Pregenerated sensors for RTN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021087Ensembl transcript IDs: ENSMUST00000021497.16, ENSMUST00000078505.14, ENSMUST00000137990.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAACCCAAGGACATGATAAGCGATCCACTATGTGTCAGCGCACTTaGCAAGAAAGGCCTAGCCACAGGGACAGTAGAAGCTACAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: ATQGHDKRSTMCQRT*QERPSHRDSRSYRS Trigger: GCTTCTGTAGCTTCTACTGTCCCTGTGGCTAGGCCTTTCTTGCCAAGTGCGCTGACACATAGTGGATCGCTTATCATGTCCTTGGGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCTCTCACCATCATGCACTTGCTTGACACGGGGGTaGGGAGGGGGCGGCTCATAT | + |
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Preference number: 2 (lower is better) Translates to: EGRTSREEGERGLSPSCTCLTRG*GGGGSY Trigger: ATATGAGCCGCCCCCTCCCCACCCCCGTGTCAAGCA...AGTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCCACAGGGACAGTAGAAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGGGAGGAGGGAGAACGTaGGCTCTCACCATCATGCAC | + |
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Preference number: 2 (lower is better) Translates to: PSHRDSRSYRSVAEGRTSGGGRT*ALTIMH Trigger: GTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCC...CGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTTCTACTGTCCCTGTGGCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR-3UTR GCA 90 bp | AAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGGGAAACAATCAATTTaGAGTAACGAGGAAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KLQKRCRGEDIEGGGRTWGKQSI*SNEEGE Trigger: CTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCC...CCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR-3UTR CCA 90 bp | AAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGTTGCCTCTAAGATTATaGTACCAGGAAAGGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: KLQKRCRGEDIEGGGRTWLPLRL*YQERET Trigger: TGTTTCCCTTTCCTGGTACCATAATCTTAGAGGCAA...CCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCCACAGGGACAGTAGAAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGTTGCCTCTAAGATTATaGTACCAGGAAAGGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: PSHRDSRSYRSVAEGRTSLPLRL*YQERET Trigger: TGTTTCCCTTTCCTGGTACCATAATCTTAGAGGCAA...CGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTTCTACTGTCCCTGTGGCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR CAA 90 bp | TATCCTAAGAGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTaGCCTCTAAGATTATGGTACCAGGAAAGGGAAACAATCAATTTG | + |
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Preference number: 2 (lower is better) Translates to: YPKSTGRASKHLSQS*PLRLWYQERETINL Trigger: CAAATTGATTGTTTCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACTCTTAGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| 3UTR CCA 72 bp | GGACATGATAAGCGATCCACTATGTGTCAGCGCACTTaGCAAGAAAGGCCTAGCCACAGGGACAGTAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: GHDKRSTMCQRT*QERPSHRDSRS Trigger: GCTTCTACTGTCCCTGTGGCTAGGCCTTTCTTGCCAAGTGCGCTGACACATAGTGGATCGCTTATCATGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR-3UTR CAA 90 bp | CAGTATCAAGTACATAAGTGCAAATATCCAGAGTCTGTGATTGAGTCCATTAGGGAAGCTACAGAAGCGTaGCAGAGGGGAGGACATCGA | + |
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Preference number: 3 (lower is better) Translates to: QYQVHKCKYPESVIESIREATEA*QRGGHR Trigger: TCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTTC...CCTAATGGACTCAATCACAGACTCTGGATATTTGCACTTATGTACTTGATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| 3UTR TCA 72 bp | AGTATCAAGTACATAAGTGCAAATATCCAGAGTCTGTaGTTGAGTCCATTAGGAACTACAGAGGAAGTAATA | + |
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Preference number: 3 (lower is better) Translates to: SIKYISANIQSL*LSPLGTTEEVI Trigger: TATTACTTCCTCTGTAGTTCCTAATGGACTCAATCACAGACTCTGGATATTTGCACTTATGTACTTGATACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | GAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGGTGACCCCATCCTGCTGCGCTaGCCTGGCCCCCATCACCGC | + |
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Preference number: 4 (lower is better) Translates to: ELLPLQTPPLMSGFSWGDPILLR*PGPHHR Trigger: GCGGTGATGGGGGCCAGGCCAGCGCAGCAGGATGGG...GTCACCCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | GAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGGTGACTGCATGGTGCGGGCTTaGCGGGCTCGCCGTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ELLPLQTPPLMSGFSWGDCMVRA*RARRGS Trigger: AGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCA...GTCACCCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
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| CDS-3UTR GCA 90 bp | ACAGGGACAGTAGAAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGGGCTCCCCATCCTGCTaGGCTGGCCTGGCCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: TGTVEATEALQRGGHRGRGSPSC*AGLAPI Trigger: GATGGGGGCCAGGCCAGCGCAGCAGGATGGGGAGCC...CCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTTCTACTGTCCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | AAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGCCTGGTCGAGGGGACTaGGGATGGTGGGCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KLQKRCRGEDIEGGGRTWPGRGD*GWWAAQ Trigger: CTGGGCTGCCCACCATCCCCAGTCCCCTCGACCAGG...CCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR GCA 90 bp | GGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCTCTCACCATCATGCACTTTTCTCCGGACTCGGCACTaGTGGCCTCCTGGTCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRTSREEGERGLSPSCTFLRTRH*WPPGRG Trigger: CCCTCGACCAGGAGGCCAGCAGTGCCGAGTCCGGAG...AAAAGTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCCCTCGATGTCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR TCA 90 bp | AAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCAGGGTCAGGCCATTaGAGAGCGCGCCAACGTAGG | + |
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Preference number: 4 (lower is better) Translates to: KLQKRCRGEDIEGGGRTWAGSGH*RARQRR Trigger: CCTACGTTGGCGCGCTCTTCAATGGCCTGACCCTGC...CCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| CDS-3UTR GCA 90 bp | GAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCTCTCACCATCATGCACTCATCCTCGGAGACGCTaGCTTTCCCCTGGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: EGRTSREEGERGLSPSCTHPRRR*LSPGTL Trigger: CAGAGTCCCAGGGGAAAGGCAGCGTCTCCGAGGATG...AGTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | CCTAGCCACAGGGACAGTAGAAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGGGGGACTGGGGATGGTaGGCAGCCCAGACCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PSHRDSRSYRSVAEGRTSGDWGW*AAQTWS Trigger: AGACCAGGTCTGGGCTGCCCACCATCCCCAGTCCCC...CGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTTCTACTGTCCCTGTGGCTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR TCA 90 bp | GGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGGTGGCCGTGGGACTTTaGCTGGAACTCACAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GESCYHSRHPHSCPASPGVAVGL*LELTAS Trigger: GGAAGCTGTGAGTTCCAGTCAAAGTCCCACGGCCAC...CCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR GCA 90 bp | ACCACATCTAACACACTCTATACTTTAGTGCTTGACACGGGGGTGGGGAGGGGGATCGGGGGCGAGTCCTaGTCGCGCTTGGGGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TTSNTLYTLVLDTGVGRGIGGES*SRLGLS Trigger: GGAGAGCCCCAAGCGCGAGCAGGACTCGCCCCCGAT...CCCCCTCCCCACCCCCGTGTCAAGCACTAAAGTATAGAGTGTGTTAGATGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | AAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGGGTGTTGCTCCTCCTaGCCTTTTGCCTCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KLQKRCRGEDIEGGGRTWGCCSS*PFASCG Trigger: GCCACAGGAGGCAAAAGGCCAGGAGGAGCAACACCC...CCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGACGCTGCCTTTCCCCTaGGACTCTGCAGCAGATGGT | + |
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Preference number: 4 (lower is better) Translates to: GESCYHSRHPHSCPASPGTLPFP*DSAADG Trigger: ACCATCTGCTGCAGAGTCCCAGGGGAAAGGCAGCGT...CCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | AGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCACTGCTGGCCTCCTaGTCGAGGGGACTGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: SNEEGESCYHSRHPHSCPALLAS*SRGLGM Trigger: CATCCCCAGTCCCCTCGACCAGGAGGCCAGCAGTGC...CGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR TCA 90 bp | AGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTCCTGGGACAGGGTaGTCTCCAGCTCCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SNEEGESCYHSRHPHSCPAPGTG*SPAPGR Trigger: CCTACCTGGAGCTGGAGATCACCCTGTCCCAGGAGC...CGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGCACAGTCCATCTTGGTaGAATCGGCAGTGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GESCYHSRHPHSCPASPGHSPSW*NRQWPA Trigger: TGCAGGCCACTGCCGATTCCACCAAGATGGACTGTG...CCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000137990.2 |
