTGAATGGGTaGCCTTCATCTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNQGSVPFKDECLLFYALNG*PSSDFW Trigger: CCAGAAATCAGATGAAGGCCACCCATTCAGGGCATA...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTCCAGGGATTTTTGCTTaGATTTTGGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNQGSVPFKDECLLFPGIFA*ILAMAS Trigger: GGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGG...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTCCAGGGATTTTTGCTTaGATTTTGGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHCITNDSEVKHCGAAPGIFA*ILAMAS Trigger: GGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGG...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGCCAGGGATTTTTGCTTaGATTTTGGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLPGIFA*ILAMAS Trigger: GGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGG...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCACGTCCTCCGGGAGCTTaGAGGGCAGGACTGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSALVVCSSKHLISEKSARPPGA*RAGLRQ Trigger: CTGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACG...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATTCAAACAGGACAGATaGGAAATCCTCTTGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLFKQDR*EILLTR Trigger: TCTGGTCAAGAGGATTTCCCATCTGTCCTGTTTGAA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTGTTTTCTACTAACATaGCTGACTCTCCTTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLCFLLT*LTLLLG Trigger: CCCCAAAAGGAGAGTCAGCCATGTTAGTAGAAAACA...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGCTTCTTCATATGGTaGGGGATTTTCAGGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNQGSVPFKDECLLFGFFIW*GIFRLK Trigger: CTTGAGCCTGAAAATCCCCCACCATATGAAGAAGCC...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGGCTTCTTCATATGGTaGGGGATTTTCAGGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGGFFIW*GIFRLK Trigger: CTTGAGCCTGAAAATCCCCCACCATATGAAGAAGCC...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTATTGTGCTGTTCACATaGCCAAGAGCAGAATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCIVLFT*PRAELL Trigger: TAGTAATTCTGCTCTTGGTCATGTGAACAGCACAAT...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCATCACGAACTGGTACTTaGAAGCGGGCGGGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSALVVCSSKHLISEKSASRTGT*KRAGAG Trigger: CCCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGA...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTCAATCCAGGGATTTTTaGTTGGATTTTGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPQSRDF*LDFGHG Trigger: GCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTG...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTCATCTGATTTCTaGATAGCTTGGATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGPSSDF*IAWITP Trigger: GGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGG...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGCCTTCATCTGATTTCTaGATAGCTTGGATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGPSSDF*IAWITP Trigger: GGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGG...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGCCAGGGATTTTTGCTTaGATTTTGGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MCLGLHCITNDSEVKHCGPGIFA*ILAMAS Trigger: GGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGG...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGCAATCTTTGTACCTGTaGCTTCGTTCAGTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLQSLYL*LRSVHF Trigger: AAAGTGAACTGAACGAAGCCACAGGTACAAAGATTG...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTAGTGCTACACTCATaGCTTCTTCATATGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPLVLHS*LLHMVG Trigger: CCCCACCATATGAAGAAGCCATGAGTGTAGCACTAA...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGCACTGGACCTACTTTTaGAGAATTCATCTGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLHWTYF*RIHLRH Trigger: ATGTCTCAGATGAATTCTCCAAAAGTAGGTCCAGTG...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTTGGGTGGCCTTCATCTaGTTTCTGGATAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFWVAFI*FLDSLD Trigger: ATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCA...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGCACAGGTGCTACCACTaGCATTTTCATTTCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLHRCYH*HFHFIK Trigger: TTTAATGAAATGAAAATGTCAGTGGTAGCACCTGTG...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTCACAGGTGCTACCACTaGCATTTTCATTTCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCHRCYH*HFHFIK Trigger: TTTAATGAAATGAAAATGTCAGTGGTAGCACCTGTG...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGCTTTCACATGCTTCCTaGACTAAATCTGGCGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGLSHAS*TKSGVR Trigger: TCTAACGCCAGATTTAGTTCAGGAAGCATGTGAAAG...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGTTTATTCAGCTCTGCTaGCAATACAGCTGTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MCLGLHCITNDSEVKHCGFIQLC*QYSCQG Trigger: TCCCTGACAGCTGTATTGTCAGCAGAGCTGAATAAA...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGTACCCACATCAACACTaGAAACTTCAGGGAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGYPHQH*KLQGIN Trigger: GTTGATTCCCTGAAGTTTGCAGTGTTGATGTGGGTA...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTACCCACATCAACACTaGAAACTTCAGGGAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPYPHQH*KLQGIN Trigger: GTTGATTCCCTGAAGTTTGCAGTGTTGATGTGGGTA...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGCAATCCAGGGATTTTTaGTTGGATTTTGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: MCLGLHCITNDSEVKHCGQSRDF*LDFGHG Trigger: GCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTG...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTCTACAGAAGCACCAGTaGTTGGAAGGAGAGAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPLQKHQ*LEGENL Trigger: TAAATTCTCTCCTTCCAAGCACTGGTGCTTCTGTAG...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTTATATAAGGAGCTTCTaGTTCCTGAGCAGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNQGSVPFKDECLLFYIRSF*FLSSCI Trigger: AATGCAGCTGCTCAGGAAGCAGAAGCTCCTTATATA...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGCAGCAGGAATAAGCTaGCACCAAACACCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMCLGLHCITNDSEVKHCAAGIS*HQTPLQ Trigger: CTGGAGTGGTGTTTGGTGCCAGCTTATTCCTGCTGC...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTAGATTTCTGGATAGCTTaGATCACACCCTTATATATC | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLDFWIA*ITPLYI Trigger: GATATATAAGGGTGTGATCCAAGCTATCCAGAAATC...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCATGTCGTCTTCTTCCTTCACATGGTGCTAAAACTTCAAAACTGAGGAGGTATGCCCTGAATGGGTaGCCTTCATCTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPCRLLPSHGAKTSKLRRYALNG*PSSDFW Trigger: CCAGAAATCAGATGAAGGCCACCCATTCAGGGCATA...CCTCCTCAGTTTTGAAGTTTTAGCACCATGTGAAGGAAGAAGACGACATGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
||
