Pregenerated sensors for RTKN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037846Ensembl transcript IDs: ENSMUST00000068994.14, ENSMUST00000105437.8, ENSMUST00000117086.2, ENSMUST00000118160.8, ENSMUST00000147556.8
Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGATGGACAGAGCTCAGCAGCCTGGAGCCTCCTTCCTTCAGTGTaGTGGTTTGTGGTGCCCGTTAGGGCTTGGGAGGTCCTGGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: PDGQSSAAWSLLPSV*WFVVPVRAWEVLVC Trigger: ACAGACCAGGACCTCCCAAGCCCTAACGGGCACCACAAACCATCACACTGAAGGAAGGAGGCTCCAGGCTGCTGAGCTCTGTCCATCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR CCA 90 bp | AGAGCTCAGCAGCCTGGAGCCTCCTTCCTTCAGTGTGATGGTTTGTaGTGCCCGTTAGGGCTTGGGAGGTCCTGGTCTGTTCAGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: RAQQPGASFLQCDGL*CPLGLGRSWSVQDC Trigger: ACAGTCCTGAACAGACCAGGACCTCCCAAGCCCTAACGGGCACCACAAACCATCACACTGAAGGAAGGAGGCTCCAGGCTGCTGAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR GCA 90 bp | GCTCAGCAGCCTGGAGCCTCCTTCCTTCAGTGTGATGGTTTGTGGTaGCCGTTAGGGCTTGGGAGGTCCTGGTCTGTTCAGGACTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: AQQPGASFLQCDGLW*PLGLGRSWSVQDCF Trigger: AAAACAGTCCTGAACAGACCAGGACCTCCCAAGCCCTAACGGGCACCACAAACCATCACACTGAAGGAAGGAGGCTCCAGGCTGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR GCA 90 bp | TCAAGTTTCCATGGCTGTAGGAGTCTCCACACAGCTTCTGCCTTCTaGCTTCACAGAGGGCCCTTTGTCGCTGCTCTCGGGTTCCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SSFHGCRSLHTASAF*LHRGPFVAALGFPF Trigger: AAAGGGGAACCCGAGAGCAGCGACAAAGGGCCCTCTGTGAAGGCAGAAGGCAGAAGCTGTGTGGAGACTCCTACAGCCATGGAAACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 |
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| 3UTR TCA 90 bp | CTCTGGGAAGGAGGCTGGTTTCAGACCTGGTGCAAAGCTGCCCTCTaGGAACACAACTCCTCCAGAGTGTCTCCAGGAACACATACATAC | + |
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Preference number: 1 (lower is better) Translates to: LWEGGWFQTWCKAAL*EHNSSRVSPGTHTY Trigger: GTATGTATGTGTTCCTGGAGACACTCTGGAGGAGTTGTGTTCTCAGAGGGCAGCTTTGCACCAGGTCTGAAACCAGCCTCCTTCCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR GCA 90 bp | GGTGACAGAGCAGGCTTTCCAAACTTCTCCTTTTCCCAAGAAGCATaGTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GDRAGFPNFSFSQEA*SLLMSSQVHRISGL Trigger: GAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAAGTTTGGAAAGCCTGCTCTGTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
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| 3UTR TCA 90 bp | ATTCACTGGAAGAATTGTAAACACCCGGAAGCCTTCCATGCCAGGTaGCAGAGCAGGCTTTCCAAACTTCTCCTTTTCCCAAGAAGCATG | + |
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Preference number: 1 (lower is better) Translates to: IHWKNCKHPEAFHAR*QSRLSKLLLFPRSM Trigger: CATGCTTCTTGGGAAAAGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGTTTACAATTCTTCCAGTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
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| 3UTR GCA 90 bp | AAGGATGTAAGATCTCTGGGATGTTCGAGGTGTGTGTTTTCTCTCTaGCCCTTGGGGCTCTCCCTTAGCATATCTGCTTTCTTCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: KDVRSLGCSRCVFSL*PLGLSLSISAFFSS Trigger: AGAAGAGAAGAAAGCAGATATGCTAAGGGAGAGCCCCAAGGGGCAGAGAGAAAACACACACCTCGAACATCCCAGAGATCTTACATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR GCA 90 bp | CCATTGCTTCTGGTCACATTTCAAAAGCTGACAAGGCATAGTTGTTaGCGTACAGTCATGTTCATGAACACTTTGTACTGTTACAATAGT | + |
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Preference number: 1 (lower is better) Translates to: PLLLVTFQKLTRHSC*RTVMFMNTLYCYNS Trigger: ACTATTGTAACAGTACAAAGTGTTCATGAACATGACTGTACGGCAACAACTATGCCTTGTCAGCTTTTGAAATGTGACCAGAAGCAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR CCA 90 bp | GTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTGATTaGCTGACCCAGGTTTTGCAAATATTGGAACATTTCGTCACACAA | + |
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Preference number: 1 (lower is better) Translates to: VGFCNFMYPQSGVCD*LTQVLQILEHFVTQ Trigger: TTGTGTGACGAAATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR TCA 90 bp | GTATTAAGTAAAAATTTAAAGGCATTAATTGGCTACTTGTCTCCCTaGACTCCAGAGGCCATGATGGAGATTAACATCATACAGGAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: VLSKNLKALIGYLSP*TPEAMMEINIIQEA Trigger: GGCTTCCTGTATGATGTTAATCTCCATCATGGCCTCTGGAGTTCAGGGAGACAAGTAGCCAATTAATGCCTTTAAATTTTTACTTAATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR GCA 90 bp | AGGTGCTTTTCTGTACCTAACAGCTTATTAATGGCTTCTGGAAACTaGTCTGGCCTTTACCTATACAATTACATAACATTACCCATAGAA | + |
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Preference number: 1 (lower is better) Translates to: RCFSVPNSLLMASGN*SGLYLYNYITLPIE Trigger: TTCTATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTACAGAAAAGCACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR CAA 90 bp | GACAGAGCTCAGCAGCCTGGAGCCTCCTTCCTTCAGTGTGATGGTTaGTGGTGCCCGTTAGGGCTTGGGAGGTCCTGGTCTGTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: DRAQQPGASFLQCDG*WCPLGLGRSWSVQD Trigger: GTCCTGAACAGACCAGGACCTCCCAAGCCCTAACGGGCACCACAAACCATCACACTGAAGGAAGGAGGCTCCAGGCTGCTGAGCTCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACGCCTTCCATGCCAGGTaGCAGAGCAGGCTTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: HVLLALSGKWDAGPCLTHAFHAR*QSRLSK Trigger: TTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGC...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCCCAGAGCCTTACAGCTaGATTTACATAGTCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: CWALSDTHGAIAIFLPSAPEPYS*IYIVPA Trigger: AGCCGGGACTATGTAAATCCAGCTGTAAGGCTCTGG...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCTTTTCCCAAGAAGCATaGTCCTTGCTGATGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CWALSDTHGAIAIFLPSAFSQEA*SLLMSS Trigger: GCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAA...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
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| 3UTR-3UTR GCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGCAGAGGACCCTTAGATaGCAATTCCAGGAAGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: PLHSPRSMLLADEQPSPQQRTLR*QFQEAE Trigger: CTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTG...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACCCTAAATTCTTCCAGCGGCTGTGTGTTTTCTCTCTaGCCCTTGGGGCTCTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTLNSSSGCVFSL*PLGLSL Trigger: AAGGGAGAGCCCCAAGGGGCAGAGAGAAAACACACA...GCCGCTGGAAGAATTTAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGCCAGAGCCTTACAGCTaGATTTACATAGTCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: PLHSPRSMLLADEQPSPQPEPYS*IYIVPA Trigger: AGCCGGGACTATGTAAATCCAGCTGTAAGGCTCTGG...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACATGGCTTCTGGAAACTaGTCTGGCCTTTACCTATAC | + |
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Preference number: 2 (lower is better) Translates to: RGEARGPLDANSRKRRGNMASGN*SGLYLY Trigger: GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACAACAGCATTGTCTTGTaGCATGACCATTGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: HVLLALSGKWDAGPCLTHNSIVL*HDHCFW Trigger: CCAGAAGCAATGGTCATGTCACAAGACAATGCTGTT...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACCCTAAATTCTTCCAGCGGCAACTTGCACACGAAATCAGAAGTGGCTACTTGTCTCCCTaGACTCCAGAGGCCATGATG | + |
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Preference number: 2 (lower is better) Translates to: THTHPKFFQRQLAHEIRSGYLSP*TPEAMM Trigger: CATCATGGCCTCTGGAGTTCAGGGAGACAAGTAGCC...ACTTCTGATTTCGTGTGCAAGTTGCCGCTGGAAGAATTTAGGGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGATGGCTTCTGGAAACTaGTCTGGCCTTTACCTATAC | + |
