Pregenerated sensors for RTL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055745Ensembl transcript IDs: ENSMUST00000069476.5
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACATGGTGCGGCTGACCTCGCCAAGTCAGGGAGTCCTCGGGCCTaGGAGAAGACCCTCAACCAGGACACTTCCCCTCGATGGGGGCCG | + |
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Preference number: 1 (lower is better) Translates to: KHGAADLAKSGSPRA*EKTLNQDTSPRWGP Trigger: CGGCCCCCATCGAGGGGAAGTGTCCTGGTTGAGGGTCTTCTCCCAGGCCCGAGGACTCCCTGACTTGGCGAGGTCAGCCGCACCATGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | GGGCCACAGGATGGCCTTAGCACTCAGGCTACGCAGCCGAGCATTTaGCACCCAACACCCTGTCCCCAGTGTGTTCCAGCTAAGCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GPQDGLSTQATQPSI*HPTPCPQCVPAKPQ Trigger: CTGGGGCTTAGCTGGAACACACTGGGGACAGGGTGTTGGGTGGCAAATGCTCGGCTGCGTAGCCTGAGTGCTAAGGCCATCCTGTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR TCA 90 bp | ATGCAAATACAGCCAGCACCCATTGGTCCGAGGAGCCAGGGCAGGTaGCCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: MQIQPAPIGPRSQGR*PASPVDGPRQQRGK Trigger: CTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGACCAATGGGTGCTGGCTGTATTTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CCA 90 bp | CACCCATTGGTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTaGATGGGCCTCGACAACAACGTGGAAAGCCACAAAGAAACCTTC | + |
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Preference number: 1 (lower is better) Translates to: HPLVRGARAGDLPPR*MGLDNNVESHKETF Trigger: GAAGGTTTCTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGACCAATGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CCA 90 bp | CCCTGTCCATTAGACGCTGAGTACAGTGAAGCCCCACCTACCGGATaGGTGTCACAGAGTCTGGAGAGCGGGCACAGTACCGCCGCGACT | + |
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Preference number: 1 (lower is better) Translates to: PCPLDAEYSEAPPTG*VSQSLESGHSTAAT Trigger: AGTCGCGGCGGTACTGTGCCCGCTCTCCAGACTCTGTGACACCCATCCGGTAGGTGGGGCTTCACTGTACTCAGCGTCTAATGGACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CCA 90 bp | CATTGGTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTGGATaGGCCTCGACAACAACGTGGAAAGCCACAAAGAAACCTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: HWSEEPGQVTCLPGG*ASTTTWKATKKPSS Trigger: ACTGGAAGGTTTCTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGACCAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CCA 90 bp | TTCACTCCCCTGCAAGCTGAAGCCCAGGGCATGCACATCCAGAAGTaGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCC | + |
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Preference number: 1 (lower is better) Translates to: FTPLQAEAQGMHIQK*LCPLQQQASISGPP Trigger: GGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAGCTTGCAGGGGAGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR TCA 90 bp | TCCTGGTCTGCTGCTGTAGAGAATGGGAAGCCCTGGTCCACATGTTaGTGGCACTGGGTGGGGACGCCTCTCTTTAGCTCCACTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SWSAAVENGKPWSTC*WHWVGTPLFSSTGC Trigger: GCAGCCAGTGGAGCTAAAGAGAGGCGTCCCCACCCAGTGCCATCAACATGTGGACCAGGGCTTCCCATTCTCTACAGCAGCAGACCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | CTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATaGCCTAACACAGAGCATGCGCACCCTGTCATACAGAGCATGCGC | + |
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Preference number: 1 (lower is better) Translates to: LCPLQQQASISGPPR*PNTEHAHPVIQSMR Trigger: GCGCATGCTCTGTATGACAGGGTGCGCATGCTCTGTGTTAGGGCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CCA 90 bp | GGGCAGGTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTaGAAAGCCACAAAGAAACCTTCCAGTTGTCACCTGCCTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: GQVTCLPGGWASTTT*KATKKPSSCHLPPH Trigger: ATGTGGAGGCAGGTGACAACTGGAAGGTTTCTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR TCA 90 bp | AGTCTGGAGAGCGGGCACAGTACCGCCGCGACTGTCAATGTGGAGTaGCACAACTCCTTCATAGACCAACTCCCCCATTCCCCTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SLESGHSTAATVNVE*HNSFIDQLPHSPLP Trigger: AGGGAGAGGGGAATGGGGGAGTTGGTCTATGAAGGAGTTGTGTCACTCCACATTGACAGTCGCGGCGGTACTGTGCCCGCTCTCCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR TCA 90 bp | CACGGTGAGCTAGGATCGAAAGATGCAACTAAAACATGGTGCGGCTaGCCTCGCCAAGTCAGGGAGTCCTCGGGCCTGGGAGAAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: HGELGSKDATKTWCG*PRQVRESSGLGEDP Trigger: AGGGTCTTCTCCCAGGCCCGAGGACTCCCTGACTTGGCGAGGTCAGCCGCACCATGTTTTAGTTGCATCTTTCGATCCTAGCTCACCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | GAGCTCGCAGAGGTGGTCAGCCTAAATGGTTCCTGGGCAGGCACATaGCCAAGGGGCTGTGTTGTGATTGCTGGAGAAGCTGGGATTGCA | + |
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Preference number: 1 (lower is better) Translates to: ELAEVVSLNGSWAGT*PRGCVVIAGEAGIA Trigger: TGCAATCCCAGCTTCTCCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAACCATTTAGGCTGACCACCTCTGCGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | TTTAGGTCCAGTTATCACAGTCTCCCTCTGGAGCTACATGGGCCTTaGACCTCATCGTCTTGGCTGGGGACAAACCACGGCCCCGACGAG | + |
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Preference number: 1 (lower is better) Translates to: FRSSYHSLPLELHGP*TSSSWLGTNHGPDE Trigger: CTCGTCGGGGCCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGAGGGAGACTGTGATAACTGGACCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | AAGCTGAAGCCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTaGAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCCCTAACA | + |
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Preference number: 1 (lower is better) Translates to: KLKPRACTSRSGSVL*SNRHLSQARPDALT Trigger: TGTTAGGGCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | CACCCAACACCCTGTCCCCAGTGTGTTCCAGCTAAGCCCCAGGCTTaGTCCCTAAGTCACGCTATGCCTATGCCAACTTCTCCACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: HPTPCPQCVPAKPQA*SLSHAMPMPTSPLP Trigger: TGGCAGTGGAGAAGTTGGCATAGGCATAGCGTGACTTAGGGAGCAAGCCTGGGGCTTAGCTGGAACACACTGGGGACAGGGTGTTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CCA 90 bp | AATGGCTCTGAAGCAAAACCTAATGCAAATACAGCCAGCACCCATTaGTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTGGATGG | + |
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Preference number: 1 (lower is better) Translates to: NGSEAKPNANTASTH*SEEPGQVTCLPGGW Trigger: CCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGACCAATGGGTGCTGGCTGTATTTGCATTAGGTTTTGCTTCAGAGCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | CTTCTCCACTGCCATTCACTCCCCTGCAAGCTGAAGCCCAGGGCATaGACATCCAGAAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTA | + |
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Preference number: 1 (lower is better) Translates to: LLHCHSLPCKLKPRA*TSRSGSVLCSNRHL Trigger: TAGATGCCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAGCTTGCAGGGGAGTGAATGGCAGTGGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR TCA 90 bp | TATGCCTATGCCAACTTCTCCACTGCCATTCACTCCCCTGCAAGCTaGAGCCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: YAYANFSTAIHSPAS*SPGHAHPEVALSSA Trigger: TGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAGCTTGCAGGGGAGTGAATGGCAGTGGAGAAGTTGGCATAGGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | AAATGGTTCCTGGGCAGGCACATGCCCAAGGGGCTGTGTTGTGATTaGTGGAGAAGCTGGGATTGCAAGCAACAGAAAGGGGGAGCATGC | + |
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Preference number: 1 (lower is better) Translates to: KWFLGRHMPKGLCCD*WRSWDCKQQKGGAC Trigger: GCATGCTCCCCCTTTCTGTTGCTTGCAATCCCAGCTTCTCCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAACCATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | ACAAACTGGTCAGGCCCGTCAGTGGGGCAAAGGACAGCGGCAGTCTaGAAAAGAGGAAATGCAGTCACTTGGTGTGAAACGACTCACGGT | + |
