Pregenerated sensors for RTN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030401Ensembl transcript IDs: ENSMUST00000032559.17, ENSMUST00000108468.5
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTCCCACTGGGAAATGGCTCGGCCGAGTGGGAGAGGGTGTGGATaGACGGGAAATGGAAGGGAAGAGGGCTGCTGGGGTATAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TSHWEMARPSGRGCG*TGNGREEGCWGIGR Trigger: CCTGCCTATACCCCAGCAGCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCGAGCCATTTCCCAGTGGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR CCA 90 bp | GAGCCTCTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTaGGAAATGGCTCGGCCGAGTGGGAGAGGGTGTGGATGCACGGGA | + |
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Preference number: 1 (lower is better) Translates to: EPLRKCSPGRSGTSH*EMARPSGRGCGCTG Trigger: TCCCGTGCATCCACACCCTCTCCCACTCGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR CCA 90 bp | GTTGGTGGCTTCAGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTaGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAA | + |
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Preference number: 1 (lower is better) Translates to: VGGFRGTNPSRRLQR*VTEVQGSVLTIQLQ Trigger: TTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCTGAAGCCACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR CCA 90 bp | TTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATaGCTCGGCCGAGTGGGAGAGGGTGTGGATGCACGGGAAATGGAA | + |
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Preference number: 1 (lower is better) Translates to: LGNVVRVAQALPTGK*LGRVGEGVDAREME Trigger: TTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTTCCGCGGCCTTTTCCTaGACTCTTAGAGCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PSRRLQRWVTEVQGSVLTSAAFS*TLRAEP Trigger: AGGCTCTGCTCTAAGAGTCCAGGAAAAGGCCGCGGA...AGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGTGGATGCACGGGAAATaGAAGGGAAGAGGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RKCSPGRSGTSHWEMARPWMHGK*KGRGLL Trigger: CAGCAGCCCTCTTCCCTTCCATTTCCCGTGCATCCA...CGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTTCCGCGGCCTTTTCCTaGACTCTTAGAGCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PAVGHGSAGQRPDYSTTSSAAFS*TLRAEP Trigger: AGGCTCTGCTCTAAGAGTCCAGGAAAAGGCCGCGGA...ACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR CCA 72 bp | TCGGCCGAGTGGGAGAGGGTGTGGATGCACGGGAAATaGAAGGGAAGAGGGCTGCTGGGGTATAGGCAGGCG | + |
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Preference number: 3 (lower is better) Translates to: SAEWERVWMHGK*KGRGLLGYRQA Trigger: CGCCTGCCTATACCCCAGCAGCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR CCA 72 bp | TTCAGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTaGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATT | + |
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Preference number: 3 (lower is better) Translates to: FRGTNPSRRLQR*VTEVQGSVLTI Trigger: AATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR CCA 72 bp | CCACTGGGAAATGGCTCGGCCGAGTGGGAGAGGGTGTaGATGCACGGGAAATGGAAGGGAAGAGGGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: PLGNGSAEWERV*MHGKWKGRGLL Trigger: CAGCAGCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCGAGCCATTTCCCAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR GCA 72 bp | GGGTGTGGATGCACGGGAAATGGAAGGGAAGAGGGCTaGTGGGGTATAGGCAGGCGTCCATCGGGCAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: GCGCTGNGREEG*WGIGRRPSGKD Trigger: GTCTTTGCCCGATGGACGCCTGCCTATACCCCAGCAGCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| 3UTR CCA 72 bp | AGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTaGGAAATGGCTCGGCCGAGTGGGAGAGGGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: RKCSPGRSGTSH*EMARPSGRGCG Trigger: TCCACACCCTCTCCCACTCGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR CCA 90 bp | AGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCGTCACCGCGGCGCCCTaGCTCTGGGGACTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RGTNPSRRLQRWVTEVQGVTAAP*LWGLAQ Trigger: CTGAGCCAGTCCCCAGAGCCAGGGCGCCGCGGTGAC...GCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR GCA 90 bp | CCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTGTGCCGTCGCCCCGGTaGACGGCCTGCAGCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: PSRRLQRWVTEVQGSVLTVPSPR*TACSTL Trigger: CAAAGTGCTGCAGGCCGTGCACCGGGGCGACGGCAC...AGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | AGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCCCTGGAAAGGGTTGGTaGCGTCGCCCCGGTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: RGTNPSRRLQRWVTEVQGPGKGW*RRPGAR Trigger: CCGTGCACCGGGGCGACGGCACCAACCCTTTCCAGG...GCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | CCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTCCCAACAGGGCCAGGTaGGCAGCCACGGACACGATG | + |
