Pregenerated sensors for RTN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024758Ensembl transcript IDs: ENSMUST00000025667.14, ENSMUST00000065304.13, ENSMUST00000088169.7, ENSMUST00000088171.12, ENSMUST00000235593.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATaGATCCCAGACCAAGGGCTGTACACGGCCCTCCCAGCCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GRGESTLWNDFSTNT*IPDQGLYTALPAPE Trigger: CTCTGGGGCTGGGAGGGCCGTGTACAGCCCTTGGTCTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR TCA 90 bp | ATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACATaGCTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGC | + |
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Preference number: 1 (lower is better) Translates to: MDLFSQPGLWTPTDT*LAVSGALVLRLKHC Trigger: GCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR TCA 90 bp | AAGGACTCTTGGATGCCAGTTTTCAAGCTGACTGGATTTCCATGCTaGAGGAGAGATGCAAGGTCTGAGAAATTAAGATCCTGGACCCCT | + |
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Preference number: 1 (lower is better) Translates to: KDSWMPVFKLTGFPC*RRDARSEKLRSWTP Trigger: AGGGGTCCAGGATCTTAATTTCTCAGACCTTGCATCTCTCCTTCAGCATGGAAATCCAGTCAGCTTGAAAACTGGCATCCAAGAGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR GCA 90 bp | CTGAGAGTTCTTTCATTAAGGAAGAAGAGGAGCAGTAAGAGTAGCTaGTTATGTGTAAGGCAGGAAGGTGGGACTGGAGGGCCATACAAA | + |
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Preference number: 1 (lower is better) Translates to: LRVLSLRKKRSSKSS*LCVRQEGGTGGPYK Trigger: TTTGTATGGCCCTCCAGTCCCACCTTCCTGCCTTACACATAAGCAGCTACTCTTACTGCTCCTCTTCTTCCTTAATGAAAGAACTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR CCA 90 bp | TCCACTGATGCCACTGTAAGTTCTGTTGTATCTATCAGTACCACCTaGTCTTGCTTGGCCACCCACAACCTAAAAGTTCTGGAAAACACG | + |
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Preference number: 1 (lower is better) Translates to: STDATVSSVVSISTT*SCLATHNLKVLENT Trigger: CGTGTTTTCCAGAACTTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGTACTGATAGATACAACAGAACTTACAGTGGCATCAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR GCA 90 bp | GATGCCACTGTAAGTTCTGTTGTATCTATCAGTACCACCTGGTCTTaGTTGGCCACCCACAACCTAAAAGTTCTGGAAAACACGATCCAA | + |
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Preference number: 1 (lower is better) Translates to: DATVSSVVSISTTWS*LATHNLKVLENTIQ Trigger: TTGGATCGTGTTTTCCAGAACTTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGTACTGATAGATACAACAGAACTTACAGTGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR TCA 90 bp | ATTCCTACTTTTACAGTCACAGAACTTTGTGACCATCAAATACCTTaGAATCCCCAGCTCCTACTTCCTCACAATAGGGCAGGCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: IPTFTVTELCDHQIP*NPQLLLPHNRAGRV Trigger: AACCCTGCCTGCCCTATTGTGAGGAAGTAGGAGCTGGGGATTTCAAGGTATTTGATGGTCACAAAGTTCTGTGACTGTAAAAGTAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR TCA 90 bp | ATTTCATCAATATGTCTGAAAATGGAGATCCTTTTAGAACTGCACTaGCTCCAAGCAGCTGCATGTCCTGCTTCTAGAAATGGACCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ISSICLKMEILLELH*LQAAACPASRNGPL Trigger: AAGAGGTCCATTTCTAGAAGCAGGACATGCAGCTGCTTGGAGTCAGTGCAGTTCTAAAAGGATCTCCATTTTCAGACATATTGATGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR TCA 90 bp | ACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAACTTTGTaGCCATCAAATACCTTGAAATCCCCAGCTCCTACTTCCTCACAA | + |
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Preference number: 1 (lower is better) Translates to: TGKTTNSYFYSHRTL*PSNTLKSPAPTSSQ Trigger: TTGTGAGGAAGTAGGAGCTGGGGATTTCAAGGTATTTGATGGTCACAAAGTTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCTGGCTGCCCTCCTGCTaGCTGCTCCACCCACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: QGEGKAHSGMISQPTHGSWLPSC*LLHPLS Trigger: GGACAGTGGGTGGAGCAGTCAGCAGGAGGGCAGCCA...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGCTGTATACGAGTCCTTaGAACTGGAGAGAGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: WGFGPQAKALQSTGGSSRLYTSP*NWREDP Trigger: AGGGTCCTCTCTCCAGTTCCAAGGACTCGTATACAG...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGCCCCCATTTCTCAGGTaGCATTCTGGGAGTTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: WGFGPQAKALQSTGGSSRPPFLR*HSGSSV Trigger: TACAGAACTCCCAGAATGCCACCTGAGAAATGGGGG...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR CAA 90 bp | AGAAAAGAGCAAACTGTGGAGGCTTCCAGTGCAGAACGAGGTCCCTaGTTAGGAGACCCCATAGACCATGGGTGCGTTCACTTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RKEQTVEASSAERGP*LGDPIDHGCVHFLG Trigger: TCCCAGGAAGTGAACGCACCCATGGTCTATGGGGTCTCCTAACAAGGGACCTCGTTCTGCACTGGAAGCCTCCACAGTTTGCTCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAGCAGGAAGGTGGGACTaGAGGGCCATACAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTAGRWD*RAIQTQ Trigger: TTGGGTTTGTATGGCCCTCCAGTCCCACCTTCCTGC...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCGCAGGAAGGTGGGACTaGAGGGCCATACAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: QGEGKAHSGMISQPTHGSAGRWD*RAIQTQ Trigger: TTGGGTTTGTATGGCCCTCCAGTCCCACCTTCCTGC...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAATGGCTGCCCTCCTGCTaGCTGCTCCACCCACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RFPKGLERRLIPTFTVTEWLPSC*LLHPLS Trigger: GGACAGTGGGTGGAGCAGTCAGCAGGAGGGCAGCCA...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGGGCTGGGAGCCCACATaGAGATTATTTTTCTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: WGFGPQAKALQSTGGSSRGWEPT*RLFFFN Trigger: GTTAAAGAAAAATAATCTGCATGTGGGCTCCCAGCC...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACACTGTATACGAGTCCTTaGAACTGGAGAGAGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTLYTSP*NWREDP Trigger: AGGGTCCTCTCTCCAGTTCCAAGGACTCGTATACAG...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGTGTAAGGCAGGAAGGTaGGACTGGAGGGCCATACAA | + |
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Preference number: 2 (lower is better) Translates to: GEGKAHSGMISQPTHGSQCKAGR*DWRAIQ Trigger: TTGTATGGCCCTCCAGTCCCACCTTCCTGCCTTACA...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCTGTAAGGCAGGAAGGTaGGACTGGAGGGCCATACAA | + |
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Preference number: 2 (lower is better) Translates to: QGEGKAHSGMISQPTHGSCKAGR*DWRAIQ Trigger: TTGTATGGCCCTCCAGTCCCACCTTCCTGCCTTACA...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGCCCCCATTTCTCAGGTaGCATTCTGGGAGTTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GEGKAHSGMISQPTHGSQPPFLR*HSGSSV Trigger: TACAGAACTCCCAGAATGCCACCTGAGAAATGGGGG...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGTGGCTGCCCTCCTGCTaGCTGCTCCACCCACTGTCC | + |
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Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQWLPSC*LLHPLS Trigger: GGACAGTGGGTGGAGCAGTCAGCAGGAGGGCAGCCA...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR GCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGCTCAGGCTAAAGCACTaGAAAGCACAGGAGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQLRLKH*KAQEEA Trigger: TGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAG...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGAATGAACAAACAACTTaGAACCAAACTCTAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: WGFGPQAKALQSTGGSSRNEQTT*NQTLAD Trigger: GTCAGCTAGAGTTTGGTTCCAAGTTGTTTGTTCATT...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCGGGGAAAGCACACTCTaGAATGATTTCTCAACCAAC | + |
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Preference number: 2 (lower is better) Translates to: YMTCSQWGFGPQAKALQSGESTL*NDFSTN Trigger: GTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCC...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAAAGCACACTCTGGAATaGTTTCTCAACCAACACATG | + |