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Preference number: 2 (lower is better) Translates to: PLHSPRSMLLADEQPSPQMASGN*SGLYLY Trigger: GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACCTTATTAATGGCTTCTaGAAACTGCTCTGGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RGEARGPLDANSRKRRGNLINGF*KLLWPL Trigger: TAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAG...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGCCAGAGCCTTACAGCTaGATTTACATAGTCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGPEPYS*IYIVPA Trigger: AGCCGGGACTATGTAAATCCAGCTGTAAGGCTCTGG...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR CAA 90 bp | TTGCACACGAAATCAGAAGTGGCTGGTGAATTTAAATCCCGGCCTTaGTTGGCCACTTTACACAGATGTAGTTCCCATCCAGATGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LHTKSEVAGEFKSRP*LATLHRCSSHPDGQ Trigger: CTGTCCATCTGGATGGGAACTACATCTGTGTAAAGTGGCCAACAAAGGCCGGGATTTAAATTCACCAGCCACTTCTGATTTCGTGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATGCTCTTTCTGGTAAGTaGGATGCTGGGCCCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: QPQCRYSILHFPETWVLYALSGK*DAGPCL Trigger: CAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGC...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCCCAGAGCCTTACAGCTaGATTTACATAGTCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: MASGNCSGLYLYNYITLPPEPYS*IYIVPA Trigger: AGCCGGGACTATGTAAATCCAGCTGTAAGGCTCTGG...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACCCTAAATTCTTCCAGCGGCAACTTGCACACGAAATCAGAAGTCCCTCTGGGAAGTTTTaGTTGGAAATTATGATGACA | + |
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Preference number: 2 (lower is better) Translates to: THTHPKFFQRQLAHEIRSPSGKF*LEIMMT Trigger: TGTCATCATAATTTCCAAGCAAAACTTCCCAGAGGG...ACTTCTGATTTCGTGTGCAAGTTGCCGCTGGAAGAATTTAGGGTGTGTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGCTTATTAATGGCTTCTaGAAACTGCTCTGGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGLINGF*KLLWPL Trigger: TAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAG...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | AATATCACTGCCATTCACTGGAAGAATTGTAAACACCCGGAAGCCTTCCATGCCCTTATTAATGGCTTCTaGAAACTGCTCTGGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NITAIHWKNCKHPEAFHALINGF*KLLWPL Trigger: TAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAG...GGCATGGAAGGCTTCCGGGTGTTTACAATTCTTCCAGTGAATGGCAGTGATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR CAA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATaGTCTTGTGACATGACCATTGCTTCTGGTCACATTTCAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: FLQPQLNKGEGSLTA*SCDMTIASGHISKA Trigger: AGCTTTTGAAATGTGACCAGAAGCAATGGTCATGTCACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGTTCTGGAAACTGCTCTaGCCTTTACCTATACAATTA | + |
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Preference number: 2 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGFWKLL*PLPIQL Trigger: TAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAA...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTAAGTACACGAAATCAGAAGTaGCTGGTGAATTTAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: FFSSHLKTSMYSLLFLVSTRNQK*LVNLNP Trigger: GGGATTTAAATTCACCAGCCACTTCTGATTTCGTGT...ACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATATTTTGCAATATCACTaGCATTCACTGGAAGAATTG | + |
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Preference number: 2 (lower is better) Translates to: QPQCRYSILHFPETWVLYILQYH*HSLEEL Trigger: CAATTCTTCCAGTGAATGGCAGTGATATTGCAAAAT...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR TCA 72 bp | CAGAGCTCAGCAGCCTGGAGCCTCCTTCCTTCAGTGTaGTGGTTTGTGGTGCCCGTTAGGGCTTGGGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QSSAAWSLLPSV*WFVVPVRAWEV Trigger: GACCTCCCAAGCCCTAACGGGCACCACAAACCATCACACTGAAGGAAGGAGGCTCCAGGCTGCTGAGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR GCA 72 bp | CATGGCTGTAGGAGTCTCCACACAGCTTCTGCCTTCTaGCTTCACAGAGGGCCCTTTGTCGCTGCTCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: HGCRSLHTASAF*LHRGPFVAALG Trigger: CCCGAGAGCAGCGACAAAGGGCCCTCTGTGAAGGCAGAAGGCAGAAGCTGTGTGGAGACTCCTACAGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 |
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| 3UTR CCA 72 bp | CAGCCTGGAGCCTCCTTCCTTCAGTGTGATGGTTTGTaGTGCCCGTTAGGGCTTGGGAGGTCCTGGTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: QPGASFLQCDGL*CPLGLGRSWSV Trigger: AACAGACCAGGACCTCCCAAGCCCTAACGGGCACCACAAACCATCACACTGAAGGAAGGAGGCTCCAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| 3UTR CCA 72 bp | GAAAACCAGCATGTACTCCTTGCTCTTTCTGGTAAGTaGGATGCTGGGCCCTGTCTGACACACATGGGGCGA | + |
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Preference number: 3 (lower is better) Translates to: ENQHVLLALSGK*DAGPCLTHMGR Trigger: TCGCCCCATGTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR TCA 72 bp | TTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTaGCACACATGGGGCGATAGCAATCTTCCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LLFLVSGMLGPV*HTWGDSNLPSF Trigger: GAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR CCA 72 bp | CAGGCTTTCCAAACTTCTCCTTTTCCCATGAGGCTCTaGGAAGGAGGCTGGTTTCAGACCTGGTGCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: QAFQTSPFPMRL*EGGWFQTWCKA Trigger: AGCTTTGCACCAGGTCTGAAACCAGCCTCCTTCCCAGAGCCTCATGGGAAAAGGAGAAGTTTGGAAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGGATGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTGGCTGACCCAGGTTTaGCAAATATTGGAACATTTC | + |
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Preference number: 3 (lower is better) Translates to: VGCWALSDTHGAIAIFLPWLTQV*QILEHF Trigger: GAAATGTTCCAATATTTGCAAAACCTGGGTCAGCCA...AGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCATCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| 3UTR GCA 72 bp | ACAACTTTACTGGGGCTGGAGAGATGGCTCAGGACTTaGTCTTCCAGAGGTGCTGAGTTCAGTTCCCAACAA | + |
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Preference number: 3 (lower is better) Translates to: TTLLGLERWLRT*SSRGAEFSSQQ Trigger: TTGTTGGGAACTGAACTCAGCACCTCTGGAAGAGCAAGTCCTGAGCCATCTCTCCAGCCCCAGTAAAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCATGACCATCTGTAATGGGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLMTICNGI*CPLLVCLKTAM Trigger: CATAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTCATGAGCCACCATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 |
||
| 3UTR GCA 72 bp | GCAGGCTTTCCAAACTTCTCCTTTTCCCAAGAAGCATaGTCCTTGCTGATGAGCAGCCAAGTCCACAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: AGFPNFSFSQEA*SLLMSSQVHRI Trigger: AATCCTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAAGTTTGGAAAGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
||
| 3UTR CCA 72 bp | TGGGATGTTCGAGGTGTGTGTTTTCTCTCTGCCCCTTaGGGCTCTCCCTTAGCATATCTGCTTTCTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WDVRGVCFLSAP*GSPLAYLLSSL Trigger: AAGAGAAGAAAGCAGATATGCTAAGGGAGAGCCCCAAGGGGCAGAGAGAAAACACACACCTCGAACATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR TCA 72 bp | AAGAATTGTAAACACCCGGAAGCCTTCCATGCCAGGTaGCAGAGCAGGCTTTCCAAACTTCTCCTTTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KNCKHPEAFHAR*QSRLSKLLLFP Trigger: TGGGAAAAGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGTTTACAATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR CCA 72 bp | ATTCTTCCAGCGGCAACTTGCACACGAAATCAGAAGTaGCTGGTGAATTTAAATCCCGGCCTTTGTTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILPAATCTRNQK*LVNLNPGLCWP Trigger: TGGCCAACAAAGGCCGGGATTTAAATTCACCAGCCACTTCTGATTTCGTGTGCAAGTTGCCGCTGGAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACCAGGTTTTGCAAATATaGGAACATTTCGTCACACAA | + |
