Pregenerated sensors for RTL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047686Ensembl transcript IDs: ENSMUST00000062010.10
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTCGAAGAACCACAGAGCGGTCGATGCTGTTTCTGTAGGAGCCTaGATCCACCATTGCTTGCTCAAAGAATTGCCGTCTTCCAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LSKNHRAVDAVSVGA*IHHCLLKELPSSKP Trigger: AGGCTTGGAAGACGGCAATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCGACCGCTCTGTGGTTCTTCGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR TCA 90 bp | CCACCTGTGCCTGAAGCAATTGTAATGACAGTAATGCGATGGAAATaGCACAGTTCGGGTACTCCATTCGATGTTTGGGTCATGGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: PPVPEAIVMTVMRWK*HSSGTPFDVWVMGL Trigger: GAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATTACTGTCATTACAATTGCTTCAGGCACAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR GCA 90 bp | TATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGAGCGGTCGATaGTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: YCGLVSSLEEPQSGR*CFCRSLNPPLLAQR Trigger: TCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCGACCGCTCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 90 bp | GTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTAGCGTaGTGCATGAATAATGTCAAACTGGAGCTCTTCAACGTGGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: VMGLKPMDSKNQRVA*CMNNVKLELFNVVS Trigger: GGAAACCACGTTGAAGAGCTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 90 bp | CCCATCGACCGTTTCAAGCATAAGAGGGAAGATATTATTGCGGATTaGTATCTTCTCTCGAAGAACCACAGAGCGGTCGATGCTGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: PIDRFKHKREDIIAD*YLLSKNHRAVDAVS Trigger: AGAAACAGCATCGACCGCTCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATGCTTGAAACGGTCGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 90 bp | AGAGAGCAGCAAATGCTGATGACAGCTGAGGTAACAGAAGACAGATaGCCAGAAGTCACTAGGACCCACCATCTAACCAGCAATTATTTC | + |
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Preference number: 1 (lower is better) Translates to: REQQMLMTAEVTEDR*PEVTRTHHLTSNYF Trigger: GAAATAATTGCTGGTTAGATGGTGGGTCCTAGTGACTTCTGGCCATCTGTCTTCTGTTACCTCAGCTGTCATCAGCATTTGCTGCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR GCA 90 bp | ATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTAGCGTGGTaGATGAATAATGTCAAACTGGAGCTCTTCAACGTGGTTTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: MGLKPMDSKNQRVAW*MNNVKLELFNVVSN Trigger: ATTGGAAACCACGTTGAAGAGCTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR TCA 90 bp | AACCAGCAATTATTTCATCACGCCGTCTTCGATTCCACCTGTGCCTaGAGCAATTGTAATGACAGTAATGCGATGGAAATGACACAGTTC | + |
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Preference number: 1 (lower is better) Translates to: NQQLFHHAVFDSTCA*SNCNDSNAMEMTQF Trigger: GAACTGTGTCATTTCCATCGCATTACTGTCATTACAATTGCTTCAGGCACAGGTGGAATCGAAGACGGCGTGATGAAATAATTGCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CAA 90 bp | AGCGGACGCCCATCGACCGTTTCAAGCATAAGAGGGAAGATATTATaGCGGATTGGTATCTTCTCTCGAAGAACCACAGAGCGGTCGATG | + |
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Preference number: 2 (lower is better) Translates to: SGRPSTVSSIRGKIL*RIGIFSRRTTERSM Trigger: CATCGACCGCTCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATGCTTGAAACGGTCGATGGGCGTCCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGAGGTAACAGAAGACAGATGGCCAGAAGTCACTAGGACCCACCATCTAGTTTCTGTAGGAGCCTaGATCCACCATTGCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TAEVTEDRWPEVTRTHHLVSVGA*IHHCLL Trigger: GAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAAC...TAGATGGTGGGTCCTAGTGACTTCTGGCCATCTGTCTTCTGTTACCTCAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCGTTGTACAGGTAGCTGGGTCTCAAGCCAATaGATTCCAAGAATCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KVVRFSPSSKRQRRCTGSWVSSQ*IPRIRG Trigger: CCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCA...GCTACCTGTACAACGACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGAGGTAACAGAAGACAGATGGCCAGAAGTCACTAGGACCCACCATCTAGTAATGCGATGGAAATaGCACAGTTCGGGTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: TAEVTEDRWPEVTRTHHLVMRWK*HSSGTP Trigger: TGGAGTACCCGAACTGTGTCATTTCCATCGCATTAC...TAGATGGTGGGTCCTAGTGACTTCTGGCCATCTGTCTTCTGTTACCTCAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCTACATAATGCAGGGCTCAAAGAGGGAGGCATGCAAGGTTGGTGAGGAAAATCAGAGGGTAGCGTaGTGCATGAATAATGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: QPYIMQGSKREACKVGEENQRVA*CMNNVK Trigger: TTTGACATTATTCATGCACCACGCTACCCTCTGATT...TTCCTCACCAACCTTGCATGCCTCCCTCTTTGAGCCCTGCATTATGTAGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CAA 90 bp | AGTAATGCGATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTaGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SNAMEMTQFGYSIRC*GHGSQANGFQESEG Trigger: ACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CAA 90 bp | TCTTCAACGTGGTTTCCAATTTTTACTTCAACAGGTGGGGTTTCTTaGGTAATGGGTCCATTAATCAGCGGACGCCCATCGACCGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SSTWFPIFTSTGGVS*VMGPLISGRPSTVS Trigger: TGAAACGGTCGATGGGCGTCCGCTGATTAATGGACCCATTACCAAAGAAACCCCACCTGTTGAAGTAAAAATTGGAAACCACGTTGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR GCA 90 bp | TACTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGCTTGCTCAAAGAATTaGCGTCTTCCAAGCCTAATC | + |
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Preference number: 2 (lower is better) Translates to: YSIRCLGHGSQANGFQESACSKN*RLPSLI Trigger: GATTAGGCTTGGAAGACGGCAATTCTTTGAGCAAGC...TGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTCGATTCCACCTGTGCCTGAAGCAATTGTAATGACAGTAATGCGATGGAAATCGATGTTTGGGTCATaGGTCTCAAGCCAATGGATT | + |