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Preference number: 2 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTKHTLE*FLNQHM Trigger: CATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTT...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCACTCAGGCTAAAGCACTaGAAAGCACAGGAGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPLRLKH*KAQEEA Trigger: TGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAG...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAACTGGATTTCCATGCTaGAGGAGAGATGCAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPTGFPC*RRDARS Trigger: AGACCTTGCATCTCTCCTTCAGCATGGAAATCCAGT...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCGGGCAAAATTATAAATaGGAGCTGTATACGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: YMTCSQWGFGPQAKALQSGQNYK*ELYTSP Trigger: AGGACTCGTATACAGCTCCCATTTATAATTTTGCCC...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAGAGAGATGCAAGGTCTaGGAAATTAAGATCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPERCKV*EIKILD Trigger: GTCCAGGATCTTAATTTCTCAGACCTTGCATCTCTC...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCATGCCAGTTTTCAAGCTaGCTGGATTTCCATGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPCQFSS*LDFHAE Trigger: TTCAGCATGGAAATCCAGTCAGCTTGAAAACTGGCA...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGTGTAAGGCAGGAAGGTaGGACTGGAGGGCCATACAA | + |
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Preference number: 2 (lower is better) Translates to: GSSVSYSELRVLSLRKKRCKAGR*DWRAIQ Trigger: TTGTATGGCCCTCCAGTCCCACCTTCCTGCCTTACA...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGAGGGCAGAGCATGGTaGTGGGAGTGTTGTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQEGRAW*WECCLQ Trigger: CTGTAGACAACACTCCCATCACCATGCTCTGCCCTC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGAATGAACAAACAACTTaGAACCAAACTCTAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GEGKAHSGMISQPTHGSQNEQTT*NQTLAD Trigger: GTCAGCTAGAGTTTGGTTCCAAGTTGTTTGTTCATT...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCAATGAACAAACAACTTaGAACCAAACTCTAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: QGEGKAHSGMISQPTHGSNEQTT*NQTLAD Trigger: GTCAGCTAGAGTTTGGTTCCAAGTTGTTTGTTCATT...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGCAGGAAGGTGGGACTaGAGGGCCATACAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQAGRWD*RAIQTQ Trigger: TTGGGTTTGTATGGCCCTCCAGTCCCACCTTCCTGC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGCAGGAAGGTGGGACTaGAGGGCCATACAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFAGRWD*RAIQTQ Trigger: TTGGGTTTGTATGGCCCTCCAGTCCCACCTTCCTGC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAGAAATGAAGGACTCTTaGATGCCAGTTTTCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPEMKDS*MPVFKL Trigger: CAGCTTGAAAACTGGCATCCAAGAGTCCTTCATTTC...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAACTTTTAGAACTGCACTaGCTCCAAGCAGCTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: RFPKGLERRLIPTFTVTELLELH*LQAAAC Trigger: ACATGCAGCTGCTTGGAGTCAGTGCAGTTCTAAAAG...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| 3UTR-3UTR TCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAACTGGATTTCCATGCTaGAGGAGAGATGCAAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RFPKGLERRLIPTFTVTETGFPC*RRDARS Trigger: AGACCTTGCATCTCTCCTTCAGCATGGAAATCCAGT...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTAGGGCAGGCAGGGTTTaGGAAATGAAGGACTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFRAGRV*EMKDSW Trigger: CCAAGAGTCCTTCATTTCTCAAACCCTGCCTGCCCT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGAATGAACAAACAACTTaGAACCAAACTCTAGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQNEQTT*NQTLAD Trigger: GTCAGCTAGAGTTTGGTTCCAAGTTGTTTGTTCATT...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTACGAGTCCTTGGAACTaGAGAGAGGACCCTAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFTSPWN*REDPRD Trigger: GTCTCTAGGGTCCTCTCTCCAGTTCCAAGGACTCGT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAGGGCAAAATTATAAATaGGAGCTGTATACGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPGQNYK*ELYTSP Trigger: AGGACTCGTATACAGCTCCCATTTATAATTTTGCCC...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAGAGAGATGCAAGGTCTaGGAAATTAAGATCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RFPKGLERRLIPTFTVTEERCKV*EIKILD Trigger: GTCCAGGATCTTAATTTCTCAGACCTTGCATCTCTC...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAAGTCACAGAACTTTGTaGCCATCAAATACCTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPSHRTL*PSNTLK Trigger: TTTCAAGGTATTTGATGGTCACAAAGTTCTGTGACT...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGCTGTATACGAGTCCTTaGAACTGGAGAGAGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQLYTSP*NWREDP Trigger: AGGGTCCTCTCTCCAGTTCCAAGGACTCGTATACAG...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGCCCCCATTTCTCAGGTaGCATTCTGGGAGTTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQPPFLR*HSGSSV Trigger: TACAGAACTCCCAGAATGCCACCTGAGAAATGGGGG...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGACTGGATTTCCATGCTaGAGGAGAGATGCAAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQTGFPC*RRDARS Trigger: AGACCTTGCATCTCTCCTTCAGCATGGAAATCCAGT...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTACTGGATTTCCATGCTaGAGGAGAGATGCAAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFTGFPC*RRDARS Trigger: AGACCTTGCATCTCTCCTTCAGCATGGAAATCCAGT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGAAAAGAGCAAACTGTaGAGGCTTCCAGTGCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFEKSKL*RLPVQN Trigger: GTTCTGCACTGGAAGCCTCCACAGTTTGCTCTTTTC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGAAAAGAGCAAACTGTaGAGGCTTCCAGTGCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQEKSKL*RLPVQN Trigger: GTTCTGCACTGGAAGCCTCCACAGTTTGCTCTTTTC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGTGCCAGTTTTCAAGCTaGCTGGATTTCCATGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQCQFSS*LDFHAE Trigger: TTCAGCATGGAAATCCAGTCAGCTTGAAAACTGGCA...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGGGGCAAAATTATAAATaGGAGCTGTATACGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GSSVSYSELRVLSLRKKRGQNYK*ELYTSP Trigger: AGGACTCGTATACAGCTCCCATTTATAATTTTGCCC...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTAAGCACACTCTGGAATaGTTTCTCAACCAACACATG | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFKHTLE*FLNQHM Trigger: CATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR GCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGGCTGGGAGCCCACATaGAGATTATTTTTCTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQGWEPT*RLFFFN Trigger: GTTAAAGAAAAATAATCTGCATGTGGGCTCCCAGCC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR GCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGGCTGGGAGCCCACATaGAGATTATTTTTCTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFGWEPT*RLFFFN Trigger: GTTAAAGAAAAATAATCTGCATGTGGGCTCCCAGCC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTAGTTTTCAAGCTGACTaGATTTCCATGCTGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFSFQAD*ISMLKE Trigger: CTCCTTCAGCATGGAAATCCAGTCAGCTTGAAAACT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGAAATGAAGGACTCTTaGATGCCAGTTTTCAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQEMKDS*MPVFKL Trigger: CAGCTTGAAAACTGGCATCCAAGAGTCCTTCATTTC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGGGCAAAATTATAAATaGGAGCTGTATACGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFGQNYK*ELYTSP Trigger: AGGACTCGTATACAGCTCCCATTTATAATTTTGCCC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGAGTCACAGAACTTTGTaGCCATCAAATACCTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQSHRTL*PSNTLK Trigger: TTTCAAGGTATTTGATGGTCACAAAGTTCTGTGACT...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTAGTCACAGAACTTTGTaGCCATCAAATACCTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HQFAVLQGPKELLGTTVFSHRTL*PSNTLK Trigger: TTTCAAGGTATTTGATGGTCACAAAGTTCTGTGACT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGAGCACTGTGGATCATaGTATGAACTATTTCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: KTLSCNTETFPIILTQQQEHCGS*YELFHQ Trigger: TTGATGAAATAGTTCATACCATGATCCACAGTGCTC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR CCA 72 bp | AGAACGAGGTCCCTTGTTAGGAGACCCCATAGACCATaGGTGCGTTCACTTCCTGGGAGGGCAGAGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTRSLVRRPHRP*VRSLPGRAEHG Trigger: ACCATGCTCTGCCCTCCCAGGAAGTGAACGCACCCATGGTCTATGGGGTCTCCTAACAAGGGACCTCGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR CCA 72 bp | CCTCTGGACGCCAACAGATACATGACTTGCAGTCAGTaGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLDANRYMTCSQ*GFGPQAKALQS Trigger: GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTATCTGTTGGCGTCCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CAA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGACCACCTGGTCTTGCTaGGCCACCCACAACCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQTTWSC*ATHNLK Trigger: TTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGT...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR TCA 72 bp | CAGCTCCTACTTCCTCACAATAGGGCAGGCAGGGTTTaGGAAATGAAGGACTCTTGGATGCCAGTTTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLLLPHNRAGRV*EMKDSWMPVFK Trigger: CTTGAAAACTGGCATCCAAGAGTCCTTCATTTCTCAAACCCTGCCTGCCCTATTGTGAGGAAGTAGGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CAA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGAGGCTTTTCATGTTCTaGTACCTCCTCCTCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQRLFMF*YLLLHR Trigger: TCTGTGGAGGAGGAGGTACAAGAACATGAAAAGCCT...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAGAAGAAATCCCACTCTaGCCCCATACTATTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTEEIPL*PHTIYS Trigger: TGAATAAATAGTATGGGGCAAGAGTGGGATTTCTTC...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR CCA 72 bp | GCCACTGTAAGTTCTGTTGTATCTATCAGTACCACCTaGTCTTGCTTGGCCACCCACAACCTAAAAGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ATVSSVVSISTT*SCLATHNLKVL Trigger: CAGAACTTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGTACTGATAGATACAACAGAACTTACAGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGGAAGAAATCCCACTCTaGCCCCATACTATTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GEGKAHSGMISQPTHGSQEEIPL*PHTIYS Trigger: TGAATAAATAGTATGGGGCAAGAGTGGGATTTCTTC...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAACCACCTGGTCTTGCTaGGCCACCCACAACCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RFPKGLERRLIPTFTVTETTWSC*ATHNLK Trigger: TTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGT...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR GCA 72 bp | GTAAGTTCTGTTGTATCTATCAGTACCACCTGGTCTTaGTTGGCCACCCACAACCTAAAAGTTCTGGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VSSVVSISTTWS*LATHNLKVLEN Trigger: GTTTTCCAGAACTTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGTACTGATAGATACAACAGAACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR CCA 72 bp | AATTATAAATGGGAGCTGTATACGAGTCCTTGGAACTaGAGAGAGGACCCTAGAGACACTTCTCTTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NYKWELYTSPWN*REDPRDTSLFL Trigger: GAGAAAAAGAGAAGTGTCTCTAGGGTCCTCTCTCCAGTTCCAAGGACTCGTATACAGCTCCCATTTATAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CAA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGCAACAGATACATGACTaGCAGTCAGTGGGGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KTLSCNTETFPIILTQQQQQIHD*QSVGLW Trigger: CCAAAGCCCCACTGACTGCAAGTCATGTATCTGTTG...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAGAAGAAATCCCACTCTaGCCCCATACTATTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: RFPKGLERRLIPTFTVTEEEIPL*PHTIYS Trigger: TGAATAAATAGTATGGGGCAAGAGTGGGATTTCTTC...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR TCA 72 bp | ACGACTAATTCCTACTTTTACAGTCACAGAACTTTGTaGCCATCAAATACCTTGAAATCCCCAGCTCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: TTNSYFYSHRTL*PSNTLKSPAPT Trigger: AGTAGGAGCTGGGGATTTCAAGGTATTTGATGGTCACAAAGTTCTGTGACTGTAAAAGTAGGAATTAGTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| 3UTR TCA 72 bp | AATGAAAGATTCAAAATGTACAGGGGCAAAGGAACTTaGGAAGATGGAGTAAGGCATTCTACCTATCGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NERFKMYRGKGT*EDGVRHSTYRS Trigger: ACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTACATTTTGAATCTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGCTGACGGGGACTGAGTaGCCGCTGACGACTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGFGPQAKALQSTGGSSRLTGTE*PLTTPP Trigger: TGGCGGAGTCGTCAGCGGCCACTCAGTCCCCGTCAG...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGGGCTGCTCCAGAGCCTaGGACCCATTTCTCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGFGPQAKALQSTGGSSRGCSRA*DPFLRH Trigger: ATGCCTGAGAAATGGGTCTCAGGCTCTGGAGCAGCC...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCGAGACTGACGGGGACTaGGTGGCCGCTGACGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGEGKAHSGMISQPTHGSETDGD*VAADDS Trigger: GGAGTCGTCAGCGGCCACTCAGTCCCCGTCAGTCTC...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAGTAGGAGTTTCTGGCTaGGCCTGCGGCTGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTVGVSG*ACGCSE Trigger: CTCTGAGCAGCCGCAGGCCCAGCCAGAAACTCCTAC...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| 3UTR CAA 72 bp | CAAACTGTGGAGGCTTCCAGTGCAGAACGAGGTCCCTaGTTAGGAGACCCCATAGACCATGGGTGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QTVEASSAERGP*LGDPIDHGCVH Trigger: GTGAACGCACCCATGGTCTATGGGGTCTCCTAACAAGGGACCTCGTTCTGCACTGGAAGCCTCCACAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCTGAGTAGGAGTTTCTaGCTGGGCCTGCGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGEGKAHSGMISQPTHGSLSRSF*LGLRLL Trigger: GAGCAGCCGCAGGCCCAGCCAGAAACTCCTACTCAG...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGCTGAGTAGGAGTTTCTaGCTGGGCCTGCGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEGKAHSGMISQPTHGSQLSRSF*LGLRLL Trigger: GAGCAGCCGCAGGCCCAGCCAGAAACTCCTACTCAG...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCTGCCTGGCACACCGTTaGCACCAGCTTCTTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGEGKAHSGMISQPTHGSCLAHR*HQLLLW Trigger: CCACAAAAGAAGCTGGTGGCAACGGTGTGCCAGGCA...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGGTTTCTGGCTGGGCCTaGGGCTGCTCAGAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGKAHSGMISQPTHGSQVSGWA*GCSEFS Trigger: TGAAAACTCTGAGCAGCCGCAGGCCCAGCCAGAAAC...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGATCTGGAACCTTGTTTaGGTTCTTGGGTTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGFGPQAKALQSTGGSSRIWNLV*VLGFLV Trigger: GACCAAGAACCCAAGAACCCAAACAAGGTTCCAGAT...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGCCAGAGAGAGCAGCATaGTCAGTGTGGTGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGKAHSGMISQPTHGSQPERAA*SVWCQR Trigger: TCTTTGGCACCACACTGATCATGCTGCTCTCTCTGG...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGGATCAGATCCAGTTTTaGCATCTGTGTGTTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WGFGPQAKALQSTGGSSRDQIQF*HLCVLG Trigger: TCCTAGAACACACAGATGTCAAAACTGGATCTGATC...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAGTTGTGGAAAGCTTCTaGAGACAGGGTAATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTVVESF*RQGNVH Trigger: GTGGACATTACCCTGTCTTCAGAAGCTTTCCACAAC...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCGTTGTGGAAAGCTTCTaGAGACAGGGTAATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSVVESF*RQGNVH Trigger: GTGGACATTACCCTGTCTTCAGAAGCTTTCCACAAC...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTGCTGCTGTAGTGTGTaGGAACTGTCTACCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQCCCSV*ELSTEQ Trigger: CTGCTCGGTAGACAGTTCTCACACACTACAGCAGCA...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCAACTATCAACCTCTGTaGCTTCCCCCATCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSNYQPL*LPPSQS Trigger: ACTCTGTGATGGGGGAAGTCACAGAGGTTGATAGTT...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAGACAGAAAAGCAGGTTaGTCTGGGAAACTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTDRKAG*SGKLSG Trigger: TCCAGACAGTTTCCCAGAGCAACCTGCTTTTCTGTC...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGCTGTACTTTCTGTGGTaGAAGATGTTTTATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WGFGPQAKALQSTGGSSRLYFLW*KMFYWP Trigger: AGGCCAATAAAACATCTTGCACCACAGAAAGTACAG...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACATCTGTCCTCCCCATCTaGAACCTTGTTTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTSVLPI*NLVWVL Trigger: AAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGA...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGAGACTGACGGGGACTaGGTGGCCGCTGACGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQETDGD*VAADDS Trigger: GGAGTCGTCAGCGGCCACTCAGTCCCCGTCAGTCTC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGAGACTGACGGGGACTaGGTGGCCGCTGACGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFETDGD*VAADDS Trigger: GGAGTCGTCAGCGGCCACTCAGTCCCCGTCAGTCTC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCACCAGAGAGAGCAGCATaGTCAGTGTGGTGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPPERAA*SVWCQR Trigger: TCTTTGGCACCACACTGATCATGCTGCTCTCTCTGG...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAGGTGGCTGCAAGGAATaGCAGTTGCAAGAGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPGGCKE*QLQEKP Trigger: CGGTTTCTCTTGCAACTGGCATTCCTTGCAGCCACC...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCGACAGAAAAGCAGGTTaGTCTGGGAAACTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGEGKAHSGMISQPTHGSDRKAG*SGKLSG Trigger: TCCAGACAGTTTCCCAGAGCAACCTGCTTTTCTGTC...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACATGTTCTGCCTTAGACTaGCCAAAATCCAGTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTCSALD*PKSSAL Trigger: AAGTGCACTGGATTTTGGGCAGTCTAAGGCAGAACA...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCTGTTCTGCCTTAGACTaGCCAAAATCCAGTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSCSALD*PKSSAL Trigger: AAGTGCACTGGATTTTGGGCAGTCTAAGGCAGAACA...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCGATATTCCTTCATCCTaGACCTTCTCAGCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSDIPSS*TFSACL Trigger: AAGGCAAGCTGAGAAGGTGCAGGATGAAGGAATATC...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTCTGACGGGGACTGAGTaGCCGCTGACGACTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFLTGTE*PLTTPP Trigger: TGGCGGAGTCGTCAGCGGCCACTCAGTCCCCGTCAG...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCACTACTCTGTCCTTGTTaGTCCCCTGAGGTGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPLLCPC*SPEVSP Trigger: TGGACTCACCTCAGGGGACCAACAAGGACAGAGTAG...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGCTCTGGGAAACTGTCTaGAATAGAAGGGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQLWETV*NRRVAA Trigger: TGCAGCCACCCTTCTATTCCAGACAGTTTCCCAGAG...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACATTCTACACTGGCTACTaGAAGTTCAGATGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTFYTGY*KFRWGQ Trigger: TTGTCCCCATCTGAACTTCCAGTAGCCAGTGTAGAA...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGGTAGGAGTTTCTGGCTaGGCCTGCGGCTGCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSVSYSELRVLSLRKKRVGVSG*ACGCSE Trigger: CTCTGAGCAGCCGCAGGCCCAGCCAGAAACTCCTAC...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGGGCTGCTCCAGAGCCTaGGACCCATTTCTCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSVSYSELRVLSLRKKRGCSRA*DPFLRH Trigger: ATGCCTGAGAAATGGGTCTCAGGCTCTGGAGCAGCC...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCGAGCAAAGGTTTGCTTaGGTTTTCCTCCAGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSEQRFA*VFLQKI Trigger: TATCTTCTGGAGGAAAACTCAAGCAAACCTTTGCTC...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAAGGGCCTTGTTGACATaGACCATCGCAGCATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPRALLT*TIAAFM Trigger: CATGAATGCTGCGATGGTGCATGTCAACAAGGCCCT...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCTGTGGAGCAAAGGTTTaGTTGAGTTTTCCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSCGAKV*LSFPPE Trigger: TTCTGGAGGAAAACTCAAGCAAACCTTTGCTCCACA...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCACTCTGGGAAACTGTCTaGAATAGAAGGGTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPLWETV*NRRVAA Trigger: TGCAGCCACCCTTCTATTCCAGACAGTTTCCCAGAG...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAAAAAGCAGGTTGCTCTaGGAAACTGTCTGGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTKSRLL*ETVWNR Trigger: TCTATTCCAGACAGTTTCCCAGAGCAACCTGCTTTT...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCAAAAGCAGGTTGCTCTaGGAAACTGTCTGGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSKSRLL*ETVWNR Trigger: TCTATTCCAGACAGTTTCCCAGAGCAACCTGCTTTT...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAAATCAGATCGTGCACTaGGAAATCACTGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTNQIVH*EITEKS Trigger: AGACTTCTCAGTGATTTCCCAGTGCACGATCTGATT...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAGTTGTGGAAAGCTTCTaGAGACAGGGTAATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPVVESF*RQGNVH Trigger: GTGGACATTACCCTGTCTTCAGAAGCTTTCCACAAC...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAAGTCAGGTTTTTCTGTaGTGTCCTCTATTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTSQVFL*CPLLLC Trigger: ACACAGTAATAGAGGACATCACAGAAAAACCTGACT...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCTTTTCCTTCTGTAAATaGTTCTGTCCAGTCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSFSFCK*FCPVTC Trigger: ACAGGTGACTGGACAGAAGCATTTACAGAAGGAAAA...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGCTTAGCTCACTTTCATaGAAGAGTTCCACAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEGKAHSGMISQPTHGSQLSSLS*KSSTGK Trigger: TTTGCCTGTGGAACTCTTGCATGAAAGTGAGCTAAG...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAACAGAAAATCAGATCGTaGACCGCACACGAGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RFPKGLERRLIPTFTVTEQKIRS*TAHEEP Trigger: CGGCTCCTCGTGTGCGGTGCACGATCTGATTTTCTG...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088169.7 |
||
| CDS-3UTR CCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCATCTGTCCTCCCCATCTaGAACCTTGTTTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPSVLPI*NLVWVL Trigger: AAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGA...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCTACTGGAAGTTCAGATaGGGACAAGGAATATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: YMTCSQWGFGPQAKALQSYWKFR*GQGICT Trigger: TGTACATATTCCTTGTCCCCATCTGAACTTCCAGTA...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACATACTGGAAGTTCAGATaGGGACAAGGAATATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTYWKFR*GQGICT Trigger: TGTACATATTCCTTGTCCCCATCTGAACTTCCAGTA...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTTCTACACTGGCTACTaGAAGTTCAGATGGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQFYTGY*KFRWGQ Trigger: TTGTCCCCATCTGAACTTCCAGTAGCCAGTGTAGAA...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACAGTCCTGTACTTTCTGTaGTGCAAGATGTTTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTVLYFL*CKMFYW Trigger: CCAATAAAACATCTTGCACCACAGAAAGTACAGGAC...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTTTTGCAGCAGCACTTaGAAGGGAGTCAGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQFCSST*KGVRFF Trigger: GAAAAACCTGACTCCCTTCCAAGTGCTGCTGCAAAA...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCTGTACTTTCTGTGGTaGAAGATGTTTTATTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGEGKAHSGMISQPTHGSLYFLW*KMFYWP Trigger: AGGCCAATAAAACATCTTGCACCACAGAAAGTACAG...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGCAGAAAATCAGATCGTaGACTGGGAAATCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQQKIRS*TGKSLR Trigger: TCTCAGTGATTTCCCAGTGCACGATCTGATTTTCTG...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| 3UTR CAA 72 bp | AGTTCTGTTGTATCTATCAGTACCACCTGGTCTTGCTaGGCCACCCACAACCTAAAAGTTCTGGAAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVSISTTWSC*ATHNLKVLENT Trigger: CGTGTTTTCCAGAACTTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGTACTGATAGATACAACAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCGATTCCAGGAAGCTTTaGTTGGATCTTTTCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGEGKAHSGMISQPTHGSDSRKL*LDLFNN Trigger: ATTGTTGAAAAGATCCAAGCAAAGCTTCCTGGAATC...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAGGATGGGTAACGCCCTaGCTCTTTATTTCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFPKGLERRLIPTFTVTEGWVTP*LFISQW Trigger: CCACTGAGAAATAAAGAGGCAGGGCGTTACCCATCC...