| CDS-3UTR CCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTCCAGGGATTTTTGCTTaGATTTTGGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFPGIFA*ILAMAS Trigger: GGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGG...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGCGAAACAGTGTTACCTaGCTGCTCCTTCAAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MCLGLHCITNDSEVKHCGRNSVT*LLLQIH Trigger: ATGGATTTGAAGGAGCAGCCAGGTAACACTGTTTCG...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGTTCAAACAGGACAGATaGGAAATCCTCTTGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGFKQDR*EILLTR Trigger: TCTGGTCAAGAGGATTTCCCATCTGTCCTGTTTGAA...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGTGTTTTCTACTAACATaGCTGACTCTCCTTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGCFLLT*LTLLLG Trigger: CCCCAAAAGGAGAGTCAGCCATGTTAGTAGAAAACA...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACCATGCTTGTTCAAATaGCTTAAAATCTGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: LTRPPRNQGSVPFKDECLPCLFK*LKICIL Trigger: GAGTATGCAGATTTTAAGCCATTTGAACAAGCATGG...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| 3UTR CAA 72 bp | AGTTTTATATCCATTAAGTGCCTTCAAAGTTCCCAGTaGTGTGGGCTGCTGCCTCACCTCCCATGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFISIKCLQSSQ*CGLLPHLPCRL Trigger: AAGACGACATGGGAGGTGAGGCAGCAGCCCACACAACTGGGAACTTTGAAGGCACTTAATGGATATAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
||
| CDS-3UTR TCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGATTGTGCTGTTCACATaGCCAAGAGCAGAATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGIVLFT*PRAELL Trigger: TAGTAATTCTGCTCTTGGTCATGTGAACAGCACAAT...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGATTGTGCTGTTCACATaGCCAAGAGCAGAATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLIVLFT*PRAELL Trigger: TAGTAATTCTGCTCTTGGTCATGTGAACAGCACAAT...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTTCCTACCTCCTGAGGTaGAGCACTAAGTCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FMCLGLHCITNDSEVKHCSYLLR*STKSLL Trigger: AAGGAGAGACTTAGTGCTTCACCTCAGGAGGTAGGA...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTCCTACCTCCTGAGGTaGAGCACTAAGTCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPSYLLR*STKSLL Trigger: AAGGAGAGACTTAGTGCTTCACCTCAGGAGGTAGGA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTCAATTCTTTTATTGTaGTGTTCACATGACCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLSILLL*CSHDQE Trigger: CTCTTGGTCATGTGAACAGCACAATAAAAGAATTGA...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR GCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTCAATCCAGGGATTTTTaGTTGGATTTTGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFQSRDF*LDFGHG Trigger: GCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTG...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGTACAAATGGATTTGTTaGCCTCTCTGGCAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLYKWIC*PLWQFS Trigger: AGAGAATTGCCAGAGAGGGCAACAAATCCATTTGTA...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTACAAATGGATTTGTTaGCCTCTCTGGCAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPYKWIC*PLWQFS Trigger: AGAGAATTGCCAGAGAGGGCAACAAATCCATTTGTA...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTCCTTCATCTGATTTCTaGATAGCTTGGATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFPSSDF*IAWITP Trigger: GGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGG...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CCA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTCAATCTTTGTACCTGTaGCTTCGTTCAGTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPQSLYL*LRSVHF Trigger: AAAGTGAACTGAACGAAGCCACAGGTACAAAGATTG...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTCTTTTTGGTCAATGTTaGAATTTCATTAGATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCLFGQC*NFIRCS Trigger: GCTGCATCTAATGAAATTCCAACATTGACCAAAAAG...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGCAATTTCACTTTTGTTaGATACTTCTAGGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRPPRNQGSVPFKDECLLQFHFC*ILLGQC Trigger: ACACTGACCTAGAAGTATCCAACAAAAGTGAAATTG...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGCACTGGACCTACTTTTaGAGAATTCATCTGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PPRNQGSVPFKDECLLFGHWTYF*RIHLRH Trigger: ATGTCTCAGATGAATTCTCCAAAAGTAGGTCCAGTG...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTGGGTGGCCTTCATCTaGTTTCTGGATAGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPWVAFI*FLDSLD Trigger: ATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCATTCCAAATATGCCCTaGATGGGTGGCCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPIPNMP*MGGLHL Trigger: CAGATGAAGGCCACCCATTCAGGGCATATTTGGAAT...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTATTCCAAATATGCCCTaGATGGGTGGCCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FMCLGLHCITNDSEVKHCIPNMP*MGGLHL Trigger: CAGATGAAGGCCACCCATTCAGGGCATATTTGGAAT...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCAGTACTCTCGGTTGCTaGGCTAAAGGAATCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPSTLGC*AKGITG Trigger: ACCTGTGATTCCTTTAGCTCAGCAACCGAGAGTACT...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGTTTGGAGAATTCATCTaGGACATGTGCTTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLFGEFI*DMCFIF Trigger: AAAGATGAAGCACATGTCTCAGATGAATTCTCCAAA...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGATTTATTCAGCTCTGCTaGCAATACAGCTGTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGFIQLC*QYSCQG Trigger: TCCCTGACAGCTGTATTGTCAGCAGAGCTGAATAAA...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR GCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTTACCCACATCAACACTaGAAACTTCAGGGAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFYPHQH*KLQGIN Trigger: GTTGATTCCCTGAAGTTTGCAGTGTTGATGTGGGTA...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR GCA 90 bp | CTCCCATGTCGTCTTCTTCCTTCACATGGTGCTAAAACTTCAAAACTGAGGAGGTACCCACATCAACACTaGAAACTTCAGGGAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPCRLLPSHGAKTSKLRRYPHQH*KLQGIN Trigger: GTTGATTCCCTGAAGTTTGCAGTGTTGATGTGGGTA...CCTCCTCAGTTTTGAAGTTTTAGCACCATGTGAAGGAAGAAGACGACATGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| CDS-3UTR CCA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTGATTTCTGGATAGCTTaGATCACACCCTTATATATC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHCITNDSEVKHCGAADFWIA*ITPLYI Trigger: GATATATAAGGGTGTGATCCAAGCTATCCAGAAATC...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGATTTCTGGATAGCTTaGATCACACCCTTATATATC | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNQGSVPFKDECLLFDFWIA*ITPLYI Trigger: GATATATAAGGGTGTGATCCAAGCTATCCAGAAATC...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR CCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTATGCCCTGAATGGGTaGCCTTCATCTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPYALNG*PSSDFW Trigger: CCAGAAATCAGATGAAGGCCACCCATTCAGGGCATA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTTATGCCCTGAATGGGTaGCCTTCATCTGATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FMCLGLHCITNDSEVKHCYALNG*PSSDFW Trigger: CCAGAAATCAGATGAAGGCCACCCATTCAGGGCATA...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGCCAATTCCTCTGATATaGCAACTTCAGATTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLPIPLI*QLQIPN Trigger: ATTTGGAATCTGAAGTTGCCATATCAGAGGAATTGG...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR CCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGCTCTCTATTTACAAATaGATTTGTTGCCCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MCLGLHCITNDSEVKHCGLSIYK*ICCPLW Trigger: CCAGAGAGGGCAACAAATCCATTTGTAAATAGAGAG...