|
Preference number: 3 (lower is better) Translates to: RGEARGPLDANSRKRRGNQVLQI*EHFVTQ Trigger: TTGTGTGACGAAATGTTCCAATATTTGCAAAACCTG...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGACTTTATACCAGGAATaGAAAAGATCAACCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLHSPRSMLLADEQPSPQTLYQE*KRSTLE Trigger: CTCTAGGGTTGATCTTTTCAATTCCTGGTATAAAGT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR CCA 72 bp | ATGATGGAGATTAACATCATACAGGAAGCCCAGCAATaGGGGGACATCTCATTGCCACTTCACTCACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MMEINIIQEAQQ*GDISLPLHSPR Trigger: TCTTGGTGAGTGAAGTGGCAATGAGATGTCCCCCCATTGCTGGGCTTCCTGTATGATGTTAATCTCCATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR CCA 72 bp | CAGAAGTGGCTGGTGAATTTAAATCCCGGCCTTTGTTaGCCACTTTACACAGATGTAGTTCCCATCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QKWLVNLNPGLC*PLYTDVVPIQM Trigger: CATCTGGATGGGAACTACATCTGTGTAAAGTGGCCAACAAAGGCCGGGATTTAAATTCACCAGCCACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATACCAGCATGTACTCCTaGCTCTTTCTGGTAAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QPQCRYSILHFPETWVLYTSMYS*LFLVSG Trigger: CCCACTTACCAGAAAGAGCAAGGAGTACATGCTGGT...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR TCA 72 bp | ATACCAGGAATTGAAAAGATCAACCCTAGAGACCATTaGGTTAAACAACAGAGGAGAAGCCAGAGGACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: IPGIEKINPRDH*VKQQRRSQRTL Trigger: AAGGGTCCTCTGGCTTCTCCTCTGTTGTTTAACTCAATGGTCTCTAGGGTTGATCTTTTCAATTCCTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR GCA 72 bp | CTGGTCACATTTCAAAAGCTGACAAGGCATAGTTGTTaGCGTACAGTCATGTTCATGAACACTTTGTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LVTFQKLTRHSC*RTVMFMNTLYC Trigger: ACAGTACAAAGTGTTCATGAACATGACTGTACGGCAACAACTATGCCTTGTCAGCTTTTGAAATGTGACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATCTCCCCCTTGAACTTTaGCATCATGTAGGATTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QPQCRYSILHFPETWVLYLPLEL*HHVGFC Trigger: ACAAAATCCTACATGATGCAAAAGTTCAAGGGGGAG...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR CCA 72 bp | TGTAACTTCATGTACCCACAATCTGGAGTATGTGATTaGCTGACCCAGGTTTTGCAAATATTGGAACATTTC | + |
|
Preference number: 3 (lower is better) Translates to: CNFMYPQSGVCD*LTQVLQILEHF Trigger: GAAATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR TCA 72 bp | AAAAATTTAAAGGCATTAATTGGCTACTTGTCTCCCTaGACTCCAGAGGCCATGATGGAGATTAACATCATA | + |
|
Preference number: 3 (lower is better) Translates to: KNLKALIGYLSP*TPEAMMEINII Trigger: TATGATGTTAATCTCCATCATGGCCTCTGGAGTTCAGGGAGACAAGTAGCCAATTAATGCCTTTAAATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR TCA 72 bp | CCCCCTATTCAATTTATAATCCTGTTTGGGTCACTGTaGTTAGTTGCCATGGAAATTACCTTCTATGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PPIQFIILFGSL*LVAMEITFYGN Trigger: ATTTCCATAGAAGGTAATTTCCATGGCAACTAATCACAGTGACCCAAACAGGATTATAAATTGAATAGGGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR GCA 72 bp | TCTGTACCTAACAGCTTATTAATGGCTTCTGGAAACTaGTCTGGCCTTTACCTATACAATTACATAACATTA | + |
|
Preference number: 3 (lower is better) Translates to: SVPNSLLMASGN*SGLYLYNYITL Trigger: TAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTACAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCTGCAGCCATGCAAGCTaGCTGGGCCACCAGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSACSHAS*LGHQPA Trigger: TGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCA...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACTGCAGCCATGCAAGCTaGCTGGGCCACCAGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNCSHAS*LGHQPA Trigger: TGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCA...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCCCAGAGACCCCAGCCTaGGTTGCGCTGTCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSAPETPA*VALSLD Trigger: GTCCAAGGACAGCGCAACCCAGGCTGGGGTCTCTGG...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR CAA 72 bp | CAGCAGCCTGGAGCCTCCTTCCTTCAGTGTGATGGTTaGTGGTGCCCGTTAGGGCTTGGGAGGTCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQPGASFLQCDG*WCPLGLGRSWS Trigger: AGACCAGGACCTCCCAAGCCCTAACGGGCACCACAAACCATCACACTGAAGGAAGGAGGCTCCAGGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACATGCAGAAGGGCGGCTaGTCGGTAGGAGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNMQKGG*SVGGSG Trigger: CCCACTCCCTCCTACCGATCAGCCGCCCTTCTGCAT...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTTTCAGACCTGGTGCAAAGCTGCCCTCTGAGAACACAACTCCTCCAGCCAGAGACCCCAGCCTaGGTTGCGCTGTCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLVSDLVQSCPLRTQLLQPETPA*VALSLD Trigger: GTCCAAGGACAGCGCAACCCAGGCTGGGGTCTCTGG...CTGGAGGAGTTGTGTTCTCAGAGGGCAGCTTTGCACCAGGTCTGAAACCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCAGGCTTTCCAAACTTCTCCTTTTCCCATGAGGCTCTGGGAAGGAGGCATGCAGAAGGGCGGCTaGTCGGTAGGAGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEQAFQTSPFPMRLWEGGMQKGG*SVGGSG Trigger: CCCACTCCCTCCTACCGATCAGCCGCCCTTCTGCAT...GCCTCCTTCCCAGAGCCTCATGGGAAAAGGAGAAGTTTGGAAAGCCTGCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ACACCCGGAAGCCTTCCATGCCAGGTGACAGAGCAGGCTTTCCAAACTTCTCCTATCCGAAGGCGAAGATaGGGCTCCAGAGACCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSLPCQVTEQAFQTSPIRRRR*GSRDPS Trigger: GCTGGGGTCTCTGGAGCCTCATCTTCGCCTTCGGAT...AGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCATGCATCTGCAGCCATaGAAGCTGGCTGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSAMHLQP*KLAGPP Trigger: TGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCAT...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGATCCGAAGGCGAAGATaGGGCTCCAGAGACCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQIRRRR*GSRDPS Trigger: GCTGGGGTCTCTGGAGCCTCATCTTCGCCTTCGGAT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACGTGCCCAATGTCCGCTaGACTGTTCTTCCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNVPNVR*TVLPGR Trigger: CCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCAC...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGATGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTGCCGGCAGCACACGTTaGCATACAAGGGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGCWALSDTHGAIAIFLPAGSTR*HTREAK Trigger: TTTGGCTTCCCTTGTATGGCAACGTGTGCTGCCGGC...AGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCATCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ACACCCGGAAGCCTTCCATGCCAGGTGACAGAGCAGGCTTTCCAAACTTCTCCTTGGCAGGGAGAAGTTTaGGAGGGGCTGCCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPGSLPCQVTEQAFQTSPWQGEV*EGLPQV Trigger: AACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCA...AGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACTGGCAGGGAGAAGTTTaGGAGGGGCTGCCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNWQGEV*EGLPQV Trigger: AACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCA...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACGTGCCCAATGTCCGCTaGACTGTTCTTCCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLLALSGKWDAGPCLTHVPNVR*TVLPGR Trigger: CCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCAC...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACGCCGGCAGCACACGTTaGCATACAAGGGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNAGSTR*HTREAK Trigger: TTTGGCTTCCCTTGTATGGCAACGTGTGCTGCCGGC...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGATGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCCTGCAAATGCATCTaGAGCCATGCAAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGCWALSDTHGAIAIFLPSCKCI*SHASWL Trigger: CAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGA...AGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCATCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACCCTTGGAACTGGCACTaGCTTCGCATCAAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNPWNWH*LRIKAG Trigger: ACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGG...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCCCTGAGCTCCCATCCTaGATAAGCAAAAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSAPELPS*ISKRWR Trigger: TCGCCATCTTTTGCTTATTCAGGATGGGAGCTCAGG...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTTCCCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGGGACCCCAGCCTGGGTTaGGCTGTCCTTGGACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FSFSQEACSLLMSSQVHRDPSLG*AVLGLI Trigger: AATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTC...CCTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
||
| CDS-3UTR CCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGCCTTGGAACTGGCACTaGCTTCGCATCAAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQPWNWH*LRIKAG Trigger: ACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGG...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACCCTTGGAACTGGCACTaGCTTCGCATCAAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVLLALSGKWDAGPCLTHPWNWH*LRIKAG Trigger: ACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGG...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGTTCCCGTGGCTTTGCTaGTGGACGTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQFPWLC*WTSSAS Trigger: AGAAGCTGAAGACGTCCATCAGCAAAGCCACGGGAA...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGCTGGTTTCAGACCTGGTGCAAAGCTGCCCTCTGAGAACACAACTCCTTTCCCGTGGCTTTGCTaGTGGACGTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEAGFRPGAKLPSENTTPFPWLC*WTSSAS Trigger: AGAAGCTGAAGACGTCCATCAGCAAAGCCACGGGAA...AGGAGTTGTGTTCTCAGAGGGCAGCTTTGCACCAGGTCTGAAACCAGCCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATGTGCCCAATGTCCGCTaGACTGTTCTTCCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNVPNVR*TVLPGR Trigger: CCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCAC...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCGGTCCAGAATGTCTCTaGTGGATTTCTGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSAGPECL*WISALE Trigger: TTCCAAGGCAGAAATCCATCAGAGACATTCTGGACC...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACCCTAAATTCTTCCAGCGGCCTCTTCCTGGAGCGCTaGGCTGATTTTCCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTLNSSSGLFLER*ADFPSR Trigger: ACGGGAAGGAAAATCAGCGCAGCGCTCCAGGAAGAG...GCCGCTGGAAGAATTTAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACAGATCAAAGAAATGTTaGCGGAAGGCGCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNRSKKC*RKAPIH Trigger: GTGGATGGGCGCCTTCCGGCAACATTTCTTTGATCT...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ACACCCGGAAGCCTTCCATGCCAGGTGACAGAGCAGGCTTTCCAAACTTCTCCTGTTTTAGTGTCCGTGTaGCCAATGTCCGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSLPCQVTEQAFQTSPVLVSV*PMSAEL Trigger: CAGTTCAGCGGACATTGGGCACACGGACACTAAAAC...AGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGCCAGAGACCCCAGCCTaGGTTGCGCTGTCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGPETPA*VALSLD Trigger: GTCCAAGGACAGCGCAACCCAGGCTGGGGTCTCTGG...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGTCTTCTTTTGACTTCTaGAGCTCTGCCGTGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQSSFDF*SSAVYA Trigger: GGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGA...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATCTCTTCCTGGAGCGCTaGGCTGATTTTCCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNLFLER*ADFPSR Trigger: ACGGGAAGGAAAATCAGCGCAGCGCTCCAGGAAGAG...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACATGGTACTTTGCACCTaGCACAGAACCAGCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HVLLALSGKWDAGPCLTHMVLCT*HRTSEQ Trigger: TTGCTCGCTGGTTCTGTGGCAGGTGCAAAGTACCAT...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGGTTTTAGTGTCCGTGTaGCCAATGTCCGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQVLVSV*PMSAEL Trigger: CAGTTCAGCGGACATTGGGCACACGGACACTAAAAC...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGCTGGTTTCAGACCTGGTGCAAAGCTGCCCTCTGAGAACACAACTCCTTTTCTGCCTTGGAACTaGCACTGGCTTCGCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEAGFRPGAKLPSENTTPFLPWN*HWLRIK Trigger: CTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAA...AGGAGTTGTGTTCTCAGAGGGCAGCTTTGCACCAGGTCTGAAACCAGCCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACCATATCATAATACACTaGGGTCGCCTCCTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVLLALSGKWDAGPCLTHHIIIH*GRLLCQ Trigger: CTGGCAAAGGAGGCGACCTCAGTGTATTATGATATG...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGCATATCATAATACACTaGGGTCGCCTCCTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQHIIIH*GRLLCQ Trigger: CTGGCAAAGGAGGCGACCTCAGTGTATTATGATATG...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTTCCCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGGGTTTTAGTGTCCGTGTaGCCAATGTCCGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFSQEACSLLMSSQVHRVLVSV*PMSAEL Trigger: CAGTTCAGCGGACATTGGGCACACGGACACTAAAAC...CCTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
||
| CDS-3UTR CCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCTGCAGCCATGCAAGCTaGCTGGGCCACCAGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPCSHAS*LGHQPA Trigger: TGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCA...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGTTGGAGCCAAGATCGTaGGTCCAGAATGTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQLEPRS*VQNVSD Trigger: ATCAGAGACATTCTGGACCCACGATCTTGGCTCCAA...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCTGCATTCTTTATTACTaGAGTGATCGGAGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSACILYY*SDRSLS Trigger: GGAAAGACTCCGATCACTTCAGTAATAAAGAATGCA...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGACAGTGCATTTTCTTTaGATCCTTTTCCACGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQTVHFL*ILFHGL Trigger: CAGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATTGTCTTGTGCCCAGCGGCTGTGCTaGGGACAGAGAAACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQLNKGEGSLTALSCAQRLC*GQRNSA Trigger: TGCACTGTTTCTCTGTCCTCAGCACAGCCGCTGGGC...ACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACGCCCAGCGGCTGTGCTaGGGACAGAGAAACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYAQRLC*GQRNSA Trigger: TGCACTGTTTCTCTGTCCTCAGCACAGCCGCTGGGC...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCAGGTGGTTTTCGTGGTaGCATAATCTCAATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSARWFSW*HNLNSH Trigger: ATGAGAATTGAGATTATGTCACCACGAAAACCACCT...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCACACTTTCTTCTCTATaGCCATTTCGTGATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CWALSDTHGAIAIFLPSATLSSL*PFRDCH Trigger: ATGGCAATCACGAAATGGTCATAGAGAAGAAAGTGT...