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGTGCCTGGCACACCGTTaGCACCAGCTTCTTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQCLAHR*HQLLLW Trigger: CCACAAAAGAAGCTGGTGGCAACGGTGTGCCAGGCA...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCATGTGGAGCAAAGGTTTaGTTGAGTTTTCCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPCGAKV*LSFPPE Trigger: TTCTGGAGGAAAACTCAAGCAAACCTTTGCTCCACA...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTTGCTGCTGTAGTGTGTaGGAACTGTCTACCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFCCCSV*ELSTEQ Trigger: CTGCTCGGTAGACAGTTCTCACACACTACAGCAGCA...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAAACTATCAACCTCTGTaGCTTCCCCCATCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RFPKGLERRLIPTFTVTENYQPL*LPPSQS Trigger: ACTCTGTGATGGGGGAAGTCACAGAGGTTGATAGTT...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGGTGGCTGCAAGGAATaGCAGTTGCAAGAGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFGGCKE*QLQEKP Trigger: CGGTTTCTCTTGCAACTGGCATTCCTTGCAGCCACC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCATTTTCCTTCTGTAAATaGTTCTGTCCAGTCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPFSFCK*FCPVTC Trigger: ACAGGTGACTGGACAGAAGCATTTACAGAAGGAAAA...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTTAGCTAGAACAAACTaGCTACCTAATGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQLARTN*LPNVSL Trigger: GAGTGAAACATTAGGTAGCCAGTTTGTTCTAGCTAA...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| 3UTR CAA 72 bp | TGTAAGTTCTGTTGTATCTATCAGTACCACCTGGTCTaGCTTGGCCACCCACAACCTAAAAGTTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CKFCCIYQYHLV*LGHPQPKSSGK Trigger: TTTTCCAGAACTTTTAGGTTGTGGGTGGCCAAGCAAGACCAGGTGGTACTGATAGATACAACAGAACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAGCACTGGGAAATCACTaGGAAGTCTTGCTAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RFPKGLERRLIPTFTVTEALGNH*EVLLEH Trigger: ATGTTCTAGCAAGACTTCTCAGTGATTTCCCAGTGC...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGAGGGCCTTGTTGACATaGACCATCGCAGCATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQRALLT*TIAAFM Trigger: CATGAATGCTGCGATGGTGCATGTCAACAAGGCCCT...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGTTGTGGAAAGCTTCTaGAGACAGGGTAATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQVVESF*RQGNVH Trigger: GTGGACATTACCCTGTCTTCAGAAGCTTTCCACAAC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGGAGCAAAGGTTTGCTTaGGTTTTCCTCCAGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GSSVSYSELRVLSLRKKREQRFA*VFLQKI Trigger: TATCTTCTGGAGGAAAACTCAAGCAAACCTTTGCTC...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGCACTGGGAAATCACTaGGAAGTCTTGCTAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQALGNH*EVLLEH Trigger: ATGTTCTAGCAAGACTTCTCAGTGATTTCCCAGTGC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGATATTCCTTCATCCTaGACCTTCTCAGCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQDIPSS*TFSACL Trigger: AAGGCAAGCTGAGAAGGTGCAGGATGAAGGAATATC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTATCTGGAACCTTGTTTaGGTTCTTGGGTTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFIWNLV*VLGFLV Trigger: GACCAAGAACCCAAGAACCCAAACAAGGTTCCAGAT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTTTTTGCAGCAGCACTTaGAAGGGAGTCAGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFFCSST*KGVRFF Trigger: GAAAAACCTGACTCCCTTCCAAGTGCTGCTGCAAAA...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 40% GC, longest homopolymer 9 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAAATTACTTCAAACGGTaGCTCAGGAGAATCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFPKGLERRLIPTFTVTENYFKR*LRRIFF Trigger: GAAAAAGATTCTCCTGAGTCACCGTTTGAAGTAATT...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGATCAGATCCAGTTTTaGCATCTGTGTGTTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFDQIQF*HLCVLG Trigger: TCCTAGAACACACAGATGTCAAAACTGGATCTGATC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTCTTAGCTCACTTTCATaGAAGAGTTCCACAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFLSSLS*KSSTGK Trigger: TTTGCCTGTGGAACTCTTGCATGAAAGTGAGCTAAG...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTCAGAAAATCAGATCGTaGACTGGGAAATCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFQKIRS*TGKSLR Trigger: TCTCAGTGATTTCCCAGTGCACGATCTGATTTTCTG...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAAAATCTTTTTCTACACTaGCTACTGGAAGTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RFPKGLERRLIPTFTVTENLFLH*LLEVQM Trigger: CATCTGAACTTCCAGTAGCCAGTGTAGAAAAAGATT...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGAATCTTTTTCTACACTaGCTACTGGAAGTTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSSVSYSELRVLSLRKKRNLFLH*LLEVQM Trigger: CATCTGAACTTCCAGTAGCCAGTGTAGAAAAAGATT...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTAATCAGATCGTGCACTaGGAAATCACTGAGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFNQIVH*EITEKS Trigger: AGACTTCTCAGTGATTTCCCAGTGCACGATCTGATT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTAGTCAGGTTTTTCTGTaGTGTCCTCTATTACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFSQVFL*CPLLLC Trigger: ACACAGTAATAGAGGACATCACAGAAAAACCTGACT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGTCCTGTACTTTCTGTaGTGCAAGATGTTTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFVLYFL*CKMFYW Trigger: CCAATAAAACATCTTGCACCACAGAAAGTACAGGAC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR TCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTAATTACTTCAAACGGTaGCTCAGGAGAATCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFNYFKR*LRRIFF Trigger: GAAAAAGATTCTCCTGAGTCACCGTTTGAAGTAATT...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGGATTCCAGGAAGCTTTaGTTGGATCTTTTCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQDSRKL*LDLFNN Trigger: ATTGTTGAAAAGATCCAAGCAAAGCTTCCTGGAATC...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR GCA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGATTCCAGGAAGCTTTaGTTGGATCTTTTCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HQFAVLQGPKELLGTTVFDSRKL*LDLFNN Trigger: ATTGTTGAAAAGATCCAAGCAAAGCTTCCTGGAATC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CCA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGTTAGCTAGAACAAACTaGCTACCTAATGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLSCNTETFPIILTQQQLARTN*LPNVSL Trigger: GAGTGAAACATTAGGTAGCCAGTTTGTTCTAGCTAA...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS CCA 90 bp | CTCAGGCATAGAGCCAGGCAGCTCAGAATGAAGCTGAGAACTGCCTaGCACACCGTTGCCACCAGCTTCTTTTGTGGAACTGAGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRHRARQLRMKLRTA*HTVATSFFCGTEVV Trigger: GACTACCTCAGTTCCACAAAAGAAGCTGGTGGCAACGGTGTGCCAGGCAGTTCTCAGCTTCATTCTGAGCTGCCTGGCTCTATGCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
||
| CDS GCA 90 bp | TGGGAAACTGTCTGGAATAGAAGGGTGGCTGCAAGGAATGCCAGTTaGAAGAGAAACCGGAGCGTCTACTCTGTCCTTGTTGGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WETVWNRRVAARNAS*KRNRSVYSVLVGPL Trigger: CAGGGGACCAACAAGGACAGAGTAGACGCTCCGGTTTCTCTTGCAACTGGCATTCCTTGCAGCCACCCTTCTATTCCAGACAGTTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCAGTTTGAGGGCCTTGTaGACATGCACCATCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YMTCSQWGFGPQAKALQSSLRAL*TCTIAA Trigger: TGCTGCGATGGTGCATGTCAACAAGGCCCTCAAACT...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGAGGAAGTCATACTTTTaGAAGGTGGCTCATCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGFGPQAKALQSTGGSSRRKSYF*KVAHQS Trigger: GCTCTGATGAGCCACCTTCAAAAAGTATGACTTCCT...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGCGACTGGGAGTCTCTTaGATTTCCCTTTCACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WGFGPQAKALQSTGGSSRRLGVS*ISLSLV Trigger: AACAAGTGAAAGGGAAATCAAAGAGACTCCCAGTCG...