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR TCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTATTGTGCTGTTCACATaGCCAAGAGCAGAATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFIVLFT*PRAELL Trigger: TAGTAATTCTGCTCTTGGTCATGTGAACAGCACAAT...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR TCA 90 bp | CTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGATCAGTACTCTCGGTTGCTaGGCTAAAGGAATCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYSPSASSGENKYDYNEISTLGC*AKGITG Trigger: ACCTGTGATTCCTTTAGCTCAGCAACCGAGAGTACT...GATCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR TCA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGAGGAGCTTCTGCTTCCTaGGCAGCTGCATTAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRGASAS*AAALKL Trigger: AAGTTTTAATGCAGCTGCTCAGGAAGCAGAAGCTCC...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR TCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTCTCAGACACTTCAGTaGGACTCTCCTTCATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPSQTLQ*DSPSLA Trigger: TGCTAATGAAGGAGAGTCTCACTGAAGTGTCTGAGA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR GCA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGTCAATTCTTTTATTGTaGTGTTCACATGACCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGSILLL*CSHDQE Trigger: CTCTTGGTCATGTGAACAGCACAATAAAAGAATTGA...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR GCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTACAGTGTTACCTGGCTaGTCCTTCAAATCCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFTVLPG*SFKSII Trigger: AATTATGGATTTGAAGGAGCAGCCAGGTAACACTGT...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR GCA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTAGGAAGTTTTTCCTCTaGTTCTTTCGTAAGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLHCITNDSEVKHCGAARKFFL*FFRKYF Trigger: AAAGTACTTACGAAAGAAGCAGAGGAAAAACTTCCT...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | ACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTTTGCCACATTTGCAGCAGGAATAAGCTaGCACCAAACACCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQCKLEALKYRNTLFATFAAGIS*HQTPLQ Trigger: CTGGAGTGGTGTTTGGTGCCAGCTTATTCCTGCTGC...AAATGTGGCAAACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
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| CDS-3UTR CCA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGAGTCCATTGTCTTTTCTaGAGACATAACTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGVHCLF*RHNSVF Trigger: GAAGACGGAGTTATGTCTCCAGAAAAGACAATGGAC...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTCTTTTTGGTCAATGTTaGAATTTCATTAGATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPLFGQC*NFIRCS Trigger: GCTGCATCTAATGAAATTCCAACATTGACCAAAAAG...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTCATCTATTATCTCAATaGGAGATGAATCGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNQGSVPFKDECLLFHLLSQ*EMNRKM Trigger: CATTTTCCGATTCATCTCCCATTGAGATAATAGATG...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | ATGTTCACTGGACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTATTCCAAATATGCCCTaGATGGGTGGCCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: MFTGHNVSWKHLSTEIPCIPNMP*MGGLHL Trigger: CAGATGAAGGCCACCCATTCAGGGCATATTTGGAAT...ACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGTCCAGTGAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
||
| CDS-3UTR TCA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTTTTGGAGAATTCATCTaGGACATGTGCTTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNQGSVPFKDECLLFGAFFGEFI*DMCFIF Trigger: AAAGATGAAGCACATGTCTCAGATGAATTCTCCAAA...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTACCCACATCAACACTaGAAACTTCAGGGAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPYPHQH*KLQGIN Trigger: GTTGATTCCCTGAAGTTTGCAGTGTTGATGTGGGTA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGACAATCCAGGGATTTTTaGTTGGATTTTGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRQSRDF*LDFGHG Trigger: GCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTG...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGATCCCTTCATCTGATTTCTaGATAGCTTGGATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSPSASSGENKYDYNEIPSSDF*IAWITP Trigger: GGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGG...GATCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGCAATTTCACTTTTGTTaGATACTTCTAGGTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MCLGLHCITNDSEVKHCGQFHFC*ILLGQC Trigger: ACACTGACCTAGAAGTATCCAACAAAAGTGAAATTG...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCAAACTTCGTGCTGGAATaGGAACCAGCGACTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSALVVCSSKHLISEKSANFVLE*EPATWQ Trigger: CTGCCAAGTCGCTGGTTCCCATTCCAGCACGAAGTT...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
||
| CDS-3UTR CCA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGAGATTTCTGGATAGCTTaGATCACACCCTTATATATC | + |
|
Preference number: 4 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGDFWIA*ITPLYI Trigger: GATATATAAGGGTGTGATCCAAGCTATCCAGAAATC...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGACCAATTCCTCTGATATaGCAACTTCAGATTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGPIPLI*QLQIPN Trigger: ATTTGGAATCTGAAGTTGCCATATCAGAGGAATTGG...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | GACAGATTTTTCCACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAATTCCAAATATGCCCTaGATGGGTGGCCTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRFFHSALVVCSSKHLISIPNMP*MGGLHL Trigger: CAGATGAAGGCCACCCATTCAGGGCATATTTGGAAT...TGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTGGAAAAATCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | CTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGATCATTGTGCTGTTCACATaGCCAAGAGCAGAATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: LYSPSASSGENKYDYNEIIVLFT*PRAELL Trigger: TAGTAATTCTGCTCTTGGTCATGTGAACAGCACAAT...GATCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCGATTTCTGGATAGCTTaGATCACACCCTTATATATC | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPDFWIA*ITPLYI Trigger: GATATATAAGGGTGTGATCCAAGCTATCCAGAAATC...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCCCAATTCCTCTGATATaGCAACTTCAGATTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPPIPLI*QLQIPN Trigger: ATTTGGAATCTGAAGTTGCCATATCAGAGGAATTGG...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCCCATGCTTGTTCAAATaGCTTAAAATCTGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPPCLFK*LKICIL Trigger: GAGTATGCAGATTTTAAGCCATTTGAACAAGCATGG...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| 3UTR CAA 72 bp | TTTGAAATGACGGTTACGTTGGAGTTCTATGTTCTCTaGAAAACAGGTGGTAGCGCTCCTACAAATACATTC | + |
|