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| CDS-3UTR CCA 90 bp | GAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGGGAATCCACCAGGTCCTaGACCAGGAAAAGCCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: ERAVTTPDTPTHVRLLLGESTRS*TRKSLR Trigger: ACGGAGGCTTTTCCTGGTCCAGGACCTGGTGGATTC...CCCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS-3UTR CCA 90 bp | GAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGGTGACAGGCGTGACAGATCCTaGGCTGTCATCTTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ELLPLQTPPLMSGFSWGDRRDRS*AVIFRL Trigger: GAGCCTGAAGATGACAGCCCAGGATCTGTCACGCCT...GTCACCCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | GGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTCCTGCTGCGCTGGCCTaGCCCCCATCACCGCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: GTRKGKQSICSNEEGESCPAALA*PPSPPS Trigger: CGACGGCGGTGATGGGGGCCAGGCCAGCGCAGCAGG...ACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR GCA 90 bp | GGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCTCTCACCATCATGCACTTTTTGCCATACCTGTGGATaGAGTTTCCATGGCGACGGG | + |
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Preference number: 4 (lower is better) Translates to: GRTSREEGERGLSPSCTFCHTCG*SFHGDG Trigger: CCCGTCGCCATGGAAACTGCATCCACAGGTATGGCA...AAAAGTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCCCTCGATGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | ACTTGGCAAGAAAGGCCTAGCCACAGGGACAGTAGAAGCTACAGAAGCGTTGCATGGATGCAGTTTCCATaGCGACGGGAGGCGACCGGG | + |
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Preference number: 4 (lower is better) Translates to: TWQERPSHRDSRSYRSVAWMQFP*RREATG Trigger: CCCGGTCGCCTCCCGTCGCCATGGAAACTGCATCCA...TGCAACGCTTCTGTAGCTTCTACTGTCCCTGTGGCTAGGCCTTTCTTGCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | AGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCGTTGAAGAGGGAGAGTaGTCGAGGGCATCGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: RKERAVTTPDTPTHVRLLVEEGE*SRASGT Trigger: TGTTCCCGATGCCCTCGACCACTCTCCCTCTTCAAC...GAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | GAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCTCTCACCATCATGCACTGGACTCTGCAGCAGATaGTTCTGTTCCAGAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: EGRTSREEGERGLSPSCTGLCSR*FCSRRW Trigger: CCATCTTCTGGAACAGAACCATCTGCTGCAGAGTCC...AGTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR TCA 90 bp | TGTCAGCGCACTTGGCAAGAAAGGCCTAGCCACAGGGACAGTAGAAGCTACAGACGACGCTCACAACGCTaGACTGGGTCAGGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: CQRTWQERPSHRDSRSYRRRSQR*TGSGRR Trigger: TCTTCTCCCTGACCCAGTTCAGCGTTGTGAGCGTCG...TCTGTAGCTTCTACTGTCCCTGTGGCTAGGCCTTTCTTGCCAAGTGCGCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| CDS-3UTR TCA 90 bp | GGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGAGGTCAGGAGCCACATaGGGACTGCAAATTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: GESCYHSRHPHSCPASPGRSGAT*GLQILR Trigger: CCTTAAAATTTGCAGTCCTCATGTGGCTCCTGACCT...CCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS-3UTR TCA 90 bp | AGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGCAGAAGATGGAGGCGTaGCAGATCCTGGGCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SNEEGESCYHSRHPHSCPQKMEA*QILGCH Trigger: ATGACAGCCCAGGATCTGTCACGCCTCCATCTTCTG...CGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR GCA 90 bp | ACAGGGACAGTAGAAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGGTGTACTTCTGGATCTaGTCCTGGGACAGGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: TGTVEATEALQRGGHRGRVYFWI*SWDRVI Trigger: GATCACCCTGTCCCAGGAGCAGATCCAGAAGTACAC...CCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTTCTACTGTCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| CDS-3UTR GCA 90 bp | ATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTCAGTGGCCTGCATGGTaGGGGCTTGGCGGGCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: MVPGKGNNQFAVTRKERAQWPAW*GLGGLA Trigger: GGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTG...AGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
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| CDS-3UTR CCA 90 bp | AACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTACACACAGTCCATCTTaGTGGAATCGGCAGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NEEGESCYHSRHPHSCPATHSPS*WNRQWP Trigger: AGGCCACTGCCGATTCCACCAAGATGGACTGTGTGT...AGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000137990.2 |
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| CDS-3UTR CCA 90 bp | GAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCAGTCTGTGTACTTCTaGATCTGCTCCTGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: EEGESCYHSRHPHSCPASQSVYF*ICSWDR Trigger: CCTGTCCCAGGAGCAGATCCAGAAGTACACAGACTG...AGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCTGGGGCCTTTTGCCTCCTGTaGCCTGGTTATGTCAATGTA | + |
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Preference number: 4 (lower is better) Translates to: GESCYHSRHPHSCPASPGAFCLL*PGYVNV Trigger: TACATTGACATAACCAGGCCACAGGAGGCAAAAGGC...CCCAGGAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR TCA 90 bp | AAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGAGGTCAGGAGCCACATaGGGACTGCAAATTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: KLQKRCRGEDIEGGGRTWRSGAT*GLQILR Trigger: CCTTAAAATTTGCAGTCCTCATGTGGCTCCTGACCT...CCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTAACACAATCCCAGTCTaGTTGATGTCCCGCCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: EEGESCYHSRHPHSCPASNTIPV*LMSRQY Trigger: GTACTGGCGGGACATCAAGCAGACTGGGATTGTGTT...AGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS-3UTR CCA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCTCTGCTGCTGTGATCTaGGCGGCTCCGGGACCGAGG | + |
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Preference number: 4 (lower is better) Translates to: NNQFAVTRKERAVTTPDTSAAVI*AAPGPR Trigger: CCTCGGTCCCGGAGCCGCCCAGATCACAGCAGCAGA...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR CCA 90 bp | TGTCAGCGCACTTGGCAAGAAAGGCCTAGCCACAGGGACAGTAGAAGCTACAGAGAGGCCAGAACCAAGTaGTCCAGGAATTTCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CQRTWQERPSHRDSRSYREARTK*SRNFGG Trigger: GCCACCGAAATTCCTGGACCACTTGGTTCTGGCCTC...TCTGTAGCTTCTACTGTCCCTGTGGCTAGGCCTTTCTTGCCAAGTGCGCTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS-3UTR TCA 90 bp | GGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTGCTCCTGGGACAGGGTaGTCTCCAGCTCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTRKGKQSICSNEEGESCAPGTG*SPAPGR Trigger: CCTACCTGGAGCTGGAGATCACCCTGTCCCAGGAGC...ACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCCCTGACTTTTCCAGTTaGTCCACACACAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RKERAVTTPDTPTHVRLLPDFSS*STHSPS Trigger: AGATGGACTGTGTGTGGAGCAACTGGAAAAGTCAGG...GAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGACAGTAGAAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGCCCCTTCTGCTTTTGTaGAGACTTCAGTGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGTVEATEALQRGGHRGRPLLLL*RLQCPC Trigger: ACAAGGACACTGAAGTCTCCACAAAAGCAGAAGGGG...CCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTTCTACTGTCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | TGTCAGCGCACTTGGCAAGAAAGGCCTAGCCACAGGGACAGTAGAAGCTACAGATGGGCAGCCCAGACCTaGTCTTGGTTTTGGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQRTWQERPSHRDSRSYRWAAQT*SWFWVC Trigger: ACAAACCCAAAACCAAGACCAGGTCTGGGCTGCCCA...TCTGTAGCTTCTACTGTCCCTGTGGCTAGGCCTTTCTTGCCAAGTGCGCTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | TATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCAGTCCTGCTCGCGCTTaGGGCTCTCCTCCGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YGTRKGKQSICSNEEGESSPARA*GSPPRL Trigger: CAGCCTCGGAGGAGAGCCCCAAGCGCGAGCAGGACT...GCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTGCTCCTGGGACAGGGTaGTCTCCAGCTCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKGNNQFAVTRKERAVTTAPGTG*SPAPGR Trigger: CCTACCTGGAGCTGGAGATCACCCTGTCCCAGGAGC...AGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR TCA 90 bp | TATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCGCAGGGTCAGGCCATTaGAGAGCGCGCCAACGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YGTRKGKQSICSNEEGESAGSGH*RARQRR Trigger: CCTACGTTGGCGCGCTCTTCAATGGCCTGACCCTGC...GCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACGCAGGGTCAGGCCATTaGAGAGCGCGCCAACGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGRASKHLSQSLPLRLWYAGSGH*RARQRR Trigger: CCTACGTTGGCGCGCTCTTCAATGGCCTGACCCTGC...GTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCTCTTCAGGCTTCTGCTaGTGTGATCTGGGCGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNQFAVTRKERAVTTPDTSSGFC*CDLGGS Trigger: GGAGCCGCCCAGATCACAGCAGCAGAAGCCTGAAGA...