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS TCA 90 bp | ATCATTCACACATCTAGACACCTCTTCCAGTGCTGCTGTAGTGTGTaGGAACTGTCTACCGAGCAGTACAGAGGATGGGTAACGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IIHTSRHLFQCCCSV*ELSTEQYRGWVTPC Trigger: GCAGGGCGTTACCCATCCTCTGTACTGCTCGGTAGACAGTTCTCACACACTACAGCAGCACTGGAAGAGGTGTCTAGATGTGTGAATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS GCA 90 bp | TCAGCTTGCCTTTCTCCTAATTCTTTAATGGCTCTGATGGTGAGCTaGTCCTGCTCTAAGTCGGGAGACATCGTAGGGGCACCTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SACLSPNSLMALMVS*SCSKSGDIVGAPPV Trigger: AACTGGAGGTGCCCCTACGATGTCTCCCGACTTAGAGCAGGAGCAGCTCACCATCAGAGCCATTAAAGAATTAGGAGAAAGGCAAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS CCA 90 bp | GACAGAAAAGCAGGTTGCTCTGGGAAACTGTCTGGAATAGAAGGGTaGCTGCAAGGAATGCCAGTTGCAAGAGAAACCGGAGCGTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: DRKAGCSGKLSGIEG*LQGMPVARETGAST Trigger: AGTAGACGCTCCGGTTTCTCTTGCAACTGGCATTCCTTGCAGCCACCCTTCTATTCCAGACAGTTTCCCAGAGCAACCTGCTTTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCAGTTTGAGGGCCTTGTaGACATGCACCATCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGEGKAHSGMISQPTHGSSLRAL*TCTIAA Trigger: TGCTGCGATGGTGCATGTCAACAAGGCCCTCAAACT...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGTCACCTGTGGATTaGGTAATGGGAGTGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGEGKAHSGMISQPTHGSQSPVD*VMGVLP Trigger: TGGGAGCACTCCCATTACCAAATCCACAGGTGACTG...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACACCCTTTCACTTGTTTTaGCAGCAGCACTTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTPFHLF*QQHLEG Trigger: CCCTTCCAAGTGCTGCTGCAAAAACAAGTGAAAGGG...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS TCA 90 bp | AGAGAGCTCAATCCCGCTTGTGAGGTCGAAAATATAGATACAGGCTaGGAGGAAGAGGAAGAAACAAAGGAATCCGCACACGAGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RELNPACEVENIDTG*EEEEETKESAHEEP Trigger: CGGCTCCTCGTGTGCGGATTCCTTTGTTTCTTCCTCTTCCTCTCAGCCTGTATCTATATTTTCGACCTCACAAGCGGGATTGAGCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065304.13 |
||
| CDS TCA 90 bp | GCTTCTGTCCAGTCACCTTGTGAGGTCGAAAATATAGATACAGGCTaGGAGGAAGAGGAAGAAACAAAGGAATCCGCACACGAGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASVQSPCEVENIDTG*EEEEETKESAHEEP Trigger: CGGCTCCTCGTGTGCGGATTCCTTTGTTTCTTCCTCTTCCTCTCAGCCTGTATCTATATTTTCGACCTCACAAGGTGACTGGACAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235593.2 |
||
| CDS GCA 90 bp | TGCCTTTCTCCTAATTCTTTAATGGCTCTGATGGTGAGCTGCTCCTaGTCTAAGTCGGGAGACATCGTAGGGGCACCTCCAGTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLSPNSLMALMVSCS*SKSGDIVGAPPVVS Trigger: AGAAACAACTGGAGGTGCCCCTACGATGTCTCCCGACTTAGAGCAGGAGCAGCTCACCATCAGAGCCATTAAAGAATTAGGAGAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
||
| CDS CCA 90 bp | CCCAAAATCCAGTGCACTTCTGTCCTCCCCATCTGGAACCTTGTTTaGGTTCTTGGGTTCTTGGTCTTTAACTACCCACTCTTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PKIQCTSVLPIWNLV*VLGFLVFNYPLFCW Trigger: CCAGCAGAAGAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAGTGCACTGGATTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGGAGCAAACTTTGGGGTaGTTAGTCATATCAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WGFGPQAKALQSTGGSSREQTLG*LVISSF Trigger: AAAGCTTGATATGACTAACAACCCCAAAGTTTGCTC...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCCTGTGGAGCAAAGGTTaGCTTGAGTTTTCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YMTCSQWGFGPQAKALQSLWSKG*LEFSSR Trigger: TCTGGAGGAAAACTCAAGCAAACCTTTGCTCCACAG...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CCA 90 bp | TGCCTTAGACTGCCCAAAATCCAGTGCACTTCTGTCCTCCCCATCTaGAACCTTGTTTGGGTTCTTGGGTTCTTGGTCTTTAACTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRLPKIQCTSVLPI*NLVWVLGFLVFNYP Trigger: TGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAGTGCACTGGATTTTGGGCAGTCTAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CCA 90 bp | TATCCCCTTCTCCTCGGCTCCTGTGAGGACAGCCATCAAGTCCTCTaGGGAGGAACCATCTGTATCTTCAACATATTTTCCAAGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YPLLLGSCEDSHQVL*GGTICIFNIFSKQR Trigger: TCTTTGCTTGGAAAATATGTTGAAGATACAGATGGTTCCTCCCCAGAGGACTTGATGGCTGTCCTCACAGGAGCCGAGGAGAAGGGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS-3UTR CAA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCATGCAAGGAATGCCAGTaGCAAGAGAAACCGGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPCKECQ*QEKPER Trigger: ACGCTCCGGTTTCTCTTGCAACTGGCATTCCTTGCA...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCATCTGGAACCTTGTTaGGGTTCTTGGGTTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGEGKAHSGMISQPTHGSHLEPC*GSWVLG Trigger: ACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATG...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | TACATGACTTGCAGTCAGTGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCGGAGCAAAGGTTTGCTaGAGTTTTCCTCCAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YMTCSQWGFGPQAKALQSGAKVC*SFPPED Trigger: ATCTTCTGGAGGAAAACTCAAGCAAACCTTTGCTCC...GCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCACTGACTGCAAGTCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | TGGGGCTTTGGTCCTCAGGCTAAAGCACTGCAAAGCACAGGAGGAAGCAGCAGGCTTGCTAGAACATTCTaGTTAACCATTTCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WGFGPQAKALQSTGGSSRLARTF*LTISVL Trigger: CAAGACTGAAATGGTTAACAAGAATGTTCTAGCAAG...CCTGCTGCTTCCTCCTGTGCTTTGCAGTGCTTTAGCCTGAGGACCAAAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS TCA 90 bp | TGTCAGATGAACTCTGTGGCCCAGACTGTGGAGCAAAGGTTTGCTTaGGTTTTCCTCCAGAAGATATTCCTTCATCCTGCACCTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CQMNSVAQTVEQRFA*VFLQKIFLHPAPSQ Trigger: CTGAGAAGGTGCAGGATGAAGGAATATCTTCTGGAGGAAAACTCAAGCAAACCTTTGCTCCACAGTCTGGGCCACAGAGTTCATCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS GCA 90 bp | GGAATATGTACAAATGTGTTCTGCCTTAGACTGCCCAAAATCCAGTaGACTTCTGTCCTCCCCATCTGGAACCTTGTTTGGGTTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GICTNVFCLRLPKIQ*TSVLPIWNLVWVLG Trigger: CCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAGTGCACTGGATTTTGGGCAGTCTAAGGCAGAACACATTTGTACATATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS GCA 90 bp | AGGATGTCAGATGAACTCTGTGGCCCAGACTGTGGAGCAAAGGTTTaGTTGAGTTTTCCTCCAGAAGATATTCCTTCATCCTGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RMSDELCGPDCGAKV*LSFPPEDIPSSCTF Trigger: GAAGGTGCAGGATGAAGGAATATCTTCTGGAGGAAAACTCAAGCAAACCTTTGCTCCACAGTCTGGGCCACAGAGTTCATCTGACATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS CCA 90 bp | GAGCAGTACAGAGGATGGGTAACGCCCTGCCTCTTTATTTCTCAGTaGAAAGAGTTTGTCATTCATTTCCAACAAGTCTGCGGGGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: EQYRGWVTPCLFISQ*KEFVIHFQQVCGGF Trigger: GAATCCCCCGCAGACTTGTTGGAAATGAATGACAAACTCTTTCCACTGAGAAATAAAGAGGCAGGGCGTTACCCATCCTCTGTACTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCAGAGGAAGTCATACTTTTaGAAGGTGGCTCATCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEGKAHSGMISQPTHGSQRKSYF*KVAHQS Trigger: GCTCTGATGAGCCACCTTCAAAAAGTATGACTTCCT...CTGGGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCGGAGCAAAGGTTTGCTaGAGTTTTCCTCCAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGEGKAHSGMISQPTHGSGAKVC*SFPPED Trigger: ATCTTCTGGAGGAAAACTCAAGCAAACCTTTGCTCC...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS TCA 90 bp | AAAATCAGATCGTGCACTTGTGAGGTCGAAAATATAGATACAGGCTaGGAGGAAGAGGAAGAAACAAAGGAATCCGCACACGAGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KIRSCTCEVENIDTG*EEEEETKESAHEEP Trigger: CGGCTCCTCGTGTGCGGATTCCTTTGTTTCTTCCTCTTCCTCTCAGCCTGTATCTATATTTTCGACCTCACAAGTGCACGATCTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025667.14 |