Preference number: 4 (lower is better) Translates to: FEMTVTLEFYVL*KTGGSAPTNTF Trigger: GAATGTATTTGTAGGAGCGCTACCACCTGTTTTCAAGAGAACATAGAACTCCAACGTAACCGTCATTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | GACAGATTTTTCCACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCATCTCAGACACTTCAGTaGGACTCTCCTTCATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRFFHSALVVCSSKHLISSQTLQ*DSPSLA Trigger: TGCTAATGAAGGAGAGTCTCACTGAAGTGTCTGAGA...TGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTGGAAAAATCTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTTCAATTCTTTTATTGTaGTGTTCACATGACCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FMCLGLHCITNDSEVKHCSILLL*CSHDQE Trigger: CTCTTGGTCATGTGAACAGCACAATAAAAGAATTGA...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR GCA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTCAATTCTTTTATTGTaGTGTTCACATGACCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NFSSNSALLKITETARPPSILLL*CSHDQE Trigger: CTCTTGGTCATGTGAACAGCACAATAAAAGAATTGA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGATGTTGTGACATAATCTaGCTCAGAATCATGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRCCDII*LRIMYC Trigger: GCAATACATGATTCTGAGGCAGATTATGTCACAACA...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTAGGAAGTTTTTCCTCTaGTTCTTTCGTAAGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FMCLGLHCITNDSEVKHCRKFFL*FFRKYF Trigger: AAAGTACTTACGAAAGAAGCAGAGGAAAAACTTCCT...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGACCAATTCCTCTGATATaGCAACTTCAGATTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRPIPLI*QLQIPN Trigger: ATTTGGAATCTGAAGTTGCCATATCAGAGGAATTGG...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR TCA 90 bp | GACAGATTTTTCCACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCACTTTCACATGCTTCCTaGACTAAATCTGGCGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRFFHSALVVCSSKHLISLSHAS*TKSGVR Trigger: TCTAACGCCAGATTTAGTTCAGGAAGCATGTGAAAG...TGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTGGAAAAATCTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCAGTCCATTGTCTTTTCTaGAGACATAACTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSALVVCSSKHLISEKSAVHCLF*RHNSVF Trigger: GAAGACGGAGTTATGTCTCCAGAAAAGACAATGGAC...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | GACAGATTTTTCCACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGATTTCTGGATAGCTTaGATCACACCCTTATATATC | + |
|
Preference number: 4 (lower is better) Translates to: DRFFHSALVVCSSKHLISDFWIA*ITPLYI Trigger: GATATATAAGGGTGTGATCCAAGCTATCCAGAAATC...TGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTGGAAAAATCTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR GCA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCATCAATTCTTTTATTGTaGTGTTCACATGACCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSALVVCSSKHLISEKSASILLL*CSHDQE Trigger: CTCTTGGTCATGTGAACAGCACAATAAAAGAATTGA...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CCA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCACATCTATTATCTCAATaGGAGATGAATCGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: HSALVVCSSKHLISEKSAHLLSQ*EMNRKM Trigger: CATTTTCCGATTCATCTCCCATTGAGATAATAGATG...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS GCA 90 bp | AACTTCGTGCTGGAATGGGAACCAGCGACTTGGCAGCGGTGCACGTaGTCCCCGAAACCCCGACAAACAATGAAGGCACCCAGGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NFVLEWEPATWQRCT*SPKPRQTMKAPRLP Trigger: CGGAAGCCTGGGTGCCTTCATTGTTTGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCAAGTCGCTGGTTCCCATTCCAGCACGAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS-3UTR CAA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATCGTCCTCCGGGAGCTaGGAGGGCAGGACTGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTRPPRNQGSVPFKDECLSSSGS*EGRTAA Trigger: TGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACGA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR CAA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTAGTCACGAACTGGTACTaGAAAGCGGGCGGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LTRPPRNQGSVPFKDECLVTNWY*KAGGGR Trigger: CCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGAC...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS CCA 90 bp | CTGCTGATAGGCGAGAACTTCGTGCTGGAATGGGAACCAGCGACTTaGCAGCGGTGCACGTGCTCCCCGAAACCCCGACAAACAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLIGENFVLEWEPAT*QRCTCSPKPRQTMK Trigger: CTTCATTGTTTGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCAAGTCGCTGGTTCCCATTCCAGCACGAAGTTCTCGCCTATCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS-3UTR CAA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTTCGTCCTCCGGGAGCTaGGAGGGCAGGACTGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPPRNQGSVPFKDECLLFSSSGS*EGRTAA Trigger: TGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACGA...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR CAA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGTCACGAACTGGTACTaGAAAGCGGGCGGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPPRNQGSVPFKDECLLFVTNWY*KAGGGR Trigger: CCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGAC...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR CAA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGTCGTCCTCCGGGAGCTaGGAGGGCAGGACTGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MCLGLHCITNDSEVKHCGSSSGS*EGRTAA Trigger: TGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACGA...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGGACCTTCAGGCATGGTaGCCACTACTGCCTCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRPPRNQGSVPFKDECLLDLQAW*PLLPQS Trigger: TGACTGAGGCAGTAGTGGCAACCATGCCTGAAGGTC...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTGACCTTCAGGCATGGTaGCCACTACTGCCTCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCDLQAW*PLLPQS Trigger: TGACTGAGGCAGTAGTGGCAACCATGCCTGAAGGTC...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGGCACAGGGAAAATGTTaGCTGCAGTACTCTCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TRPPRNQGSVPFKDECLLAQGKC*LQYSRL Trigger: CAACCGAGAGTACTGCAGCAAACATTTTCCCTGTGC...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATCCAGGGATTTTTGCTaGGATTTTGGCCATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LTRPPRNQGSVPFKDECLSRDFC*DFGHGI Trigger: GATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGAGTCACGAACTGGTACTaGAAAGCGGGCGGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRVTNWY*KAGGGR Trigger: CCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGAC...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGAAACTGGTGACGGAGTaGCTTCAGCTTCCTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TRPPRNQGSVPFKDECLLKLVTE*LQLPQM Trigger: CATTTGAGGAAGCTGAAGCAACTCCGTCACCAGTTT...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGCCTTTTGGGGAGCCATaGAAAGATGATCCCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TRPPRNQGSVPFKDECLLPFGEP*KDDPIS Trigger: AGAAATGGGATCATCTTTCAATGGCTCCCCAAAAGG...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTTCCCATGACCTTTTaGCTCCAGGCTATCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTRPPRNQGSVPFKDECLLPMTF*LQAIFK Trigger: TTTGAAGATAGCCTGGAGCAAAAAGGTCATGGGAAG...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGTCCAGGGATTTTTGCTaGGATTTTGGCCATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLSRDFC*DFGHGI Trigger: GATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGA...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CAA 90 bp | GACAGATTTTTCCACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCATCGTCCTCCGGGAGCTaGGAGGGCAGGACTGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRFFHSALVVCSSKHLISSSSGS*EGRTAA Trigger: TGCCGCAGTCCTGCCCTCCAAGCTCCCGGAGGACGA...TGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTGGAAAAATCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTACAAATGGATTTGTaGCCCTCTCTGGCAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAHPVTKGVSPLKMNVYCLQMDL*PSLAIL Trigger: GAGAATTGCCAGAGAGGGCAACAAATCCATTTGTAA...ACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTAAACTGGTGACGGAGTaGCTTCAGCTTCCTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: RPPRNQGSVPFKDECLLFKLVTE*LQLPQM Trigger: CATTTGAGGAAGCTGAAGCAACTCCGTCACCAGTTT...