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | AAGAGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTAGAATCGGCAGTGGCCTaGATGGTGCGGGCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSTGRASKHLSQSLPLRLESAVA*MVRAWR Trigger: CCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTC...TAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | TATAGTGTTATTAGAGATGAATCCATCCAGCAACCCAAGGACATGATAAGCGATCGGACTCGGCACTGCTaGCCTCCTGGTCGAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YSVIRDESIQQPKDMISDRTRHC*PPGRGD Trigger: GTCCCCTCGACCAGGAGGCCAGCAGTGCCGAGTCCG...ATCGCTTATCATGTCCTTGGGTTGCTGGATGGATTCATCTCTAATAACACTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | TATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGGTGGAATCGGCAGTaGCCTGCATGGTGCGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YGTRKGKQSICSNEEGESWWNRQ*PAWCGL Trigger: AAGCCCGCACCATGCAGGCCACTGCCGATTCCACCA...GCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCAGGCTCTGAGACAGTaGCAGTGGGCACTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKGNNQFAVTRKERAVTTQALRQ*QWALCQ Trigger: CTGACACAGTGCCCACTGTCACTGTCTCAGAGCCTG...AGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | GTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTGCTCCTCCCGCAGGATaGTGTACTGGATGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGKGNNQFAVTRKERAVAPPAG*CTGWME Trigger: CTCCATCCATCCAGTACAGCATCCTGCGGGAGGAGC...AACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | GGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTCGCAGGATGCTGTACTaGATGGATGGAGAGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTRKGKQSICSNEEGESCRRMLY*MDGEAG Trigger: TCCTGCCTCTCCATCCATCCAGTACAGCATCCTGCG...ACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR TCA 90 bp | AGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGCGACGCTCACAACGCTaGACTGGGTCAGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLKTPVSKFASKIMVPGKRRSQR*TGSGRR Trigger: TCTTCTCCCTGACCCAGTTCAGCGTTGTGAGCGTCG...CTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCGACGCTCACAACGCTaGACTGGGTCAGGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGRASKHLSQSLPLRLWYRRSQR*TGSGRR Trigger: TCTTCTCCCTGACCCAGTTCAGCGTTGTGAGCGTCG...GTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR TCA 90 bp | GAGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGCTCCAGGTAGGCCTTaGAAGGGTGACCCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EYRKSLKTPVSKFASKIMAPGRP*KGDPHL Trigger: CAGATGAGGGTCACCCTTTCAAGGCCTACCTGGAGC...CATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR TCA 90 bp | AGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGGCTCCAGGTAGGCCTTaGAAGGGTGACCCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: STGRASKHLSQSLPLRLWAPGRP*KGDPHL Trigger: CAGATGAGGGTCACCCTTTCAAGGCCTACCTGGAGC...CCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | GGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACGTGTACTTCTGGATCTaGTCCTGGGACAGGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GNNQFAVTRKERAVTTPDVYFWI*SWDRVI Trigger: GATCACCCTGTCCCAGGAGCAGATCCAGAAGTACAC...GTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCGTGTACTTCTGGATCTaGTCCTGGGACAGGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NNQFAVTRKERAVTTPDTVYFWI*SWDRVI Trigger: GATCACCCTGTCCCAGGAGCAGATCCAGAAGTACAC...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACACACAGTCCATCTTaGTGGAATCGGCAGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNNQFAVTRKERAVTTPDTHSPS*WNRQWP Trigger: AGGCCACTGCCGATTCCACCAAGATGGACTGTGTGT...GTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATGAATCCATCCAGCAACCCAAGGACATGATAAGCGATCCACTATGTGTCCAGTCTGTGTACTTCTaGATCTGCTCCTGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDESIQQPKDMISDPLCVQSVYF*ICSWDR Trigger: CCTGTCCCAGGAGCAGATCCAGAAGTACACAGACTG...GACACATAGTGGATCGCTTATCATGTCCTTGGGTTGCTGGATGGATTCATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTGAATCCACCAGGTCCTaGACCAGGAAAAGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GKGNNQFAVTRKERAVTTESTRS*TRKSLR Trigger: ACGGAGGCTTTTCCTGGTCCAGGACCTGGTGGATTC...AGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGAATCCACCAGGTCCTaGACCAGGAAAAGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: MVPGKGNNQFAVTRKERAESTRS*TRKSLR Trigger: ACGGAGGCTTTTCCTGGTCCAGGACCTGGTGGATTC...AGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCAACACAATCCCAGTCTaGTTGATGTCCCGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NNQFAVTRKERAVTTPDTNTIPV*LMSRQY Trigger: GTACTGGCGGGACATCAAGCAGACTGGGATTGTGTT...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTTTCCCCTGGGACTCTaGAGCAGATGGTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YGTRKGKQSICSNEEGESFPLGL*SRWFCS Trigger: GGAACAGAACCATCTGCTGCAGAGTCCCAGGGGAAA...GCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGCTCACAACGCTGAACTaGGTCAGGGAGAAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLKTPVSKFASKIMVPGKLTTLN*VREKSS Trigger: GCTGCTCTTCTCCCTGACCCAGTTCAGCGTTGTGAG...CTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCGTGGGACTTTGACTaGAACTCACAGCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NNQFAVTRKERAVTTPDTPWDFD*NSQLPL Trigger: AAGAGGAAGCTGTGAGTTCCAGTCAAAGTCCCACGG...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | TATAGTGTTATTAGAGATGAATCCATCCAGCAACCCAAGGACATGATAAGCGATTCTAGCCCAGGGTGTTaGTCCTCCTGGCCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YSVIRDESIQQPKDMISDSSPGC*SSWPFA Trigger: GGCAAAAGGCCAGGAGGAGCAACACCCTGGGCTAGA...ATCGCTTATCATGTCCTTGGGTTGCTGGATGGATTCATCTCTAATAACACTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | CAGTATCAAGTACATAAGTGCAAATATCCAGAGTCTGTGATTGAGTCCATTAGGTCCTCTTCAGGCTTCTaGTGCTGTGATCTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QYQVHKCKYPESVIESIRSSSGF*CCDLGG Trigger: GCCGCCCAGATCACAGCAGCAGAAGCCTGAAGAGGA...CCTAATGGACTCAATCACAGACTCTGGATATTTGCACTTATGTACTTGATACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | ACCTTTAGTTACCATACATGTAAATCAGCCCAGGCATCCCATAGGAGAAAAGTACTCACAACGCTGAACTaGGTCAGGGAGAAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFSYHTCKSAQASHRRKVLTTLN*VREKSS Trigger: GCTGCTCTTCTCCCTGACCCAGTTCAGCGTTGTGAG...TACTTTTCTCCTATGGGATGCCTGGGCTGATTTACATGTATGGTAACTAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGCAGTCTGTGTACTTCTaGATCTGCTCCTGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKTPVSKFASKIMVPGKQSVYF*ICSWDR Trigger: CCTGTCCCAGGAGCAGATCCAGAAGTACACAGACTG...CTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | AGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGCAGCTGCCATACCTGTaGATGCAGTTTCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: STGRASKHLSQSLPLRLWQLPYL*MQFPWR Trigger: TCGCCATGGAAACTGCATCCACAGGTATGGCAGCTG...CCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCTCTTGTTCACCTCAGTaGACTCAGCAGGAGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NNQFAVTRKERAVTTPDTSCSPQ*TQQESS Trigger: AGATGACTCCTGCTGAGTCCACTGAGGTGAACAAGA...