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Preference number: 1 (lower is better) Translates to: TNWSGPSVGQRTAAV*KRGNAVTWCETTHG Trigger: ACCGTGAGTCGTTTCACACCAAGTGACTGCATTTCCTCTTTTGCAGACTGCCGCTGTCCTTTGCCCCACTGACGGGCCTGACCAGTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | GCCGATGACAGGATGGTCTCCCGTAGACCAGAGAGGCGTGAAGGGTaGCTCAAACAGGGCAAAGCTACTGAATTGACAACTCTCAACAAC | + |
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Preference number: 1 (lower is better) Translates to: ADDRMVSRRPERREG*LKQGKATELTTLNN Trigger: GTTGTTGAGAGTTGTCAATTCAGTAGCTTTGCCCTGTTTGAGGCACCCTTCACGCCTCTCTGGTCTACGGGAGACCATCCTGTCATCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR TCA 90 bp | CAGAGAGGCGTGAAGGGTGCCTCAAACAGGGCAAAGCTACTGAATTaGCAACTCTCAACAACGGAGTCTAGCTACCTGGGTGGACACAGA | + |
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Preference number: 1 (lower is better) Translates to: QRGVKGASNRAKLLN*QLSTTESSYLGGHR Trigger: TCTGTGTCCACCCAGGTAGCTAGACTCCGTTGTTGAGAGTTGTCAATTCAGTAGCTTTGCCCTGTTTGAGGCACCCTTCACGCCTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | GATTGCTGGAGAAGCTGGGATTGCAAGCAACAGAAAGGGGGAGCATaGACTGAGTCGCGGGTAACGCTAACAAAACAAATACACGCCGCA | + |
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Preference number: 1 (lower is better) Translates to: DCWRSWDCKQQKGGA*TESRVTLTKQIHAA Trigger: TGCGGCGTGTATTTGTTTTGTTAGCGTTACCCGCGACTCAGTGCATGCTCCCCCTTTCTGTTGCTTGCAATCCCAGCTTCTCCAGCAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CCA 90 bp | GGGCAAAGGACAGCGGCAGTCTGCAAAAGAGGAAATGCAGTCACTTaGTGTGAAACGACTCACGGTGAGCTAGGATCGAAAGATGCAACT | + |
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Preference number: 1 (lower is better) Translates to: GQRTAAVCKRGNAVT*CETTHGELGSKDAT Trigger: AGTTGCATCTTTCGATCCTAGCTCACCGTGAGTCGTTTCACACCAAGTGACTGCATTTCCTCTTTTGCAGACTGCCGCTGTCCTTTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR GCA 90 bp | ATTGAGATGTCGGTCCTAAATACATGCATCAAGAAACAAAACCATTaGCAAGCCACCACCACCAGAGCAGAGGTAGGGACGGAGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: IEMSVLNTCIKKQNH*QATTTRAEVGTEPL Trigger: CAGTGGCTCCGTCCCTACCTCTGCTCTGGTGGTGGTGGCTTGGCAATGGTTTTGTTTCTTGATGCATGTATTTAGGACCGACATCTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR TCA 90 bp | CAACCCTCTCTTGTGTGCTCCAGGCTCCAAGCCACAGAGAGCTATTaGGATGTCGGTCCTAAATACATGCATCAAGAAACAAAACCATTG | + |
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Preference number: 1 (lower is better) Translates to: QPSLVCSRLQATESY*DVGPKYMHQETKPL Trigger: CAATGGTTTTGTTTCTTGATGCATGTATTTAGGACCGACATCTCAATAGCTCTCTGTGGCTTGGAGCCTGGAGCACACAAGAGAGGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCGGGCCTGGGAGAAGACCCTCAACCAGGACACTTCCCCTCGATGGGGGCCGGGGTGTCACAGAGTCTaGAGAGCGGGCACAGTACCG | + |
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Preference number: 2 (lower is better) Translates to: PRAWEKTLNQDTSPRWGPGCHRV*RAGTVP Trigger: CGGTACTGTGCCCGCTCTCCAGACTCTGTGACACCC...CGGCCCCCATCGAGGGGAAGTGTCCTGGTTGAGGGTCTTCTCCCAGGCCCGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | GTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACCGAAGACTCCTGTCCTaGTCTTGCAAAGGTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VRGARAGDLPPRWMGLDNRRLLS*SCKGGC Trigger: ACAGCCACCTTTGCAAGACCAGGACAGGAGTCTTCG...GTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTGCAGCAACAGGCGCCGCACAGCGGGGTaGGTGACCAATGCCGATGAC | + |
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Preference number: 2 (lower is better) Translates to: LKPRACTSRSGSVLCSNRRRTAG*VTNADD Trigger: GTCATCGGCATTGGTCACCCACCCCGCTGTGCGGCG...CCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCGGGCCTGGGAGAAGACCCTCAACCAGGACACTTCCCCTCGATGGGGGCCGTCTGCTCCTTGGGACTaGAACATGTGTCCACATGAG | + |
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Preference number: 2 (lower is better) Translates to: PRAWEKTLNQDTSPRWGPSAPWD*NMCPHE Trigger: CTCATGTGGACACATGTTCCAGTCCCAAGGAGCAGA...CGGCCCCCATCGAGGGGAAGTGTCCTGGTTGAGGGTCTTCTCCCAGGCCCGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGGAGCTACATGGGCCTTGCACCTCATCGTCTTGGCTGGGGACAAACCACGGCTAGGCCCCAGCCTCTaGGCTCCTGAGAGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SGATWALHLIVLAGDKPRLGPSL*APERRE Trigger: CTCTCTCCTCTCAGGAGCCCAGAGGCTGGGGCCTAG...CCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCGGCTGACCTCGCCAAGTCAGGGAGTCCTCGGGCCTGGGAGAAGACCCTCATGGAGAAGCTGGGATTaGAAGCAACAGAAAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: VRLTSPSQGVLGPGRRPSWRSWD*KQQKGG Trigger: TCCCCCTTTCTGTTGCTTGCAATCCCAGCTTCTCCA...TGAGGGTCTTCTCCCAGGCCCGAGGACTCCCTGACTTGGCGAGGTCAGCCGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGTGTCTCTTCCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTTGTTCCTGGGCAGGCACATaGCCAAGGGGCTGTGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: PKCLFQVRRRGQASTLSCSWAGT*PRGCVV Trigger: CACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGA...ACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGGAAGAGACACTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGTGTCTCTTCCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTTGTGCAGAGTGGCCCAGGTaGGTCAGACCAGATGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PKCLFQVRRRGQASTLSCAEWPR*VRPDAA Trigger: TGCTGCATCTGGTCTGACCCACCTGGGCCACTCTGC...ACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGGAAGAGACACTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCTGACCTCGCCAAGTCAGGGAGTCCTCGGGCCTGGGAGAAGACCCTCATCACTCAGGGTAAGGTaGGTGGCACATGGAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: VRLTSPSQGVLGPGRRPSSLRVR*VAHGNS Trigger: ACTGTTTCCATGTGCCACCCACCTTACCCTGAGTGA...TGAGGGTCTTCTCCCAGGCCCGAGGACTCCCTGACTTGGCGAGGTCAGCCGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | GGGACGCCTCTCTTTAGCTCCACTGGCTGCCACCGAGTCCAACATGAGGTCCTACCCTCTGGAGCTACATaGGCCTTGCACCTCATCGTC | + |
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Preference number: 2 (lower is better) Translates to: GTPLFSSTGCHRVQHEVLPSGAT*ALHLIV Trigger: GACGATGAGGTGCAAGGCCCATGTAGCTCCAGAGGG...TAGGACCTCATGTTGGACTCGGTGGCAGCCAGTGGAGCTAAAGAGAGGCGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR CAA 90 bp | GTGTCTCTTCCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTaGTGTGCTCCAGGCTCCAAGCCACAGAGAGCTATTGAGATGTCG | + |
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Preference number: 2 (lower is better) Translates to: VSLPGPTQRASLNPL*CAPGSKPQRAIEMS Trigger: CGACATCTCAATAGCTCTCTGTGGCTTGGAGCCTGGAGCACACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGGAAGAGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCCACCGAGTCCAACATGAGGTCCTAGAGAGATGCCAAAGGCGAGGACCTCAGCCTCTGGGCTCCTaGGAGGAGAGAGATGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: GCHRVQHEVLERCQRRGPQPLGS*EERDVF Trigger: AAAGACATCTCTCTCCTCTCAGGAGCCCAGAGGCTG...AGGTCCTCGCCTTTGGCATCTCTCTAGGACCTCATGTTGGACTCGGTGGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTGCCACCGAGTCCAACATGAGGTCCTAGAGAGATGCCAAAGGCGAGGACCTCCGAAAGGTCATGCATaGGACTCAGCTGCTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GCHRVQHEVLERCQRRGPPKGHA*DSAAGD Trigger: ATCCCCAGCAGCTGAGTCTCATGCATGACCTTTCGG...AGGTCCTCGCCTTTGGCATCTCTCTAGGACCTCATGTTGGACTCGGTGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCGAGAGGCGTGAAGGGTaGCTCAAACAGGGCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: KWLCPLQQQASISGPPRCERREG*LKQGKA Trigger: AGCTTTGCCCTGTTTGAGGCACCCTTCACGCCTCTC...GCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGTGTCTCTTCCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTTGTCTCCTGTCCTGGTCTTaGAAAGGTGGCTGTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PKCLFQVRRRGQASTLSCLLSWS*KGGCAG Trigger: ACCAGCACAGCCACCTTTGCAAGACCAGGACAGGAG...ACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGGAAGAGACACTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTGCAGCAACAGGGACGGAGAAAGTCTCTaGAAGAGGCCGGGTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LKPRACTSRSGSVLCSNRDGESL*KRPGSR Trigger: CCTAGAACCCGGCCTCTTCCAGAGACTTTCTCCGTC...CCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCTGACCTCGCCAAGTCAGGGAGTCCTCGGGCCTGGGAGAAGACCCTCAAAGGTGGGTGGCACATaGAAACAGTGTTGTCATATG | + |