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS TCA 90 bp | GGAAGAGAGGCAGCAGTTTCAAACAGGACAGATGGGAAATCCTCTTaGCCAGACGAAACAGTGTTACCTGGCTGCTCCTTCAAATCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GREAAVSNRTDGKSS*PDETVLPGCSFKSI Trigger: TATGGATTTGAAGGAGCAGCCAGGTAACACTGTTTCGTCTGGTCAAGAGGATTTCCCATCTGTCCTGTTTGAAACTGCTGCCTCTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS CCA 90 bp | AGGTCACAGGGCAATTCTGAGCAAGGCAACGAATTGGCCCCGCTCTaGACATTAGCAATTTCACTTTTGTTGGATACTTCTAGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSQGNSEQGNELAPL*TLAISLLLDTSRSV Trigger: CACTGACCTAGAAGTATCCAACAAAAGTGAAATTGCTAATGTCCAGAGCGGGGCCAATTCGTTGCCTTGCTCAGAATTGCCCTGTGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGTCAATCCAGGGATTTTaGCTTGGATTTTGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLSIQGF*LGFWPW Trigger: CCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGA...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTTCAATCCAGGGATTTTaGCTTGGATTTTGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLHCITNDSEVKHCGAASIQGF*LGFWPW Trigger: CCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGA...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTCAATCCAGGGATTTTaGCTTGGATTTTGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPSIQGF*LGFWPW Trigger: CCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGA...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CAA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTGCACAGGGAAAATGTTaGCTGCAGTACTCTCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNQGSVPFKDECLLFGAFAQGKC*LQYSRL Trigger: CAACCGAGAGTACTGCAGCAAACATTTTCCCTGTGC...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGACATCACAGCCTCCTCTaGTGTTTGTGGGACTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGHHSLL*CLWDFR Trigger: CCTGAAGTCCCACAAACACAAGAGGAGGCTGTGATG...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | ACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTCTTTCGTAAGTACTTaGGGTTTAACTATGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRPPRNQGSVPFKDECLLSFVST*GLTMLP Trigger: GGGCAACATAGTTAAACCCAAAGTACTTACGAAAGA...CAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGTCAATCCAGGGATTTTaGCTTGGATTTTGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: MCLGLHCITNDSEVKHCGSIQGF*LGFWPW Trigger: CCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGA...CCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTTTACAAATGGATTTGTaGCCCTCTCTGGCAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPPRNQGSVPFKDECLLFLQMDL*PSLAIL Trigger: GAGAATTGCCAGAGAGGGCAACAAATCCATTTGTAA...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTATTTCACTTCCCATGCTaGTTCAAATGGCTTAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LTRPPRNQGSVPFKDECLFHFPC*FKWLKI Trigger: GATTTTAAGCCATTTGAACAAGCATGGGAAGTGAAA...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CTGACCCGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTTCTCTGTTATAATTaGGGCCTTCCTTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LTRPPRNQGSVPFKDECLLLCYN*GLPFFY Trigger: ATAGAAGAAAGGAAGGCCCAAATTATAACAGAGAAG...TAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCGGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGAAAGGATTTGACGTTTaGGGGCTAGTCTTCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPRNQGSVPFKDECLLFGKGFDV*GLVFSV Trigger: AACAGAGAAGACTAGCCCCAAAACGTCAAATCCTTT...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGAAAGGATTTGACGTTTaGGGGCTAGTCTTCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGKGFDV*GLVFSV Trigger: AACAGAGAAGACTAGCCCCAAAACGTCAAATCCTTT...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGCTCCTTATGTTTGTGTaGTGTTACTGTCTCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: PPRNQGSVPFKDECLLFGLLMFV*CYCLRH Trigger: GTGTCTGAGACAGTAACACAACACAAACATAAGGAG...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTCTCCTTATGTTTGTGTaGTGTTACTGTCTCAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RPPRNQGSVPFKDECLLFLLMFV*CYCLRH Trigger: GTGTCTGAGACAGTAACACAACACAAACATAAGGAG...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGACACTGGACCTACTTTaGGAGAATTCATCTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGTLDLL*ENSSET Trigger: TGTCTCAGATGAATTCTCCAAAAGTAGGTCCAGTGT...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGACACTGGACCTACTTTaGGAGAATTCATCTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PPRNQGSVPFKDECLLFGTLDLL*ENSSET Trigger: TGTCTCAGATGAATTCTCCAAAAGTAGGTCCAGTGT...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 90 bp | ATCTTTGTACCTGTGGCTTCGTTCAGTTCACTTTCACATGCTTCCTaGACTAAATCTGGCGTTAGACCTTCAGGCATGGTTGCCACTACT | + |
|
Preference number: 5 (lower is better) Translates to: IFVPVASFSSLSHAS*TKSGVRPSGMVATT Trigger: AGTAGTGGCAACCATGCCTGAAGGTCTAACGCCAGATTTAGTTCAGGAAGCATGTGAAAGTGAACTGAACGAAGCCACAGGTACAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTCAATTCTTTTATaGTGCTGTTCACATGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: PPRNQGSVPFKDECLLFGASILL*CCSHDQ Trigger: TTGGTCATGTGAACAGCACAATAAAAGAATTGAGGC...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CAA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTTCATAAGCAATCTTaGTACCTGTGGCTTCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPFHKQS*YLWLRS Trigger: TGAACGAAGCCACAGGTACAAAGATTGCTTATGAAA...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGTTTCATAAGCAATCTTaGTACCTGTGGCTTCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HPVTKGVSPLKMNVYCLGFHKQS*YLWLRS Trigger: TGAACGAAGCCACAGGTACAAAGATTGCTTATGAAA...CCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGACATCACAGCCTCCTCTaGTGTTTGTGGGACTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRHHSLL*CLWDFR Trigger: CCTGAAGTCCCACAAACACAAGAGGAGGCTGTGATG...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | TTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGGGGCAGCTGCAATTTCACTTTTGTaGGATACTTCTAGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGLHCITNDSEVKHCGAAAISLL*DTSRSV Trigger: CACTGACCTAGAAGTATCCAACAAAAGTGAAATTGC...AGCTGCCCCACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CGCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTTTAGGATATGTATTCTaGAAAGAAAGGTCACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPRNQGSVPFKDECLLFLGYVF*KERSQG Trigger: GCCCTGTGACCTTTCTTTCAAGAATACATATCCTAA...AAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | GCCCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGTTGCCCATTTCTATTaGAGATTCCAAAGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AHPVTKGVSPLKMNVYCLVAHFY*RFQSRN Trigger: GTTTCTGCTTTGGAATCTCAAATAGAAATGGGCAAC...CAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTGTTGCCCATTTCTATTaGAGATTCCAAAGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPVAHFY*RFQSRN Trigger: GTTTCTGCTTTGGAATCTCAAATAGAAATGGGCAAC...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGAAGATGGGAAATCCTCTaGACCAGACGAAACAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGRWEIL*TRRNSV Trigger: AACACTGTTTCGTCTGGTCAAGAGGATTTCCCATCT...