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | GTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTTTCTGTTCCAGAAGATaGAGGCGTGACAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGKGNNQFAVTRKERAVFCSRR*RRDRSW Trigger: CCAGGATCTGTCACGCCTCCATCTTCTGGAACAGAA...AACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTGAATTTCGGTGGCCGTaGGACTTTGACTGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKGNNQFAVTRKERAVTTEFRWP*DFDWNS Trigger: TGAGTTCCAGTCAAAGTCCCACGGCCACCGAAATTC...AGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR TCA 90 bp | GAGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGACGACGGTGTTTATGTaGGTCCTCACAAGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EYRKSLKTPVSKFASKIMTTVFM*VLTSPR Trigger: TCTGGGACTTGTGAGGACTCACATAAACACCGTCGT...CATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | GTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTCCTGACTTTTCCAGTTaGTCCACACACAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VPGKGNNQFAVTRKERAVPDFSS*STHSPS Trigger: AGATGGACTGTGTGTGGAGCAACTGGAAAAGTCAGG...AACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGGGAAACACAATCCCAGTCTaGTTGATGTCCCGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTPVSKFASKIMVPGKGNTIPV*LMSRQY Trigger: GTACTGGCGGGACATCAAGCAGACTGGGATTGTGTT...TCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGCTCGAACCCCTTCTaGTTTTGTGGAGACTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YGTRKGKQSICSNEEGESCSNPF*FCGDFS Trigger: ACTGAAGTCTCCACAAAAGCAGAAGGGGTTCGAGCA...GCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR TCA 90 bp | TCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGGGAAACGACGGTGTTTATGTaGGTCCTCACAAGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKHLSQSLPLRLWYQERETTVFM*VLTSPR Trigger: TCTGGGACTTGTGAGGACTCACATAAACACCGTCGT...TTCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | GAGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGACAAGTCCCAGATATTaGTCAACTTGTGCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EYRKSLKTPVSKFASKIMTSPRY*STCAWC Trigger: GCACCAGGCACAAGTTGACCAATATCTGGGACTTGT...CATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | AGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGACAAGTCCCAGATATTaGTCAACTTGTGCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: STGRASKHLSQSLPLRLWTSPRY*STCAWC Trigger: GCACCAGGCACAAGTTGACCAATATCTGGGACTTGT...CCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGGGAACAAGTCCCAGATATTaGTCAACTTGTGCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKTPVSKFASKIMVPGKGTSPRY*STCAWC Trigger: GCACCAGGCACAAGTTGACCAATATCTGGGACTTGT...TCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | GGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTTGCCTCCTGTGGCCTaGTTATGTCAATGTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRKGKQSICSNEEGESCLPPVA*LCQCIC Trigger: ACAAATACATTGACATAACCAGGCCACAGGAGGCAA...ACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | AAGAGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTACCCTCATCTGTTTTCTaGACAGCTTGTAGAACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTGRASKHLSQSLPLRLPSSVF*TACRTD Trigger: GTCCGTTCTACAAGCTGTGCAGAAAACAGATGAGGG...TAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCATATTGGTCAACTTGTaGCTGGTGCTTAACGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: YGTRKGKQSICSNEEGESILVNL*LVLNVH Trigger: GTGTACGTTAAGCACCAGGCACAAGTTGACCAATAT...GCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| 3UTR CAA 72 bp | AGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTaGCCTCTAAGATTATGGTACCAGGAAAGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: STGRASKHLSQS*PLRLWYQERET Trigger: TGTTTCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR GCA 90 bp | CAGTATCAAGTACATAAGTGCAAATATCCAGAGTCTGTGATTGAGTCCATTAGGCCCTCATCTGTTTTCTaGACAGCTTGTAGAACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QYQVHKCKYPESVIESIRPSSVF*TACRTD Trigger: GTCCGTTCTACAAGCTGTGCAGAAAACAGATGAGGG...CCTAATGGACTCAATCACAGACTCTGGATATTTGCACTTATGTACTTGATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | TATAGTGTTATTAGAGATGAATCCATCCAGCAACCCAAGGACATGATAAGCGATAATTCCAGTAAAGTATaGAGAGTCCTCCCGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSVIRDESIQQPKDMISDNSSKV*RVLPRW Trigger: CCACCTCGGGAGGACTCTGCATACTTTACTGGAATT...ATCGCTTATCATGTCCTTGGGTTGCTGGATGGATTCATCTCTAATAACACTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAGTTACCATACATGTAAATCAGCCCAGGCATCCCATAGGAGAAAAGTAATATTGGTCAACTTGTaGCTGGTGCTTAACGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: TFSYHTCKSAQASHRRKVILVNL*LVLNVH Trigger: GTGTACGTTAAGCACCAGGCACAAGTTGACCAATAT...TACTTTTCTCCTATGGGATGCCTGGGCTGATTTACATGTATGGTAACTAAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | TCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGGGAAATATTGGTCAACTTGTaGCTGGTGCTTAACGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKHLSQSLPLRLWYQEREILVNL*LVLNVH Trigger: GTGTACGTTAAGCACCAGGCACAAGTTGACCAATAT...TTCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGGGAAGATTCTTCGAATAAGTaGTCCTTGATGAGTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKHLSQSLPLRLWYQEREDSSNK*SLMSFP Trigger: GGGGAAACTCATCAAGGACCACTTATTCGAAGAATC...TTCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR GCA 90 bp | CAGTATCAAGTACATAAGTGCAAATATCCAGAGTCTGTGATTGAGTCCATTAGGAGGTCAATAGCTTTTTaGTTGTTGAAGAAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QYQVHKCKYPESVIESIRRSIAF*LLKKGR Trigger: TCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCT...CCTAATGGACTCAATCACAGACTCTGGATATTTGCACTTATGTACTTGATACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | AGCTTGCACTCCGCGTCGCTGCCCGGCTGCGGCGGCGGTGGGCTCTaGTGGCCTCGCGGCTGCAGACTGAAGCGGCCCCGGGCGCGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLHSASLPGCGGGGL*WPRGCRLKRPRARA Trigger: CGCGCGCGCCCGGGGCCGCTTCAGTCTGCAGCCGCGAGGCCACCAGAGCCCACCGCCGCCGCAGCCGGGCAGCGACGCGGAGTGCAAGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS TCA 90 bp | CATGGTGCGGGCTTGGCGGGCTCGCCGTGGCTCTCCTCCAGGCGCTaGGCTTGCACTCCGCGTCGCTGCCCGGCTGCGGCGGCGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGAGLAGSPWLSSRR*ACTPRRCPAAAAVG Trigger: GCCCACCGCCGCCGCAGCCGGGCAGCGACGCGGAGTGCAAGCTCAGCGCCTGGAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCACCATG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CCA 90 bp | GGTCGGGCTCCACAGGGCCTTGGTGGCTGGGCGCTCGTTCTTCGGTaGCCCGAGAGCCTGTCTCCTCGCGGATGGCGTCCAGGGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRAPQGLGGWALVLR*PESLSPRGWRPGHP Trigger: CGGGTGCCCTGGACGCCATCCGCGAGGAGACAGGCTCTCGGGCCACCGAAGAACGAGCGCCCAGCCACCAAGGCCCTGTGGAGCCCGACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS TCA 90 bp | ACGATGGCTCTGGGCGGGATTGGAGGGCGGCAGCGGGGGCAAAGCTaGGCATCGGGTCGGGCTCCACAGGGCCTTGGTGGCTGGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TMALGGIGGRQRGQS*ASGRAPQGLGGWAL Trigger: GAGCGCCCAGCCACCAAGGCCCTGTGGAGCCCGACCCGATGCTCAGCTTTGCCCCCGCTGCCGCCCTCCAATCCCGCCCAGAGCCATCGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | TGGGCGCTCGTTCTTCGGTGGCCCGAGAGCCTGTCTCCTCGCGGATaGCGTCCAGGGCACCCGGTTTCATCGGGGGCGAGTCCTGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: WALVLRWPESLSPRG*RPGHPVSSGASPAR Trigger: GCGAGCAGGACTCGCCCCCGATGAAACCGGGTGCCCTGGACGCCATCCGCGAGGAGACAGGCTCTCGGGCCACCGAAGAACGAGCGCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | TCTGGGCGGCTCCGGGACCGAGGCTCCATCTCCAGACGATGGCTCTaGGCGGGATTGGAGGGCGGCAGCGGGGGCAAAGCTGAGCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRLRDRGSISRRWL*AGLEGGSGGKAEHR Trigger: CCGATGCTCAGCTTTGCCCCCGCTGCCGCCCTCCAATCCCGCCCAGAGCCATCGTCTGGAGATGGAGCCTCGGTCCCGGAGCCGCCCAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 90 bp | TCGCGGATGGCGTCCAGGGCACCCGGTTTCATCGGGGGCGAGTCCTaGTCGCGCTTGGGGCTCTCCTCCGAGGCTGAGGAGGCATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRMASRAPGFIGGES*SRLGLSSEAEEASQ Trigger: CTGTGATGCCTCCTCAGCCTCGGAGGAGAGCCCCAAGCGCGAGCAGGACTCGCCCCCGATGAAACCGGGTGCCCTGGACGCCATCCGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | CGAGGGCATCGGGAACAGCTGCCATACCTGTGGATGCAGTTTCCATaGCGACGGGAGGCGACCGGGCGGGGCCGGAGCACAGTTCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RGHREQLPYLWMQFP*RREATGRGRSTVPA Trigger: CGCGGGAACTGTGCTCCGGCCCCGCCCGGTCGCCTCCCGTCGCCATGGAAACTGCATCCACAGGTATGGCAGCTGTTCCCGATGCCCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 90 bp | GGGAGAGTGGTCGAGGGCATCGGGAACAGCTGCCATACCTGTGGATaGAGTTTCCATGGCGACGGGAGGCGACCGGGCGGGGCCGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRVVEGIGNSCHTCG*SFHGDGRRPGGAGA Trigger: TGCTCCGGCCCCGCCCGGTCGCCTCCCGTCGCCATGGAAACTGCATCCACAGGTATGGCAGCTGTTCCCGATGCCCTCGACCACTCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 