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Preference number: 2 (lower is better) Translates to: VRLTSPSQGVLGPGRRPSKVGGT*KQCCHM Trigger: CATATGACAACACTGTTTCCATGTGCCACCCACCTT...TGAGGGTCTTCTCCCAGGCCCGAGGACTCCCTGACTTGGCGAGGTCAGCCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR TCA 90 bp | GGGACGCCTCTCTTTAGCTCCACTGGCTGCCACCGAGTCCAACATGAGGTCCTATGGAGACAGGCAGCCTaGATGGCTCTGAAGCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: GTPLFSSTGCHRVQHEVLWRQAA*MALKQN Trigger: GTTTTGCTTCAGAGCCATTCAGGCTGCCTGTCTCCA...TAGGACCTCATGTTGGACTCGGTGGCAGCCAGTGGAGCTAAAGAGAGGCGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR GCA 90 bp | TCTGGAGCTACATGGGCCTTGCACCTCATCGTCTTGGCTGGGGACAAACCACGGGGGCTGTGTTGTGATTaGTGGAGAAGCTGGGATTGC | + |
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Preference number: 2 (lower is better) Translates to: SGATWALHLIVLAGDKPRGLCCD*WRSWDC Trigger: GCAATCCCAGCTTCTCCAGCAATCACAACACAGCCC...CCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| 3UTR-3UTR CCA 90 bp | AAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCGGTGAGTACTCTCAGTaGAACCCCAGGAGTCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KWLCPLQQQASISGPPRCGEYSQ*NPRSLP Trigger: TGGAAGACTCCTGGGGTTCCACTGAGAGTACTCACC...GCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGACGCCTCTCTTTAGCTCCACTGGCTGCCACCGAGTCCAACATGAGGTCCTAATGCACATCCAGAAGTaGCTCTGTCCTCTGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GTPLFSSTGCHRVQHEVLMHIQK*LCPLQQ Trigger: TTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCAT...TAGGACCTCATGTTGGACTCGGTGGCAGCCAGTGGAGCTAAAGAGAGGCGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTAACAAGAAGCAGGTGGCTATGGGCCGGGAGCCCAGCGAGCAGCGAAGACTTGCAAAGGTGGCTGTaGTGGTTAGTCAGTCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: ELTRSRWLWAGSPASSEDLQRWL*WLVSHF Trigger: AAAGTGACTGACTAACCAGCACAGCCACCTTTGCAA...GTCTTCGCTGCTCGCTGGGCTCCCGGCCCATAGCCACCTGCTTCTTGTTAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAGCTACATGGGCCTTGCACCTCATCGTCTTGGCTGGGGACAAACCACGGCTGTGTTGTGATTGCTaGAGAAGCTGGGATTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SGATWALHLIVLAGDKPRLCCDC*RSWDCK Trigger: CTTGCAATCCCAGCTTCTCCAGCAATCACAACACAG...CCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGAGCTACATGGGCCTTGCACCTCATCGTCTTGGCTGGGGACAAACCACGGGCAAAGCTACTGAATTaGCAACTCTCAACAACGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SGATWALHLIVLAGDKPRAKLLN*QLSTTE Trigger: CTCCGTTGTTGAGAGTTGTCAATTCAGTAGCTTTGC...CCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCACTGTCAATGTGGAGTaGCACAACTCCTTCATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KWLCPLQQQASISGPPRCTVNVE*HNSFID Trigger: GTCTATGAAGGAGTTGTGTCACTCCACATTGACAGT...GCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGCCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTGCAGCAACAGGAAGAAACAAAACCATTaGCAAGCCACCACCACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LKPRACTSRSGSVLCSNRKKQNH*QATTTR Trigger: TCTGGTGGTGGTGGCTTGGCAATGGTTTTGTTTCTT...CCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGACGCCTCTCTTTAGCTCCACTGGCTGCCACCGAGTCCAACATGAGGTCCTAGATTGCTGGAGAAGCTaGGATTGCAAGCAACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GTPLFSSTGCHRVQHEVLDCWRS*DCKQQK Trigger: TTTCTGTTGCTTGCAATCCCAGCTTCTCCAGCAATC...TAGGACCTCATGTTGGACTCGGTGGCAGCCAGTGGAGCTAAAGAGAGGCGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGAAGCCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTGCAGCAACAGGCATTTGGCATTGAAATaGCAGATGATGTCATGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LKPRACTSRSGSVLCSNRHLALK*QMMSWS Trigger: GGACCATGACATCATCTGTCATTTCAATGCCAAATG...CCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 90 bp | GAGAGATGTCTTTCCGTGGGTTCAGAGGCGGTTTTGTTGTTGTTGTaGGTTTTCTTGTGGTCAAGCCAAGACCATGCAGAGGAGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ERCLSVGSEAVLLLL*VFLWSSQDHAEEGR Trigger: CCTGCCCTCCTCTGCATGGTCTTGGCTTGACCACAAGAAAACCAACAACAACAACAAAACCGCCTCTGAACCCACGGAAAGACATCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 90 bp | GGAGAGAGATGTCTTTCCGTGGGTTCAGAGGCGGTTTTGTTGTTGTaGTTGGTTTTCTTGTGGTCAAGCCAAGACCATGCAGAGGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GERCLSVGSEAVLLL*LVFLWSSQDHAEEG Trigger: GCCCTCCTCTGCATGGTCTTGGCTTGACCACAAGAAAACCAACAACAACAACAAAACCGCCTCTGAACCCACGGAAAGACATCTCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 90 bp | ATGGGCCTCGACAACAACGTGGAAAGCCACAAAGAAACCTTCCAGTaGTCACCTGCCTCCACATACACCTCCTCCCTATCCCCCATTTTT | + |
|
Preference number: 2 (lower is better) Translates to: MGLDNNVESHKETFQ*SPASTYTSSLSPIF Trigger: AAAAATGGGGGATAGGGAGGAGGTGTATGTGGAGGCAGGTGACAACTGGAAGGTTTCTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGACAGCGGCAGTCTGCAAAAGAGGAAATGCAGTCACTTGGTGTGAAACGACTGTCAAGCCAAGACCATaGAGAGGAGGGCAGGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RTAAVCKRGNAVTWCETTVKPRP*RGGQEN Trigger: GTTTTCCTGCCCTCCTCTGCATGGTCTTGGCTTGAC...AGTCGTTTCACACCAAGTGACTGCATTTCCTCTTTTGCAGACTGCCGCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGACGCCTCTCTTTAGCTCCACTGGCTGCCACCGAGTCCAACATGAGGTCCTAAAGGAGATGGATCTTTaGTGTTTCCTCAAAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: GTPLFSSTGCHRVQHEVLKEMDL*CFLKVT Trigger: AGTGACTTTGAGGAAACAGCAAAGATCCATCTCCTT...TAGGACCTCATGTTGGACTCGGTGGCAGCCAGTGGAGCTAAAGAGAGGCGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGACAGCGGCAGTCTGCAAAAGAGGAAATGCAGTCACTTGGTGTGAAACGACTTGCTGCTGTAGAGAATaGGAAGCCCTGGTCCACATG | + |
|
Preference number: 2 (lower is better) Translates to: RTAAVCKRGNAVTWCETTCCCRE*EALVHM Trigger: CATGTGGACCAGGGCTTCCCATTCTCTACAGCAGCA...AGTCGTTTCACACCAAGTGACTGCATTTCCTCTTTTGCAGACTGCCGCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 90 bp | AGAGGAGAGAGATGTCTTTCCGTGGGTTCAGAGGCGGTTTTGTTGTaGTTGTTGGTTTTCTTGTGGTCAAGCCAAGACCATGCAGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RGERCLSVGSEAVLL*LLVFLWSSQDHAEE Trigger: CTCCTCTGCATGGTCTTGGCTTGACCACAAGAAAACCAACAACAACAACAAAACCGCCTCTGAACCCACGGAAAGACATCTCTCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 90 bp | CTGAGAGGAGAGAGATGTCTTTCCGTGGGTTCAGAGGCGGTTTTGTaGTTGTTGTTGGTTTTCTTGTGGTCAAGCCAAGACCATGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRGERCLSVGSEAVL*LLLVFLWSSQDHAE Trigger: CTCTGCATGGTCTTGGCTTGACCACAAGAAAACCAACAACAACAACAAAACCGCCTCTGAACCCACGGAAAGACATCTCTCTCCTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR TCA 72 bp | CAGCCAGCACCCATTGGTCCGAGGAGCCAGGGCAGGTaGCCTGCCTCCCCGGTGGATGGGCCTCGACAACAA | + |
|