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACGGGCGATCTTTCCTCTaGAGGATTCTCCTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HVLLALSGKWDAGPCLTHGRSFL*RILLLY Trigger: ATAAAGAAGGAGAATCCTGCAGAGGAAAGATCGCCC...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGCTGGTTTCAGACCTGGTGCAAAGCTGCCCTCTGAGAACACAACTCCTGGGCGATCTTTCCTCTaGAGGATTCTCCTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KEAGFRPGAKLPSENTTPGRSFL*RILLLY Trigger: ATAAAGAAGGAGAATCCTGCAGAGGAAAGATCGCCC...AGGAGTTGTGTTCTCAGAGGGCAGCTTTGCACCAGGTCTGAAACCAGCCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGGCCGGCAGCACACGTTaGCATACAAGGGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGAGSTR*HTREAK Trigger: TTTGGCTTCCCTTGTATGGCAACGTGTGCTGCCGGC...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATATGCAGCCATGCAAGCTaGCTGGGCCACCAGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPICSHAS*LGHQPA Trigger: TGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCA...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATTTTCTGCCTTGGAACTaGCACTGGCTTCGCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNFLPWN*HWLRIK Trigger: CTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAA...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATTCCTTTTCCACGGCCTaGATTCTGGTTTCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNSFSTA*ILVSLS Trigger: TGACAAGGAAACCAGAATTCAGGCCGTGGAAAAGGA...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCGCCCAGCGGCTGTGCTaGGGACAGAGAAACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPAQRLC*GQRNSA Trigger: TGCACTGTTTCTCTGTCCTCAGCACAGCCGCTGGGC...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACACACTTTCTTCTCTATaGCCATTTCGTGATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNTLSSL*PFRDCH Trigger: ATGGCAATCACGAAATGGTCATAGAGAAGAAAGTGT...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATATGCAGAAGGGCGGCTaGTCGGTAGGAGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPQCRYSILHFPETWVLYMQKGG*SVGGSG Trigger: CCCACTCCCTCCTACCGATCAGCCGCCCTTCTGCAT...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAATGCAGAAGGGCGGCTaGTCGGTAGGAGGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIMQKGG*SVGGSG Trigger: CCCACTCCCTCCTACCGATCAGCCGCCCTTCTGCAT...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATTGTCTTGTATGCATCTGCAGCCATaGAAGCTGGCTGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQLNKGEGSLTALSCMHLQP*KLAGPP Trigger: TGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCAT...ACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGTTTCAGACCTGGTGCAAAGCTGCCCTCTGAGAACACAACTCCTCCAGTTCATTAAGGAATCCTaGAAATGCATCTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLVSDLVQSCPLRTQLLQFIKES*KCICSH Trigger: ATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAA...CTGGAGGAGTTGTGTTCTCAGAGGGCAGCTTTGCACCAGGTCTGAAACCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AAACTTCTCCTTTTCCCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCAAGATCAAAGAAATGTTaGCGGAAGGCGCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLLLFPRSMLLADEQPSPRSKKC*RKAPIH Trigger: GTGGATGGGCGCCTTCCGGCAACATTTCTTTGATCT...TGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACAGTTCTTCACAACAATaGTTCCATTGGCTGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNSSSQQ*FHWLRS Trigger: TGATCTCAGCCAATGGAAGCATTGTTGTGAAGAACT...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ACACCCGGAAGCCTTCCATGCCAGGTGACAGAGCAGGCTTTCCAAACTTCTCCTTCACGGGTGAATCGATaGTCATATCATAATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGSLPCQVTEQAFQTSPSRVNR*SYHNTL Trigger: CAGTGTATTATGATATGAGCATCGATTCACCCGTGA...AGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACGACCCCAGCCTGGGTTaGGCTGTCCTTGGACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYDPSLG*AVLGLI Trigger: AATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTC...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATACCAGAGACCCCAGCCTaGGTTGCGCTGTCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIPETPA*VALSLD Trigger: GTCCAAGGACAGCGCAACCCAGGCTGGGGTCTCTGG...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCCCAGAGACCCCAGCCTaGGTTGCGCTGTCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLPETPA*VALSLD Trigger: GTCCAAGGACAGCGCAACCCAGGCTGGGGTCTCTGG...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR CAA 72 bp | TTTCCAAACTTCTCCTTTTCCCAAGAAGCATGCTCCTaGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPNFSFSQEACS*LMSSQVHRISG Trigger: CCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAAGTTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
||
| 3UTR CAA 72 bp | TTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTaGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFSSHLKTSMYS*LFLVSGMLGPV Trigger: GACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGTGCATTCTTTATTACTaGAGTGATCGGAGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQCILYY*SDRSLS Trigger: GGAAAGACTCCGATCACTTCAGTAATAAAGAATGCA...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATACAGTGCATTTTCTTTaGATCCTTTTCCACGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNTVHFL*ILFHGL Trigger: CAGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGT...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCGCCCAGCGGCTGTGCTaGGGACAGAGAAACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITAQRLC*GQRNSA Trigger: TGCACTGTTTCTCTGTCCTCAGCACAGCCGCTGGGC...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCATCCGAAGGCGAAGATaGGGCTCCAGAGACCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITIRRRR*GSRDPS Trigger: GCTGGGGTCTCTGGAGCCTCATCTTCGCCTTCGGAT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCATCCGAAGGCGAAGATaGGGCTCCAGAGACCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLIRRRR*GSRDPS Trigger: GCTGGGGTCTCTGGAGCCTCATCTTCGCCTTCGGAT...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATGGGCGATCTTTCCTCTaGAGGATTCTCCTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNGRSFL*RILLLY Trigger: ATAAAGAAGGAGAATCCTGCAGAGGAAAGATCGCCC...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACCTCTTCCTGGAGCGCTaGGCTGATTTTCCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYLFLER*ADFPSR Trigger: ACGGGAAGGAAAATCAGCGCAGCGCTCCAGGAAGAG...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATATCACTGCCATTCACTGGAAGAATTGTAAACACCCGGAAGCCTTCCATGCCCAGCAAATGGTACTTTaGACCTGCCACAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NITAIHWKNCKHPEAFHAQQMVL*TCHRTS Trigger: GCTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTG...GGCATGGAAGGCTTCCGGGTGTTTACAATTCTTCCAGTGAATGGCAGTGATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTGATTGGCTGACCGCCGGCAGCACACGTTaGCATACAAGGGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGFCNFMYPQSGVCDWLTAGSTR*HTREAK Trigger: TTTGGCTTCCCTTGTATGGCAACGTGTGCTGCCGGC...GGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATGCATCTGCAGCCATaGAAGCTGGCTGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPMHLQP*KLAGPP Trigger: TGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCAT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGAGATCAAAGAAATGTTaGCGGAAGGCGCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGRSKKC*RKAPIH Trigger: GTGGATGGGCGCCTTCCGGCAACATTTCTTTGATCT...