90 bp | TCCACACACAGTCCATCTTGGTGGAATCGGCAGTGGCCTGCATGGTaGGGGCTTGGCGGGCTCGCCGTGGCTCTCCTCCAGGCGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: STHSPSWWNRQWPAW*GLGGLAVALLQALS Trigger: GCTCAGCGCCTGGAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACTGTGTGTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CCA 90 bp | AAGAGGGAGAGTGGTCGAGGGCATCGGGAACAGCTGCCATACCTGTaGATGCAGTTTCCATGGCGACGGGAGGCGACCGGGCGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KRESGRGHREQLPYL*MQFPWRREATGRGR Trigger: CCGGCCCCGCCCGGTCGCCTCCCGTCGCCATGGAAACTGCATCCACAGGTATGGCAGCTGTTCCCGATGCCCTCGACCACTCTCCCTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | CAGTCCATCTTGGTGGAATCGGCAGTGGCCTGCATGGTGCGGGCTTaGCGGGCTCGCCGTGGCTCTCCTCCAGGCGCTGAGCTTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: QSILVESAVACMVRA*RARRGSPPGAELAL Trigger: GAGTGCAAGCTCAGCGCCTGGAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS TCA 90 bp | CATCGGGGGCGAGTCCTGCTCGCGCTTGGGGCTCTCCTCCGAGGCTaGGGAGGCATCACAGGACTCGATGATGAGCTCGCTGTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRGRVLLALGALLRG*GGITGLDDELAVQL Trigger: GAGCTGGACAGCGAGCTCATCATCGAGTCCTGTGATGCCTCCTCAGCCTCGGAGGAGAGCCCCAAGCGCGAGCAGGACTCGCCCCCGATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 90 bp | CAGTTGCTCCACACACAGTCCATCTTGGTGGAATCGGCAGTGGCCTaGATGGTGCGGGCTTGGCGGGCTCGCCGTGGCTCTCCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLHTQSILVESAVA*MVRAWRARRGSPPG Trigger: GCCTGGAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACTGTGTGTGGAGCAACTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CCA 90 bp | CTGAGTCTCCGGACTCGGCACTGCTGGCCTCCTGGTCGAGGGGACTaGGGATGGTGGGCAGCCCAGACCTGGTCTTGGTTTTGGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLRTRHCWPPGRGD*GWWAAQTWSWFWVC Trigger: ACAAACCCAAAACCAAGACCAGGTCTGGGCTGCCCACCATCCCCAGTCCCCTCGACCAGGAGGCCAGCAGTGCCGAGTCCGGAGACTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTGGGCTCCACAGGGCCTaGGTGGCTGGGCGCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EEGESCYHSRHPHSCPASGLHRA*VAGRSF Trigger: GAACGAGCGCCCAGCCACCAAGGCCCTGTGGAGCCC...AGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | TTTTCCAGTTGCTCCACACACAGTCCATCTTGGTGGAATCGGCAGTaGCCTGCATGGTGCGGGCTTGGCGGGCTCGCCGTGGCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSSCSTHSPSWWNRQ*PAWCGLGGLAVALL Trigger: GAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACTGTGTGTGGAGCAACTGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CCA 90 bp | GACTGGAACTCACAGCTTCCTCTTCAGGCTTCTGCTGCTGTGATCTaGGCGGCTCCGGGACCGAGGCTCCATCTCCAGACGATGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DWNSQLPLQASAAVI*AAPGPRLHLQTMAL Trigger: CAGAGCCATCGTCTGGAGATGGAGCCTCGGTCCCGGAGCCGCCCAGATCACAGCAGCAGAAGCCTGAAGAGGAAGCTGTGAGTTCCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | GAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCTCTCACCATCATGCACTTACTCAGCGTGCCTCTaGGCGCCGGGGATTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRTSREEGERGLSPSCTYSACL*APGILA Trigger: GGCTAAAATCCCCGGCGCCAAGAGGCACGCTGAGTA...AGTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | GACCGAAGCTCACATAGCCAGAGGGCAGGGCATCCTCAGAGGCCATaGGGTCCTCTGACACCAGCTCAATTTCTGAGTCTCCGGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: DRSSHSQRAGHPQRP*GPLTPAQFLSLRTR Trigger: CCGAGTCCGGAGACTCAGAAATTGAGCTGGTGTCAGAGGACCCCATGGCCTCTGAGGATGCCCTGCCCTCTGGCTATGTGAGCTTCGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS TCA 90 bp | ACTTTGACTGGAACTCACAGCTTCCTCTTCAGGCTTCTGCTGCTGTaGTCTGGGCGGCTCCGGGACCGAGGCTCCATCTCCAGACGATGG | + |
|
Preference number: 5 (lower is better) Translates to: TLTGTHSFLFRLLLL*SGRLRDRGSISRRW Trigger: CCATCGTCTGGAGATGGAGCCTCGGTCCCGGAGCCGCCCAGATCACAGCAGCAGAAGCCTGAAGAGGAAGCTGTGAGTTCCAGTCAAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | AAGCTACAGAAGCGTTGCAGAGGGGAGGACATCGAGGGAGGAGGGAGAACGTGGGTCTTGGTTTTGGGTTaGTCGGCCACCTGGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KLQKRCRGEDIEGGGRTWVLVLG*SATWPT Trigger: AGTGGGCCAGGTGGCCGACAAACCCAAAACCAAGAC...CCACGTTCTCCCTCCTCCCTCGATGTCCTCCCCTCTGCAACGCTTCTGTAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | ACCACATCTAACACACTCTATACTTTAGTGCTTGACACGGGGGTGGGGAGGGGGCCTGGCCCACTGGCCTaGGACTCTCGGTGGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TTSNTLYTLVLDTGVGRGPGPLA*DSRWFH Trigger: ATGAAACCACCGAGAGTCCAAGGCCAGTGGGCCAGG...CCCCCTCCCCACCCCCGTGTCAAGCACTAAAGTATAGAGTGTGTTAGATGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | AGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTGGCTCTGGGCGGGATaGGAGGGCGGCAGCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: STGRASKHLSQSLPLRLWWLWAG*EGGSGG Trigger: GCCCCCGCTGCCGCCCTCCAATCCCGCCCAGAGCCA...CCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | TATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCCTGCATGGTGCGGGCTaGGCGGGCTCGCCGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YGTRKGKQSICSNEEGESLHGAG*AGSPWL Trigger: GAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAG...GCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTACAATCCCAGTCTGCTaGATGTCCCGCCAGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: EEGESCYHSRHPHSCPASTIPVC*MSRQYR Trigger: TCTGTACTGGCGGGACATCAAGCAGACTGGGATTGT...AGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAGAGAGCTGTTACCACTCCAGACACCCCCACTCATGTCCGGCTTCTCGCACTGTGTCAGGACTaGGCTTCAGACACAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RKERAVTTPDTPTHVRLLALCQD*ASDTGL Trigger: AAGACCTGTGTCTGAAGCCAAGTCCTGACACAGTGC...GAGAAGCCGGACATGAGTGGGGGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCGAGTCCTGCTCGCGCTaGGGGCTCTCCTCCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NNQFAVTRKERAVTTPDTESCSR*GLSSEA Trigger: AGCCTCGGAGGAGAGCCCCAAGCGCGAGCAGGACTC...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS TCA 90 bp | AGAAGATGGAGGCGTGACAGATCCTGGGCTGTCATCTTCAGGCTCTaGGACAGTGACAGTGGGCACTGTGTCAGGACTTGGCTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: RRWRRDRSWAVIFRL*DSDSGHCVRTWLQT Trigger: TGTCTGAAGCCAAGTCCTGACACAGTGCCCACTGTCACTGTCTCAGAGCCTGAAGATGACAGCCCAGGATCTGTCACGCCTCCATCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS TCA 90 bp | AGGCCAGAACCAAGTGGTCCAGGAATTTCGGTGGCCGTGGGACTTTaGCTGGAACTCACAGCTTCCTCTTCAGGCTTCTGCTGCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPEPSGPGISVAVGL*LELTASSSGFCCCD Trigger: ATCACAGCAGCAGAAGCCTGAAGAGGAAGCTGTGAGTTCCAGTCAAAGTCCCACGGCCACCGAAATTCCTGGACCACTTGGTTCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | TTAATGGCAGCAATCAACTCATCCTCGGAGACGCTGCCTTTCCCCTaGGACTCTGCAGCAGATGGTTCTGTTCCAGAAGATGGAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LMAAINSSSETLPFP*DSAADGSVPEDGGV Trigger: CACGCCTCCATCTTCTGGAACAGAACCATCTGCTGCAGAGTCCCAGGGGAAAGGCAGCGTCTCCGAGGATGAGTTGATTGCTGCCATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | CAGAACCAAGTGGTCCAGGAATTTCGGTGGCCGTGGGACTTTGACTaGAACTCACAGCTTCCTCTTCAGGCTTCTGCTGCTGTGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QNQVVQEFRWPWDFD*NSQLPLQASAAVIW Trigger: CCAGATCACAGCAGCAGAAGCCTGAAGAGGAAGCTGTGAGTTCCAGTCAAAGTCCCACGGCCACCGAAATTCCTGGACCACTTGGTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | GGGAGGACATCGAGGGAGGAGGGAGAACGTGGGCTCTCACCATCATGCACTTTTCCCCATCTTTTAGTGTaGAAGAGGGAGAGTGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GRTSREEGERGLSPSCTFPHLLV*KRESGR Trigger: TCGACCACTCTCCCTCTTCAACACTAAAAGATGGGG...AAAAGTGCATGATGGTGAGAGCCCACGTTCTCCCTCCTCCCTCGATGTCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS TCA 90 bp | GCGCCGGGGATTTTAGCCTGGATCTTTGCCACGACGGTGTTTATGTaGGTCCTCACAAGTCCCAGATATTGGTCAACTTGTGCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: APGILAWIFATTVFM*VLTSPRYWSTCAWC Trigger: GCACCAGGCACAAGTTGACCAATATCTGGGACTTGTGAGGACTCACATAAACACCGTCGTGGCAAAGATCCAGGCTAAAATCCCCGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS GCA 90 bp | GTGACAGTGGGCACTGTGTCAGGACTTGGCTTCAGACACAGGTCTTaGTTCTCGGGGATTGTCTCTTGTGTGGCAGTCATAAGAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTVGTVSGLGFRHRS*FSGIVSCVAVIRGG Trigger: ACCTCCTCTTATGACTGCCACACAAGAGACAATCCCCGAGAAGCAAGACCTGTGTCTGAAGCCAAGTCCTGACACAGTGCCCACTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | ACCACATCTAACACACTCTATACTTTAGTGCTTGACACGGGGGTGGGGAGGGGGACAATCCCAGTCTGCTaGATGTCCCGCCAGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTSNTLYTLVLDTGVGRGTIPVC*MSRQYR