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| CDS CCA 90 bp | CTTCTGTCCTCCCCATCTGGAACCTTGTTTGGGTTCTTGGGTTCTTaGTCTTTAACTACCCACTCTTCTGCTGGACCAATTTCTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSPSGTLFGFLGS*SLTTHSSAGPISFD Trigger: GTCAAAAGAAATTGGTCCAGCAGAAGAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCCGATTCCAGGAAGCTTaGCTTGGATCTTTTCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: QGEGKAHSGMISQPTHGSRFQEA*LGSFQQ Trigger: TTGTTGAAAAGATCCAAGCAAAGCTTCCTGGAATCG...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAAGCAAAGATTCCAACTaGGCAGAAGCTGGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPSKDSN*AEAGTV Trigger: AACTGTGCCAGCTTCTGCCAAGTTGGAATCTTTGCT...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS TCA 90 bp | ATCAAGCTTTTCAGGTGTGACTTCATTCAGGGTATTAGGTACTTGTaGAGCCACCTCACCTTCCAGACTCTTCTGAGTAGGAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IKLFRCDFIQGIRYL*SHLTFQTLLSRSFW Trigger: CCAGAAACTCCTACTCAGAAGAGTCTGGAAGGTGAGGTGGCTTCACAAGTACCTAATACCCTGAATGAAGTCACACCTGAAAAGCTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGAGTTTGAGGGCCTTGTaGACATGCACCATCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSVSYSELRVLSLRKKRSLRAL*TCTIAA Trigger: TGCTGCGATGGTGCATGTCAACAAGGCCCTCAAACT...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCATTTTTGCAGCAGCACTaGGAAGGGAGTCAGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPFLQQH*EGSQVF Trigger: AAAAACCTGACTCCCTTCCAAGTGCTGCTGCAAAAA...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCACGACTGGGAGTCTCTTaGATTTCCCTTTCACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPRLGVS*ISLSLV Trigger: AACAAGTGAAAGGGAAATCAAAGAGACTCCCAGTCG...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGAGATCAGATCCAGTTTaGACATCTGTGTGTTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQRSDPV*TSVCSR Trigger: CCTAGAACACACAGATGTCAAAACTGGATCTGATCT...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGAAATGGACCTCTTCAGTCAGCCAGGCCTCTGGACGCCAACAGATACACTTGCTAGAACATTCTaGTTAACCATTTCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLEMDLFSQPGLWTPTDTLARTF*LTISVL Trigger: CAAGACTGAAATGGTTAACAAGAATGTTCTAGCAAG...TGTATCTGTTGGCGTCCAGAGGCCTGGCTGACTGAAGAGGTCCATTTCTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS GCA 90 bp | ATTCATTTCCAACAAGTCTGCGGGGGATTCTCTATCGCCATGAGCTaGCCAGCCACCCAAATCATTTGGGTTTTCCTTATACAAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHFQQVCGGFSIAMS*PATQIIWVFLIQIF Trigger: AAAGATTTGTATAAGGAAAACCCAAATGATTTGGGTGGCTGGGCAGCTCATGGCGATAGAGAATCCCCCGCAGACTTGTTGGAAATGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGAGGGGAAAGCACACTCTGGAATGATTTCTCAACCAACACATGGATCCAGCCACCCAAATCATTaGGGTTTTCCTTATACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGEGKAHSGMISQPTHGSSHPNH*GFPYTN Trigger: ATTTGTATAAGGAAAACCCAAATGATTTGGGTGGCT...GGATCCATGTGTTGGTTGAGAAATCATTCCAGAGTGTGCTTTCCCCTCTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGCCCTTTCACTTGTTTTaGCAGCAGCACTTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSVSYSELRVLSLRKKRPFHLF*QQHLEG Trigger: CCCTTCCAAGTGCTGCTGCAAAAACAAGTGAAAGGG...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS TCA 90 bp | TTCTTGGTCTTTAACTACCCACTCTTCTGCTGGACCAATTTCTTTTaGCAGAAAAGCAGGTTGCTCTGGGAAACTGTCTGGAATAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLVFNYPLFCWTNFF*QKSRLLWETVWNRR Trigger: CCTTCTATTCCAGACAGTTTCCCAGAGCAACCTGCTTTTCTGTCAAAAGAAATTGGTCCAGCAGAAGAGTGGGTAGTTAAAGACCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGTGCAAGGAATGCCAGTaGCAAGAGAAACCGGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KTLSCNTETFPIILTQQQCKECQ*QEKPER Trigger: ACGCTCCGGTTTCTCTTGCAACTGGCATTCCTTGCA...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
||
| CDS-3UTR CAA 90 bp | CGTTTCCCAAAAGGACTGGAAAGACGACTAATTCCTACTTTTACAGTCACAGAACATCTGGAACCTTGTTaGGGTTCTTGGGTTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RFPKGLERRLIPTFTVTEHLEPC*GSWVLG Trigger: ACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATG...TTCTGTGACTGTAAAAGTAGGAATTAGTCGTCTTTCCAGTCCTTTTGGGAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGAGCCACCCAAATCATTaGGGTTTTCCTTATACAAAT | + |
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Preference number: 5 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQSHPNH*GFPYTN Trigger: ATTTGTATAAGGAAAACCCAAATGATTTGGGTGGCT...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | TTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTCTGTGAGTCGTTTCCCAGAGCAAACTTTGGGGTaGTTAGTCATATCAAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LRRWSKAFYLSQSVSRFPEQTLG*LVISSF Trigger: AAAGCTTGATATGACTAACAACCCCAAAGTTTGCTC...TGGGAAACGACTCACAGACTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | GTACAGGGGCAAAGGAACTTGAGAAGATGGAGTAAGGCATTCTACCTATCGCAGTTAACCATTTCAGTCTaGGTAAGGCTGGAAATAGAA | + |
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Preference number: 5 (lower is better) Translates to: VQGQRNLRRWSKAFYLSQLTISV*VRLEIE Trigger: TTCTATTTCCAGCCTTACCAAGACTGAAATGGTTAA...CTGCGATAGGTAGAATGCCTTACTCCATCTTCTCAAGTTCCTTTGCCCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS TCA 90 bp | TCTTACAGGTTTTCCTTCTGTAAATGCTTCTGTCCAGTCACCTTGTaGGGTCGAAAATATAGATACAGGCTGAGAGGAAGAGGAAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SYRFSFCKCFCPVTL*GRKYRYRLRGRGRN Trigger: GTTTCTTCCTCTTCCTCTCAGCCTGTATCTATATTTTCGACCTCACAAGGTGACTGGACAGAAGCATTTACAGAAGGAAAACCTGTAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235593.2 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGTTTTTGCAGCAGCACTaGGAAGGGAGTCAGGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: GSSVSYSELRVLSLRKKRFLQQH*EGSQVF Trigger: AAAAACCTGACTCCCTTCCAAGTGCTGCTGCAAAAA...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS GCA 90 bp | GCTTGGGGATCTAAGTCCCAAGTCAGTATTTCATTAGTAAAGTTATaGATATCATTCACACATCTAGACACCTCTTCCAGTGCTGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: AWGSKSQVSISLVKL*ISFTHLDTSSSAAV Trigger: TACAGCAGCACTGGAAGAGGTGTCTAGATGTGTGAATGATATGCATAACTTTACTAATGAAATACTGACTTGGGACTTAGATCCCCAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTTGGGTTCTTGGGTTCTaGGTCTTTAACTACCCACTC | + |
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Preference number: 5 (lower is better) Translates to: HQFAVLQGPKELLGTTVFWVLGF*VFNYPL Trigger: GAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCA...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGTGGGTTCTTGGGTTCTaGGTCTTTAACTACCCACTC | + |
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Preference number: 5 (lower is better) Translates to: KTLSCNTETFPIILTQQQWVLGF*VFNYPL Trigger: GAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCA...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGAGCAAAGATTCCAACTaGGCAGAAGCTGGCACAGTT | + |
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Preference number: 5 (lower is better) Translates to: KTLSCNTETFPIILTQQQSKDSN*AEAGTV Trigger: AACTGTGCCAGCTTCTGCCAAGTTGGAATCTTTGCT...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | AAAACCCTCTCATGTAACACAGAAACCTTTCCAATTATTTTAACACAGCAGCAGCTGTGGAGCAAAGGTTaGCTTGAGTTTTCCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KTLSCNTETFPIILTQQQLWSKG*LEFSSR Trigger: TCTGGAGGAAAACTCAAGCAAACCTTTGCTCCACAG...CTGCTGCTGTGTTAAAATAATTGGAAAGGTTTCTGTGTTACATGAGAGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CCA 90 bp | GTACTTTCTGTGGTGCAAGATGTTTTATTGGCCTGTTGTTTTGCTTaGGGATCTAAGTCCCAAGTCAGTATTTCATTAGTAAAGTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSVVQDVLLACCFA*GSKSQVSISLVKLC Trigger: GCATAACTTTACTAATGAAATACTGACTTGGGACTTAGATCCCCAAGCAAAACAACAGGCCAATAAAACATCTTGCACCACAGAAAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTCGATTCCAGGAAGCTTaGCTTGGATCTTTTCAACAA | + |
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Preference number: 5 (lower is better) Translates to: HQFAVLQGPKELLGTTVFRFQEA*LGSFQQ Trigger: TTGTTGAAAAGATCCAAGCAAAGCTTCCTGGAATCG...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025667.14 ENSMUST00000065304.13 ENSMUST00000088169.7 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | CATCAATTTGCAGTTTTACAGGGACCAAAAGAGCTTCTTGGTACTACTGTTTTTGTGCAAGATGTTTTATaGGCCTGTTGTTTTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HQFAVLQGPKELLGTTVFVQDVL*ACCFAW Trigger: CCAAGCAAAACAACAGGCCAATAAAACATCTTGCAC...AAAAACAGTAGTACCAAGAAGCTCTTTTGGTCCCTGTAAAACTGCAAATTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCTGTAAGTTATTCAGAGCTGAGAGTTCTTTCATTAAGGAAGAAGAGGTTAACCATTTCAGTCTaGGTAAGGCTGGAAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSVSYSELRVLSLRKKRLTISV*VRLEIE Trigger: TTCTATTTCCAGCCTTACCAAGACTGAAATGGTTAA...CCTCTTCTTCCTTAATGAAAGAACTCTCAGCTCTGAATAACTTACAGAACTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CCA 72 bp | AGAGCCAGGCAGCTCAGAATGAAGCTGAGAACTGCCTaGCACACCGTTGCCACCAGCTTCTTTTGTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: RARQLRMKLRTA*HTVATSFFCGT Trigger: AGTTCCACAAAAGAAGCTGGTGGCAACGGTGTGCCAGGCAGTTCTCAGCTTCATTCTGAGCTGCCTGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS GCA 72 bp | CCTAATTCTTTAATGGCTCTGATGGTGAGCTGCTCCTaGTCTAAGTCGGGAGACATCGTAGGGGCACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PNSLMALMVSCS*SKSGDIVGAPP Trigger: TGGAGGTGCCCCTACGATGTCTCCCGACTTAGAGCAGGAGCAGCTCACCATCAGAGCCATTAAAGAATTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS CCA 72 bp | GCAGGTTGCTCTGGGAAACTGTCTGGAATAGAAGGGTaGCTGCAAGGAATGCCAGTTGCAAGAGAAACCGGA | + |