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Preference number: 4 (lower is better) Translates to: PSRRLQRWVTEVQGSVLTPNRAR*AATDTM Trigger: CATCGTGTCCGTGGCTGCGCACCTGGCCCTGTTGGG...AGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | CGGCCGAGTGGGAGAGGGTGTGGATGCACGGGAAATGGAAGGGAAGAGGGCTGCCCAGAGGGGTGGAGCTaGTGGTGGCCGAATCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RPSGRGCGCTGNGREEGCPEGWS*WWPNPP Trigger: GGGAGGATTCGGCCACCAGCAGCTCCACCCCTCTGG...GCAGCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR CCA 90 bp | CGGCCGAGTGGGAGAGGGTGTGGATGCACGGGAAATGGAAGGGAAGAGGGCTGCAGGCCTGGAAAGGGTTaGTGCCGTCGCCCCGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RPSGRGCGCTGNGREEGCRPGKG*CRRPGA Trigger: TGCACCGGGGCGACGGCACCAACCCTTTCCAGGCCT...GCAGCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR TCA 90 bp | GAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCACTTTGCGGTAAACCCTaGGAGAGATGGTGGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EAPTPHGASSGGSRKCRALCGKP*ERWWRR Trigger: TCTGCGCCACCATCTCTCTCAGGGTTTACCGCAAAG...TGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | CCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTACGTGGGAGGCGATCTaGTGGGACAAACGTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PSRRLQRWVTEVQGSVLTTWEAI*WDKRSV Trigger: GACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGT...AGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR CCA 90 bp | GAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCACCCAGTCCTGCGATGTaGTCTCCTCCTCTTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: EAPTPHGASSGGSRKCRAPSPAM*SPPLHP Trigger: AGGATGAAGAGGAGGAGACCACATCGCAGGACTGGG...TGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR CCA 90 bp | CACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCATTTTCCAGAGGGGTaGAGCTGCTGGTGGCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: HQPLTAPPAVGHGSAGQRHFPEG*SCWWPN Trigger: ATTCGGCCACCAGCAGCTCCACCCCTCTGGAAAATG...ACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR TCA 90 bp | GGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCCCGGAGTTCGAATCTTaGGATCTTTGTGGGGATGGA | + |
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Preference number: 4 (lower is better) Translates to: GTNPSRRLQRWVTEVQGSPEFES*DLCGDG Trigger: TCCATCCCCACAAAGATCTCAAGATTCGAACTCCGG...GCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR CCA 90 bp | ATAGGGGTTGGTGGCTTCAGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGCCGCTCCCGACGTCCTaGTGTCCTTCCAGTACAACA | + |
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Preference number: 4 (lower is better) Translates to: IGVGGFRGTNPSRRLQRWPLPTS*CPSSTT Trigger: TGTTGTACTGGAAGGACACCAGGACGTCGGGAGCGG...CCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCTGAAGCCACCAACCCCTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR CCA 90 bp | CCCAGCATAGGGGTTGGTGGCTTCAGAGGCACCAACCCCTCACGGCGCCTCCAGAATGCCGTAGCTGTGTaGCTGTGGAGACCACGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PSIGVGGFRGTNPSRRLQNAVAV*LWRPRG Trigger: CCCACGTGGTCTCCACAGCCACACAGCTACGGCATT...CTGGAGGCGCCGTGAGGGGTTGGTGCCTCTGAAGCCACCAACCCCTATGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR TCA 90 bp | AGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCTTGATGTGGCTCAACTaGTTGGTCACCAACCCCACA | + |