Preference number: 3 (lower is better) Translates to: QPAPIGPRSQGR*PASPVDGPRQQ Trigger: TTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGACCAATGGGTGCTGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GCGGCTGACCTCGCCAAGTCAGGGAGTCCTCGGGCCTaGGAGAAGACCCTCAACCAGGACACTTCCCCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: AADLAKSGSPRA*EKTLNQDTSPR Trigger: TCGAGGGGAAGTGTCCTGGTTGAGGGTCTTCTCCCAGGCCCGAGGACTCCCTGACTTGGCGAGGTCAGCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTaGATGGGCCTCGACAACAACGTGGAAAGCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VRGARAGDLPPR*MGLDNNVESHK Trigger: TTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | CCTCTGGAGCTACATGGGCCTTGCACCTCATCGTCTTaGCTGGGGACAAACCACGGCCCCGACGAGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLELHGPCTSSS*LGTNHGPDESH Trigger: GTGGCTCTCGTCGGGGCCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GTCTCTGGAAGAGGCCGGGTTCTAGGCCCCAGCCTCTaGGCTCCTGAGAGGAGAGAGATGTCTTTCCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSGRGRVLGPSL*APERREMSFRG Trigger: CCCACGGAAAGACATCTCTCTCCTCTCAGGAGCCCAGAGGCTGGGGCCTAGAACCCGGCCTCTTCCAGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | CAGAGCAGAGGTAGGGACGGAGCCACTGAGGCAGAGTaGCCCAGGTGGGTCAGACCAGATGCAGCAGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QSRGRDGATEAE*PRWVRPDAAEG Trigger: ACCTTCTGCTGCATCTGGTCTGACCCACCTGGGCCACTCTGCCTCAGTGGCTCCGTCCCTACCTCTGCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTGGATaGGCCTCGACAACAACGTGGAAAGCCACAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EEPGQVTCLPGG*ASTTTWKATKK Trigger: TTTCTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | ATGGGAAGCCCTGGTCCACATGTTGATGGCACTGGGTaGGGACGCCTCTCTTTAGCTCCACTGGCTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: MGSPGPHVDGTG*GRLSLAPLAAT Trigger: GGTGGCAGCCAGTGGAGCTAAAGAGAGGCGTCCCCACCCAGTGCCATCAACATGTGGACCAGGGCTTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | CCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTaGAGCAACAGGCATCTATCTCAGGCCCGCCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PRACTSRSGSVL*SNRHLSQARPD Trigger: ATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | GATGGCCTTAGCACTCAGGCTACGCAGCCGAGCATTTaGCACCCAACACCCTGTCCCCAGTGTGTTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DGLSTQATQPSI*HPTPCPQCVPA Trigger: AGCTGGAACACACTGGGGACAGGGTGTTGGGTGGCAAATGCTCGGCTGCGTAGCCTGAGTGCTAAGGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GACTGGAACATGTGTCCACATGAGACCCGAAGCAGTTaGCCACTCCTCGCCAGTTCTTCAGCCTGGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DWNMCPHETRSS*PLLASSSAWGS Trigger: GCTGCCCCAGGCTGAAGAACTGGCGAGGAGTGGCCAACTGCTTCGGGTCTCATGTGGACACATGTTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GAGGCTGCTAGGCTAACAGAGTTAACAAGAAGCAGGTaGCTATGGGCCGGGAGCCCAGCGAGCAGCGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EAARLTELTRSR*LWAGSPASSED Trigger: GTCTTCGCTGCTCGCTGGGCTCCCGGCCCATAGCCACCTGCTTCTTGTTAACTCTGTTAGCCTAGCAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAGCTACATGGGCCTTGCACCTCATCGTCTTGGCTGGGGACAAACCACGGGTGAGGCTCTGCTCCTaGGGACTGGAACATGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SGATWALHLIVLAGDKPRVRLCS*GLEHVS Trigger: GGACACATGTTCCAGTCCCAAGGAGCAGAGCCTCAC...CCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCCAAAGCCTCCCCCTCTaGCTCAGCTTTAGGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KWLCPLQQQASISGPPRCQSLPL*LSFRSS Trigger: ACTGGACCTAAAGCTGAGCAAGAGGGGGAGGCTTTG...GCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR TCA 72 bp | GCTGCTGTAGAGAATGGGAAGCCCTGGTCCACATGTTaGTGGCACTGGGTGGGGACGCCTCTCTTTAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AAVENGKPWSTC*WHWVGTPLFSS Trigger: GGAGCTAAAGAGAGGCGTCCCCACCCAGTGCCATCAACATGTGGACCAGGGCTTCCCATTCTCTACAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | CTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATaGCCTAACACAGAGCATGCGCACCCTGTCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: LQQQASISGPPR*PNTEHAHPVIQ Trigger: CTGTATGACAGGGTGCGCATGCTCTGTGTTAGGGCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | TGCCATTCACTCCCCTGCAAGCTGAAGCCCAGGGCATaGACATCCAGAAGTGGCTCTGTCCTCTGCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: CHSLPCKLKPRA*TSRSGSVLCSN Trigger: GTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAGCTTGCAGGGGAGTGAATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | GGCTGCCACCGAGTCCAACATGAGGTCCTAGAGAGATaGCAAAGGCGAGGACCTCCCAGACACTGCAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GCHRVQHEVLER*QRRGPPRHCKL Trigger: AAGCTTGCAGTGTCTGGGAGGTCCTCGCCTTTGGCATCTCTCTAGGACCTCATGTTGGACTCGGTGGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GCTGAGCTCGCAGAGGTGGTCAGCCTAAATGGTTCCTaGGCAGGCACATGCCCAAGGGGCTGTGTTGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: AELAEVVSLNGS*AGTCPRGCVVI Trigger: AATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAACCATTTAGGCTGACCACCTCTGCGAGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GAAGCAAAACCTAATGCAAATACAGCCAGCACCCATTaGTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: EAKPNANTASTH*SEEPGQVTCLP Trigger: GGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGACCAATGGGTGCTGGCTGTATTTGCATTAGGTTTTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | GAGGTGGTCAGCCTAAATGGTTCCTGGGCAGGCACATaGCCAAGGGGCTGTGTTGTGATTGCTGGAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EVVSLNGSWAGT*PRGCVVIAGEA Trigger: AGCTTCTCCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAACCATTTAGGCTGACCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | CCCTGTCCCCAGTGTGTTCCAGCTAAGCCCCAGGCTTaGTCCCTAAGTCACGCTATGCCTATGCCAACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PCPQCVPAKPQA*SLSHAMPMPTS Trigger: AGAAGTTGGCATAGGCATAGCGTGACTTAGGGAGCAAGCCTGGGGCTTAGCTGGAACACACTGGGGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | TTTCCCCTCCCTGGTCCCCCAGAATTCCTGGTCTGCTaGTGTAGAGAATGGGAAGCCCTGGTCCACATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FPLPGPPEFLVC*CREWEALVHML Trigger: CAACATGTGGACCAGGGCTTCCCATTCTCTACAGCAGCAGACCAGGAATTCTGGGGGACCAGGGAGGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GGCAGGCACATGCCCAAGGGGCTGTGTTGTGATTGCTaGAGAAGCTGGGATTGCAAGCAACAGAAAGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRHMPKGLCCDC*RSWDCKQQKGG Trigger: TCCCCCTTTCTGTTGCTTGCAATCCCAGCTTCTCCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | ACCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTaGAAAGCCACAAAGAAACCTTCCAGTTGTCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: TCLPGGWASTTT*KATKKPSSCHL Trigger: CAGGTGACAACTGGAAGGTTTCTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR TCA 72 bp | GTTCCTGGGCAGGCACATGCCCAAGGGGCTGTGTTGTaGTTGCTGGAGAAGCTGGGATTGCAAGCAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPGQAHAQGAVL*LLEKLGLQATE Trigger: TTCTGTTGCTTGCAATCCCAGCTTCTCCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | TCAGGCCCGTCAGTGGGGCAAAGGACAGCGGCAGTCTaGAAAAGAGGAAATGCAGTCACTTGGTGTGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: SGPSVGQRTAAV*KRGNAVTWCET Trigger: CGTTTCACACCAAGTGACTGCATTTCCTCTTTTGCAGACTGCCGCTGTCCTTTGCCCCACTGACGGGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | AACGCTAACAAAACAAATACACGCCGCACAGCGGGGTaGGTGACCAATGCCGATGACAGGATGGTCTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: NANKTNTRRTAG*VTNADDRMVSR Trigger: ACGGGAGACCATCCTGTCATCGGCATTGGTCACCCACCCCGCTGTGCGGCGTGTATTTGTTTTGTTAGCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | GAGACTCAGCTGCTGGGGATAGGTGAGTACTCTCAGTaGAACCCCAGGAGTCTTCCACCTGCTTATAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: ETQLLGIGEYSQ*NPRSLPPAYST Trigger: GGTGCTATAAGCAGGTGGAAGACTCCTGGGGTTCCACTGAGAGTACTCACCTATCCCCAGCAGCTGAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | CTGCAAGCTGAAGCCCAGGGCATGCACATCCAGAAGTaGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LQAEAQGMHIQK*LCPLQQQASIS Trigger: TGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAGCTTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCAAAGAAACCTTCCAGTaGTCACCTGCCTCCACATAC | + |
|