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Preference number: 2 (lower is better) Translates to: SSIPPVPEAIVMTVMRWKSMFGS*VSSQWI Trigger: AATCCATTGGCTTGAGACCCATGACCCAAACATCGA...TTTCCATCGCATTACTGTCATTACAATTGCTTCAGGCACAGGTGGAATCGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR GCA 90 bp | ATGGATTCCAAGAATCAGAGGGTAGCGTGGTGCATGAATAATGTCAAACTGGAGGAGGGAAGATATTATTaGGGATTGGTATCTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: MDSKNQRVAWCMNNVKLEEGRYY*GLVSSL Trigger: GAGAGAAGATACCAATCCGCAATAATATCTTCCCTC...CTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CCA 90 bp | ATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTGATATTATTGCGGATTaGTATCTTCTCTCGAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: IRCLGHGSQANGFQESEGDIIAD*YLLSKN Trigger: GTTCTTCGAGAGAAGATACCAATCCGCAATAATATC...ACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR GCA 90 bp | CATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGAGAATCCACCATTGCTTaGTCAAAGAATTGCCGTCTT | + |
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Preference number: 2 (lower is better) Translates to: HKREDIIADWYLLSKNHRESTIA*SKNCRL Trigger: AAGACGGCAATTCTTTGAGCAAGCAATGGTGGATTC...TCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CAA 90 bp | TACTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAACGCGTATTTGTAGATaGGCCCGCCCGGGATCCCCC | + |
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Preference number: 3 (lower is better) Translates to: YSIRCLGHGSQANGFQESTRICR*ARPGSP Trigger: GGGGGATCCCGGGCGGGCCAATCTACAAATACGCGT...TGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR TCA 72 bp | AACCACAGAGCGGTCGATGCTGTTTCTGTAGGAGCCTaGATCCACCATTGCTTGCTCAAAGAATTGCCGTCT | + |
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Preference number: 3 (lower is better) Translates to: NHRAVDAVSVGA*IHHCLLKELPS Trigger: AGACGGCAATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCGACCGCTCTGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 72 bp | GACACAGTTCGGGTACTCCATTCGATGTTTGGGTCATaGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: DTVRVLHSMFGS*VSSQWIPRIRG Trigger: CCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 72 bp | CAAATGCTGATGACAGCTGAGGTAACAGAAGACAGATaGCCAGAAGTCACTAGGACCCACCATCTAACCAGC | + |
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Preference number: 3 (lower is better) Translates to: QMLMTAEVTEDR*PEVTRTHHLTS Trigger: GCTGGTTAGATGGTGGGTCCTAGTGACTTCTGGCCATCTGTCTTCTGTTACCTCAGCTGTCATCAGCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTTTGGTAATGGGTCCATTAATCAGCGGACGCCCATCGACCGTTTCAAGCAGCCTGAATCCACCATaGCTTGCTCAAAGAATTGCC | + |
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Preference number: 3 (lower is better) Translates to: VSLVMGPLISGRPSTVSSSLNPP*LAQRIA Trigger: GGCAATTCTTTGAGCAAGCAATGGTGGATTCAGGCT...GCTTGAAACGGTCGATGGGCGTCCGCTGATTAATGGACCCATTACCAAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CAA 90 bp | CTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAACAGGTGGGGTTTCTTaGGTAATGGGTCCATTAATC | + |
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Preference number: 3 (lower is better) Translates to: LHSMFGSWVSSQWIPRIRTGGVS*VMGPLI Trigger: GATTAATGGACCCATTACCAAAGAAACCCCACCTGT...TCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR GCA 72 bp | AAGCCAATGGATTCCAAGAATCAGAGGGTAGCGTGGTaGATGAATAATGTCAAACTGGAGCTCTTCAACGTG | + |
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Preference number: 3 (lower is better) Translates to: KPMDSKNQRVAW*MNNVKLELFNV Trigger: CACGTTGAAGAGCTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCATTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 72 bp | CTCAAGCCAATGGATTCCAAGAATCAGAGGGTAGCGTaGTGCATGAATAATGTCAAACTGGAGCTCTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: LKPMDSKNQRVA*CMNNVKLELFN Trigger: GTTGAAGAGCTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCATTGGCTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR TCA 72 bp | CCTGAAGCAATTGTAATGACAGTAATGCGATGGAAATaGCACAGTTCGGGTACTCCATTCGATGTTTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: PEAIVMTVMRWK*HSSGTPFDVWV Trigger: GACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATTACTGTCATTACAATTGCTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 72 bp | CGTTTCAAGCATAAGAGGGAAGATATTATTGCGGATTaGTATCTTCTCTCGAAGAACCACAGAGCGGTCGAT | + |
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Preference number: 3 (lower is better) Translates to: RFKHKREDIIAD*YLLSKNHRAVD Trigger: ATCGACCGCTCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATGCTTGAAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR TCA 72 bp | TTATTTCATCACGCCGTCTTCGATTCCACCTGTGCCTaGAGCAATTGTAATGACAGTAATGCGATGGAAATG | + |
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Preference number: 3 (lower is better) Translates to: LFHHAVFDSTCA*SNCNDSNAMEM Trigger: CATTTCCATCGCATTACTGTCATTACAATTGCTTCAGGCACAGGTGGAATCGAAGACGGCGTGATGAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR CCA 72 bp | CTCTTCAACGTGGTTTCCAATTTTTACTTCAACAGGTaGGGTTTCTTTGGTAATGGGTCCATTAATCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: LFNVVSNFYFNR*GFFGNGSINQR Trigger: CCGCTGATTAATGGACCCATTACCAAAGAAACCCCACCTGTTGAAGTAAAAATTGGAAACCACGTTGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CAA 90 bp | GTCACTAGGACCCACCATCTAACCAGCAATTATTTCATCACGCCGTCTTCGATTAGATATTATTGCGGATaGGTATCTTCTCTCGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: VTRTHHLTSNYFITPSSIRYYCG*VSSLEE Trigger: TTCTTCGAGAGAAGATACCAATCCGCAATAATATCT...AATCGAAGACGGCGTGATGAAATAATTGCTGGTTAGATGGTGGGTCCTAGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| 3UTR-3UTR CAA 90 bp | AATTGTAATGACAGTAATGCGATGGAAATGACACAGTTCGGGTACTCCATTCGAAGAGGGAAGATATTATaGCGGATTGGTATCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: NCNDSNAMEMTQFGYSIRRGKIL*RIGIFS Trigger: AGAGAAGATACCAATCCGCAATAATATCTTCCCTCT...TCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATTACTGTCATTACAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | CAGCCCTACATAATGCAGGGCTCAAAGAGGGAGGCATGCAAGGTTGGTGAGGAAGTCTCTGGGGGCTCCTaGGGCTCCTTGATCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QPYIMQGSKREACKVGEEVSGGS*GSLISG Trigger: CCCAGAGATCAAGGAGCCCCAGGAGCCCCCAGAGAC...TTCCTCACCAACCTTGCATGCCTCCCTCTTTGAGCCCTGCATTATGTAGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | AGCGTCGTTGTACAGGTAGCCTTCGTTCATAGCCAGAGGTTCAGTGAAAGATTCGGGTCCAGGGGCTCCTaGGGCACCCGAGGCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SVVVQVAFVHSQRFSERFGSRGS*GTRGSR Trigger: TCTGGAGCCTCGGGTGCCCCAGGAGCCCCTGGACCC...GAATCTTTCACTGAACCTCTGGCTATGAACGAAGGCTACCTGTACAACGACGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR TCA 90 bp | TTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTAGCGTGGTGAAACTCCTCGGCATCTaGGGGGTCCAGGGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGHGSQANGFQESEGSVVKLLGI*GVQGLL Trigger: CAGGAGCCCCTGGACCCCTCAGATGCCGAGGAGTTT...CACCACGCTACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR TCA 90 bp | AGGAAAAGCAGCTCAAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCCCCGTTCAGCCTCGCTaGGGTGGGGGCGATTACTTG | + |
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Preference number: 4 (lower is better) Translates to: RKSSSKSSGSVHHPRGSVPVQPR*GGGDYL Trigger: CAAGTAATCGCCCCCACCTCAGCGAGGCTGAACGGG...GACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTTGAGCTGCTTTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | AATGCGATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTTGGGTCATGGGGCTCCCCGGGCTCTGTaGTTGCTGGGGGTTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NAMEMTQFGYSIRCLGHGAPRAL*LLGVPR Trigger: CCTGGGAACCCCCAGCAACCACAGAGCCCGGGGAGC...CCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | AGGAAAAGCAGCTCAAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCGTGGCTTCCAGGCTGTaGAATCCAGGGCCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKSSSKSSGSVHHPRGSVVASRL*NPGPLG Trigger: CCCCAGAGGCCCTGGATTCCACAGCCTGGAAGCCAC...GACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTTGAGCTGCTTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR TCA 90 bp | TTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTAGCGTGGTGGCCTGCTGGACACGATaGGGCTTGACAGGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGHGSQANGFQESEGSVVACWTR*GLTGQS Trigger: AGACTGCCCTGTCAAGCCTCATCGTGTCCAGCAGGC...CACCACGCTACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | AGGAAAAGCAGCTCAAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCGGTTCTGTGACTCCCTaGCTGCTGGGAACTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKSSSKSSGSVHHPRGSVGSVTP*LLGTLG Trigger: CCCCAGAGTTCCCAGCAGCCAGGGAGTCACAGAACC...GACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTTGAGCTGCTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | AGGAAAAGCAGCTCAAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCGGAATCCAGGGCCTCTaGGGGCTCCCAGGATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RKSSSKSSGSVHHPRGSVGIQGL*GLPGFL Trigger: AAGGAATCCTGGGAGCCCCCAGAGGCCCTGGATTCC...GACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTTGAGCTGCTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | TACTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCACCCCTTGGGGACGCCTaGGGCCTCTGGGTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: YSIRCLGHGSQANGFQESPLGDA*GLWVAG Trigger: CCCAGCAACCCAGAGGCCCCAGGCGTCCCCAAGGGG...TGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | AAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCGTTGTACAGGTAGCGGCTCCAGAGTCTCCTaGGGAGGTGGATGCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KVVRFSPSSKRQRRCTGSGSRVS*GGGCSR Trigger: CCTTGAGCATCCACCTCCCCAGGAGACTCTGGAGCC...GCTACCTGTACAACGACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR TCA 90 bp | AAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCGTTGTACAGGTAGCGGACACGATGAGGCTTaGCAGGGCAGTCTCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: KVVRFSPSSKRQRRCTGSGHDEA*QGSLWQ Trigger: TTGCCAGAGACTGCCCTGTCAAGCCTCATCGTGTCC...GCTACCTGTACAACGACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR CCA 90 bp | AATCAGCGGACGCCCATCGACCGTTTCAAGCATAAGAGGGAAGATATTATTGCGGGGCTCTGTGGTTGCTaGGGGTTCCCAGGGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: NQRTPIDRFKHKREDIIAGLCGC*GFPGVL Trigger: CAGAACCCCTGGGAACCCCCAGCAACCACAGAGCCC...CGCAATAATATCTTCCCTCTTATGCTTGAAACGGTCGATGGGCGTCCGCTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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| CDS-3UTR TCA 90 bp | CTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGTTCCCTGGGCTCTCTaGTCTTTGTGGGCTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSMFGSWVSSQWIPRIRVPWAL*SLWAPR Trigger: CCGGGGAGCCCACAAAGATCAGAGAGCCCAGGGAAC...TCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCTGAGGTAACAGAAGACAGATGGCCAGAAGTCACTAGGACCCACCATCTATCTCCTGGGATTCCTTaGCTGCTGGTGGCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAEVTEDRWPEVTRTHHLSPGIP*LLVASR Trigger: CCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGA...TAGATGGTGGGTCCTAGTGACTTCTGGCCATCTGTCTTCTGTTACCTCAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | AGCGTCGTTGTACAGGTAGCCTTCGTTCATAGCCAGAGGTTCAGTGAAAGATTCTGGAGCTGTGGACTCTaGAGCTCCTTGAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVVQVAFVHSQRFSERFWSCGL*SSLRAG Trigger: CCCAGCCCTCAAGGAGCTTCAGAGTCCACAGCTCCA...GAATCTTTCACTGAACCTCTGGCTATGAACGAAGGCTACCTGTACAACGACGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | AGGAAAAGCAGCTCAAAGTCGTCAGGTTCAGTCCATCATCCAAGAGGCAGCGTCCCTTCCCGCCTCACCTaGGAAGAAGCTGCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKSSSKSSGSVHHPRGSVPSRLT*EEAANK