Trigger: TCTGTACTGGCGGGACATCAAGCAGACTGGGATTGT...CCCCCTCCCCACCCCCGTGTCAAGCACTAAAGTATAGAGTGTGTTAGATGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS GCA 90 bp | AGGGAGAAGAGCAGCAGCAGGAAGCTCCCGAACACAATCCCAGTCTaGTTGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: REKSSSRKLPNTIPV*LMSRQYRRSIAFCL Trigger: CAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAAGCAGACTGGGATTGTGTTCGGGAGCTTCCTGCTGCTGCTCTTCTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | CTAGCCCAGGGTGTTGCTCCTCCTGGCCTTTTGCCTCCTGTGGCCTaGTTATGTCAATGTATTTGTAGGCTTCTGCCTTCATCTGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LAQGVAPPGLLPPVA*LCQCICRLLPSSGL Trigger: TAGACCAGATGAAGGCAGAAGCCTACAAATACATTGACATAACCAGGCCACAGGAGGCAAAAGGCCAGGAGGAGCAACACCCTGGGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | TGTCAGCGCACTTGGCAAGAAAGGCCTAGCCACAGGGACAGTAGAAGCTACAGACACAAGTCCCAGATATaGGTCAACTTGTGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CQRTWQERPSHRDSRSYRHKSQI*VNLCLV Trigger: CACCAGGCACAAGTTGACCAATATCTGGGACTTGTG...TCTGTAGCTTCTACTGTCCCTGTGGCTAGGCCTTTCTTGCCAAGTGCGCTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
||
| CDS GCA 90 bp | CCAGTCTGCTTGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTTaGTTGTTGAAGAAAGGCAGAGGGGGCATGAGGCCAGAACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVCLMSRQYRRSIAF*LLKKGRGGMRPEPS Trigger: ACTTGGTTCTGGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAAGCAGACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | AGGAGCCACATGAGGACTGCAAATTTTAAGGAATCCACCAGGTCCTaGACCAGGAAAAGCCTCCGTAGCTCCTTCAGAGTGCTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RSHMRTANFKESTRS*TRKSLRSSFRVLFT Trigger: TGTGAACAGCACTCTGAAGGAGCTACGGAGGCTTTTCCTGGTCCAGGACCTGGTGGATTCCTTAAAATTTGCAGTCCTCATGTGGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | GTCAACATGCTGGCACCTTTAGTTACCATACATGTAAATCAGCCCAGGCATCCCACAATCCCAGTCTGCTaGATGTCCCGCCAGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VNMLAPLVTIHVNQPRHPTIPVC*MSRQYR Trigger: TCTGTACTGGCGGGACATCAAGCAGACTGGGATTGT...GGGATGCCTGGGCTGATTTACATGTATGGTAACTAAAGGTGCCAGCATGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGTACTCAGCGTGCCTCTaGGCGCCGGGGATTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLKTPVSKFASKIMVPGKYSACL*APGILA Trigger: GGCTAAAATCCCCGGCGCCAAGAGGCACGCTGAGTA...CTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | AGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACTCAGCGTGCCTCTaGGCGCCGGGGATTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: STGRASKHLSQSLPLRLWYSACL*APGILA Trigger: GGCTAAAATCCCCGGCGCCAAGAGGCACGCTGAGTA...CCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | GGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTCCGTCAGTGTGATCTaGACAGGGGCAGTGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTRKGKQSICSNEEGESCSVSVI*TGAVTR Trigger: TCTGGTCACTGCCCCTGTCAAGATCACACTGACGGA...ACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 90 bp | TCCTTGTCTTTAAAGTCCAAGTCTTTATCTTCTAGCCCAGGGTGTTaGTCCTCCTGGCCTTTTGCCTCCTGTGGCCTGGTTATGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLKSKSLSSSPGC*SSWPFASCGLVMSM Trigger: CATTGACATAACCAGGCCACAGGAGGCAAAAGGCCAGGAGGAGCAACACCCTGGGCTAGAAGATAAAGACTTGGACTTTAAAGACAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 90 bp | TTCCTTCTGAAGAATTCCAGTAAAGTATGCAGAGTCCTCCCGAGGTaGATAGCAGACGTCAGAAATCAGGGATGTGTAACATGCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLLKNSSKVCRVLPR*IADVRNQGCVTCPF Trigger: GAAGGGGCATGTTACACATCCCTGATTTCTGACGTCTGCTATCCACCTCGGGAGGACTCTGCATACTTTACTGGAATTCTTCAGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | TCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGGGAACACACACAGTCCATCTaGGTGGAATCGGCAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKHLSQSLPLRLWYQEREHTQSI*VESAVA Trigger: GGCCACTGCCGATTCCACCAAGATGGACTGTGTGTG...TTCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | GGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACCACAAGTCCCAGATATaGGTCAACTTGTGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GNNQFAVTRKERAVTTPDHKSQI*VNLCLV Trigger: CACCAGGCACAAGTTGACCAATATCTGGGACTTGTG...GTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | GTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTGGGTCAGCTAGGATCTaGTTCACCTCAGTGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPGKGNNQFAVTRKERAVGSARI*FTSVDS Trigger: TGAGTCCACTGAGGTGAACAAGATCCTAGCTGACCC...AACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | ATGGTACCAGGAAAGGGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTCTTCAGACACAGGTCTaGCTTCTCGGGGATTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MVPGKGNNQFAVTRKERALQTQV*LLGDCL Trigger: GAGACAATCCCCGAGAAGCAAGACCTGTGTCTGAAG...AGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCCCTTTCCTGGTACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | TATAGTGTTATTAGAGATGAATCCATCCAGCAACCCAAGGACATGATAAGCGATCACACACAGTCCATCTaGGTGGAATCGGCAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSVIRDESIQQPKDMISDHTQSI*VESAVA Trigger: GGCCACTGCCGATTCCACCAAGATGGACTGTGTGTG...ATCGCTTATCATGTCCTTGGGTTGCTGGATGGATTCATCTCTAATAACACTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021497.16 |
||
| CDS-3UTR CAA 90 bp | TATAGTGTTATTAGAGATGAATCCATCCAGCAACCCAAGGACATGATAAGCGATAGCCCAGACCTGGTCTaGGTTTTGGGTTTGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSVIRDESIQQPKDMISDSPDLV*VLGLSA Trigger: GGCCGACAAACCCAAAACCAAGACCAGGTCTGGGCT...ATCGCTTATCATGTCCTTGGGTTGCTGGATGGATTCATCTCTAATAACACTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCACAAGTCCCAGATATaGGTCAACTTGTGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGRASKHLSQSLPLRLWYHKSQI*VNLCLV Trigger: CACCAGGCACAAGTTGACCAATATCTGGGACTTGTG...GTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGTACAGGAAGAGCCTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTACTCGGGGATTGTCTCTaGTGTGGCAGTCATAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSTGRASKHLSQSLPLRLLGDCL*CGSHKR Trigger: CCTCTTATGACTGCCACACAAGAGACAATCCCCGAG...TAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAGGCTCTTCCTGTACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | GGAAACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACGAGACTTCAGTGTCCTaGTCTTTAAAGTCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GNNQFAVTRKERAVTTPDETSVS*SLKSKS Trigger: AGACTTGGACTTTAAAGACAAGGACACTGAAGTCTC...GTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | AACAATCAATTTGCAGTAACGAGGAAGGAGAGAGCTGTTACCACTCCAGACACCTCAATAGCTTTTTGCTaGTTGAAGAAAGGCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NNQFAVTRKERAVTTPDTSIAFC*LKKGRG Trigger: CCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGA...GGTGTCTGGAGTGGTAACAGCTCTCTCCTTCCTCGTTACTGCAAATTGATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | TATAGTGTTATTAGAGATGAATCCATCCAGCAACCCAAGGACATGATAAGCGATATAGCTTTTTGCTTGTaGAAGAAAGGCAGAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YSVIRDESIQQPKDMISDIAFCL*KKGRGG Trigger: GCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTAT...ATCGCTTATCATGTCCTTGGGTTGCTGGATGGATTCATCTCTAATAACACTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACACCTGTCTCAAAGTTTGCCTCTAAGATTATGGTACCAGGAAAGGGAAAGGTCAATAGCTTTTaGCTTGTTGAAGAAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKTPVSKFASKIMVPGKGKVNSF*LVEERQ Trigger: CTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTT...TCCCTTTCCTGGTACCATAATCTTAGAGGCAAACTTTGAGACAGGTGTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 72 bp | TCCGCGTCGCTGCCCGGCTGCGGCGGCGGTGGGCTCTaGTGGCCTCGCGGCTGCAGACTGAAGCGGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SASLPGCGGGGL*WPRGCRLKRPR Trigger: CCGGGGCCGCTTCAGTCTGCAGCCGCGAGGCCACCAGAGCCCACCGCCGCCGCAGCCGGGCAGCGACGCGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS GCA 72 bp | CAGGCGCTGAGCTTGCACTCCGCGTCGCTGCCCGGCTaGGGCGGCGGTGGGCTCTGGTGGCCTCGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QALSLHSASLPG*GGGGLWWPRGC Trigger: GCAGCCGCGAGGCCACCAGAGCCCACCGCCGCCGCAGCCGGGCAGCGACGCGGAGTGCAAGCTCAGCGCCTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CAA 72 bp | GGCGGGCTCGCCGTGGCTCTCCTCCAGGCGCTGAGCTaGCACTCCGCGTCGCTGCCCGGCTGCGGCGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGLAVALLQALS*HSASLPGCGGG