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CCACCCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGTATTTACAAATGGATTaGTTGCCCTCTCTGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: PPRNQGSVPFKDECLLFGYLQMD*LPSLAI Trigger: AATTGCCAGAGAGGGCAACAAATCCATTTGTAAATA...CCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGACCTTTTGGGGAGCCATaGAAAGATGATCCCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGPFGEP*KDDPIS Trigger: AGAAATGGGATCATCTTTCAATGGCTCCCCAAAAGG...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CCCGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTCTTCTCTGTTATAATTaGGGCCTTCCTTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PVTKGVSPLKMNVYCLGPLLCYN*GLPFFY Trigger: ATAGAAGAAAGGAAGGCCCAAATTATAACAGAGAAG...AGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 90 bp | GAGCTCACAGTGATCAGGCACCGACTTCTCAAATTTTGCTATTTCTaGATAATTAGAGAACTCTGGACTTGGCTCAGTGGAGAGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ELTVIRHRLLKFCYF*IIRELWTWLSGELC Trigger: ACAAAGCTCTCCACTGAGCCAAGTCCAGAGTTCTCTAATTATTCAGAAATAGCAAAATTTGAGAAGTCGGTGCCTGATCACTGTGAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 90 bp | ATCTTTAGGATATGTATTCTTGAAAGAAAGGTCACAGGGCAATTCTaGGCAAGGCAACGAATTGGCCCCGCTCTGGACATTAGCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFRICILERKVTGQF*ARQRIGPALDISNF Trigger: GAAATTGCTAATGTCCAGAGCGGGGCCAATTCGTTGCCTTGCTCAGAATTGCCCTGTGACCTTTCTTTCAAGAATACATATCCTAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CCA 90 bp | TTTCACATGCTTCCTGAACTAAATCTGGCGTTAGACCTTCAGGCATaGTTGCCACTACTGCCTCAGTCACCTTTGATAAATTATCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHMLPELNLALDLQA*LPLLPQSPLINYLL Trigger: CAACAGATAATTTATCAAAGGTGACTGAGGCAGTAGTGGCAACCATGCCTGAAGGTCTAACGCCAGATTTAGTTCAGGAAGCATGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTGCCTCAATTCTTTTATaGTGCTGTTCACATGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: RNQGSVPFKDECLLFGAFASILL*CCSHDQ Trigger: TTGGTCATGTGAACAGCACAATAAAAGAATTGAGGC...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGATCCAGGGATTTTTGCTaGGATTTTGGCCATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRSRDFC*DFGHGI Trigger: GATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGA...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGATCTCCAGGGATTTTTGCTaGGATTTTGGCCATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LYSPSASSGENKYDYNEISRDFC*DFGHGI Trigger: GATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGA...GATCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTCAATCCAGGGATTTTaGCTTGGATTTTGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: NFSSNSALLKITETARPPSIQGF*LGFWPW Trigger: CCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTAGATGGGAAATCCTCTaGACCAGACGAAACAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FMCLGLHCITNDSEVKHCRWEIL*TRRNSV Trigger: AACACTGTTTCGTCTGGTCAAGAGGATTTCCCATCT...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CGTAACCAAGGGAGTGTCCCCTTTAAAGATGAATGTCTACTGTTTGGGGCCTTTGGACCAAGTCCACTTTaGTTTCATAAGCAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNQGSVPFKDECLLFGAFGPSPL*FHKQSL Trigger: CAAAGATTGCTTATGAAACAAAAGTGGACTTGGTCC...AAAGGCCCCAAACAGTAGACATTCATCTTTAAAGGGGACACTCCCTTGGTTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS CCA 90 bp | TCAGATTCCAAATATGCCCTGAATGGGTGGCCTTCATCTGATTTCTaGATAGCTTGGATCACACCCTTATATATCCTAAAGCTGATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSKYALNGWPSSDF*IAWITPLYILKLIV Trigger: GACTATCAGCTTTAGGATATATAAGGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGGCATATTTGGAATCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS-3UTR CAA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGAGCCTCAATTCTTTTATaGTGCTGTTCACATGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGASILL*CCSHDQ Trigger: TTGGTCATGTGAACAGCACAATAAAAGAATTGAGGC...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | TCCTTTATTCACCAAGTGCCTCATCTGGGGAAAACAAGTATGACTACAATGAGACTTCCCATGACCTTTTaGCTCCAGGCTATCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SFIHQVPHLGKTSMTTMRLPMTF*LQAIFK Trigger: TTTGAAGATAGCCTGGAGCAAAAAGGTCATGGGAAG...TCTCATTGTAGTCATACTTGTTTTCCCCAGATGAGGCACTTGGTGAATAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS TCA 90 bp | GACATAATCTGCCTCAGAATCATGTATTGCTACAAGGAAAGGATTTaGCGTTTTGGGGCTAGTCTTCTCTGTTATAATTTGGGCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DIICLRIMYCYKERI*RFGASLLCYNLGLP Trigger: AGGAAGGCCCAAATTATAACAGAGAAGACTAGCCCCAAAACGTCAAATCCTTTCCTTGTAGCAATACATGATTCTGAGGCAGATTATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS CCA 90 bp | TCTGGACCAAGTCCACTTTTGTTTCATAAGCAATCTTTGTACCTGTaGCTTCGTTCAGTTCACTTTCACATGCTTCCTGAACTAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPSPLLFHKQSLYL*LRSVHFHMLPELNL Trigger: CAGATTTAGTTCAGGAAGCATGTGAAAGTGAACTGAACGAAGCCACAGGTACAAAGATTGCTTATGAAACAAAAGTGGACTTGGTCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTGCCTCAATTCTTTTATaGTGCTGTTCACATGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: FMCLGLHCITNDSEVKHCASILL*CCSHDQ Trigger: TTGGTCATGTGAACAGCACAATAAAAGAATTGAGGC...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | ACACAATGTAAGTTGGAAGCACTTAAGTACAGAAATACCCTGTTTGCCACATTTTCCAGGGATTTTTGCTaGGATTTTGGCCATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TQCKLEALKYRNTLFATFSRDFC*DFGHGI Trigger: GATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGA...AAATGTGGCAAACAGGGTATTTCTGTACTTAAGTGCTTCCAACTTACATTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078830.11 |
||
| CDS-3UTR CAA 90 bp | TATAACACACAGTTTTCCCAGCATCCTTTATTCACCAAGTGCCTCATCTGGGGATATTTACAAATGGATTaGTTGCCCTCTCTGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: YNTQFSQHPLFTKCLIWGYLQMD*LPSLAI Trigger: AATTGCCAGAGAGGGCAACAAATCCATTTGTAAATA...TCCCCAGATGAGGCACTTGGTGAATAAAGGATGCTGGGAAAACTGTGTGTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTTTAGGATATGTATTCTaGAAAGAAAGGTCACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FMCLGLHCITNDSEVKHCLGYVF*KERSQG Trigger: GCCCTGTGACCTTTCTTTCAAGAATACATATCCTAA...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | AATTTTTCCTCAAACAGTGCACTGCTAAAAATAACTGAAACTGCACGGCCACCCTCTTTCGTAAGTACTTaGGGTTTAACTATGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NFSSNSALLKITETARPPSFVST*GLTMLP Trigger: GGGCAACATAGTTAAACCCAAAGTACTTACGAAAGA...GGGTGGCCGTGCAGTTTCAGTTATTTTTAGCAGTGCACTGTTTGAGGAAAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 90 bp | TGGTTGCCACTACTGCCTCAGTCACCTTTGATAAATTATCTGTTGTaGCATAATCTGCCTCAGAATCATGTATTGCTACAAGGAAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WLPLLPQSPLINYLL*HNLPQNHVLLQGKD Trigger: ATCCTTTCCTTGTAGCAATACATGATTCTGAGGCAGATTATGTCACAACAGATAATTTATCAAAGGTGACTGAGGCAGTAGTGGCAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | TTTATGTGCTTGGGACTACACTGTATAACCAATGACTCAGAGGTCAAGCACTGTTTTCACTTCCCATGCTaGTTCAAATGGCTTAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: FMCLGLHCITNDSEVKHCFHFPC*FKWLKI Trigger: GATTTTAAGCCATTTGAACAAGCATGGGAAGTGAAA...ACAGTGCTTGACCTCTGAGTCATTGGTTATACAGTGTAGTCCCAAGCACATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS-3UTR CAA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCAGCCTCAATTCTTTTATaGTGCTGTTCACATGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSALVVCSSKHLISEKSAASILL*CCSHDQ Trigger: TTGGTCATGTGAACAGCACAATAAAAGAATTGAGGC...