Trigger: TTTGTTGGCAGCTTCTTCTCAGGTGAGGCGGGAAGG...GACGCTGCCTCTTGGATGATGGACTGAACCTGACGACTTTGAGCTGCTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR GCA 90 bp | TACTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCACCCGGGCTCTGTGGTTaGTGGGGGTTCCCAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSIRCLGHGSQANGFQESPGLCG*WGFPGV Trigger: AACCCCTGGGAACCCCCAGCAACCACAGAGCCCGGG...TGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTAGCGTGGTGACTGCTCCGGATTTCTaGAGCTCTGGTATCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGHGSQANGFQESEGSVVTAPDF*SSGIWA Trigger: GGCCCAGATACCAGAGCTCCAGAAATCCGGAGCAGT...CACCACGCTACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | GGTCGATGCTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGAATTTCCCCTTGGCGAAGTTaGGGGAGGCCCTGGTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRCCFCRSLNPPLLAQRISPWRS*GRPWLA Trigger: TGCTAACCAGGGCCTCCCTCAACTTCGCCAAGGGGA...AATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR GCA 90 bp | ATGGATTCCAAGAATCAGAGGGTAGCGTGGTGCATGAATAATGTCAAACTGGAGCTGGGGCCTCTGGGTTaGTGGGGACTCCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MDSKNQRVAWCMNNVKLELGPLG*WGLQSL Trigger: AAGGCTCTGGAGTCCCCAGCAACCCAGAGGCCCCAG...CTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | CGATGCTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGAATTGCCGGGCTCCTTGATCTCTaGGGGTTCCCTGAGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RCCFCRSLNPPLLAQRIAGLLDL*GFPELT Trigger: AGTGAGCTCAGGGAACCCCCAGAGATCAAGGAGCCC...GGCAATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | ATGGATTCCAAGAATCAGAGGGTAGCGTGGTGCATGAATAATGTCAAACTGGAGGACTCTGAAGCTCCTTaGGGGCTGGGGTACCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MDSKNQRVAWCMNNVKLEDSEAP*GLGYPG Trigger: ACCAGGGTACCCCAGCCCTCAAGGAGCTTCAGAGTC...CTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGAATTGCCGTCCTCCGCCTCACAGACTaGTGGGAGATCATAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCFCRSLNPPLLAQRIAVLRLTD*WEIITP Trigger: AGGGGTTATGATCTCCCAGCAGTCTGTGAGGCGGAG...GACGGCAATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | AGCGTCGTTGTACAGGTAGCCTTCGTTCATAGCCAGAGGTTCAGTGAAAGATTCTGGAGCTCTGGTATCTaGGCCTGGAGGGCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SVVVQVAFVHSQRFSERFWSSGI*AWRAAF Trigger: AAATGCTGCCCTCCAGGCCCAGATACCAGAGCTCCA...GAATCTTTCACTGAACCTCTGGCTATGAACGAAGGCTACCTGTACAACGACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | ATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTGGATTTCTGGAGCTCTaGTATCTGGGCCTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRCLGHGSQANGFQESEGGFLEL*YLGLEG Trigger: GCCCTCCAGGCCCAGATACCAGAGCTCCAGAAATCC...ACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | AATCAGCGGACGCCCATCGACCGTTTCAAGCATAAGAGGGAAGATATTATTGCGGGGCTCCTTGATCTCTaGGGATCCCCTGAACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NQRTPIDRFKHKREDIIAGLLDL*GSPELC Trigger: ACAGAGTTCAGGGGATCCCCAGAGATCAAGGAGCCC...CGCAATAATATCTTCCCTCTTATGCTTGAAACGGTCGATGGGCGTCCGCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTACATAATGCAGGGCTCAAAGAGGGAGGCATGCAAGGTTGGTGAGGAATTGTCAAAAGTATCTTaGAGCGCTCGCAGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPYIMQGSKREACKVGEELSKVS*SARRSL Trigger: AAGGCTCCTGCGAGCGCTCCAAGATACTTTTGACAA...TTCCTCACCAACCTTGCATGCCTCCCTCTTTGAGCCCTGCATTATGTAGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | GTTTCTTTGGTAATGGGTCCATTAATCAGCGGACGCCCATCGACCGTTTCAAGCGTGGTTCATGCTCTTTaGCTGCTCCGGATTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSLVMGPLISGRPSTVSSVVHAL*LLRISG Trigger: TCCAGAAATCCGGAGCAGTCAAAGAGCATGAACCAC...GCTTGAAACGGTCGATGGGCGTCCGCTGATTAATGGACCCATTACCAAAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | CTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAATTCTCCAGACTCATTaGTCTCTGGGGGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSMFGSWVSSQWIPRIRILQTH*SLGAPG Trigger: CCCAGGAGCCCCCAGAGACCAATGAGTCTGGAGAAT...TCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGAATTGCCGTCCAGTGGGATACCCTCTaGTTCTCAGGTAACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CCFCRSLNPPLLAQRIAVQWDTL*FSGNWS Trigger: TGACCAGTTACCTGAGAAGCAGAGGGTATCCCACTG...GACGGCAATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | GGTCGATGCTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGAATTAGGGTTGTGGAGCTGTaGACTCTGAAGCTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRCCFCRSLNPPLLAQRIRVVEL*TLKLLE Trigger: CTCAAGGAGCTTCAGAGTCCACAGCTCCACAACCCT...AATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCGATTCCACCTGTGCCTGAAGCAATTGTAATGACAGTAATGCGATGGAAAAGCGGGTTGAGTACCTaGGAGCAAGGCCTTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSIPPVPEAIVMTVMRWKSGLST*EQGLPL Trigger: AAGGGGAAGGCCTTGCTCCCAGGTACTCAACCCGCT...TTTCCATCGCATTACTGTCATTACAATTGCTTCAGGCACAGGTGGAATCGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | ATGGATTCCAAGAATCAGAGGGTAGCGTGGTGCATGAATAATGTCAAACTGGAGCAGGTTGGTTTTCAGTaGGAGGACCCTCGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MDSKNQRVAWCMNNVKLEQVGFQ*EDPRTH Trigger: ATGGGTCCGAGGGTCCTCCCACTGAAAACCAACCTG...CTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | ATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGAGAGACTCATTGGTCTCTaGGGGCTCCTGGGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRGKILLRIGIFSRRTTERLIGL*GLLGLL Trigger: AAGGAGCCCCAGGAGCCCCCAGAGACCAATGAGTCT...CTCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | AGCGTCGTTGTACAGGTAGCCTTCGTTCATAGCCAGAGGTTCAGTGAAAGATTCCTATCTAATAAGGGCTaGAACATCCTTCCCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVVVQVAFVHSQRFSERFLSNKG*NILPAS Trigger: TGAGGCGGGAAGGATGTTCCAGCCCTTATTAGATAG...GAATCTTTCACTGAACCTCTGGCTATGAACGAAGGCTACCTGTACAACGACGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | TACTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCACTGGCAAGCTCTTCTTaGAATTGGATGCAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSIRCLGHGSQANGFQESLASSS*NWMQSV Trigger: CACGCTCTGCATCCAATTTCAAGAAGAGCTTGCCAG...TGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTTGGGTCATGGGTCTCAACCCAAATCTAACTCTTaGGCAATGAGATGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MEMTQFGYSIRCLGHGSQPKSNS*AMRWKR Trigger: CCGCTTCCATCTCATTGCGCAAGAGTTAGATTTGGG...TTGAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR GCA 90 bp | AATCAGCGGACGCCCATCGACCGTTTCAAGCATAAGAGGGAAGATATTATTGCGCTTCTTGAAATTGGATaGAGAGCGTGCTTTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQRTPIDRFKHKREDIIALLEIG*RACFHP Trigger: TGGGTGAAAGCACGCTCTGCATCCAATTTCAAGAAG...CGCAATAATATCTTCCCTCTTATGCTTGAAACGGTCGATGGGCGTCCGCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | ATGGATTCCAAGAATCAGAGGGTAGCGTGGTGCATGAATAATGTCAAACTGGAGTCTGGCAAAATGACCTaGATGGCCACAGTAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MDSKNQRVAWCMNNVKLESGKMT*MATVEA Trigger: TGCCTCTACTGTGGCCATCCAGGTCATTTTGCCAGA...CTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | ATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTTGGGTCATGGGTCTCAATCTGAAAATCCTCACTaGAGGCCAAAGGGTACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: MEMTQFGYSIRCLGHGSQSENPH*RPKGTL Trigger: TAGAGTACCCTTTGGCCTTCAGTGAGGATTTTCAGA...TTGAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | ATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGAGGGTAACTCAGAGAGTTTCTaGAAATCCTCACTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRCLGHGSQANGFQESEGNSESF*KSSLKA Trigger: GGCCTTCAGTGAGGATTTTCAGAAACTCTCTGAGTT...ACCCTCTGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | CATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGATCTGGTATCTGGGCCTaGAGGGCAGCATTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKREDIIADWYLLSKNHRSGIWA*RAAFSS Trigger: GGAAGAAAATGCTGCCCTCCAGGCCCAGATACCAGA...TCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | CATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGAGCCTTCTGGATCTCCTaGGATTCCTTGACTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKREDIIADWYLLSKNHRAFWIS*DSLTAG Trigger: ACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGC...TCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| 3UTR CAA 72 bp | ATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTaGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MEMTQFGYSIRC*GHGSQANGFQE Trigger: TTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | AATGCGATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTTGGGTCATGGGCAAGACAGTTCATTTTaGATAGAACTGGCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NAMEMTQFGYSIRCLGHGQDSSF*IELASS Trigger: AGAGCTTGCCAGTTCTATTCAAAATGAACTGTCTTG...CCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | GTAATGGGTCCATTAATCAGCGGACGCCCATCGACCGTTTCAAGCATAAGAGGGAACTTCCAAGCTTTCTaGATTGTCAAAAGTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMGPLISGRPSTVSSIRGNFQAF*IVKSIL Trigger: CAAGATACTTTTGACAATCCAGAAAGCTTGGAAGTT...CCCTCTTATGCTTGAAACGGTCGATGGGCGTCCGCTGATTAATGGACCCATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| 3UTR CAA 72 bp | CCATCGACCGTTTCAAGCATAAGAGGGAAGATATTATaGCGGATTGGTATCTTCTCTCGAAGAACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTVSSIRGKIL*RIGIFSRRTTE Trigger: CTCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATGCTTGAAACGGTCGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | TCAAGCATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCGCCTCTAATTCACACTaGGCCTGTTCTGTTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSIRGKILLRIGIFSRRTASNSH*ACSVPV Trigger: AACAGGAACAGAACAGGCCCAGTGTGAATTAGAGGC...GGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATGCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | ATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGAGCATCAGATAGGTTGGTaGCTGGACTTGTGCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: IRGKILLRIGIFSRRTTEHQIGW*LDLCKT Trigger: TGTCTTGCACAAGTCCAGCCACCAACCTATCTGATG...CTCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CCA 90 bp | CATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGATCACATCAGATAGGTTaGTGGCTGGACTTGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HKREDIIADWYLLSKNHRSHQIG*WLDLCK Trigger: CTTGCACAAGTCCAGCCACCAACCTATCTGATGTGA...TCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCGATTCCACCTGTGCCTGAAGCAATTGTAATGACAGTAATGCGATGGAAATGGTGGCTGGACTTGTaGAAGACAGTTCATTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSIPPVPEAIVMTVMRWKWWLDL*KTVHFE Trigger: TTCAAAATGAACTGTCTTGCACAAGTCCAGCCACCA...TTTCCATCGCATTACTGTCATTACAATTGCTTCAGGCACAGGTGGAATCGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | CATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGAATGAGCCTTTTCACTTaGGCCTGCAGAATTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: HKREDIIADWYLLSKNHRMSLFT*ACRISF Trigger: GAATGAAATTCTGCAGGCTCAAGTGAAAAGGCTCAT...TCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR TCA 90 bp | AATTGTAATGACAGTAATGCGATGGAAATGACACAGTTCGGGTACTCCATTCGACGATTACTTGTAGCTTaGACAGGTTGGTTTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NCNDSNAMEMTQFGYSIRRLLVA*TGWFSV Trigger: CACTGAAAACCAACCTGTTCAAGCTACAAGTAATCG...TCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATTACTGTCATTACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 90 bp | GGGTTGCTGGGGACTCCAGAGCCTTCTGGATCTCCTGGGATTCCTTaGCTGCTGGTGGCTTCCAGGCTGTGGAATCCAGGGCCTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLLGTPEPSGSPGIP*LLVASRLWNPGPLG