Preference number: 3 (lower is better) Translates to: KWLCPLQQQASISGPPRCKETFQ*SPASTY Trigger: GTATGTGGAGGCAGGTGACAACTGGAAGGTTTCTTT...GCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | ATGCCCAAGGGGCTGTGTTGTGATTGCTGGAGAAGCTaGGATTGCAAGCAACAGAAAGGGGGAGCATGCACT | + |
|
Preference number: 3 (lower is better) Translates to: MPKGLCCDCWRS*DCKQQKGGACT Trigger: AGTGCATGCTCCCCCTTTCTGTTGCTTGCAATCCCAGCTTCTCCAGCAATCACAACACAGCCCCTTGGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | CATATGGAGCTCTTACAAACTGGTCAGGCCCGTCAGTaGGGCAAAGGACAGCGGCAGTCTGCAAAAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HMELLQTGQARQ*GKGQRQSAKEE Trigger: TTCCTCTTTTGCAGACTGCCGCTGTCCTTTGCCCCACTGACGGGCCTGACCAGTTTGTAAGAGCTCCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | AGGATGGTCTCCCGTAGACCAGAGAGGCGTGAAGGGTaGCTCAAACAGGGCAAAGCTACTGAATTGACAACT | + |
|
Preference number: 3 (lower is better) Translates to: RMVSRRPERREG*LKQGKATELTT Trigger: AGTTGTCAATTCAGTAGCTTTGCCCTGTTTGAGGCACCCTTCACGCCTCTCTGGTCTACGGGAGACCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR TCA 72 bp | CTGGGATTGCAAGCAACAGAAAGGGGGAGCATGCACTaGGTCGCGGGTAACGCTAACAAAACAAATACACGC | + |
|
Preference number: 3 (lower is better) Translates to: LGLQATERGSMH*VAGNANKTNTR Trigger: GCGTGTATTTGTTTTGTTAGCGTTACCCGCGACTCAGTGCATGCTCCCCCTTTCTGTTGCTTGCAATCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | GTTGTTGTTGGTTTTCTTGTGGTCAAGCCAAGACCATaGAGAGGAGGGCAGGAAAACCCAGGAGAGGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: VVVGFLVVKPRP*RGGQENPGEVT Trigger: GGTTACCTCTCCTGGGTTTTCCTGCCCTCCTCTGCATGGTCTTGGCTTGACCACAAGAAAACCAACAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | CATTGTCAGTATCTGACAGTACCAGCACTGTTCCTTTaGCTGAGGGGAGGGTTCACAGTCACTCAGGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: HCQYLTVPALFL*LRGGFTVTQGK Trigger: CTTACCCTGAGTGACTGTGAACCCTCCCCTCAGGCAAAGGAACAGTGCTGGTACTGTCAGATACTGACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR TCA 72 bp | GTGAAGGGTGCCTCAAACAGGGCAAAGCTACTGAATTaGCAACTCTCAACAACGGAGTCTAGCTACCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VKGASNRAKLLN*QLSTTESSYLG Trigger: ACCCAGGTAGCTAGACTCCGTTGTTGAGAGTTGTCAATTCAGTAGCTTTGCCCTGTTTGAGGCACCCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CCA 72 bp | ACAGCGGCAGTCTGCAAAAGAGGAAATGCAGTCACTTaGTGTGAAACGACTCACGGTGAGCTAGGATCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TAAVCKRGNAVT*CETTHGELGSK Trigger: TTTCGATCCTAGCTCACCGTGAGTCGTTTCACACCAAGTGACTGCATTTCCTCTTTTGCAGACTGCCGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTGTGATTGCTGGAGAAGCTGGGATTGCAAGCAACAGAAAGGGGGAGCATGCAGGCAAAGCTACTGAATaGACAACTCTCAACAACGGA | + |
|
Preference number: 3 (lower is better) Translates to: VVIAGEAGIASNRKGEHAGKATE*TTLNNG Trigger: TCCGTTGTTGAGAGTTGTCAATTCAGTAGCTTTGCC...TGCATGCTCCCCCTTTCTGTTGCTTGCAATCCCAGCTTCTCCAGCAATCACAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | AGAAGCTGGGATTGCAAGCAACAGAAAGGGGGAGCATaGACTGAGTCGCGGGTAACGCTAACAAAACAAATA | + |
|
Preference number: 3 (lower is better) Translates to: RSWDCKQQKGGA*TESRVTLTKQI Trigger: TATTTGTTTTGTTAGCGTTACCCGCGACTCAGTGCATGCTCCCCCTTTCTGTTGCTTGCAATCCCAGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR TCA 72 bp | GACCAACTCCCCCATTCCCCTCTCCCTGTTCTCTTCTaGGCTCAAGCAACTAGAACCTTAAGATATGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: DQLPHSPLPVLF*AQATRTLRYVQ Trigger: TTGTACATATCTTAAGGTTCTAGTTGCTTGAGCTCAGAAGAGAACAGGGAGAGGGGAATGGGGGAGTTGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | CCACAGAGAGCTATTGAGATGTCGGTCCTAAATACATaGATCAAGAAACAAAACCATTGCCAAGCCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: PQRAIEMSVLNT*IKKQNHCQATT Trigger: GGTGGTGGCTTGGCAATGGTTTTGTTTCTTGATGCATGTATTTAGGACCGACATCTCAATAGCTCTCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR GCA 72 bp | GTCATGGATTTAGCCAGGGATAAGGAGATGGATCTTTaGTGTTTCCTCAAAGTCACTGAATGCTTTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: VMDLARDKEMDL*CFLKVTECFGT Trigger: TGTCCCAAAGCATTCAGTGACTTTGAGGAAACAGCAAAGATCCATCTCCTTATCCCTGGCTAAATCCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | CCTCGGGCCTGGGAGAAGACCCTCAACCAGGACACTTCCCCTCGATGGGGGCCGAGGCTGGTGCGGGATTaGTCCCGTTGGAGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRAWEKTLNQDTSPRWGPRLVRD*SRWRLD Trigger: ATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCT...CGGCCCCCATCGAGGGGAAGTGTCCTGGTTGAGGGTCTTCTCCCAGGCCCGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR TCA 90 bp | GAGTTAACAAGAAGCAGGTGGCTATGGGCCGGGAGCCCAGCGAGCAGCGAAGACTCAGCGCGGAGTTGGTaGGGCGCAGAGAGGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELTRSRWLWAGSPASSEDSARSW*GAERSG Trigger: CCCTGACCTCTCTGCGCCTCACCAACTCCGCGCTGA...GTCTTCGCTGCTCGCTGGGCTCCCGGCCCATAGCCACCTGCTTCTTGTTAACTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR TCA 90 bp | GTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACGGGAAGCGGGAGGCTTaGAAAATCATGAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRGARAGDLPPRWMGLDNGKREA*KIMNLS Trigger: GGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCC...GTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTGGAAAGCCCTGTCTGGTTGCATGTaGGGGATGGCCCACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQVTCLPGGWASTTTWKALSGCM*GMAHFS Trigger: GGAGAAGTGGGCCATCCCCCACATGCAACCAGACAG...GGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | AAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCGGTCCCGTTGGAGGCTaGATGCACCGGGCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: KWLCPLQQQASISGPPRCGPVGG*MHRAGS Trigger: GGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACC...GCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGCCACCGAGTCCAACATGAGGTCCTAGAGAGATGCCAAAGGCGAGGACCTCCGTTGGAGGCTGGATaGACCGGGCAGGATCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCHRVQHEVLERCQRRGPPLEAG*TGQDPV Trigger: CACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGG...AGGTCCTCGCCTTTGGCATCTCTCTAGGACCTCATGTTGGACTCGGTGGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | GGGACGCCTCTCTTTAGCTCCACTGGCTGCCACCGAGTCCAACATGAGGTCCTACATCCATCTGAGCGCTaGCACCAGGGGCAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTPLFSSTGCHRVQHEVLHPSER*HQGQRL Trigger: CAGCCTCTGCCCCTGGTGCCAGCGCTCAGATGGATG...TAGGACCTCATGTTGGACTCGGTGGCAGCCAGTGGAGCTAAAGAGAGGCGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | TCTGGAGCTACATGGGCCTTGCACCTCATCGTCTTGGCTGGGGACAAACCACGGGTGAGGTGGGTGGCGTaGTCATGGGTCGGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGATWALHLIVLAGDKPRVRWVA*SWVGSH Trigger: ATGGGACCCGACCCATGACCACGCCACCCACCTCAC...CCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTGTCTCTTCCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTTGTGTTGCATGTGGGGGATaGCCCACTTCTCCGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKCLFQVRRRGQASTLSCVACGG*PTSPPP Trigger: GGGAGGCGGAGAAGTGGGCCATCCCCCACATGCAAC...ACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGGAAGAGACACTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR TCA 90 bp | AAGTGGCTCTGTCCTCTGCAGCAACAGGCATCTATCTCAGGCCCGCCCAGATGCGAAGGGTTCAGGCAGTaGGGTGGGTGGCGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KWLCPLQQQASISGPPRCEGFRQ*GGWRGH Trigger: ATGACCACGCCACCCACCTCACTGCCTGAACCCTTC...GCATCTGGGCGGGCCTGAGATAGATGCCTGTTGCTGCAGAGGACAGAGCCACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGCCACCGAGTCCAACATGAGGTCCTAGAGAGATGCCAAAGGCGAGGACCTAGAGGGCAAGGCTGGTaGGGGATTGGTCCCGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCHRVQHEVLERCQRRGPRGQGW*GIGPVG Trigger: TCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCT...AGGTCCTCGCCTTTGGCATCTCTCTAGGACCTCATGTTGGACTCGGTGGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | GGCTGCCACCGAGTCCAACATGAGGTCCTAGAGAGATGCCAAAGGCGAGGACCTGTTCAGGCAGTGAGGTaGGTGGCGTGGTCATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCHRVQHEVLERCQRRGPVQAVR*VAWSWV Trigger: GACCCATGACCACGCCACCCACCTCACTGCCTGAAC...AGGTCCTCGCCTTTGGCATCTCTCTAGGACCTCATGTTGGACTCGGTGGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTGTCTCTTCCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTTGTCCCGCACAGCCCTATTaGACGCGGATGTCTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKCLFQVRRRGQASTLSCPAQPY*TRMSSG Trigger: TCCGGAAGACATCCGCGTCCAATAGGGCTGTGCGGG...ACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGGAAGAGACACTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | CCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTaGTGTGCTCCAGGCTCCAAGCCACAGAGAGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: PGPTQRASLNPL*CAPGSKPQRAI Trigger: AATAGCTCTCTGTGGCTTGGAGCCTGGAGCACACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCCAGGGCATGCACATCCAGAAGTGGCTCTGTCCTCTGCAGCAACAGGTCGCAAAGGGCTGTCTaGTTGCATGTGGGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKPRACTSRSGSVLCSNRSQRAV*LHVGDG Trigger: GCCATCCCCCACATGCAACCAGACAGCCCTTTGCGA...CCTGTTGCTGCAGAGGACAGAGCCACTTCTGGATGTGCATGCCCTGGGCTTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTGTCTCTTCCAGGTCCGACGCAGAGGGCAAGCCTCAACCCTCTCTTGTGGGACTTGTAGGTTCTaGGGAGCTCAGCCAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PKCLFQVRRRGQASTLSCGTCRF*GAQPET Trigger: GGTTTCTGGCTGAGCTCCGCAGAACCTACAAGTCCC...ACAAGAGAGGGTTGAGGCTTGCCCTCTGCGTCGGACCTGGAAGAGACACTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTAACAAGAAGCAGGTGGCTATGGGCCGGGAGCCCAGCGAGCAGCGAAGACCTGGGCTTTCAGTTTTaGAGGTCCGAGGTTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ELTRSRWLWAGSPASSEDLGFQF*RSEVGP Trigger: TGGTCCAACCTCGGACCTCCAAAACTGAAAGCCCAG...GTCTTCGCTGCTCGCTGGGCTCCCGGCCCATAGCCACCTGCTTCTTGTTAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGAGGCTGCTAGGCTAACAGAGTTAACAAGAAGCAGGTGGCTATGGGCCCGGGATTGGTCCCGTTaGAGGCTGGATGCACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSEAARLTELTRSRWLWARDWSR*RLDAPG Trigger: GCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCG...GGCCCATAGCCACCTGCTTCTTGTTAACTCTGTTAGCCTAGCAGCCTCACTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | GATGCCAAAGGCGAGGACCTCCCAGACACTGCAAGCTaGCCTGCCTGTCCAAGCTCCAGATCTCACTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: DAKGEDLPDTAS*PACPSSRSHSL Trigger: TAGGGAGTGAGATCTGGAGCTTGGACAGGCAGGCAAGCTTGCAGTGTCTGGGAGGTCCTCGCCTTTGGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CCA 90 bp | CCTAAATGGTTCCTGGGCAGGCACATGCCCAAGGGGCTGTGTTGTGATTGCTGGACCAGGGGCAGAGGCTaGGCTTTCAGTTTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKWFLGRHMPKGLCCDCWTRGRG*AFSFGG Trigger: ACCTCCAAAACTGAAAGCCCAGCCTCTGCCCCTGGT...CCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAACCATTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | CAGTTATCACAGTCTCCCTCTGGAGCTACATGGGCCTaGCACCTCATCGTCTTGGCTGGGGACAAACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QLSQSPSGATWA*HLIVLAGDKPR Trigger: CCGTGGTTTGTCCCCAGCCAAGACGATGAGGTGCAAGGCCCATGTAGCTCCAGAGGGAGACTGTGATAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGCCACCGAGTCCAACATGAGGTCCTAGAGAGATGCCAAAGGCGAGGACCTATGAACCTGTCCATCTaGATCAGGAACCCTGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCHRVQHEVLERCQRRGPMNLSI*IRNPAN Trigger: GTTGGCAGGGTTCCTGATGCAGATGGACAGGTTCAT...AGGTCCTCGCCTTTGGCATCTCTCTAGGACCTCATGTTGGACTCGGTGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR TCA 90 bp | GTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTGGAAAGCCACAAAGAGGCTTGAAAAATCATaGACCTGTCCATCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VTCLPGGWASTTTWKATKRLEKS*TCPSAS Trigger: TGATGCAGATGGACAGGTTCATGATTTTTCAAGCCT...CTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | GTCGGTCCTAAATACATGCATCAAGAAACAAAACCATaGCCAAGCCACCACCACCAGAGCAGAGGTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGPKYMHQETKP*PSHHHQSRGRD Trigger: GTCCCTACCTCTGCTCTGGTGGTGGTGGCTTGGCAATGGTTTTGTTTCTTGATGCATGTATTTAGGACCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | GAGAGATGTCTTTCCGTGGGTTCAGAGGCGGTTTTGTaGTTGTTGTTGGTTTTCTTGTGGTCAAGCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERCLSVGSEAVL*LLLVFLWSSQD Trigger: GTCTTGGCTTGACCACAAGAAAACCAACAACAACAACAAAACCGCCTCTGAACCCACGGAAAGACATCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | AGATGTCTTTCCGTGGGTTCAGAGGCGGTTTTGTTGTaGTTGTTGGTTTTCTTGTGGTCAAGCCAAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCLSVGSEAVLL*LLVFLWSSQDH Trigger: ATGGTCTTGGCTTGACCACAAGAAAACCAACAACAACAACAAAACCGCCTCTGAACCCACGGAAAGACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | ACTAGAACCTTAAGATATGTACAAAGCCTCCCCCTCTaGCTCAGCTTTAGGTCCAGTTATCACAGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRTLRYVQSLPL*LSFRSSYHSLP Trigger: AGGGAGACTGTGATAACTGGACCTAAAGCTGAGCAAGAGGGGGAGGCTTTGTACATATCTTAAGGTTCTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| 3UTR CAA 72 bp | AGAACGAATCCCGAGGAAGCAACTTTGGCTCCTTTCTaGGAGGAAAACCTGACACATTGTCAGTATCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RTNPEEATLAPF*EENLTHCQYLT Trigger: TGTCAGATACTGACAATGTGTCAGGTTTTCCTCCAAGAAAGGAGCCAAAGTTGCTTCCTCGGGATTCGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS CCA 90 bp | GAGGCTGGATGCACCGGGCAGGATCCTGTGCCAGCTGCGGCCAGTTaGCGACACAACATCTGGCGCTCCCGCTCTCGCTCCCGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAGCTGQDPVPAAAS*RHNIWRSRSRSRTA Trigger: GGCTGTGCGGGAGCGAGAGCGGGAGCGCCAGATGTTGTGTCGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS CCA 90 bp | GGTTCCGGCCACGAGAGGGCAAGGCTGGTGCGGGATTGGTCCCGTTaGAGGCTGGATGCACCGGGCAGGATCCTGTGCCAGCTGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGHERARLVRDWSR*RLDAPGRILCQLRP Trigger: TGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCTCGTGGCCGGAACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS GCA 90 bp | GGTCCCGTTGGAGGCTGGATGCACCGGGCAGGATCCTGTGCCAGCTaGGGCCAGTTGGCGACACAACATCTGGCGCTCCCGCTCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGGWMHRAGSCAS*GQLATQHLALPLSL Trigger: GAGCGAGAGCGGGAGCGCCAGATGTTGTGTCGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS GCA 90 bp | CGAGAGGGCAAGGCTGGTGCGGGATTGGTCCCGTTGGAGGCTGGATaGACCGGGCAGGATCCTGTGCCAGCTGCGGCCAGTTGGCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: REGKAGAGLVPLEAG*TGQDPVPAAASWRH Trigger: GTGTCGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTGGAAAGCCGCGGGATTGGTCCCGTaGGAGGCTGGATGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQVTCLPGGWASTTTWKAAGLVP*EAGCTG Trigger: CCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGC...GGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS GCA 90 bp | CGGGATTGGTCCCGTTGGAGGCTGGATGCACCGGGCAGGATCCTGTaGCAGCTGCGGCCAGTTGGCGACACAACATCTGGCGCTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RDWSRWRLDAPGRIL*QLRPVGDTTSGAPA Trigger: AGCGGGAGCGCCAGATGTTGTGTCGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTGGAAAGCCGCCAGCTGCGGCCAGTaGGCGACACAACATCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GQVTCLPGGWASTTTWKAASCGQ*ATQHLA Trigger: CGCCAGATGTTGTGTCGCCAACTGGCCGCAGCTGGC...GGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS-3UTR CAA 90 bp | GAGTTAACAAGAAGCAGGTGGCTATGGGCCGGGAGCCCAGCGAGCAGCGAAGACCGCCTCAGCGCGGAGTaGGTGAGGCGCAGAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ELTRSRWLWAGSPASSEDRLSAE*VRRREV Trigger: GACCTCTCTGCGCCTCACCAACTCCGCGCTGAGGCG...GTCTTCGCTGCTCGCTGGGCTCCCGGCCCATAGCCACCTGCTTCTTGTTAACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
||