Trigger: ACCGCCGCCGCAGCCGGGCAGCGACGCGGAGTGCAAGCTCAGCGCCTGGAGGAGAGCCACGGCGAGCCCGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CAA 90 bp | TGCGGGCTTGGCGGGCTCGCCGTGGCTCTCCTCCAGGCGCTGAGCTaGCACTCCGCGTCGCTGCCCGGCTGCGGCGGCGGTGGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CGLGGLAVALLQALS*HSASLPGCGGGGLW Trigger: CCAGAGCCCACCGCCGCCGCAGCCGGGCAGCGACGCGGAGTGCAAGCTCAGCGCCTGGAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS TCA 72 bp | GGCTTGGCGGGCTCGCCGTGGCTCTCCTCCAGGCGCTaGGCTTGCACTCCGCGTCGCTGCCCGGCTGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLAGSPWLSSRR*ACTPRRCPAAA Trigger: CGCCGCAGCCGGGCAGCGACGCGGAGTGCAAGCTCAGCGCCTGGAGGAGAGCCACGGCGAGCCCGCCAAGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CCA 72 bp | GGGCGGCTCCGGGACCGAGGCTCCATCTCCAGACGATaGCTCTGGGCGGGATTGGAGGGCGGCAGCGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRLRDRGSISRR*LWAGLEGGSGG Trigger: GCCCCCGCTGCCGCCCTCCAATCCCGCCCAGAGCCATCGTCTGGAGATGGAGCCTCGGTCCCGGAGCCGCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 72 bp | GCGTCCAGGGCACCCGGTTTCATCGGGGGCGAGTCCTaGTCGCGCTTGGGGCTCTCCTCCGAGGCTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASRAPGFIGGES*SRLGLSSEAEE Trigger: CTCCTCAGCCTCGGAGGAGAGCCCCAAGCGCGAGCAGGACTCGCCCCCGATGAAACCGGGTGCCCTGGACGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 72 bp | CTCCGGGACCGAGGCTCCATCTCCAGACGATGGCTCTaGGCGGGATTGGAGGGCGGCAGCGGGGGCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRDRGSISRRWL*AGLEGGSGGKA Trigger: AGCTTTGCCCCCGCTGCCGCCCTCCAATCCCGCCCAGAGCCATCGTCTGGAGATGGAGCCTCGGTCCCGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 72 bp | TTGGTGGAATCGGCAGTGGCCTGCATGGTGCGGGCTTaGCGGGCTCGCCGTGGCTCTCCTCCAGGCGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVESAVACMVRA*RARRGSPPGAE Trigger: CTCAGCGCCTGGAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CAA 90 bp | GCGTCCAGGGCACCCGGTTTCATCGGGGGCGAGTCCTGCTCGCGCTaGGGGCTCTCCTCCGAGGCTGAGGAGGCATCACAGGACTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: ASRAPGFIGGESCSR*GLSSEAEEASQDSM Trigger: CATCGAGTCCTGTGATGCCTCCTCAGCCTCGGAGGAGAGCCCCAAGCGCGAGCAGGACTCGCCCCCGATGAAACCGGGTGCCCTGGACGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 72 bp | CGGGAACAGCTGCCATACCTGTGGATGCAGTTTCCATaGCGACGGGAGGCGACCGGGCGGGGCCGGAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: REQLPYLWMQFP*RREATGRGRST Trigger: TGTGCTCCGGCCCCGCCCGGTCGCCTCCCGTCGCCATGGAAACTGCATCCACAGGTATGGCAGCTGTTCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 72 bp | GTTCTTCGGTGGCCCGAGAGCCTGTCTCCTCGCGGATaGCGTCCAGGGCACCCGGTTTCATCGGGGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLRWPESLSPRG*RPGHPVSSGAS Trigger: ACTCGCCCCCGATGAAACCGGGTGCCCTGGACGCCATCCGCGAGGAGACAGGCTCTCGGGCCACCGAAGAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CAA 72 bp | GGCAAAGCTGAGCATCGGGTCGGGCTCCACAGGGCCTaGGTGGCTGGGCGCTCGTTCTTCGGTGGCCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GKAEHRVGLHRA*VAGRSFFGGPR Trigger: TCTCGGGCCACCGAAGAACGAGCGCCCAGCCACCAAGGCCCTGTGGAGCCCGACCCGATGCTCAGCTTTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CAA 72 bp | CGAGGCTCCATCTCCAGACGATGGCTCTGGGCGGGATaGGAGGGCGGCAGCGGGGGCAAAGCTGAGCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: RGSISRRWLWAG*EGGSGGKAEHR Trigger: CCGATGCTCAGCTTTGCCCCCGCTGCCGCCCTCCAATCCCGCCCAGAGCCATCGTCTGGAGATGGAGCCTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 72 bp | GTCGAGGGCATCGGGAACAGCTGCCATACCTGTGGATaGAGTTTCCATGGCGACGGGAGGCGACCGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VEGIGNSCHTCG*SFHGDGRRPGG Trigger: CCCGCCCGGTCGCCTCCCGTCGCCATGGAAACTGCATCCACAGGTATGGCAGCTGTTCCCGATGCCCTCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 72 bp | CGCTGTCCAGCTCGGCCTCACGCTCCTCCCGCAGGATaGTGTACTGGATGGATGGAGAGGCAGGAGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RCPARPHAPPAG*CTGWMERQERG Trigger: CCCCCTCTCCTGCCTCTCCATCCATCCAGTACAGCATCCTGCGGGAGGAGCGTGAGGCCGAGCTGGACAGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS GCA 72 bp | AGTCCATCTTGGTGGAATCGGCAGTGGCCTGCATGGTaGGGGCTTGGCGGGCTCGCCGTGGCTCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPSWWNRQWPAW*GLGGLAVALLQ Trigger: CTGGAGGAGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS GCA 72 bp | CACACACAGTCCATCTTGGTGGAATCGGCAGTGGCCTaGATGGTGCGGGCTTGGCGGGCTCGCCGTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HTQSILVESAVA*MVRAWRARRGS Trigger: AGAGCCACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACTGTGTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS CCA 72 bp | TGCTCCACACACAGTCCATCTTGGTGGAATCGGCAGTaGCCTGCATGGTGCGGGCTTGGCGGGCTCGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CSTHSPSWWNRQ*PAWCGLGGLAV Trigger: CACGGCGAGCCCGCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACTGTGTGTGGAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
||
| CDS TCA 72 bp | CGAGTCCTGCTCGCGCTTGGGGCTCTCCTCCGAGGCTaGGGAGGCATCACAGGACTCGATGATGAGCTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVLLALGALLRG*GGITGLDDELA Trigger: AGCGAGCTCATCATCGAGTCCTGTGATGCCTCCTCAGCCTCGGAGGAGAGCCCCAAGCGCGAGCAGGACTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 72 bp | AGTGGTCGAGGGCATCGGGAACAGCTGCCATACCTGTaGATGCAGTTTCCATGGCGACGGGAGGCGACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGRGHREQLPYL*MQFPWRREATG Trigger: CCCGGTCGCCTCCCGTCGCCATGGAAACTGCATCCACAGGTATGGCAGCTGTTCCCGATGCCCTCGACCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
||
| CDS CCA 72 bp | TGGGGATGGTGGGCAGCCCAGACCTGGTCTTGGTTTTaGGTTTGTCGGCCACCTGGCCCACTGGCCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: WGWWAAQTWSWF*VCRPPGPLALD Trigger: GTCCAAGGCCAGTGGGCCAGGTGGCCGACAAACCCAAAACCAAGACCAGGTCTGGGCTGCCCACCATCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS TCA 72 bp | GGAACTCACAGCTTCCTCTTCAGGCTTCTGCTGCTGTaGTCTGGGCGGCTCCGGGACCGAGGCTCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: GTHSFLFRLLLL*SGRLRDRGSIS Trigger: GGAGATGGAGCCTCGGTCCCGGAGCCGCCCAGATCACAGCAGCAGAAGCCTGAAGAGGAAGCTGTGAGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 72 bp | ATGGTGGGCAGCCCAGACCTGGTCTTGGTTTTGGGTTaGTCGGCCACCTGGCCCACTGGCCTTGGACTCTCG | + |
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Preference number: 6 (lower is better) Translates to: MVGSPDLVLVLG*SATWPTGLGLS Trigger: CGAGAGTCCAAGGCCAGTGGGCCAGGTGGCCGACAAACCCAAAACCAAGACCAGGTCTGGGCTGCCCACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CCA 72 bp | GACTTTTCCAGTTGCTCCACACACAGTCCATCTTGGTaGAATCGGCAGTGGCCTGCATGGTGCGGGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: DFSSCSTHSPSW*NRQWPAWCGLG Trigger: GCCAAGCCCGCACCATGCAGGCCACTGCCGATTCCACCAAGATGGACTGTGTGTGGAGCAACTGGAAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137990.2 |
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| CDS TCA 72 bp | AGGCGTGACAGATCCTGGGCTGTCATCTTCAGGCTCTaGGACAGTGACAGTGGGCACTGTGTCAGGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: RRDRSWAVIFRL*DSDSGHCVRTW Trigger: CCAAGTCCTGACACAGTGCCCACTGTCACTGTCTCAGAGCCTGAAGATGACAGCCCAGGATCTGTCACGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CCA 72 bp | TCACATAGCCAGAGGGCAGGGCATCCTCAGAGGCCATaGGGTCCTCTGACACCAGCTCAATTTCTGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SHSQRAGHPQRP*GPLTPAQFLSL Trigger: GAGACTCAGAAATTGAGCTGGTGTCAGAGGACCCCATGGCCTCTGAGGATGCCCTGCCCTCTGGCTATGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS TCA 72 bp | CAGATCCTGGGCTGTCATCTTCAGGCTCTGAGACAGTaGCAGTGGGCACTGTGTCAGGACTTGGCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: QILGCHLQALRQ*QWALCQDLASD Trigger: GTCTGAAGCCAAGTCCTGACACAGTGCCCACTGTCACTGTCTCAGAGCCTGAAGATGACAGCCCAGGATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS TCA 72 bp | CCAAGTGGTCCAGGAATTTCGGTGGCCGTGGGACTTTaGCTGGAACTCACAGCTTCCTCTTCAGGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSGPGISVAVGL*LELTASSSGFC Trigger: GCAGAAGCCTGAAGAGGAAGCTGTGAGTTCCAGTCAAAGTCCCACGGCCACCGAAATTCCTGGACCACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS GCA 72 bp | AGCAGCAGCAGGAAGCTCCCGAACACAATCCCAGTCTaGTTGATGTCCCGCCAGTACAGAAGGTCAATAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSRKLPNTIPV*LMSRQYRRSIA Trigger: GGCTATTGACCTTCTGTACTGGCGGGACATCAAGCAGACTGGGATTGTGTTCGGGAGCTTCCTGCTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021497.16 ENSMUST00000137990.2 |