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | CACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGAAAAATCTGCAGGACCAAGTCCACTTTaGTTTCATAAGCAATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSALVVCSSKHLISEKSAGPSPL*FHKQSL Trigger: CAAAGATTGCTTATGAAACAAAAGTGGACTTGGTCC...TGCAGATTTTTCTGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS-3UTR CAA 90 bp | GACAGATTTTTCCACTCTGCTTTAGTAGTATGCTCATCTAAACATCTCATTTCAGCAATTTCACTTTTGTaGGATACTTCTAGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DRFFHSALVVCSSKHLISAISLL*DTSRSV Trigger: CACTGACCTAGAAGTATCCAACAAAAGTGAAATTGC...TGAAATGAGATGTTTAGATGAGCATACTACTAAAGCAGAGTGGAAAAATCTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS GCA 90 bp | CAACTAAATCATCAACTAAGAAGAGACGCCTCAATTCTTTTATTGTaGTGTTCACATGACCAAGAGCAGAATTACTATATTTCTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: QLNHQLRRDASILLL*CSHDQEQNYYISEP Trigger: TGGTTCAGAAATATAGTAATTCTGCTCTTGGTCATGTGAACAGCACAATAAAAGAATTGAGGCGTCTCTTCTTAGTTGATGATTTAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS TCA 72 bp | CCTCCTCGTCCTCGGGCTCCGTCACGAACTGGTACTTaGAAGCGGGCGGGGGCCGGGGCGGGCTATCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PPRPRAPSRTGT*KRAGAGAGYPR Trigger: CCGCGGATAGCCCGCCCCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGACGGAGCCCGAGGACGAGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
||
| CDS CAA 72 bp | TCCTCCTCGTCCTCGGGCTCCGTCACGAACTGGTACTaGAAAGCGGGCGGGGGCCGGGGCGGGCTATCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSGSVTNWY*KAGGGRGGLSA Trigger: CGCGGATAGCCCGCCCCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGACGGAGCCCGAGGACGAGGAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS CCA 72 bp | TCCTCGTCCTCCTCGTCCTCGGGCTCCGTCACGAACTaGTACTTGAAAGCGGGCGGGGGCCGGGGCGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSGSVTN*YLKAGGGRGGL Trigger: TAGCCCGCCCCGGCCCCCGCCCGCTTTCAAGTACCAGTTCGTGACGGAGCCCGAGGACGAGGAGGACGAGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078830.11 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS CCA 72 bp | GGCGAGAACTTCGTGCTGGAATGGGAACCAGCGACTTaGCAGCGGTGCACGTGCTCCCCGAAACCCCGACAA | + |
|
Preference number: 6 (lower is better) Translates to: GENFVLEWEPAT*QRCTCSPKPRQ Trigger: TTGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCAAGTCGCTGGTTCCCATTCCAGCACGAAGTTCTCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS CAA 72 bp | AGGCGAGAACTTCGTGCTGGAATGGGAACCAGCGACTaGGCAGCGGTGCACGTGCTCCCCGAAACCCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: RRELRAGMGTSD*AAVHVLPETPT Trigger: TGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCAAGTCGCTGGTTCCCATTCCAGCACGAAGTTCTCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS GCA 72 bp | CTGGAATGGGAACCAGCGACTTGGCAGCGGTGCACGTaGTCCCCGAAACCCCGACAAACAATGAAGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LEWEPATWQRCT*SPKPRQTMKAP Trigger: GGGTGCCTTCATTGTTTGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCAAGTCGCTGGTTCCCATTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS CAA 90 bp | GCTGCTGATAGGCGAGAACTTCGTGCTGGAATGGGAACCAGCGACTaGGCAGCGGTGCACGTGCTCCCCGAAACCCCGACAAACAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: AADRRELRAGMGTSD*AAVHVLPETPTNNE Trigger: TTCATTGTTTGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCAAGTCGCTGGTTCCCATTCCAGCACGAAGTTCTCGCCTATCAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS GCA 72 bp | TTCGTGCTGGAATGGGAACCAGCGACTTGGCAGCGGTaGACGTGCTCCCCGAAACCCCGACAAACAATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FVLEWEPATWQR*TCSPKPRQTMK Trigger: CTTCATTGTTTGTCGGGGTTTCGGGGAGCACGTGCACCGCTGCCAAGTCGCTGGTTCCCATTCCAGCACGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102841.8 |
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| CDS TCA 72 bp | GCAGCAGTTTCAAACAGGACAGATGGGAAATCCTCTTaGCCAGACGAAACAGTGTTACCTGGCTGCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAVSNRTDGKSS*PDETVLPGCSF Trigger: GAAGGAGCAGCCAGGTAACACTGTTTCGTCTGGTCAAGAGGATTTCCCATCTGTCCTGTTTGAAACTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CCA 72 bp | ACGCTCTGGAGCCGTCCTTCACAAGTTCTGGGGTCCTaGGGAAAGAAGCATTCTCATTTCTGCTTTCACTAT | + |
|
Preference number: 6 (lower is better) Translates to: TLWSRPSQVLGS*GKKHSHFCFHY Trigger: ATAGTGAAAGCAGAAATGAGAATGCTTCTTTCCCCAGGACCCCAGAACTTGTGAAGGACGGCTCCAGAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | GGCAGCAGTTTCAAACAGGACAGATGGGAAATCCTCTaGACCAGACGAAACAGTGTTACCTGGCTGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSSFKQDRWEIL*TRRNSVTWLLL Trigger: AAGGAGCAGCCAGGTAACACTGTTTCGTCTGGTCAAGAGGATTTCCCATCTGTCCTGTTTGAAACTGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | CACAGGGAAAATGTTTGCTGCAGTACTCTCGGTTGCTaGGCTAAAGGAATCACAGGTGATGTACGCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HRENVCCSTLGC*AKGITGDVRSG Trigger: TCCAGAGCGTACATCACCTGTGATTCCTTTAGCTCAGCAACCGAGAGTACTGCAGCAAACATTTTCCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | GAAAGGTCACAGGGCAATTCTGAGCAAGGCAACGAATaGGCCCCGCTCTGGACATTAGCAATTTCACTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ERSQGNSEQGNE*APLWTLAISLL Trigger: CAAAAGTGAAATTGCTAATGTCCAGAGCGGGGCCAATTCGTTGCCTTGCTCAGAATTGCCCTGTGACCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 90 bp | AGGAAGAGAGGCAGCAGTTTCAAACAGGACAGATGGGAAATCCTCTaGACCAGACGAAACAGTGTTACCTGGCTGCTCCTTCAAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RKRGSSFKQDRWEIL*TRRNSVTWLLLQIH Trigger: ATGGATTTGAAGGAGCAGCCAGGTAACACTGTTTCGTCTGGTCAAGAGGATTTCCCATCTGTCCTGTTTGAAACTGCTGCCTCTCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | CCTGTGGCTTCGTTCAGTTCACTTTCACATGCTTCCTaGACTAAATCTGGCGTTAGACCTTCAGGCATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PVASFSSLSHAS*TKSGVRPSGMV Trigger: AACCATGCCTGAAGGTCTAACGCCAGATTTAGTTCAGGAAGCATGTGAAAGTGAACTGAACGAAGCCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CCA 72 bp | AGAAGGAAGAGAGGCAGCAGTTTCAAACAGGACAGATaGGAAATCCTCTTGACCAGACGAAACAGTGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: RRKRGSSFKQDR*EILLTRRNSVT Trigger: GGTAACACTGTTTCGTCTGGTCAAGAGGATTTCCCATCTGTCCTGTTTGAAACTGCTGCCTCTCTTCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | TCCGTCTTCTTTAACCACTTTAGTAAGGGTCGCAGGTaGCTCTTGTGGATTATGAAGGGCTGCACTACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SVFFNHFSKGRR*LLWIMKGCTTN Trigger: GTTTGTAGTGCAGCCCTTCATAATCCACAAGAGTCACCTGCGACCCTTACTAAAGTGGTTAAAGAAGACGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | TCAGATTCGGGTGAGGAATCATCCACGAGCTCACAGTaGTCAGGCACCGACTTCTCAAATTTTGCTATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SDSGEESSTSSQ*SGTDFSNFAIS Trigger: AGAAATAGCAAAATTTGAGAAGTCGGTGCCTGATCACTGTGAGCTCGTGGATGATTCCTCACCCGAATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | ATATGTATTCTTGAAAGAAAGGTCACAGGGCAATTCTaGGCAAGGCAACGAATTGGCCCCGCTCTGGACATT | + |
|