| CDS TCA 90 bp | TCTCCGCCCTCAGTGTGGAGGCCTCGCGCCTCAGCGCGGAGTTGGTaGGGCGCAGAGAGGTCAGGGTGTCAACTACGTCATCCATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPPSVWRPRASARSW*GAERSGCQLRHPSE Trigger: CTCAGATGGATGACGTAGTTGACACCCTGACCTCTCTGCGCCTCACCAACTCCGCGCTGAGGCGCGAGGCCTCCACACTGAGGGCGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS-3UTR CAA 90 bp | GTCCGAGGAGCCAGGGCAGGTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACGGGGAAGCGGGAGGCTaGAAAAATCATGAACCTGTC | + |
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Preference number: 5 (lower is better) Translates to: VRGARAGDLPPRWMGLDNGEAGG*KNHEPV Trigger: GACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCC...GTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCACCTGCCCTGGCTCCTCGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS-3UTR CAA 90 bp | GAGTTAACAAGAAGCAGGTGGCTATGGGCCGGGAGCCCAGCGAGCAGCGAAGACAAGGCTGGTGCGGGATaGGTCCCGTTGGAGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ELTRSRWLWAGSPASSEDKAGAG*VPLEAG Trigger: TCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTT...GTCTTCGCTGCTCGCTGGGCTCCCGGCCCATAGCCACCTGCTTCTTGTTAACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 90 bp | TGCGCAGCAGAGTTAGTTCGGCCATCACACTCTCCAGCATGTTGGTaGGGTTGGCCTTCTCCGCCCTCAGTGTGGAGGCCTCGCGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: CAAELVRPSHSPACW*GWPSPPSVWRPRAS Trigger: TGAGGCGCGAGGCCTCCACACTGAGGGCGGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGTGATGGCCGAACTAACTCTGCTGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 90 bp | GGCGCAGAGAGGTCAGGGTGTCAACTACGTCATCCATCTGAGCGCTaGCACCAGGGGCAGAGGCTGGGCTTTCAGTTTTGGAGGTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: GAERSGCQLRHPSER*HQGQRLGFQFWRSE Trigger: CTCGGACCTCCAAAACTGAAAGCCCAGCCTCTGCCCCTGGTGCCAGCGCTCAGATGGATGACGTAGTTGACACCCTGACCTCTCTGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 90 bp | GACACAACATCTGGCGCTCCCGCTCTCGCTCCCGCACAGCCCTATTaGACGCGGATGTCTTCCGGATTTGTGCTCGCCTTGAGTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: DTTSGAPALAPAQPY*TRMSSGFVLALSAS Trigger: TGAGGCACTCAAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAATAGGGCTGTGCGGGAGCGAGAGCGGGAGCGCCAGATGTTGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 90 bp | CACAGCCCTATTGGACGCGGATGTCTTCCGGATTTGTGCTCGCCTTaGGTGCCTCAGCGGGGACTTGTAGGTTCTGCGGAGCTCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: HSPIGRGCLPDLCSP*VPQRGLVGSAELSQ Trigger: CTGGCTGAGCTCCGCAGAACCTACAAGTCCCCGCTGAGGCACTCAAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAATAGGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS-3UTR CAA 90 bp | CCTAAATGGTTCCTGGGCAGGCACATGCCCAAGGGGCTGTGTTGTGATTGCTGGTCCCGCACAGCCCTATaGGACGCGGATGTCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: PKWFLGRHMPKGLCCDCWSRTAL*DADVFR Trigger: CCGGAAGACATCCGCGTCCAATAGGGCTGTGCGGGA...CCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAACCATTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 90 bp | CCTGGTAATTGTTTCGCAAAGGGCTGTCTGGTTGCATGTGGGGGATaGCCCACTTCTCCGCCTCCCCAGTCAGACGGGATACCAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: PGNCFAKGCLVACGG*PTSPPPQSDGIPGR Trigger: CCTTCCTGGTATCCCGTCTGACTGGGGAGGCGGAGAAGTGGGCCATCCCCCACATGCAACCAGACAGCCCTTTGCGAAACAATTACCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS-3UTR CAA 90 bp | GTGACCTGCCTCCCCGGTGGATGGGCCTCGACAACAACGTGGAAAGCCACAAAGACACTCTCCAGCATGTaGGTGAGGTTGGCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VTCLPGGWASTTTWKATKTLSSM*VRLAFS Trigger: GGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGT...CTTTGTGGCTTTCCACGTTGTTGTCGAGGCCCATCCACCGGGGAGGCAGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS-3UTR CAA 90 bp | CCTAAATGGTTCCTGGGCAGGCACATGCCCAAGGGGCTGTGTTGTGATTGCTGGAGCATGTTGGTGAGGTaGGCCTTCTCCGCCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: PKWFLGRHMPKGLCCDCWSMLVR*AFSALS Trigger: ACTGAGGGCGGAGAAGGCCAACCTCACCAACATGCT...CCAGCAATCACAACACAGCCCCTTGGGCATGTGCCTGCCCAGGAACCATTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 90 bp | CCACTCTCTCGGCTTCACCGGGGAAGCGGGAGGCTTGAAAAATCATaGACCTGTCCATCTGCATCAGGAACCCTGCCAACTGTCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PLSRLHRGSGRLEKS*TCPSASGTLPTVQG Trigger: ACCCTGGACAGTTGGCAGGGTTCCTGATGCAGATGGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCCGGTGAAGCCGAGAGAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 90 bp | ACCAGGAAGGCCACTCTCTCGGCTTCACCGGGGAAGCGGGAGGCTTaGAAAATCATGAACCTGTCCATCTGCATCAGGAACCCTGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: TRKATLSASPGKREA*KIMNLSICIRNPAN Trigger: GTTGGCAGGGTTCCTGATGCAGATGGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCCGGTGAAGCCGAGAGAGTGGCCTTCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS GCA 90 bp | GGATTTGTGCTCGCCTTGAGTGCCTCAGCGGGGACTTGTAGGTTCTaGGGAGCTCAGCCAGAAACCCCTGGTAATTGTTTCGCAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GFVLALSASAGTCRF*GAQPETPGNCFAKG Trigger: GCCCTTTGCGAAACAATTACCAGGGGTTTCTGGCTGAGCTCCGCAGAACCTACAAGTCCCCGCTGAGGCACTCAAGGCGAGCACAAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS-3UTR CAA 90 bp | TTCAGTGAGGCTGCTAGGCTAACAGAGTTAACAAGAAGCAGGTGGCTATGGGCCCAAAGGGCTGTCTGGTaGCATGTGGGGGATGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: FSEAARLTELTRSRWLWAQRAVW*HVGDGP Trigger: TGGGCCATCCCCCACATGCAACCAGACAGCCCTTTG...GGCCCATAGCCACCTGCTTCTTGTTAACTCTGTTAGCCTAGCAGCCTCACTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS-3UTR CAA 90 bp | TTCAGTGAGGCTGCTAGGCTAACAGAGTTAACAAGAAGCAGGTGGCTATGGGCCGGATTTGTGCTCGCCTaGAGTGCCTCAGCGGGGACT | + |
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Preference number: 5 (lower is better) Translates to: FSEAARLTELTRSRWLWAGFVLA*SASAGT Trigger: AGTCCCCGCTGAGGCACTCAAGGCGAGCACAAATCC...GGCCCATAGCCACCTGCTTCTTGTTAACTCTGTTAGCCTAGCAGCCTCACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 90 bp | AGGTTCCGGCCACGAGAGGGCAAGGCTGGTGCGGGATTGGTCCCGTaGGAGGCTGGATGCACCGGGCAGGATCCTGTGCCAGCTGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RFRPREGKAGAGLVP*EAGCTGQDPVPAAA Trigger: GGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCTCGTGGCCGGAACCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS GCA 72 bp | GGAGGCTGGATGCACCGGGCAGGATCCTGTGCCAGCTaGGGCCAGTTGGCGACACAACATCTGGCGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: GGWMHRAGSCAS*GQLATQHLALP Trigger: CGGGAGCGCCAGATGTTGTGTCGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 72 bp | TGCACCGGGCAGGATCCTGTGCCAGCTGCGGCCAGTTaGCGACACAACATCTGGCGCTCCCGCTCTCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CTGQDPVPAAAS*RHNIWRSRSRS Trigger: GGAGCGAGAGCGGGAGCGCCAGATGTTGTGTCGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 72 bp | GGTTCCGGCCACGAGAGGGCAAGGCTGGTGCGGGATTaGTCCCGTTGGAGGCTGGATGCACCGGGCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: GSGHERARLVRD*SRWRLDAPGRI Trigger: GATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCTCGTGGCCGGAACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 72 bp | CACGAGAGGGCAAGGCTGGTGCGGGATTGGTCCCGTTaGAGGCTGGATGCACCGGGCAGGATCCTGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HERARLVRDWSR*RLDAPGRILCQ Trigger: CTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCTCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | CCACGAGAGGGCAAGGCTGGTGCGGGATTGGTCCCGTaGGAGGCTGGATGCACCGGGCAGGATCCTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PREGKAGAGLVP*EAGCTGQDPVP Trigger: TGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCTCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | AGGTTCCGGCCACGAGAGGGCAAGGCTGGTGCGGGATaGGTCCCGTTGGAGGCTGGATGCACCGGGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RFRPREGKAGAG*VPLEAGCTGQD Trigger: ATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCACCAGCCTTGCCCTCTCGTGGCCGGAACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS GCA 72 bp | TCCCGTTGGAGGCTGGATGCACCGGGCAGGATCCTGTaGCAGCTGCGGCCAGTTGGCGACACAACATCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRWRLDAPGRIL*QLRPVGDTTSG Trigger: GCCAGATGTTGTGTCGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 72 bp | TCTGGCGCTCCCGCTCTCGCTCCCGCACAGCCCTATTaGACGCGGATGTCTTCCGGATTTGTGCTCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SGAPALAPAQPY*TRMSSGFVLAL Trigger: CAAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAATAGGGCTGTGCGGGAGCGAGAGCGGGAGCGCCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 90 bp | CGGGTGCGCAGCAGAGTTAGTTCGGCCATCACACTCTCCAGCATGTaGGTGAGGTTGGCCTTCTCCGCCCTCAGTGTGGAGGCCTCGCGC | + |