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| CDS CCA 72 bp | CTGTTCACATACAGCTGCAGGCAGTCTGTGTACTTCTaGATCTGCTCCTGGGACAGGGTGATCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFTYSCRQSVYF*ICSWDRVISSS Trigger: GGAGCTGGAGATCACCCTGTCCCAGGAGCAGATCCAGAAGTACACAGACTGCCTGCAGCTGTATGTGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS CCA 72 bp | GTGGTCCAGGAATTTCGGTGGCCGTGGGACTTTGACTaGAACTCACAGCTTCCTCTTCAGGCTTCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VVQEFRWPWDFD*NSQLPLQASAA Trigger: AGCAGCAGAAGCCTGAAGAGGAAGCTGTGAGTTCCAGTCAAAGTCCCACGGCCACCGAAATTCCTGGACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 90 bp | TGTGTGGCAGTCATAAGAGGAGGTTCGATCTCCGTCAGTGTGATCTaGACAGGGGCAGTGACCAGAGACACCCTGTGCTGCTCATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CVAVIRGGSISVSVI*TGAVTRDTLCCSSE Trigger: CTCTGATGAGCAGCACAGGGTGTCTCTGGTCACTGCCCCTGTCAAGATCACACTGACGGAGATCGAACCTCCTCTTATGACTGCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS GCA 72 bp | AGCAGCAGCAGGAAGCTCCCGAACACAATCCCAGTCTaGTTGATGTCCCGCCAGTACAGAAGGTCAATAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSRKLPNTIPV*LMSRQYRRSIA Trigger: AGCTATTGACCTTCTGTACTGGCGGGACATCAAGCAGACTGGGATTGTGTTCGGGAGCTTCCTGCTGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 90 bp | AGTGACAGTGGGCACTGTGTCAGGACTTGGCTTCAGACACAGGTCTaGCTTCTCGGGGATTGTCTCTTGTGTGGCAGTCATAAGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SDSGHCVRTWLQTQV*LLGDCLLCGSHKRR Trigger: CCTCCTCTTATGACTGCCACACAAGAGACAATCCCCGAGAAGCAAGACCTGTGTCTGAAGCCAAGTCCTGACACAGTGCCCACTGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS GCA 72 bp | GGCACTGTGTCAGGACTTGGCTTCAGACACAGGTCTTaGTTCTCGGGGATTGTCTCTTGTGTGGCAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: GTVSGLGFRHRS*FSGIVSCVAVI Trigger: TATGACTGCCACACAAGAGACAATCCCCGAGAAGCAAGACCTGTGTCTGAAGCCAAGTCCTGACACAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 72 bp | TCTGCCTTCATCTGGTCTAGGGGGTCAGCTAGGATCTaGTTCACCTCAGTGGACTCAGCAGGAGTCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SAFIWSRGSARI*FTSVDSAGVIS Trigger: AGAGATGACTCCTGCTGAGTCCACTGAGGTGAACAAGATCCTAGCTGACCCCCTAGACCAGATGAAGGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 90 bp | CCCAGTCTGCTTGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTaGCTTGTTGAAGAAAGGCAGAGGGGGCATGAGGCCAGAACCAAG | + |
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Preference number: 6 (lower is better) Translates to: PSLLDVPPVQKVNSF*LVEERQRGHEARTK Trigger: CTTGGTTCTGGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAAGCAGACTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 90 bp | AGGACTTGGCTTCAGACACAGGTCTTGCTTCTCGGGGATTGTCTCTaGTGTGGCAGTCATAAGAGGAGGTTCGATCTCCGTCAGTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: RTWLQTQVLLLGDCL*CGSHKRRFDLRQCD Trigger: ATCACACTGACGGAGATCGAACCTCCTCTTATGACTGCCACACAAGAGACAATCCCCGAGAAGCAAGACCTGTGTCTGAAGCCAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 90 bp | TGCTTGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTTGCTTGTaGAAGAAAGGCAGAGGGGGCATGAGGCCAGAACCAAGTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CLMSRQYRRSIAFCL*KKGRGGMRPEPSGP Trigger: TGGACCACTTGGTTCTGGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 90 bp | GTCTGCTTGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTTGCTaGTTGAAGAAAGGCAGAGGGGGCATGAGGCCAGAACCAAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: VCLMSRQYRRSIAFC*LKKGRGGMRPEPSG Trigger: ACCACTTGGTTCTGGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAAGCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 90 bp | GAGAAGAGCAGCAGCAGGAAGCTCCCGAACACAATCCCAGTCTGCTaGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTTGCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: EKSSSRKLPNTIPVC*MSRQYRRSIAFCLL Trigger: CAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAAGCAGACTGGGATTGTGTTCGGGAGCTTCCTGCTGCTGCTCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS GCA 72 bp | TTAAAGTCCAAGTCTTTATCTTCTAGCCCAGGGTGTTaGTCCTCCTGGCCTTTTGCCTCCTGTGGCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LKSKSLSSSPGC*SSWPFASCGLV Trigger: AACCAGGCCACAGGAGGCAAAAGGCCAGGAGGAGCAACACCCTGGGCTAGAAGATAAAGACTTGGACTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CCA 72 bp | GGTCTAGGGGGTCAGCTAGGATCTTGTTCACCTCAGTaGACTCAGCAGGAGTCATCTCTATTCCAGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: GLGGQLGSCSPQ*TQQESSLFQNQ Trigger: CTGATTCTGGAATAGAGATGACTCCTGCTGAGTCCACTGAGGTGAACAAGATCCTAGCTGACCCCCTAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CCA 72 bp | GGTGTTGCTCCTCCTGGCCTTTTGCCTCCTGTGGCCTaGTTATGTCAATGTATTTGTAGGCTTCTGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GVAPPGLLPPVA*LCQCICRLLPS Trigger: TGAAGGCAGAAGCCTACAAATACATTGACATAACCAGGCCACAGGAGGCAAAAGGCCAGGAGGAGCAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CCA 72 bp | AAGTCTTTATCTTCTAGCCCAGGGTGTTGCTCCTCCTaGCCTTTTGCCTCCTGTGGCCTGGTTATGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: KSLSSSPGCCSS*PFASCGLVMSM Trigger: CATTGACATAACCAGGCCACAGGAGGCAAAAGGCCAGGAGGAGCAACACCCTGGGCTAGAAGATAAAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 72 bp | TCCCGCCAGTACAGAAGGTCAATAGCTTTTTGCTTGTaGAAGAAAGGCAGAGGGGGCATGAGGCCAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: SRQYRRSIAFCL*KKGRGGMRPEP Trigger: TGGTTCTGGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 72 bp | CTTGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTaGCTTGTTGAAGAAAGGCAGAGGGGGCATGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LDVPPVQKVNSF*LVEERQRGHEA Trigger: GGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS GCA 72 bp | CACAGGAGCTGGCTGGTTTGGTGCTCGAACCCCTTCTaGTTTTGTGGAGACTTCAGTGTCCTTGTCTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: HRSWLVWCSNPF*FCGDFSVLVFK Trigger: TTTAAAGACAAGGACACTGAAGTCTCCACAAAAGCAGAAGGGGTTCGAGCACCAAACCAGCCAGCTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS GCA 72 bp | TTGATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTTaGTTGTTGAAGAAAGGCAGAGGGGGCATGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LMSRQYRRSIAF*LLKKGRGGMRP Trigger: TGGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACATCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CCA 72 bp | ATGAGGACTGCAAATTTTAAGGAATCCACCAGGTCCTaGACCAGGAAAAGCCTCCGTAGCTCCTTCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: MRTANFKESTRS*TRKSLRSSFRV Trigger: CACTCTGAAGGAGCTACGGAGGCTTTTCCTGGTCCAGGACCTGGTGGATTCCTTAAAATTTGCAGTCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS CAA 72 bp | ATGTCCCGCCAGTACAGAAGGTCAATAGCTTTTTGCTaGTTGAAGAAAGGCAGAGGGGGCATGAGGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: MSRQYRRSIAFC*LKKGRGGMRPE Trigger: TTCTGGCCTCATGCCCCCTCTGCCTTTCTTCAACAAGCAAAAAGCTATTGACCTTCTGTACTGGCGGGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS CAA 72 bp | GACGGTGTTTATGTGAGTCCTCACAAGTCCCAGATATaGGTCAACTTGTGCCTGGTGCTTAACGTACACAAC | + |
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Preference number: 6 (lower is better) Translates to: DGVYVSPHKSQI*VNLCLVLNVHN Trigger: GTTGTGTACGTTAAGCACCAGGCACAAGTTGACCAATATCTGGGACTTGTGAGGACTCACATAAACACCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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| CDS CCA 72 bp | AAGAATTCCAGTAAAGTATGCAGAGTCCTCCCGAGGTaGATAGCAGACGTCAGAAATCAGGGATGTGTAACA | + |
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Preference number: 6 (lower is better) Translates to: KNSSKVCRVLPR*IADVRNQGCVT Trigger: TGTTACACATCCCTGATTTCTGACGTCTGCTATCCACCTCGGGAGGACTCTGCATACTTTACTGGAATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078505.14 |
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| CDS TCA 72 bp | ATTTTAGCCTGGATCTTTGCCACGACGGTGTTTATGTaGGTCCTCACAAGTCCCAGATATTGGTCAACTTGT | + |
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Preference number: 6 (lower is better) Translates to: ILAWIFATTVFM*VLTSPRYWSTC Trigger: ACAAGTTGACCAATATCTGGGACTTGTGAGGACTCACATAAACACCGTCGTGGCAAAGATCCAGGCTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021497.16 ENSMUST00000078505.14 ENSMUST00000137990.2 |
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