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Preference number: 6 (lower is better) Translates to: AGCSGKLSGIEG*LQGMPVARETG Trigger: TCCGGTTTCTCTTGCAACTGGCATTCCTTGCAGCCACCCTTCTATTCCAGACAGTTTCCCAGAGCAACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CCA 72 bp | CTCCTCGGCTCCTGTGAGGACAGCCATCAAGTCCTCTaGGGAGGAACCATCTGTATCTTCAACATATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLGSCEDSHQVL*GGTICIFNIFS Trigger: GGAAAATATGTTGAAGATACAGATGGTTCCTCCCCAGAGGACTTGATGGCTGTCCTCACAGGAGCCGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS TCA 72 bp | ACATCTAGACACCTCTTCCAGTGCTGCTGTAGTGTGTaGGAACTGTCTACCGAGCAGTACAGAGGATGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TSRHLFQCCCSV*ELSTEQYRGWV Trigger: TACCCATCCTCTGTACTGCTCGGTAGACAGTTCTCACACACTACAGCAGCACTGGAAGAGGTGTCTAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS GCA 72 bp | CAACAAGTCTGCGGGGGATTCTCTATCGCCATGAGCTaGCCAGCCACCCAAATCATTTGGGTTTTCCTTATA | + |
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Preference number: 6 (lower is better) Translates to: QQVCGGFSIAMS*PATQIIWVFLI Trigger: TATAAGGAAAACCCAAATGATTTGGGTGGCTGGGCAGCTCATGGCGATAGAGAATCCCCCGCAGACTTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS GCA 72 bp | CTTTCTCCTAATTCTTTAATGGCTCTGATGGTGAGCTaGTCCTGCTCTAAGTCGGGAGACATCGTAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSPNSLMALMVS*SCSKSGDIVGA Trigger: TGCCCCTACGATGTCTCCCGACTTAGAGCAGGAGCAGCTCACCATCAGAGCCATTAAAGAATTAGGAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS CCA 72 bp | CTGCCCAAAATCCAGTGCACTTCTGTCCTCCCCATCTaGAACCTTGTTTGGGTTCTTGGGTTCTTGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LPKIQCTSVLPI*NLVWVLGFLVF Trigger: AAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAGTGCACTGGATTTTGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CAA 90 bp | TCCAGTGCACTTCTGTCCTCCCCATCTGGAACCTTGTTTGGGTTCTaGGGTTCTTGGTCTTTAACTACCCACTCTTCTGCTGGACCAATT | + |
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Preference number: 6 (lower is better) Translates to: SSALLSSPSGTLFGF*GSWSLTTHSSAGPI Trigger: AATTGGTCCAGCAGAAGAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAGTGCACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CAA 90 bp | GACTGCCCAAAATCCAGTGCACTTCTGTCCTCCCCATCTGGAACCTaGTTTGGGTTCTTGGGTTCTTGGTCTTTAACTACCCACTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DCPKSSALLSSPSGT*FGFLGSWSLTTHSS Trigger: AGAAGAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAGTGCACTGGATTTTGGGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CAA 72 bp | CTCCCCATCTGGAACCTTGTTTGGGTTCTTGGGTTCTaGGTCTTTAACTACCCACTCTTCTGCTGGACCAAT | + |
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Preference number: 6 (lower is better) Translates to: LPIWNLVWVLGF*VFNYPLFCWTN Trigger: ATTGGTCCAGCAGAAGAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CAA 72 bp | CTTCTGTCCTCCCCATCTGGAACCTTGTTTGGGTTCTaGGGTTCTTGGTCTTTAACTACCCACTCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLSSPSGTLFGF*GSWSLTTHSSA Trigger: AGCAGAAGAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGAGGACAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CAA 90 bp | ATGTCAGATGAACTCTGTGGCCCAGACTGTGGAGCAAAGGTTTGCTaGAGTTTTCCTCCAGAAGATATTCCTTCATCCTGCACCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: MSDELCGPDCGAKVC*SFPPEDIPSSCTFS Trigger: TGAGAAGGTGCAGGATGAAGGAATATCTTCTGGAGGAAAACTCAAGCAAACCTTTGCTCCACAGTCTGGGCCACAGAGTTCATCTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS TCA 72 bp | TTCAGGTGTGACTTCATTCAGGGTATTAGGTACTTGTaGAGCCACCTCACCTTCCAGACTCTTCTGAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRCDFIQGIRYL*SHLTFQTLLSR Trigger: CCTACTCAGAAGAGTCTGGAAGGTGAGGTGGCTTCACAAGTACCTAATACCCTGAATGAAGTCACACCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS GCA 72 bp | CTGTCTACCGAGCAGTACAGAGGATGGGTAACGCCCTaGCTCTTTATTTCTCAGTGGAAAGAGTTTGTCATT | + |
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Preference number: 6 (lower is better) Translates to: LSTEQYRGWVTP*LFISQWKEFVI Trigger: AATGACAAACTCTTTCCACTGAGAAATAAAGAGGCAGGGCGTTACCCATCCTCTGTACTGCTCGGTAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CCA 72 bp | TCCCCATCTGGAACCTTGTTTGGGTTCTTGGGTTCTTaGTCTTTAACTACCCACTCTTCTGCTGGACCAATT | + |
|
Preference number: 6 (lower is better) Translates to: SPSGTLFGFLGS*SLTTHSSAGPI Trigger: AATTGGTCCAGCAGAAGAGTGGGTAGTTAAAGACCAAGAACCCAAGAACCCAAACAAGGTTCCAGATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS GCA 72 bp | GACAAGGAATATGTACAAATGTGTTCTGCCTTAGACTaGCCAAAATCCAGTGCACTTCTGTCCTCCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: DKEYVQMCSALD*PKSSALLSSPS Trigger: AGATGGGGAGGACAGAAGTGCACTGGATTTTGGGCAGTCTAAGGCAGAACACATTTGTACATATTCCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS TCA 72 bp | TTTAACTACCCACTCTTCTGCTGGACCAATTTCTTTTaGCAGAAAAGCAGGTTGCTCTGGGAAACTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FNYPLFCWTNFF*QKSRLLWETVW Trigger: CCAGACAGTTTCCCAGAGCAACCTGCTTTTCTGTCAAAAGAAATTGGTCCAGCAGAAGAGTGGGTAGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CCA 72 bp | CTTCAAACGGTGACTCAGGAGAATCTTTTTCTACACTaGCTACTGGAAGTTCAGATGGGGACAAGGAATATG | + |
|
Preference number: 6 (lower is better) Translates to: LQTVTQENLFLH*LLEVQMGTRNM Trigger: CATATTCCTTGTCCCCATCTGAACTTCCAGTAGCCAGTGTAGAAAAAGATTCTCCTGAGTCACCGTTTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CAA 72 bp | AGAACACTTGGAGGTGCTGCTGAGCAAACTTTGGGGTaGTTAGTCATATCAAGCTTTTCAGGTGTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RTLGGAAEQTLG*LVISSFSGVTS Trigger: TGAAGTCACACCTGAAAAGCTTGATATGACTAACAACCCCAAAGTTTGCTCAGCAGCACCTCCAAGTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS TCA 72 bp | GAATCCTGTCTCATTAAGAACACTTGGAGGTGCTGCTaGGCAAACTTTGGGGTTGTTAGTCATATCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESCLIKNTWRCC*ANFGVVSHIKL Trigger: AAGCTTGATATGACTAACAACCCCAAAGTTTGCTCAGCAGCACCTCCAAGTGTTCTTAATGAGACAGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS CCA 72 bp | AGCGAAGTTCACTCCTGTCTAGTCCTGTACTTTCTGTaGTGCAAGATGTTTTATTGGCCTGTTGTTTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SEVHSCLVLYFL*CKMFYWPVVLL Trigger: AAGCAAAACAACAGGCCAATAAAACATCTTGCACCACAGAAAGTACAGGACTAGACAGGAGTGAACTTCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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| CDS CAA 90 bp | AATCCTGTCTCATTAAGAACACTTGGAGGTGCTGCTGAGCAAACTTaGGGGTTGTTAGTCATATCAAGCTTTTCAGGTGTGACTTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: NPVSLRTLGGAAEQT*GLLVISSFSGVTSF Trigger: GAATGAAGTCACACCTGAAAAGCTTGATATGACTAACAACCCCAAAGTTTGCTCAGCAGCACCTCCAAGTGTTCTTAATGAGACAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 ENSMUST00000235593.2 |
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| CDS TCA 72 bp | TTTTCCTTCTGTAAATGCTTCTGTCCAGTCACCTTGTaGGGTCGAAAATATAGATACAGGCTGAGAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSFCKCFCPVTL*GRKYRYRLRGR Trigger: TCTTCCTCTCAGCCTGTATCTATATTTTCGACCTCACAAGGTGACTGGACAGAAGCATTTACAGAAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235593.2 |
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| CDS CAA 72 bp | TTTCTGTGGTGCAAGATGTTTTATTGGCCTGTTGTTTaGCTTGGGGATCTAAGTCCCAAGTCAGTATTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLWCKMFYWPVV*LGDLSPKSVFH Trigger: ATGAAATACTGACTTGGGACTTAGATCCCCAAGCAAAACAACAGGCCAATAAAACATCTTGCACCACAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065304.13 ENSMUST00000088171.12 |
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