Trigger: CCCCAGAGGCCCTGGATTCCACAGCCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCTCTGGAGTCCCCAGCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS GCA 90 bp | TGCTGGGGACTCCAGAGCCTTCTGGATCTCCTGGGATTCCTTGACTaGTGGTGGCTTCCAGGCTGTGGAATCCAGGGCCTCTGGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CWGLQSLLDLLGFLD*WWLPGCGIQGLWGL Trigger: GAGCCCCCAGAGGCCCTGGATTCCACAGCCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCTCTGGAGTCCCCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS GCA 90 bp | ACCTGGATGGCCACAGTAGAGGCACAAGTGGCCTTCGCGGCGTCTTaGCCGTTCAGCCTCGCTGAGGTGGGGGCGATTACTTGTAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TWMATVEAQVAFAAS*PFSLAEVGAITCSL Trigger: CAAGCTACAAGTAATCGCCCCCACCTCAGCGAGGCTGAACGGGCAAGACGCCGCGAAGGCCACTTGTGCCTCTACTGTGGCCATCCAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | TGGGGCCTCTGGGTTGCTGGGGACTCCAGAGCCTTCTGGATCTCCTaGGATTCCTTGACTGCTGGTGGCTTCCAGGCTGTGGAATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGLWVAGDSRAFWIS*DSLTAGGFQAVESR Trigger: CCTGGATTCCACAGCCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCTCTGGAGTCCCCAGCAACCCAGAGGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 90 bp | GGGGCTCTTGGGCCTCTGAGGGCTTTCGGAGTGGTTCATGCTCTTTaGCTGCTCCGGATTTCTGGAGCTCTGGTATCTGGGCCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GALGPLRAFGVVHAL*LLRISGALVSGPGG Trigger: CCCTCCAGGCCCAGATACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGAGCATGAACCACTCCGAAAGCCCTCAGAGGCCCAAGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 90 bp | ACCGCCGGGCCTCCATGTTTCCCGCCTGCTGGACACGATGAGGCTTaGCAGGGCAGTCTCTGGCAAAATGACCTGGATGGCCACAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TAGPPCFPPAGHDEA*QGSLWQNDLDGHSR Trigger: TCTACTGTGGCCATCCAGGTCATTTTGCCAGAGACTGCCCTGTCAAGCCTCATCGTGTCCAGCAGGCGGGAAACATGGAGGCCCGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | TTCCTTGACTGCTGGTGGCTTCCAGGCTGTGGAATCCAGGGCCTCTaGGGGCTCCCAGGATTCCTTGACCATTGGAAGCTCCTGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLDCWWLPGCGIQGL*GLPGFLDHWKLLRS Trigger: GGACCTCAGGAGCTTCCAATGGTCAAGGAATCCTGGGAGCCCCCAGAGGCCCTGGATTCCACAGCCTGGAAGCCACCAGCAGTCAAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 90 bp | TCCAGGCTGTGGAATCCAGGGCCTCTGGGGGCTCCCAGGATTCCTTaGCCATTGGAAGCTCCTGAGGTCCCCAGTACTCCTTGGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRLWNPGPLGAPRIP*PLEAPEVPSTPWTL Trigger: CAAAGTCCAAGGAGTACTGGGGACCTCAGGAGCTTCCAATGGTCAAGGAATCCTGGGAGCCCCCAGAGGCCCTGGATTCCACAGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | GTGATGGCTGAGGATTCTCCAGACTCATTGGTCTCTGGGGGCTCCTaGGGCTCCTTGATCTCTGGGGGTTCCCTGAGCTCACTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VMAEDSPDSLVSGGS*GSLISGGSLSSLMA Trigger: AGCCATCAGTGAGCTCAGGGAACCCCCAGAGATCAAGGAGCCCCAGGAGCCCCCAGAGACCAATGAGTCTGGAGAATCCTCAGCCATCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | ATTTGTAGGGTTGTGGAGCTGTGGACTCTGAAGCTCCTTGAGGGCTaGGGTACCCTGGTTGTCTGTGGGCTCCGCCTCACAGACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ICRVVELWTLKLLEG*GTLVVCGLRLTDCW Trigger: CCAGCAGTCTGTGAGGCGGAGCCCACAGACAACCAGGGTACCCCAGCCCTCAAGGAGCTTCAGAGTCCACAGCTCCACAACCCTACAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | CGATGCTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGAATTGCCCCTGGGGCCTCTGGGTaGCTGGGGACTCCAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCCFCRSLNPPLLAQRIAPGASG*LGTPEP Trigger: AGGCTCTGGAGTCCCCAGCAACCCAGAGGCCCCAGG...GGCAATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | GTTTCTTTGGTAATGGGTCCATTAATCAGCGGACGCCCATCGACCGTTTCAAGCGCTGGGGTACCCTGGTaGTCTGTGGGCTCCGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLVMGPLISGRPSTVSSAGVPW*SVGSAS Trigger: TGAGGCGGAGCCCACAGACAACCAGGGTACCCCAGC...GCTTGAAACGGTCGATGGGCGTCCGCTGATTAATGGACCCATTACCAAAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS GCA 90 bp | CTAATAAGGGCTGGAACATCCTTCCCGCCTCACCTGAGAAGAAGCTaGCAACAAAGCTCACTAGAGCCGCTTCAGTGGGATACCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LIRAGTSFPPHLRRS*QQSSLEPLQWDTLC Trigger: GCAGAGGGTATCCCACTGAAGCGGCTCTAGTGAGCTTTGTTGGCAGCTTCTTCTCAGGTGAGGCGGGAAGGATGTTCCAGCCCTTATTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | GAGGGCTTTCGGAGTGGTTCATGCTCTTTGACTGCTCCGGATTTCTaGAGCTCTGGTATCTGGGCCTGGAGGGCAGCATTTTCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: EGFRSGSCSLTAPDF*SSGIWAWRAAFSSM Trigger: CATGGAAGAAAATGCTGCCCTCCAGGCCCAGATACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGAGCATGAACCACTCCGAAAGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | TGGAACCGTCTGAGACTCCTCATCATTTGTAGGGTTGTGGAGCTGTaGACTCTGAAGCTCCTTGAGGGCTGGGGTACCCTGGTTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WNRLRLLIICRVVEL*TLKLLEGWGTLVVC Trigger: ACAGACAACCAGGGTACCCCAGCCCTCAAGGAGCTTCAGAGTCCACAGCTCCACAACCCTACAAATGATGAGGAGTCTCAGACGGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | ATGCAGAGCGTGCTTTCACCCAAATCTAACTCTTGCGCAATGAGATaGAAGCGGGTTGAGTACCTGGGAGCAAGGCCTTCCCCTTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: MQSVLSPKSNSCAMR*KRVEYLGARPSPWR Trigger: TCGCCAAGGGGAAGGCCTTGCTCCCAGGTACTCAACCCGCTTCCATCTCATTGCGCAAGAGTTAGATTTGGGTGAAAGCACGCTCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | TCGGAGTGGTTCATGCTCTTTGACTGCTCCGGATTTCTGGAGCTCTaGTATCTGGGCCTGGAGGGCAGCATTTTCTTCCATGAGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEWFMLFDCSGFLEL*YLGLEGSIFFHEPF Trigger: AAAAGGCTCATGGAAGAAAATGCTGCCCTCCAGGCCCAGATACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGAGCATGAACCACTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | GGTCGATGCTGTTTCTGTAGGAGCCTGAATCCACCATTGCTTGCTCAAAGAATTGGTCCCCAGTACTCCTaGGACTTTGGGGGCAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GRCCFCRSLNPPLLAQRIGPQYS*DFGGKW