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Preference number: 6 (lower is better) Translates to: RVRSRVSSAITLSSM*VRLAFSALSVEASR Trigger: GCGCGAGGCCTCCACACTGAGGGCGGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGTGATGGCCGAACTAACTCTGCTGCGCACCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 90 bp | AGCAGAGTTAGTTCGGCCATCACACTCTCCAGCATGTTGGTGAGGTaGGCCTTCTCCGCCCTCAGTGTGGAGGCCTCGCGCCTCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: SRVSSAITLSSMLVR*AFSALSVEASRLSA Trigger: CGCGCTGAGGCGCGAGGCCTCCACACTGAGGGCGGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGTGATGGCCGAACTAACTCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 90 bp | CGACACAACATCTGGCGCTCCCGCTCTCGCTCCCGCACAGCCCTATaGGACGCGGATGTCTTCCGGATTTGTGCTCGCCTTGAGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RHNIWRSRSRSRTAL*DADVFRICARLECL Trigger: GAGGCACTCAAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAATAGGGCTGTGCGGGAGCGAGAGCGGGAGCGCCAGATGTTGTGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 72 bp | TCAGTGTGGAGGCCTCGCGCCTCAGCGCGGAGTTGGTaGGGCGCAGAGAGGTCAGGGTGTCAACTACGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SVWRPRASARSW*GAERSGCQLRH Trigger: ATGACGTAGTTGACACCCTGACCTCTCTGCGCCTCACCAACTCCGCGCTGAGGCGCGAGGCCTCCACACTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | AGTTCGGCCATCACACTCTCCAGCATGTTGGTGAGGTaGGCCTTCTCCGCCCTCAGTGTGGAGGCCTCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SSAITLSSMLVR*AFSALSVEASR Trigger: GCGCGAGGCCTCCACACTGAGGGCGGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGTGATGGCCGAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | ATCTGGCGCTCCCGCTCTCGCTCCCGCACAGCCCTATaGGACGCGGATGTCTTCCGGATTTGTGCTCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: IWRSRSRSRTAL*DADVFRICARL Trigger: AAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAATAGGGCTGTGCGGGAGCGAGAGCGGGAGCGCCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 90 bp | GCACAGCCCTATTGGACGCGGATGTCTTCCGGATTTGTGCTCGCCTaGAGTGCCTCAGCGGGGACTTGTAGGTTCTGCGGAGCTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AQPYWTRMSSGFVLA*SASAGTCRFCGAQP Trigger: TGGCTGAGCTCCGCAGAACCTACAAGTCCCCGCTGAGGCACTCAAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAATAGGGCTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 90 bp | GGTTCAGGCAGTGAGGTGGGTGGCGTGGTCATGGGTCGGGTCCCATaGGAGGTGATGGCAGAGATAGGTGGAGTAATCTGTAGAGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSGSEVGGVVMGRVP*EVMAEIGGVICRAP Trigger: TGGCGCTCTACAGATTACTCCACCTATCTCTGCCATCACCTCCAATGGGACCCGACCCATGACCACGCCACCCACCTCACTGCCTGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 72 bp | GAGTTAGTTCGGCCATCACACTCTCCAGCATGTTGGTaGGGTTGGCCTTCTCCGCCCTCAGTGTGGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ELVRPSHSPACW*GWPSPPSVWRP Trigger: AGGCCTCCACACTGAGGGCGGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGTGATGGCCGAACTAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 72 bp | ATTGGACGCGGATGTCTTCCGGATTTGTGCTCGCCTTaGGTGCCTCAGCGGGGACTTGTAGGTTCTGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: IGRGCLPDLCSP*VPQRGLVGSAE Trigger: CTCCGCAGAACCTACAAGTCCCCGCTGAGGCACTCAAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 72 bp | AGGTCAGGGTGTCAACTACGTCATCCATCTGAGCGCTaGCACCAGGGGCAGAGGCTGGGCTTTCAGTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RSGCQLRHPSER*HQGQRLGFQFW Trigger: CCAAAACTGAAAGCCCAGCCTCTGCCCCTGGTGCCAGCGCTCAGATGGATGACGTAGTTGACACCCTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | AAACCCCTGGTAATTGTTTCGCAAAGGGCTGTCTGGTaGCATGTGGGGGATGGCCCACTTCTCCGCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: KPLVIVSQRAVW*HVGDGPLLRLP Trigger: GGGGAGGCGGAGAAGTGGGCCATCCCCCACATGCAACCAGACAGCCCTTTGCGAAACAATTACCAGGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS GCA 72 bp | CTCGCCTTGAGTGCCTCAGCGGGGACTTGTAGGTTCTaGGGAGCTCAGCCAGAAACCCCTGGTAATTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LALSASAGTCRF*GAQPETPGNCF Trigger: GAAACAATTACCAGGGGTTTCTGGCTGAGCTCCGCAGAACCTACAAGTCCCCGCTGAGGCACTCAAGGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CCA 72 bp | CAGAAACCCCTGGTAATTGTTTCGCAAAGGGCTGTCTaGTTGCATGTGGGGGATGGCCCACTTCTCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QKPLVIVSQRAV*LHVGDGPLLRL Trigger: GAGGCGGAGAAGTGGGCCATCCCCCACATGCAACCAGACAGCCCTTTGCGAAACAATTACCAGGGGTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | AGCAGAGTTAGTTCGGCCATCACACTCTCCAGCATGTaGGTGAGGTTGGCCTTCTCCGCCCTCAGTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRVSSAITLSSM*VRLAFSALSVE Trigger: CTCCACACTGAGGGCGGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGTGATGGCCGAACTAACTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | AGTGAGGTGGGTGGCGTGGTCATGGGTCGGGTCCCATaGGAGGTGATGGCAGAGATAGGTGGAGTAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SEVGGVVMGRVP*EVMAEIGGVIC Trigger: ACAGATTACTCCACCTATCTCTGCCATCACCTCCAATGGGACCCGACCCATGACCACGCCACCCACCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | TATTGGACGCGGATGTCTTCCGGATTTGTGCTCGCCTaGAGTGCCTCAGCGGGGACTTGTAGGTTCTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: YWTRMSSGFVLA*SASAGTCRFCG Trigger: TCCGCAGAACCTACAAGTCCCCGCTGAGGCACTCAAGGCGAGCACAAATCCGGAAGACATCCGCGTCCAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 90 bp | TACCAGGAAGGCCACTCTCTCGGCTTCACCGGGGAAGCGGGAGGCTaGAAAAATCATGAACCTGTCCATCTGCATCAGGAACCCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YQEGHSLGFTGEAGG*KNHEPVHLHQEPCQ Trigger: TTGGCAGGGTTCCTGATGCAGATGGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCCGGTGAAGCCGAGAGAGTGGCCTTCCTGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 72 bp | CGGCTTCACCGGGGAAGCGGGAGGCTTGAAAAATCATaGACCTGTCCATCTGCATCAGGAACCCTGCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RLHRGSGRLEKS*TCPSASGTLPT Trigger: AGTTGGCAGGGTTCCTGATGCAGATGGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCCGGTGAAGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS TCA 72 bp | GCCACTCTCTCGGCTTCACCGGGGAAGCGGGAGGCTTaGAAAATCATGAACCTGTCCATCTGCATCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ATLSASPGKREA*KIMNLSICIRN Trigger: GTTCCTGATGCAGATGGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCCGGTGAAGCCGAGAGAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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| CDS CAA 72 bp | GGCCACTCTCTCGGCTTCACCGGGGAAGCGGGAGGCTaGAAAAATCATGAACCTGTCCATCTGCATCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GHSLGFTGEAGG*KNHEPVHLHQE Trigger: TTCCTGATGCAGATGGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCCGGTGAAGCCGAGAGAGTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069476.5 |
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