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACCCTAAATTCTTCCAGCGGCAACTTGCACACGAAATCAGAAGTAGATCAAAGAAATGTTaGCGGAAGGCGCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: THTHPKFFQRQLAHEIRSRSKKC*RKAPIH Trigger: GTGGATGGGCGCCTTCCGGCAACATTTCTTTGATCT...ACTTCTGATTTCGTGTGCAAGTTGCCGCTGGAAGAATTTAGGGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGAGTTCTTCACAACAATaGTTCCATTGGCTGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQSSSQQ*FHWLRS Trigger: TGATCTCAGCCAATGGAAGCATTGTTGTGAAGAACT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTAAGTGACCCCAGCCTGGGTTaGGCTGTCCTTGGACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FFSSHLKTSMYSLLFLVSDPSLG*AVLGLI Trigger: AATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTC...ACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCTGGCAGGGAGAAGTTTaGGAGGGGCTGCCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPWQGEV*EGLPQV Trigger: AACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCA...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACCAACAATGCTTCCATTaGCTGAGATCAAAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RGEARGPLDANSRKRRGNQQCFH*LRSKKC Trigger: ACATTTCTTTGATCTCAGCCAATGGAAGCATTGTTG...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTTTCAGACCTGGTGCAAAGCTGCCCTCTGAGAACACAACTCCTCCAGCAACAATGCTTCCATTaGCTGAGATCAAAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RLVSDLVQSCPLRTQLLQQQCFH*LRSKKC Trigger: ACATTTCTTTGATCTCAGCCAATGGAAGCATTGTTG...CTGGAGGAGTTGTGTTCTCAGAGGGCAGCTTTGCACCAGGTCTGAAACCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGCTGAACTGTTCTTCCTaGCAGGGAGAAGTTTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGLNCSS*QGEVCE Trigger: CTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAG...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTTTCCCGTGGCTTTGCTaGTGGACGTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFLLFSSENQHVLLALSGFPWLC*WTSSAS Trigger: AGAAGCTGAAGACGTCCATCAGCAAAGCCACGGGAA...ACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATAATGCTTCCATTGGCTaGGATCAAAGAAATGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNNASIG*DQRNVA Trigger: GGCAACATTTCTTTGATCTCAGCCAATGGAAGCATT...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGCATATCATAATACACTaGGGTCGCCTCCTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGHIIIH*GRLLCQ Trigger: CTGGCAAAGGAGGCGACCTCAGTGTATTATGATATG...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCGTGCCCAATGTCCGCTaGACTGTTCTTCCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLVPNVR*TVLPGR Trigger: CCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCAC...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGATATTCCTTCTCGCATaGGGATCTCTAAGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQIFLLA*GSLSLF Trigger: AAATAGACTTAGAGATCCGCATGCGAGAAGGAATAT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCGCCGGCAGCACACGTTaGCATACAAGGGAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPAGSTR*HTREAK Trigger: TTTGGCTTCCCTTGTATGGCAACGTGTGCTGCCGGC...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCATGCATCTGCAGCCATaGAAGCTGGCTGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITMHLQP*KLAGPP Trigger: TGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCAT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATTGTCTTGTTCCTGCAAATGCATCTaGAGCCATGCAAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQLNKGEGSLTALSCSCKCI*SHASWL Trigger: CAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGA...ACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACTCCTGCAAATGCATCTaGAGCCATGCAAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYSCKCI*SHASWL Trigger: CAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGA...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTTCCCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGGTTCATTAAGGAATCCTaGAAATGCATCTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFSQEACSLLMSSQVHRFIKES*KCICSH Trigger: ATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAA...CCTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAGACCCCAGCCTGGGTTaGGCTGTCCTTGGACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIDPSLG*AVLGLI Trigger: AATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTC...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCTGGCAGGGAGAAGTTTaGGAGGGGCTGCCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITWQGEV*EGLPQV Trigger: AACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCA...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATATGGCAGGGAGAAGTTTaGGAGGGGCTGCCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIWQGEV*EGLPQV Trigger: AACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCA...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGCAGCAAATGGTACTTTaGACCCAGAACTGCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGQQMVL*TQNCRT Trigger: GGTTCTGCAGTTCTGGGTGCAAAGTACCATTTGCTG...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105437.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATTGTCTTGTGATGGATTTCTGCCTTaGAACTGGCACTGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQLNKGEGSLTALSCDGFLP*NWHWLR Trigger: GCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATC...ACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATTGCATTCTTTATTACTaGAGTGATCGGAGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNCILYY*SDRSLS Trigger: GGAAAGACTCCGATCACTTCAGTAATAAAGAATGCA...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCTTCCCGTGGCTTTGCTaGTGGACGTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPFPWLC*WTSSAS Trigger: AGAAGCTGAAGACGTCCATCAGCAAAGCCACGGGAA...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACCCTAAATTCTTCCAGCGGCAACTTGCACACGAAATCAGAAGTACAGTGCATTTTCTTTaGATCCTTTTCCACGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: THTHPKFFQRQLAHEIRSTVHFL*ILFHGL Trigger: CAGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGT...ACTTCTGATTTCGTGTGCAAGTTGCCGCTGGAAGAATTTAGGGTGTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTTTCCCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGGATATTCCTTCTCGCATaGGGATCTCTAAGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFSQEACSLLMSSQVHRIFLLA*GSLSLF Trigger: AAATAGACTTAGAGATCCGCATGCGAGAAGGAATAT...CCTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGGAAAAGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068994.14 |
||
| CDS-3UTR GCA 90 bp | CCACAATCTGGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATTGGAACATTCTTCTTTTGACTTCTaGAGCTCTGCCGTGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQSGVCDWLTQVLQILEHSSFDF*SSAVYA Trigger: GGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGA...ATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATCTCTTCCTGGAGCGCTaGGCTGATTTTCCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QPQCRYSILHFPETWVLYLFLER*ADFPSR Trigger: ACGGGAAGGAAAATCAGCGCAGCGCTCCAGGAAGAG...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTGATTGGCTGACCATGGTACTTTGCACCTaGCACAGAACCAGCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGFCNFMYPQSGVCDWLTMVLCT*HRTSEQ Trigger: TTGCTCGCTGGTTCTGTGGCAGGTGCAAAGTACCAT...GGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTGATTGGCTGACCCAGCAAATGGTACTTTaGACCTGCCACAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGFCNFMYPQSGVCDWLTQQMVL*TCHRTS Trigger: GCTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTG...GGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACCAGCAAATGGTACTTTaGACCTGCCACAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYQQMVL*TCHRTS Trigger: GCTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTG...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATTTCATTAAGGAATCCTaGAAATGCATCTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLADEQPSPQDFRAHQGNFIKES*KCICSH Trigger: ATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAA...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACCCTAAATTCTTCCAGCGGCAGACCTTTTCCTGTTTaGTGTTCATTAAGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTLNSSSGRPFPV*CSLRNP Trigger: AGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCT...GCCGCTGGAAGAATTTAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACAGGACAGAGAAACAGTaGATTTTCTTTGAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVLLALSGKWDAGPCLTHRTEKQ*IFFESF Trigger: AAAGGATTCAAAGAAAATGCACTGTTTCTCTGTCCT...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGAGGACAGAGAAACAGTaGATTTTCTTTGAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLHSPRSMLLADEQPSPQRTEKQ*IFFESF Trigger: AAAGGATTCAAAGAAAATGCACTGTTTCTCTGTCCT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACTCTCTGATGGATTTCTaGCTTGGAACTGGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYSLMDF*LGTGTG Trigger: GCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGA...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | CCACAATCTGGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATTGGAACATCTGAACTGTTCTTCCTaGCAGGGAGAAGTTTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQSGVCDWLTQVLQILEHLNCSS*QGEVCE Trigger: CTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAG...ATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATCCTTGGAACTGGCACTaGCTTCGCATCAAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPQCRYSILHFPETWVLYPWNWH*LRIKAG Trigger: ACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGG...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATACCTTGGAACTGGCACTaGCTTCGCATCAAGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIPWNWH*LRIKAG Trigger: ACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGG...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACTTTCTGCCTTGGAACTaGCACTGGCTTCGCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYFLPWN*HWLRIK Trigger: CTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAA...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCGATGGATTTCTGCCTTaGAACTGGCACTGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPDGFLP*NWHWLR Trigger: GCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATC...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR CAA 72 bp | TCAGAAGTGGCTGGTGAATTTAAATCCCGGCCTTTGTaGGCCACTTTACACAGATGTAGTTCCCATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SEVAGEFKSRPL*ATLHRCSSHPD Trigger: ATCTGGATGGGAACTACATCTGTGTAAAGTGGCCAACAAAGGCCGGGATTTAAATTCACCAGCCACTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCCCTGAGCTCCCATCCTaGATAAGCAAAAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPPELPS*ISKRWR Trigger: TCGCCATCTTTTGCTTATTCAGGATGGGAGCTCAGG...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTCCCGTGGCTTTGCTaGTGGACGTCTTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLFPWLC*WTSSAS Trigger: AGAAGCTGAAGACGTCCATCAGCAAAGCCACGGGAA...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACTCCTTTTCCACGGCCTaGATTCTGGTTTCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYSFSTA*ILVSLS Trigger: TGACAAGGAAACCAGAATTCAGGCCGTGGAAAAGGA...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACGGTCCAGAATGTCTCTaGTGGATTTCTGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYGPECL*WISALE Trigger: TTCCAAGGCAGAAATCCATCAGAGACATTCTGGACC...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATTGTCTTGTGGTCCAGAATGTCTCTaGTGGATTTCTGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQLNKGEGSLTALSCGPECL*WISALE Trigger: TTCCAAGGCAGAAATCCATCAGAGACATTCTGGACC...ACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCTCTTCTTTTGACTTCTaGAGCTCTGCCGTGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPSSFDF*SSAVYA Trigger: GGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGA...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCTCCTGCAAATGCATCTaGAGCCATGCAAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITSCKCI*SHASWL Trigger: CAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGA...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTCCTGCAAATGCATCTaGAGCCATGCAAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLSCKCI*SHASWL Trigger: CAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGA...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCGTTTTAGTGTCCGTGTaGCCAATGTCCGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPVLVSV*PMSAEL Trigger: CAGTTCAGCGGACATTGGGCACACGGACACTAAAAC...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTAAGTTCTCTGATGGATTTCTaGCTTGGAACTGGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFSSHLKTSMYSLLFLVSSLMDF*LGTGTG Trigger: GCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGA...ACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTGATTGGCTGACCACTTCTATCTTTATCTaGAAGTCCGGTCCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGFCNFMYPQSGVCDWLTTSIFI*KSGPAS Trigger: CGAGGCAGGACCGGACTTCCAGATAAAGATAGAAGT...GGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACACTTCTATCTTTATCTaGAAGTCCGGTCCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYTSIFI*KSGPAS Trigger: CGAGGCAGGACCGGACTTCCAGATAAAGATAGAAGT...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | CCACAATCTGGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATTGGAACATTTTCCAAGGTCAGGGTaGTATGAGCCAGCAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQSGVCDWLTQVLQILEHFPRSG*YEPANG Trigger: ACCATTTGCTGGCTCATACCACCCTGACCTTGGAAA...ATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTAAGTCTGAACTGTTCTTCCTaGCAGGGAGAAGTTTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFSSHLKTSMYSLLFLVSLNCSS*QGEVCE Trigger: CTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAG...ACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAGATGGATTTCTGCCTTaGAACTGGCACTGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIDGFLP*NWHWLR Trigger: GCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATC...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCGATGGATTTCTGCCTTaGAACTGGCACTGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLDGFLP*NWHWLR Trigger: GCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATC...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCGATGGATTTCTGCCTTaGAACTGGCACTGGCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITDGFLP*NWHWLR Trigger: GCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATC...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACTTGGAGCCAAGATCGTaGGTCCAGAATGTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYLEPRS*VQNVSD Trigger: ATCAGAGACATTCTGGACCCACGATCTTGGCTCCAA...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTGATTGGCTGACCTTGGAGCCAAGATCGTaGGTCCAGAATGTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGFCNFMYPQSGVCDWLTLEPRS*VQNVSD Trigger: ATCAGAGACATTCTGGACCCACGATCTTGGCTCCAA...GGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR CAA 72 bp | AAGTGTAGAGCACAGAATAAACCTTACTTACTGCGTTaGATAATGGGCTGTATGGACCCCACTTCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KCRAQNKPYLLR*IMGCMDPTSVA Trigger: TGCCACTGAAGTGGGGTCCATACAGCCCATTATCAAACGCAGTAAGTAAGGTTTATTCTGTGCTCTACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| 3UTR CAA 72 bp | AAAGCGATGAATGGGTTGGTCCGATCAATACCTTTGTaGGCCACTTTACACAGATGTAGTTCCCATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAMNGLVRSIPL*ATLHRCSSHPD Trigger: ATCTGGATGGGAACTACATCTGTGTAAAGTGGCCAACAAAGGTATTGATCGGACCAACCCATTCATCGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 |