Trigger: CCATTTGCCCCCAAAGTCCAAGGAGTACTGGGGACC...AATTCTTTGAGCAAGCAATGGTGGATTCAGGCTCCTACAGAAACAGCATCGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | CACCTGAGAAGAAGCTGCCAACAAAGCTCACTAGAGCCGCTTCAGTaGGATACCCTCTGCTTCTCAGGTAACTGGTCAACTGAACTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLRRSCQQSSLEPLQ*DTLCFSGNWSTELK Trigger: TTTTAGTTCAGTTGACCAGTTACCTGAGAAGCAGAGGGTATCCCACTGAAGCGGCTCTAGTGAGCTTTGTTGGCAGCTTCTTCTCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | ATGGATTCCAAGAATCAGAGGGTAGCGTGGTGCATGAATAATGTCAAACTGGAGATCTCCTGGGATTCCTaGACTGCTGGTGGCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MDSKNQRVAWCMNNVKLEISWDS*TAGGFQ Trigger: CTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGAT...CTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGGAATCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTACATAATGCAGGGCTCAAAGAGGGAGGCATGCAAGGTTGGTGAGGAAGCAAGACAGTTCATTTaGAATAGAACTGGCAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QPYIMQGSKREACKVGEEARQFI*NRTGKL Trigger: GAGCTTGCCAGTTCTATTCAAAATGAACTGTCTTGC...TTCCTCACCAACCTTGCATGCCTCCCTCTTTGAGCCCTGCATTATGTAGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | ATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTTGGGTCATGGGTCTCAAACTGGCAAGCTCTTCTaGAAATTGGATGCAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: MEMTQFGYSIRCLGHGSQTGKLF*KLDAER Trigger: ACGCTCTGCATCCAATTTCAAGAAGAGCTTGCCAGT...TTGAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | GTCACTAGGACCCACCATCTAACCAGCAATTATTTCATCACGCCGTCTTCGATTATCACATCAGATAGGTaGGTGGCTGGACTTGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VTRTHHLTSNYFITPSSIITSDR*VAGLVQ Trigger: TTGCACAAGTCCAGCCACCAACCTATCTGATGTGAT...AATCGAAGACGGCGTGATGAAATAATTGCTGGTTAGATGGTGGGTCCTAGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 90 bp | TCACTAGAGCCGCTTCAGTGGGATACCCTCTGCTTCTCAGGTAACTaGTCAACTGAACTAAAAACTCAGAGAGTTTCTGAAAATCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLEPLQWDTLCFSGN*STELKTQRVSENPH Trigger: GTGAGGATTTTCAGAAACTCTCTGAGTTTTTAGTTCAGTTGACCAGTTACCTGAGAAGCAGAGGGTATCCCACTGAAGCGGCTCTAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | ATGGAAATGACACAGTTCGGGTACTCCATTCGATGTTTGGGTCATGGGTCTCAAAAGCTCTTCTTGAAATaGGATGCAGAGCGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MEMTQFGYSIRCLGHGSQKLFLK*DAERAF Trigger: GAAAGCACGCTCTGCATCCAATTTCAAGAAGAGCTT...TTGAGACCCATGACCCAAACATCGAATGGAGTACCCGAACTGTGTCATTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | CATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGAGGTTGGTGGCTGGACTaGTGCAAGACAGTTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HKREDIIADWYLLSKNHRGWWLD*CKTVHF Trigger: AAAATGAACTGTCTTGCACAAGTCCAGCCACCAACC...TCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | TACTCCATTCGATGTTTGGGTCATGGGTCTCAAGCCAATGGATTCCAAGAATCAGCGATTACTTGTAGCTaGAACAGGTTGGTTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YSIRCLGHGSQANGFQESAITCS*NRLVFS Trigger: ACTGAAAACCAACCTGTTCAAGCTACAAGTAATCGC...TGATTCTTGGAATCCATTGGCTTGAGACCCATGACCCAAACATCGAATGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | AATTGTAATGACAGTAATGCGATGGAAATGACACAGTTCGGGTACTCCATTCGACATGAGCCTTTTCACTaGAGCCTGCAGAATTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: NCNDSNAMEMTQFGYSIRHEPFH*SLQNFI Trigger: AATGAAATTCTGCAGGCTCAAGTGAAAAGGCTCATG...TCGAATGGAGTACCCGAACTGTGTCATTTCCATCGCATTACTGTCATTACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS-3UTR CAA 90 bp | CATAAGAGGGAAGATATTATTGCGGATTGGTATCTTCTCTCGAAGAACCACAGATCCAAGCTTTCTGGATaGTCAAAAGTATCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HKREDIIADWYLLSKNHRSKLSG*SKVSWS Trigger: GCTCCAAGATACTTTTGACAATCCAGAAAGCTTGGA...TCTGTGGTTCTTCGAGAGAAGATACCAATCCGCAATAATATCTTCCCTCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS GCA 72 bp | GCCACAGTAGAGGCACAAGTGGCCTTCGCGGCGTCTTaGCCGTTCAGCCTCGCTGAGGTGGGGGCGATTACT | + |
|
Preference number: 6 (lower is better) Translates to: ATVEAQVAFAAS*PFSLAEVGAIT Trigger: AGTAATCGCCCCCACCTCAGCGAGGCTGAACGGGCAAGACGCCGCGAAGGCCACTTGTGCCTCTACTGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | AGCCTTCTGGATCTCCTGGGATTCCTTGACTGCTGGTaGCTTCCAGGCTGTGGAATCCAGGGCCTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLLDLLGFLDCW*LPGCGIQGLWG Trigger: CCCCCAGAGGCCCTGGATTCCACAGCCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | TGGGGCCTCTGGGTTGCTGGGGACTCCAGAGCCTTCTaGATCTCCTGGGATTCCTTGACTGCTGGTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WGLWVAGDSRAF*ISWDSLTAGGF Trigger: GAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCTCTGGAGTCCCCAGCAACCCAGAGGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | GTTGTGGAGCTGTGGACTCTGAAGCTCCTTGAGGGCTaGGGTACCCTGGTTGTCTGTGGGCTCCGCCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VVELWTLKLLEG*GTLVVCGLRLT Trigger: TGTGAGGCGGAGCCCACAGACAACCAGGGTACCCCAGCCCTCAAGGAGCTTCAGAGTCCACAGCTCCACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CAA 90 bp | GGGGGCTCTTGGGCCTCTGAGGGCTTTCGGAGTGGTTCATGCTCTTaGACTGCTCCGGATTTCTGGAGCTCTGGTATCTGGGCCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSWASEGFRSGSCS*TAPDFWSSGIWAWR Trigger: CCTCCAGGCCCAGATACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGAGCATGAACCACTCCGAAAGCCCTCAGAGGCCCAAGAGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 72 bp | TGGAATCCAGGGCCTCTGGGGGCTCCCAGGATTCCTTaGCCATTGGAAGCTCCTGAGGTCCCCAGTACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WNPGPLGAPRIP*PLEAPEVPSTP Trigger: AGGAGTACTGGGGACCTCAGGAGCTTCCAATGGTCAAGGAATCCTGGGAGCCCCCAGAGGCCCTGGATTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS GCA 72 bp | CTCCAGAGCCTTCTGGATCTCCTGGGATTCCTTGACTaGTGGTGGCTTCCAGGCTGTGGAATCCAGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSLLDLLGFLD*WWLPGCGIQGL