Preference number: 6 (lower is better) Translates to: ICILERKVTGQF*ARQRIGPALDI Trigger: AATGTCCAGAGCGGGGCCAATTCGTTGCCTTGCTCAGAATTGCCCTGTGACCTTTCTTTCAAGAATACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CCA 72 bp | CTTCCTGAACTAAATCTGGCGTTAGACCTTCAGGCATaGTTGCCACTACTGCCTCAGTCACCTTTGATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LPELNLALDLQA*LPLLPQSPLIN Trigger: ATTTATCAAAGGTGACTGAGGCAGTAGTGGCAACCATGCCTGAAGGTCTAACGCCAGATTTAGTTCAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | GCTTTGCGCTTCAATCCAGGGATTTTTGCTTGGATTTaGGCCATGGCATCCTTAACGCTCTTGTTTGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALRFNPGIFAWI*AMASLTLLFAS Trigger: ACTTGCAAACAAGAGCGTTAAGGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGAAGCGCAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS CAA 90 bp | CAGCACATCCCTACTTCCCTCATAAGTATCTTTCACTTCCCATGCTaGTTCAAATGGCTTAAAATCTGCATACTCTTCCCTCACAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QHIPTSLISIFHFPC*FKWLKICILFPHRC Trigger: GCACCTGTGAGGGAAGAGTATGCAGATTTTAAGCCATTTGAACAAGCATGGGAAGTGAAAGATACTTATGAGGGAAGTAGGGATGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 90 bp | CAAGGCAACGAATTGGCCCCGCTCTGGACATTAGCAATTTCACTTTaGTTGGATACTTCTAGGTCAGTGTACTCCTTAGGAGAATCATCT | + |
|
Preference number: 6 (lower is better) Translates to: QGNELAPLWTLAISL*LDTSRSVYSLGESS Trigger: AGATGATTCTCCTAAGGAGTACACTGACCTAGAAGTATCCAACAAAAGTGAAATTGCTAATGTCCAGAGCGGGGCCAATTCGTTGCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 90 bp | TTCTTGAAAGAAAGGTCACAGGGCAATTCTGAGCAAGGCAACGAATaGGCCCCGCTCTGGACATTAGCAATTTCACTTTTGTTGGATACT | + |
|
Preference number: 6 (lower is better) Translates to: FLKERSQGNSEQGNE*APLWTLAISLLLDT Trigger: AGTATCCAACAAAAGTGAAATTGCTAATGTCCAGAGCGGGGCCAATTCGTTGCCTTGCTCAGAATTGCCCTGTGACCTTTCTTTCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | TCATTCTGCTTTGCGCTTCAATCCAGGGATTTTTGCTaGGATTTTGGCCATGGCATCCTTAACGCTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SFCFALQSRDFC*DFGHGILNALV Trigger: AACAAGAGCGTTAAGGATGCCATGGCCAAAATCCAAGCAAAAATCCCTGGATTGAAGCGCAAAGCAGAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS CAA 72 bp | CCTGAACTAAATCTGGCGTTAGACCTTCAGGCATGGTaGCCACTACTGCCTCAGTCACCTTTGATAAATTAT | + |
|
Preference number: 6 (lower is better) Translates to: PELNLALDLQAW*PLLPQSPLINY Trigger: ATAATTTATCAAAGGTGACTGAGGCAGTAGTGGCAACCATGCCTGAAGGTCTAACGCCAGATTTAGTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | TTGGCCCCGCTCTGGACATTAGCAATTTCACTTTTGTaGGATACTTCTAGGTCAGTGTACTCCTTAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LAPLWTLAISLL*DTSRSVYSLGE Trigger: TTCTCCTAAGGAGTACACTGACCTAGAAGTATCCAACAAAAGTGAAATTGCTAATGTCCAGAGCGGGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | GAATTGGCCCCGCTCTGGACATTAGCAATTTCACTTTaGTTGGATACTTCTAGGTCAGTGTACTCCTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ELAPLWTLAISL*LDTSRSVYSLG Trigger: TCCTAAGGAGTACACTGACCTAGAAGTATCCAACAAAAGTGAAATTGCTAATGTCCAGAGCGGGGCCAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 90 bp | GGCAACGAATTGGCCCCGCTCTGGACATTAGCAATTTCACTTTTGTaGGATACTTCTAGGTCAGTGTACTCCTTAGGAGAATCATCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GNELAPLWTLAISLL*DTSRSVYSLGESSL Trigger: TAAAGATGATTCTCCTAAGGAGTACACTGACCTAGAAGTATCCAACAAAAGTGAAATTGCTAATGTCCAGAGCGGGGCCAATTCGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS TCA 72 bp | TATGTTTGTGTTGTGTTACTGTCTCAGACACTTCAGTaGGACTCTCCTTCATTAGCATCACAGCCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YVCVVLLSQTLQ*DSPSLASQPPL Trigger: AAGAGGAGGCTGTGATGCTAATGAAGGAGAGTCTCACTGAAGTGTCTGAGACAGTAACACAACACAAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS TCA 72 bp | AGATTCCAAATATGCCCTGAATGGGTGGCCTTCATCTaGTTTCTGGATAGCTTGGATCACACCCTTATATAT | + |
|
Preference number: 6 (lower is better) Translates to: RFQICPEWVAFI*FLDSLDHTLIY Trigger: ATATATAAGGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGGCATATTTGGAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS TCA 72 bp | GTGATCAGGCACCGACTTCTCAAATTTTGCTATTTCTaGATAATTAGAGAACTCTGGACTTGGCTCAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VIRHRLLKFCYF*IIRELWTWLSG Trigger: TCCACTGAGCCAAGTCCAGAGTTCTCTAATTATTCAGAAATAGCAAAATTTGAGAAGTCGGTGCCTGATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
||
| CDS CCA 72 bp | AAATATGCCCTGAATGGGTGGCCTTCATCTGATTTCTaGATAGCTTGGATCACACCCTTATATATCCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KYALNGWPSSDF*IAWITPLYILK Trigger: CTTTAGGATATATAAGGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGGCATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS CAA 72 bp | TCTGAGACATGTGCTTCATCTTTAGGATATGTATTCTaGAAAGAAAGGTCACAGGGCAATTCTGAGCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SETCASSLGYVF*KERSQGNSEQG Trigger: GCCTTGCTCAGAATTGCCCTGTGACCTTTCTTTCAAGAATACATATCCTAAAGATGAAGCACATGTCTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 90 bp | GAGAATTCATCTGAGACATGTGCTTCATCTTTAGGATATGTATTCTaGAAAGAAAGGTCACAGGGCAATTCTGAGCAAGGCAACGAATTG | + |
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Preference number: 6 (lower is better) Translates to: ENSSETCASSLGYVF*KERSQGNSEQGNEL Trigger: CAATTCGTTGCCTTGCTCAGAATTGCCCTGTGACCTTTCTTTCAAGAATACATATCCTAAAGATGAAGCACATGTCTCAGATGAATTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | GAAGCATTCTCATTTCTGCTTTCACTATCCTTCCCATaGCCTTTTTGCTCCAGGCTATCTTCAAAGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: EAFSFLLSLSFP*PFCSRLSSKHF Trigger: AAAATGCTTTGAAGATAGCCTGGAGCAAAAAGGTCATGGGAAGGATAGTGAAAGCAGAAATGAGAATGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | CCTACTTCCCTCATAAGTATCTTTCACTTCCCATGCTaGTTCAAATGGCTTAAAATCTGCATACTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PTSLISIFHFPC*FKWLKICILFP Trigger: AGGGAAGAGTATGCAGATTTTAAGCCATTTGAACAAGCATGGGAAGTGAAAGATACTTATGAGGGAAGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS CAA 72 bp | AGCAATAAGGGCACCTTAGATACACTGGACCTACTTTaGGAGAATTCATCTGAGACATGTGCTTCATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SNKGTLDTLDLL*ENSSETCASSL Trigger: TAAAGATGAAGCACATGTCTCAGATGAATTCTCCAAAAGTAGGTCCAGTGTATCTAAGGTGCCCTTATTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | TGCCTCAGAATCATGTATTGCTACAAGGAAAGGATTTaGCGTTTTGGGGCTAGTCTTCTCTGTTATAATTTG | + |
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Preference number: 6 (lower is better) Translates to: CLRIMYCYKERI*RFGASLLCYNL Trigger: CAAATTATAACAGAGAAGACTAGCCCCAAAACGTCAAATCCTTTCCTTGTAGCAATACATGATTCTGAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS TCA 72 bp | CTTAGATACACTGGACCTACTTTTGGAGAATTCATCTaGGACATGTGCTTCATCTTTAGGATATGTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LRYTGPTFGEFI*DMCFIFRICIL Trigger: AAGAATACATATCCTAAAGATGAAGCACATGTCTCAGATGAATTCTCCAAAAGTAGGTCCAGTGTATCTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102841.8 ENSMUST00000102843.10 |
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| CDS GCA 72 bp | CATCAACTAAGAAGAGACGCCTCAATTCTTTTATTGTaGTGTTCACATGACCAAGAGCAGAATTACTATATT | + |
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Preference number: 6 (lower is better) Translates to: HQLRRDASILLL*CSHDQEQNYYI Trigger: AATATAGTAATTCTGCTCTTGGTCATGTGAACAGCACAATAAAAGAATTGAGGCGTCTCTTCTTAGTTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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| CDS CAA 72 bp | AATCATCAACTAAGAAGAGACGCCTCAATTCTTTTATaGTGCTGTTCACATGACCAAGAGCAGAATTACTAT | + |
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Preference number: 6 (lower is better) Translates to: NHQLRRDASILL*CCSHDQEQNYY Trigger: ATAGTAATTCTGCTCTTGGTCATGTGAACAGCACAATAAAAGAATTGAGGCGTCTCTTCTTAGTTGATGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060992.6 ENSMUST00000078830.11 ENSMUST00000102841.8 ENSMUST00000102842.10 ENSMUST00000102843.10 ENSMUST00000170731.8 |
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