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Preference number: 4 (lower is better) Translates to: RGTNPSRRLQRWVTEVQGLMWLN*LVTNPT Trigger: TGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAA...GCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | CCCAGCATAGGGGTTGGTGGCTTCAGAGGCACCAACCCCTCACGGCGCCTCCAGATTCTGATTGGTCTGTaGTATCGAGGCACTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PSIGVGGFRGTNPSRRLQILIGL*YRGTGP Trigger: CGGCCCAGTGCCTCGATAGCACAGACCAATCAGAAT...CTGGAGGCGCCGTGAGGGGTTGGTGCCTCTGAAGCCACCAACCCCTATGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR GCA 90 bp | CAGAGCCTCTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAACCTGGAAAGGGTTGGTaGCGTCGCCCCGGTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: QSLLGNVVRVAQALPTGKPGKGW*RRPGAR Trigger: CCGTGCACCGGGGCGACGGCACCAACCCTTTCCAGG...TTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR CCA 90 bp | GCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCCCGCTGTGGAGACCACGTaGGAGGCGATCTGCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: AVGHGSAGQRPDYSTTSPAVETT*EAICWD Trigger: GTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGC...GGGACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR CCA 90 bp | CCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTTGTGGCTCAACTGATTaGTCACCAACCCCACATACT | + |
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Preference number: 4 (lower is better) Translates to: PSRRLQRWVTEVQGSVLTCGSTD*SPTPHT Trigger: AGTATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...AGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR TCA 90 bp | CAGAGCCTCTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAACGAGGCACTGGGCCGTaGTTGGCTCCTGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QSLLGNVVRVAQALPTGKRGTGP*LAPAPA Trigger: TGCTGGAGCAGGAGCCAATCACGGCCCAGTGCCTCG...TTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR TCA 90 bp | ATAGGGGTTGGTGGCTTCAGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGAGAGAAGAGCCAGCTTaGGAGAATCCACCAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: IGVGGFRGTNPSRRLQRWREEPA*ENPPGL Trigger: AAGACCTGGTGGATTCTCTCAAGCTGGCTCTTCTCT...CCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCTGAAGCCACCAACCCCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | GCTCGGCCGAGTGGGAGAGGGTGTGGATGCACGGGAAATGGAAGGGAAGAGGGCAATTCCCGGGCTGTGTaGAGCTCCCGAAAATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ARPSGRGCGCTGNGREEGNSRAV*SSRKSE Trigger: CTCAGATTTTCGGGAGCTGCACACAGCCCGGGAATT...GCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR GCA 90 bp | CAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCGGGGTGCCCCAGTCCTaGGATGTGGTCTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: QRWVTEVQGSVLTIQLQVGVPQS*DVVSSS Trigger: AGAGGAGGAGACCACATCGCAGGACTGGGGCACCCC...GACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR GCA 90 bp | CTTAGAGCAGAGCCTCTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACCCCAACAGGGCCAGGTaGGCAGCCACGGACACGATG | + |
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Preference number: 4 (lower is better) Translates to: LRAEPLRKCSPGRSGTSHPNRAR*AATDTM Trigger: CATCGTGTCCGTGGCTGCGCACCTGGCCCTGTTGGG...GTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTCTGCTCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR CCA 90 bp | GCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCCCGGAGCTTCTTTGCAGTaGGCGAAGACCGGCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: AVGHGSAGQRPDYSTTSPGASLQ*AKTGRT Trigger: GGTCCTGCCGGTCTTCGCCCACTGCAAAGAAGCTCC...GGGACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR CCA 90 bp | GGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAGCAACATGAATTCTGATTaGTCTGTGCTATCGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GTNPSRRLQRWVTEVQGSNMNSD*SVLSRH Trigger: GTGCCTCGATAGCACAGACCAATCAGAATTCATGTT...GCTGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR CCA 90 bp | CCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTGCTGTGGAGACCACGTaGGAGGCGATCTGCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PAVGHGSAGQRPDYSTTSAVETT*EAICWD Trigger: GTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGC...ACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR TCA 90 bp | AGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGCTTTGCGGTAAACCCTaGGAGAGATGGTGGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RKCSPGRSGTSHWEMARPLCGKP*ERWWRR Trigger: TCTGCGCCACCATCTCTCTCAGGGTTTACCGCAAAG...CGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | GGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGAGACAAACGTTCTGTCTaGTCCCGAGTCAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GNVVRVAQALPTGKWLGRDKRSV*SRVRVR Trigger: CCTGACCCTGACTCGGGAGCAGACAGAACGTTTGTC...TCGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | AGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGACGTGGGAGGCGATCTaGTGGGACAAACGTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RKCSPGRSGTSHWEMARPTWEAI*WDKRSV Trigger: GACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGT...CGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR CCA 90 bp | CCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCCTGGCTCTGGGGACTaGCTCAGGCTAGGGATGCTT | + |
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Preference number: 4 (lower is better) Translates to: PAVGHGSAGQRPDYSTTSPGSGD*LRLGML Trigger: AAGCATCCCTAGCCTGAGCCAGTCCCCAGAGCCAGG...ACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR CCA 90 bp | CAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCACAACCCAGCCAAGCTaGTCCAGCCGCAGCCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QRWVTEVQGSVLTIQLQVTTQPS*SSRSLS Trigger: ACTGAGGCTGCGGCTGGACCAGCTTGGCTGGGTTGT...GACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS-3UTR CCA 90 bp | GCTCGGCCGAGTGGGAGAGGGTGTGGATGCACGGGAAATGGAAGGGAAGAGGGCATTCGGCTTTGGCTTTaGATCCGGAGACTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: ARPSGRGCGCTGNGREEGIRLWL*IRRLML Trigger: CAGCATCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...GCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS-3UTR GCA 90 bp | GCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCCCGACAAACGTTCTGTCTaGTCCCGAGTCAGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGHGSAGQRPDYSTTSPDKRSV*SRVRVR Trigger: CCTGACCCTGACTCGGGAGCAGACAGAACGTTTGTC...GGGACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGCTCCCGACGTCCTaGTGTCCTTCCAGTACAACA | + |
|
Preference number: 4 (lower is better) Translates to: LRKCSPGRSGTSHWEMARPLPTS*CPSSTT Trigger: TGTTGTACTGGAAGGACACCAGGACGTCGGGAGCGG...CCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR TCA 90 bp | AGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGAGAGAAGAGCCAGCTTaGGAGAATCCACCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKCSPGRSGTSHWEMARPREEPA*ENPPGL Trigger: AAGACCTGGTGGATTCTCTCAAGCTGGCTCTTCTCT...CGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR GCA 90 bp | TTCCACAGGACTCTTTATTACAGTGTAAATCCAAGCTCAAGGCTCGCCTGGGCCTCAGCTCCCTGGGGGTaGCCCAGTCCTGCGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHRTLYYSVNPSSRLAWASAPWG*PSPAMW Trigger: CCACATCGCAGGACTGGGGCACCCCCAGGGAGCTGA...GGCCCAGGCGAGCCTTGAGCTTGGATTTACACTGTAATAAAGAGTCCTGTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR GCA 90 bp | GAGCAGAGCCTCTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGGACACGATGCTAAAGTaGAGGAGGCAGAGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLLGNVVRVAQALPTGDTMLK*RRQRRE Trigger: CTCTCTCCTCTGCCTCCTGCACTTTAGCATCGTGTC...CCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGAGAAGAGGCTGTAGATaGAGCTTCTTTGCAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKCSPGRSGTSHWEMARPRRGCR*SFFAVG Trigger: GCCCACTGCAAAGAAGCTCCATCTACAGCCTCTTCT...CGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGGACTCTTTATTACAGTGTAAATCCAAGCTCAAGGCTCGCCTGGGCCGAGGGGTGGAGCTGCTaGTGGCCGAATCCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHRTLYYSVNPSSRLAWAEGWSC*WPNPPQ Trigger: CTGGGGAGGATTCGGCCACCAGCAGCTCCACCCCTC...GGCCCAGGCGAGCCTTGAGCTTGGATTTACACTGTAATAAAGAGTCCTGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR CCA 90 bp | CCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTTGGGAGGCGATCTGCTaGGACAAACGTTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAVGHGSAGQRPDYSTTSWEAIC*DKRSVC Trigger: GCAGACAGAACGTTTGTCCCAGCAGATCGCCTCCCA...ACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCTCTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAACTCCTCTTCATCCTCTaGGAATTCCCGGGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLLGNVVRVAQALPTGKLLFIL*EFPGCV Trigger: CACACAGCCCGGGAATTCTCAGAGGATGAAGAGGAG...TTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR TCA 90 bp | CTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGGGAGCGGCTCCAACATaGATTCTGATTGGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRKCSPGRSGTSHWEMARGAAPT*ILIGLC Trigger: GCACAGACCAATCAGAATTCATGTTGGAGCCGCTCC...CCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR TCA 90 bp | CGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCCCATTGATGTGGCTCAACTaGTTGGTCACCAACCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RWVTEVQGSVLTIQLQVPLMWLN*LVTNPT Trigger: TGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAA...TGGGACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR GCA 90 bp | CCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTTCCACTAGGAAGAAATaGCGTAGCTGTGTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAVGHGSAGQRPDYSTTSSTRKK*RSCVAV Trigger: CACAGCCACACAGCTACGGCATTTCTTCCTAGTGGA...ACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CCA 90 bp | GCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCCCTGTGGCTCAACTGATTaGTCACCAACCCCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: AVGHGSAGQRPDYSTTSPCGSTD*SPTPHT Trigger: AGTATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...GGGACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CCA 90 bp | CGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTCCCAATTCGGCTTTGGCTTTaGATCCGGAGACTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWVTEVQGSVLTIQLQVPIRLWL*IRRLML Trigger: CAGCATCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...TGGGACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTCCTGGACTCTTAGAGCAGAGCCTCTTAGGAAATGTAGTCCGGGTCGCGACACGATGCTAAAGTaGAGGAGGCAGAGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFSWTLRAEPLRKCSPGRDTMLK*RRQRRE Trigger: CTCTCTCCTCTGCCTCCTGCACTTTAGCATCGTGTC...GCGACCCGGACTACATTTCCTAAGAGGCTCTGCTCTAAGAGTCCAGGAAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR GCA 90 bp | CTTAGAGCAGAGCCTCTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTCCACTAGGAAGAAATaGCGTAGCTGTGTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPLRKCSPGRSGTSHSTRKK*RSCVAV Trigger: CACAGCCACACAGCTACGGCATTTCTTCCTAGTGGA...GTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTCTGCTCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCACAGGACTCTTTATTACAGTGTAAATCCAAGCTCAAGGCTCGCCTGGAGGCCTGGAAAGGGTTaGTGCCGTCGCCCCGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFHRTLYYSVNPSSRLAWRPGKG*CRRPGA Trigger: TGCACCGGGGCGACGGCACCAACCCTTTCCAGGCCT...CCAGGCGAGCCTTGAGCTTGGATTTACACTGTAATAAAGAGTCCTGTGGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR TCA 90 bp | AGGACTCTTTATTACAGTGTAAATCCAAGCTCAAGGCTCGCCTGGGCCCCATGCGAGCTAGGGCTAAGTTaGGGAGTCAGGACCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLYYSVNPSSRLAWAPCELGLS*GVRTSS Trigger: ACTTGAGGTCCTGACTCCTCAACTTAGCCCTAGCTC...GCATGGGGCCCAGGCGAGCCTTGAGCTTGGATTTACACTGTAATAAAGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCACAGGACTCTTTATTACAGTGTAAATCCAAGCTCAAGGCTCGCCTGGGGGTGGAGCTGCTGGTaGCCGAATCCTCCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IFHRTLYYSVNPSSRLAWGWSCW*PNPPQI Trigger: GATCTGGGGAGGATTCGGCCACCAGCAGCTCCACCC...CCAGGCGAGCCTTGAGCTTGGATTTACACTGTAATAAAGAGTCCTGTGGAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTACAGTGTAAATCCAAGCTCAAGGCTCGCCTGGGCCCCATGCAAAGCTGGGAGGCGATCTGCTaGGACAAACGTTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQCKSKLKARLGPMQSWEAIC*DKRSVC Trigger: GCAGACAGAACGTTTGTCCCAGCAGATCGCCTCCCA...GCTTTGCATGGGGCCCAGGCGAGCCTTGAGCTTGGATTTACACTGTAATAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS CCA 90 bp | GGAGGCACGGGGTCAGGGTCACCGCGGCGCCCTGGCTCTGGGGACTaGCTCAGGCTAGGGATGCTTTCCAAGCTGTCACCCAGGCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGTGSGSPRRPGSGD*LRLGMLSKLSPRPD Trigger: GTCCGGCCTGGGTGACAGCTTGGAAAGCATCCCTAGCCTGAGCCAGTCCCCAGAGCCAGGGCGCCGCGGTGACCCTGACCCCGTGCCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS CCA 90 bp | CGGGCGCTCAGCTGGAGGCACGGGGTCAGGGTCACCGCGGCGCCCTaGCTCTGGGGACTGGCTCAGGCTAGGGATGCTTTCCAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RALSWRHGVRVTAAP*LWGLAQARDAFQAV Trigger: GACAGCTTGGAAAGCATCCCTAGCCTGAGCCAGTCCCCAGAGCCAGGGCGCCGCGGTGACCCTGACCCCGTGCCTCCAGCTGAGCGCCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS CCA 90 bp | CTCAGCTGGAGGCACGGGGTCAGGGTCACCGCGGCGCCCTGGCTCTaGGGACTGGCTCAGGCTAGGGATGCTTTCCAAGCTGTCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSWRHGVRVTAAPWL*GLAQARDAFQAVTQ Trigger: CTGGGTGACAGCTTGGAAAGCATCCCTAGCCTGAGCCAGTCCCCAGAGCCAGGGCGCCGCGGTGACCCTGACCCCGTGCCTCCAGCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS CCA 90 bp | GCCGAATCCTCCCCAGATCCCGCACTCCGGACAACCCAGCCAAGCTaGTCCAGCCGCAGCCTCAGTTCCTCCAGCGGGCGCTCAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AESSPDPALRTTQPS*SSRSLSSSSGRSAG Trigger: TCCAGCTGAGCGCCCGCTGGAGGAACTGAGGCTGCGGCTGGACCAGCTTGGCTGGGTTGTCCGGAGTGCGGGATCTGGGGAGGATTCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS TCA 90 bp | TGCCGTCGCCCCGGTGCACGGCCTGCAGCACTTTGCGGTAAACCCTaGGAGAGATGGTGGCGCAGAGACCCAACAGGGCCAGGTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRRPGARPAALCGKP*ERWWRRDPTGPGAQ Trigger: CTGCGCACCTGGCCCTGTTGGGTCTCTGCGCCACCATCTCTCTCAGGGTTTACCGCAAAGTGCTGCAGGCCGTGCACCGGGGCGACGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS CCA 90 bp | CTCAGGCTAGGGATGCTTTCCAAGCTGTCACCCAGGCCGGACTGTTaGGGTGGGTCCCGTGGTTCTGAGACTGAACGTCCCTGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRLGMLSKLSPRPDC*GGSRGSETERPWGR Trigger: CCGGCCCCAGGGACGTTCAGTCTCAGAACCACGGGACCCACCCCAACAGTCCGGCCTGGGTGACAGCTTGGAAAGCATCCCTAGCCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR CAA 90 bp | GAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGGTCACGGAAGTGCAGGGCAAAGAGAAGAGCCAGCTaGAGAGAATCCACCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EAPTPHGASSGGSRKCRAKRRAS*RESTRS Trigger: AGACCTGGTGGATTCTCTCAAGCTGGCTCTTCTCTT...TGCCCTGCACTTCCGTGACCCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CAA 90 bp | GGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCCGACGGAGACTGATGCTGTaGGGGCAAGGGTTCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNVVRVAQALPTGKWLGRRRLML*GQGFRS Trigger: GGACCGGAACCCTTGCCCCAACAGCATCAGTCTCCG...TCGGCCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS CCA 90 bp | TGCCGTAGCTGTGTGGCTGTGGAGACCACGTGGGAGGCGATCTGCTaGGACAAACGTTCTGTCTGCTCCCGAGTCAGGGTCAGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CRSCVAVETTWEAIC*DKRSVCSRVRVRSM Trigger: CATGGACCTGACCCTGACTCGGGAGCAGACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGCCACACAGCTACGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CAA 90 bp | ATAGGGGTTGGTGGCTTCAGAGGCACCAACCCCTCACGGCGCCTCCAGCGGTGGCATTCGGCTTTGGCTTaGGATCCGGAGACTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGVGGFRGTNPSRRLQRWHSALA*DPETDA Trigger: AGCATCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...CCACCGCTGGAGGCGCCGTGAGGGGTTGGTGCCTCTGAAGCCACCAACCCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS GCA 90 bp | CCACGCCGTCGAAGGCAATGTAGGAAAAGGTCAGCTCCCTGGGGGTaGCCCAGTCCTGCGATGTGGTCTCCTCCTCTTCATCCTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRRRRQCRKRSAPWG*PSPAMWSPPLHPLR Trigger: TCTCAGAGGATGAAGAGGAGGAGACCACATCGCAGGACTGGGGCACCCCCAGGGAGCTGACCTTTTCCTACATTGCCTTCGACGGCGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS GCA 90 bp | AAATGCCGTAGCTGTGTGGCTGTGGAGACCACGTGGGAGGCGATCTaGTGGGACAAACGTTCTGTCTGCTCCCGAGTCAGGGTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KCRSCVAVETTWEAI*WDKRSVCSRVRVRS Trigger: GGACCTGACCCTGACTCGGGAGCAGACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGCCACACAGCTACGGCATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CAA 90 bp | GCTCGGCCGAGTGGGAGAGGGTGTGGATGCACGGGAAATGGAAGGGAAGAGGGCAAGAGAAGAGCCAGCTaGAGAGAATCCACCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARPSGRGCGCTGNGREEGKRRAS*RESTRS Trigger: AGACCTGGTGGATTCTCTCAAGCTGGCTCTTCTCTT...GCCCTCTTCCCTTCCATTTCCCGTGCATCCACACCCTCTCCCACTCGGCCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS GCA 90 bp | TCTGATTGGTCTGTGCTATCGAGGCACTGGGCCGTGATTGGCTCCTaGTCCAGCAGCCGCCAATGCTCTTCTACCACATTCAGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDWSVLSRHWAVIGS*SSSRQCSSTTFSRG Trigger: GCCTCTGCTGAATGTGGTAGAAGAGCATTGGCGGCTGCTGGAGCAGGAGCCAATCACGGCCCAGTGCCTCGATAGCACAGACCAATCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS CCA 90 bp | TCCACTAGGAAGAAATGCCGTAGCTGTGTGGCTGTGGAGACCACGTaGGAGGCGATCTGCTGGGACAAACGTTCTGTCTGCTCCCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: STRKKCRSCVAVETT*EAICWDKRSVCSRV Trigger: GACTCGGGAGCAGACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGCCACACAGCTACGGCATTTCTTCCTAGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS CCA 90 bp | CCACCAGGTCTTCCACTAGGAAGAAATGCCGTAGCTGTGTGGCTGTaGAGACCACGTGGGAGGCGATCTGCTGGGACAAACGTTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPGLPLGRNAVAVWL*RPRGRRSAGTNVLS Trigger: AGACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGCCACACAGCTACGGCATTTCTTCCTAGTGGAAGACCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS-3UTR CAA 90 bp | CTTAGGAAATGTAGTCCGGGTCGCTCAGGCACTTCCCACTGGGAAATGGCTCGGCATTCGGCTTTGGCTTaGGATCCGGAGACTGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRKCSPGRSGTSHWEMARHSALA*DPETDA Trigger: AGCATCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...CCGAGCCATTTCCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS GCA 90 bp | GATGTGGTCTCCTCCTCTTCATCCTCTGAGAATTCCCGGGCTGTGTaGAGCTCCCGAAAATCTGAGTCGTCATTCCCTCCTTCCGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DVVSSSSSSENSRAV*SSRKSESSFPPSVE Trigger: TTCCACGGAAGGAGGGAATGACGACTCAGATTTTCGGGAGCTGCACACAGCCCGGGAATTCTCAGAGGATGAAGAGGAGGAGACCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR CAA 90 bp | AGGACTCTTTATTACAGTGTAAATCCAAGCTCAAGGCTCGCCTGGGCCCCATGCGTAGATGGAGCTTCTTaGCAGTGGGCGAAGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTLYYSVNPSSRLAWAPCVDGAS*QWAKTG Trigger: GCCGGTCTTCGCCCACTGCAAAGAAGCTCCATCTAC...GCATGGGGCCCAGGCGAGCCTTGAGCTTGGATTTACACTGTAATAAAGAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS-3UTR CAA 90 bp | CCAGCGGTGGGTCACGGAAGTGCAGGGCAGCGTCCTGACTATTCAACTACAAGTACCGGAGTTCGAATCTaGAGATCTTTGTGGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PAVGHGSAGQRPDYSTTSTGVRI*RSLWGW Trigger: CCATCCCCACAAAGATCTCAAGATTCGAACTCCGGT...ACTTGTAGTTGAATAGTCAGGACGCTGCCCTGCACTTCCGTGACCCACCGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS TCA 90 bp | AGATGGCTCCCACAAAGGTCAAGATGTAGAAGAGAAGAGCCAGCTTaGGAGAATCCACCAGGTCTTCCACTAGGAAGAAATGCCGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWLPQRSRCRREEPA*ENPPGLPLGRNAVA Trigger: AGCTACGGCATTTCTTCCTAGTGGAAGACCTGGTGGATTCTCTCAAGCTGGCTCTTCTCTTCTACATCTTGACCTTTGTGGGAGCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
||
| CDS CCA 72 bp | CAGCCGCAGCCTCAGTTCCTCCAGCGGGCGCTCAGCTaGAGGCACGGGGTCAGGGTCACCGCGGCGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPQPQFLQRALS*RHGVRVTAAPW Trigger: CCAGGGCGCCGCGGTGACCCTGACCCCGTGCCTCCAGCTGAGCGCCCGCTGGAGGAACTGAGGCTGCGGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS CCA 72 bp | TCCCCAGATCCCGCACTCCGGACAACCCAGCCAAGCTaGTCCAGCCGCAGCCTCAGTTCCTCCAGCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SPDPALRTTQPS*SSRSLSSSSGR Trigger: GCGCCCGCTGGAGGAACTGAGGCTGCGGCTGGACCAGCTTGGCTGGGTTGTCCGGAGTGCGGGATCTGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS CCA 72 bp | GGGTCAGGGTCACCGCGGCGCCCTGGCTCTGGGGACTaGCTCAGGCTAGGGATGCTTTCCAAGCTGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GSGSPRRPGSGD*LRLGMLSKLSP Trigger: GGGTGACAGCTTGGAAAGCATCCCTAGCCTGAGCCAGTCCCCAGAGCCAGGGCGCCGCGGTGACCCTGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
||
| CDS GCA 72 bp | TCAGGTCCATGTCCAGGTAGGCCTGGAAAGGGTTGGTaGCGTCGCCCCGGTGCACGGCCTGCAGCACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SGPCPGRPGKGW*RRPGARPAALC Trigger: GCAAAGTGCTGCAGGCCGTGCACCGGGGCGACGGCACCAACCCTTTCCAGGCCTACCTGGACATGGACCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS TCA 72 bp | CCCGGTGCACGGCCTGCAGCACTTTGCGGTAAACCCTaGGAGAGATGGTGGCGCAGAGACCCAACAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGARPAALCGKP*ERWWRRDPTGP Trigger: TGGCCCTGTTGGGTCTCTGCGCCACCATCTCTCTCAGGGTTTACCGCAAAGTGCTGCAGGCCGTGCACCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS CCA 72 bp | AGGTCAGCTCCCTGGGGGTGCCCCAGTCCTGCGATGTaGTCTCCTCCTCTTCATCCTCTGAGAATTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RSAPWGCPSPAM*SPPLHPLRIPG Trigger: CCCGGGAATTCTCAGAGGATGAAGAGGAGGAGACCACATCGCAGGACTGGGGCACCCCCAGGGAGCTGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS CCA 72 bp | GGGATGCTTTCCAAGCTGTCACCCAGGCCGGACTGTTaGGGTGGGTCCCGTGGTTCTGAGACTGAACGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GMLSKLSPRPDC*GGSRGSETERP Trigger: GGGACGTTCAGTCTCAGAACCACGGGACCCACCCCAACAGTCCGGCCTGGGTGACAGCTTGGAAAGCATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS GCA 72 bp | AGCTGTGTGGCTGTGGAGACCACGTGGGAGGCGATCTaGTGGGACAAACGTTCTGTCTGCTCCCGAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SCVAVETTWEAI*WDKRSVCSRVR Trigger: CCTGACTCGGGAGCAGACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGCCACACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS CCA 72 bp | TGTGTGGCTGTGGAGACCACGTGGGAGGCGATCTGCTaGGACAAACGTTCTGTCTGCTCCCGAGTCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: CVAVETTWEAIC*DKRSVCSRVRV Trigger: GACCCTGACTCGGGAGCAGACAGAACGTTTGTCCCAGCAGATCGCCTCCCACGTGGTCTCCACAGCCACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS GCA 72 bp | TCTGTGCTATCGAGGCACTGGGCCGTGATTGGCTCCTaGTCCAGCAGCCGCCAATGCTCTTCTACCACATTC | + |
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Preference number: 6 (lower is better) Translates to: SVLSRHWAVIGS*SSSRQCSSTTF Trigger: GAATGTGGTAGAAGAGCATTGGCGGCTGCTGGAGCAGGAGCCAATCACGGCCCAGTGCCTCGATAGCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS GCA 72 bp | TGGGCCGTGATTGGCTCCTGCTCCAGCAGCCGCCAATaGTCTTCTACCACATTCAGCAGAGGCTCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: WAVIGSCSSSRQ*SSTTFSRGSSS Trigger: TGATGATGAGCCTCTGCTGAATGTGGTAGAAGAGCATTGGCGGCTGCTGGAGCAGGAGCCAATCACGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS TCA 72 bp | AGCAGAGGCTCATCATCAGGACCGGAGTTCGAATCTTaGGATCTTTGTGGGGATGGAGTATGCGCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SRGSSSGPEFES*DLCGDGVCAWG Trigger: CCCCCAGGCGCATACTCCATCCCCACAAAGATCTCAAGATTCGAACTCCGGTCCTGATGATGAGCCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS CCA 72 bp | GTCGGAGTTCCAGATTCGTCTCTTCTCCAGCCTCGCTaGCCTCCAATCCATCAGGCTCCTCATTTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VGVPDSSLLQPR*PPIHQAPHFPE Trigger: CTCTGGAAAATGAGGAGCCTGATGGATTGGAGGCCAGCGAGGCTGGAGAAGAGACGAATCTGGAACTCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS CCA 72 bp | AACATGAATTCTGATTGGTCTGTGCTATCGAGGCACTaGGCCGTGATTGGCTCCTGCTCCAGCAGCCGCCAA | + |
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Preference number: 6 (lower is better) Translates to: NMNSDWSVLSRH*AVIGSCSSSRQ Trigger: TTGGCGGCTGCTGGAGCAGGAGCCAATCACGGCCCAGTGCCTCGATAGCACAGACCAATCAGAATTCATGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS CAA 72 bp | CAGCAGAGGCTCATCATCAGGACCGGAGTTCGAATCTaGAGATCTTTGTGGGGATGGAGTATGCGCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QQRLIIRTGVRI*RSLWGWSMRLG Trigger: CCCCAGGCGCATACTCCATCCCCACAAAGATCTCAAGATTCGAACTCCGGTCCTGATGATGAGCCTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS GCA 72 bp | TCCTCCTCTTCATCCTCTGAGAATTCCCGGGCTGTGTaGAGCTCCCGAAAATCTGAGTCGTCATTCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSENSRAV*SSRKSESSFPP Trigger: AGGAGGGAATGACGACTCAGATTTTCGGGAGCTGCACACAGCCCGGGAATTCTCAGAGGATGAAGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032559.17 |
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| CDS CAA 72 bp | CACCAACCCCACATACTGGTCAATCTGGGCCTGATGTaGTCTGTACAGAAGGGGGACGGTAAACAAAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: HQPHILVNLGLM*SVQKGDGKQSN Trigger: GTTGCTTTGTTTACCGTCCCCCTTCTGTACAGACAACATCAGGCCCAGATTGACCAGTATGTGGGGTTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS TCA 72 bp | TTGGTCACCAACCCCACATACTGGTCAATCTGGGCCTaGTGTTGTCTGTACAGAAGGGGGACGGTAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: LVTNPTYWSIWA*CCLYRRGTVNK Trigger: TTTGTTTACCGTCCCCCTTCTGTACAGACAACATCAGGCCCAGATTGACCAGTATGTGGGGTTGGTGACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS TCA 72 bp | ATCTTAGCTCGGATCTTAGCTTTGATGTGGCTCAACTaGTTGGTCACCAACCCCACATACTGGTCAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILARILALMWLN*LVTNPTYWSIW Trigger: CCAGATTGACCAGTATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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| CDS TCA 72 bp | CCACAAAGGTCAAGATGTAGAAGAGAAGAGCCAGCTTaGGAGAATCCACCAGGTCTTCCACTAGGAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: PQRSRCRREEPA*ENPPGLPLGRN Trigger: ATTTCTTCCTAGTGGAAGACCTGGTGGATTCTCTCAAGCTGGCTCTTCTCTTCTACATCTTGACCTTTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032559.17 ENSMUST00000108468.5 |
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