Trigger: GAGGCCCTGGATTCCACAGCCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCTCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | CAGGGCCTCTGGGGGCTCCCAGGATTCCTTGACCATTaGAAGCTCCTGAGGTCCCCAGTACTCCTTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: QGLWGLPGFLDH*KLLRSPVLLGL Trigger: AAGTCCAAGGAGTACTGGGGACCTCAGGAGCTTCCAATGGTCAAGGAATCCTGGGAGCCCCCAGAGGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | CAGAGCCTTCTGGATCTCCTGGGATTCCTTGACTGCTaGTGGCTTCCAGGCTGTGGAATCCAGGGCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QSLLDLLGFLDC*WLPGCGIQGLW Trigger: CCAGAGGCCCTGGATTCCACAGCCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | TGGGTTGCTGGGGACTCCAGAGCCTTCTGGATCTCCTaGGATTCCTTGACTGCTGGTGGCTTCCAGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WVAGDSRAFWIS*DSLTAGGFQAV Trigger: CACAGCCTGGAAGCCACCAGCAGTCAAGGAATCCCAGGAGATCCAGAAGGCTCTGGAGTCCCCAGCAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 72 bp | CTTGATCTCTGGGGGTTCCCTGAGCTCACTGATGGCTaGGGGTTCCCTGGGCTCTCTGATCTTTGTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LDLWGFPELTDG*GFPGLSDLCGL Trigger: GAGCCCACAAAGATCAGAGAGCCCAGGGAACCCTCAGCCATCAGTGAGCTCAGGGAACCCCCAGAGATCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 72 bp | CCTCCATGTTTCCCGCCTGCTGGACACGATGAGGCTTaGCAGGGCAGTCTCTGGCAAAATGACCTGGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPCFPPAGHDEA*QGSLWQNDLDG Trigger: GCCATCCAGGTCATTTTGCCAGAGACTGCCCTGTCAAGCCTCATCGTGTCCAGCAGGCGGGAAACATGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 72 bp | GGGCCTCTGAGGGCTTTCGGAGTGGTTCATGCTCTTTaGCTGCTCCGGATTTCTGGAGCTCTGGTATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPLRAFGVVHAL*LLRISGALVSG Trigger: CCCAGATACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGAGCATGAACCACTCCGAAAGCCCTCAGAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 72 bp | GAGTACCTGGGAGCAAGGCCTTCCCCTTGGCGAAGTTaGGGGAGGCCCTGGTTAGCAACTTCCAAGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EYLGARPSPWRS*GRPWLATSKLS Trigger: AGAAAGCTTGGAAGTTGCTAACCAGGGCCTCCCTCAACTTCGCCAAGGGGAAGGCCTTGCTCCCAGGTACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 72 bp | TCAGCCTCGCTGAGGTGGGGGCGATTACTTGTAGCTTaGACAGGTTGGTTTTCAGTGGGAGGACCCTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SASLRWGRLLVA*TGWFSVGGPSD Trigger: GTCCGAGGGTCCTCCCACTGAAAACCAACCTGTTCAAGCTACAAGTAATCGCCCCCACCTCAGCGAGGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS GCA 72 bp | GGCTCTTGGGCCTCTGAGGGCTTTCGGAGTGGTTCATaGTCTTTGACTGCTCCGGATTTCTGGAGCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSWASEGFRSGS*SLTAPDFWSSG Trigger: ACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGAGCATGAACCACTCCGAAAGCCCTCAGAGGCCCAAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS GCA 72 bp | GCTGGAACATCCTTCCCGCCTCACCTGAGAAGAAGCTaGCAACAAAGCTCACTAGAGCCGCTTCAGTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AGTSFPPHLRRS*QQSSLEPLQWD Trigger: ATCCCACTGAAGCGGCTCTAGTGAGCTTTGTTGGCAGCTTCTTCTCAGGTGAGGCGGGAAGGATGTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | CTGAGACTCCTCATCATTTGTAGGGTTGTGGAGCTGTaGACTCTGAAGCTCCTTGAGGGCTGGGGTACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRLLIICRVVEL*TLKLLEGWGTL Trigger: CAGGGTACCCCAGCCCTCAAGGAGCTTCAGAGTCCACAGCTCCACAACCCTACAAATGATGAGGAGTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CAA 72 bp | CTGAACTCTGTGATGGCTGAGGATTCTCCAGACTCATaGGTCTCTGGGGGCTCCTGGGGCTCCTTGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LNSVMAEDSPDS*VSGGSWGSLIS Trigger: AGAGATCAAGGAGCCCCAGGAGCCCCCAGAGACCAATGAGTCTGGAGAATCCTCAGCCATCACAGAGTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | TCTTTGACTGCTCCGGATTTCTGGAGCTCTGGTATCTaGGCCTGGAGGGCAGCATTTTCTTCCATGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLTAPDFWSSGI*AWRAAFSSMSL Trigger: AAGGCTCATGGAAGAAAATGCTGCCCTCCAGGCCCAGATACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | GTGCTTTCACCCAAATCTAACTCTTGCGCAATGAGATaGAAGCGGGTTGAGTACCTGGGAGCAAGGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLSPKSNSCAMR*KRVEYLGARPS Trigger: GGAAGGCCTTGCTCCCAGGTACTCAACCCGCTTCCATCTCATTGCGCAAGAGTTAGATTTGGGTGAAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CAA 72 bp | GGGAGGCCCTGGTTAGCAACTTCCAAGCTTTCTGGATaGTCAAAAGTATCTTGGAGCGCTCGCAGGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GRPWLATSKLSG*SKVSWSARRSL Trigger: AAGGCTCCTGCGAGCGCTCCAAGATACTTTTGACAATCCAGAAAGCTTGGAAGTTGCTAACCAGGGCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | TTCATGCTCTTTGACTGCTCCGGATTTCTGGAGCTCTaGTATCTGGGCCTGGAGGGCAGCATTTTCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FMLFDCSGFLEL*YLGLEGSIFFH Trigger: ATGGAAGAAAATGCTGCCCTCCAGGCCCAGATACCAGAGCTCCAGAAATCCGGAGCAGTCAAAGAGCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | AGAAGCTGCCAACAAAGCTCACTAGAGCCGCTTCAGTaGGATACCCTCTGCTTCTCAGGTAACTGGTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RSCQQSSLEPLQ*DTLCFSGNWST Trigger: AGTTGACCAGTTACCTGAGAAGCAGAGGGTATCCCACTGAAGCGGCTCTAGTGAGCTTTGTTGGCAGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS TCA 72 bp | AGCTGTGATGAGGTCTCCTGGTATTCTGGAACCGTCTaGGACTCCTCATCATTTGTAGGGTTGTGGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCDEVSWYSGTV*DSSSFVGLWSC Trigger: ACAGCTCCACAACCCTACAAATGATGAGGAGTCTCAGACGGTTCCAGAATACCAGGAGACCTCATCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
||
| CDS CCA 72 bp | CCGCTTCAGTGGGATACCCTCTGCTTCTCAGGTAACTaGTCAACTGAACTAAAAACTCAGAGAGTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PLQWDTLCFSGN*STELKTQRVSE Trigger: TTCAGAAACTCTCTGAGTTTTTAGTTCAGTTGACCAGTTACCTGAGAAGCAGAGGGTATCCCACTGAAGCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062010.10 |
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