||
| 3UTR CAA 72 bp | AAATCAGAAGTGGCTGGTGAATTTAAATCCCGGCCTTaGTTGGCCACTTTACACAGATGTAGTTCCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSEVAGEFKSRP*LATLHRCSSHP Trigger: TGGATGGGAACTACATCTGTGTAAAGTGGCCAACAAAGGCCGGGATTTAAATTCACCAGCCACTTCTGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| 3UTR CAA 72 bp | ACACACACACACACCCTAAATTCTTCCAGCGGCAACTaGCACACGAAATCAGAAGTGGCTGGTGAATTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTLNSSSGN*HTKSEVAGEFK Trigger: TTTAAATTCACCAGCCACTTCTGATTTCGTGTGCAAGTTGCCGCTGGAAGAATTTAGGGTGTGTGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGTGCATTCTTTATTACTaGAGTGATCGGAGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGCILYY*SDRSLS Trigger: GGAAAGACTCCGATCACTTCAGTAATAAAGAATGCA...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATCCTGAGCTCCCATCCTaGATAAGCAAAAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QPQCRYSILHFPETWVLYPELPS*ISKRWR Trigger: TCGCCATCTTTTGCTTATTCAGGATGGGAGCTCAGG...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCCTGAGCTCCCATCCTaGATAAGCAAAAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITPELPS*ISKRWR Trigger: TCGCCATCTTTTGCTTATTCAGGATGGGAGCTCAGG...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATATCTTCTTTTGACTTCTaGAGCTCTGCCGTGTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPISSFDF*SSAVYA Trigger: GGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGA...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCATGGTACTTTGCACCTaGCACAGAACCAGCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITMVLCT*HRTSEQ Trigger: TTGCTCGCTGGTTCTGTGGCAGGTGCAAAGTACCAT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAATGGTACTTTGCACCTaGCACAGAACCAGCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIMVLCT*HRTSEQ Trigger: TTGCTCGCTGGTTCTGTGGCAGGTGCAAAGTACCAT...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCAGCAAATGGTACTTTaGACCTGCCACAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITQQMVL*TCHRTS Trigger: GCTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTG...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAAGATCAAAGAAATGTTaGCGGAAGGCGCCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIRSKKC*RKAPIH Trigger: GTGGATGGGCGCCTTCCGGCAACATTTCTTTGATCT...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGTCACGGGTGAATCGATaGTCATATCATAATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGSRVNR*SYHNTL Trigger: CAGTGTATTATGATATGAGCATCGATTCACCCGTGA...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCTCTCTGATGGATTTCTaGCTTGGAACTGGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITSLMDF*LGTGTG Trigger: GCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGA...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATTCTCTGATGGATTTCTaGCTTGGAACTGGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPQCRYSILHFPETWVLYSLMDF*LGTGTG Trigger: GCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGA...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCCTGAACTGTTCTTCCTaGCAGGGAGAAGTTTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLLNCSS*QGEVCE Trigger: CTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAG...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATACTGAACTGTTCTTCCTaGCAGGGAGAAGTTTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPILNCSS*QGEVCE Trigger: CTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAG...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTCTGCCTTGGAACTaGCACTGGCTTCGCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLFLPWN*HWLRIK Trigger: CTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAA...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCTTTCTGCCTTGGAACTaGCACTGGCTTCGCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITFLPWN*HWLRIK Trigger: CTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAA...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTAAGTTTGGAGCCAAGATCGTaGGTCCAGAATGTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FFSSHLKTSMYSLLFLVSLEPRS*VQNVSD Trigger: ATCAGAGACATTCTGGACCCACGATCTTGGCTCCAA...ACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCACAGTGCATTTTCTTTaGATCCTTTTCCACGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPTVHFL*ILFHGL Trigger: CAGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTGATTGGCTGACCAATGCTTCCATTGGCTaGGATCAAAGAAATGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGFCNFMYPQSGVCDWLTNASIG*DQRNVA Trigger: GGCAACATTTCTTTGATCTCAGCCAATGGAAGCATT...GGTCAGCCAATCACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATGCTTCCATTGGCTaGGATCAAAGAAATGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYNASIG*DQRNVA Trigger: GGCAACATTTCTTTGATCTCAGCCAATGGAAGCATT...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATATCATAATACACTaGGGTCGCCTCCTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITHIIIH*GRLLCQ Trigger: CTGGCAAAGGAGGCGACCTCAGTGTATTATGATATG...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATACATATCATAATACACTaGGGTCGCCTCCTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIHIIIH*GRLLCQ Trigger: CTGGCAAAGGAGGCGACCTCAGTGTATTATGATATG...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAGGTCCAGAATGTCTCTaGTGGATTTCTGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIGPECL*WISALE Trigger: TTCCAAGGCAGAAATCCATCAGAGACATTCTGGACC...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGAGACCTTTTCCTGTTTaGTGTTCATTAAGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGRPFPV*CSLRNP Trigger: AGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCT...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCACTTCTATCTTTATCTaGAAGTCCGGTCCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITTSIFI*KSGPAS Trigger: CGAGGCAGGACCGGACTTCCAGATAAAGATAGAAGT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CCA 90 bp | AATATCACTGCCATTCACTGGAAGAATTGTAAACACCCGGAAGCCTTCCATGCCCAACAATGCTTCCATTaGCTGAGATCAAAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NITAIHWKNCKHPEAFHAQQCFH*LRSKKC Trigger: ACATTTCTTTGATCTCAGCCAATGGAAGCATTGTTG...GGCATGGAAGGCTTCCGGGTGTTTACAATTCTTCCAGTGAATGGCAGTGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGCAACAATGCTTCCATTaGCTGAGATCAAAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGQQCFH*LRSKKC Trigger: ACATTTCTTTGATCTCAGCCAATGGAAGCATTGTTG...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCTTGGAGCCAAGATCGTaGGTCCAGAATGTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITLEPRS*VQNVSD Trigger: ATCAGAGACATTCTGGACCCACGATCTTGGCTCCAA...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGCATCATGTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTTCCTTTTCCACGGCCTaGATTCTGGTTTCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHHVGFCNFMYPQSGVCSFSTA*ILVSLS Trigger: TGACAAGGAAACCAGAATTCAGGCCGTGGAAAAGGA...ACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTACATGATGCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| CDS-3UTR TCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCACAGTGCATTTTCTTTaGATCCTTTTCCACGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITTVHFL*ILFHGL Trigger: CAGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCAATGCTTCCATTGGCTaGGATCAAAGAAATGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPNASIG*DQRNVA Trigger: GGCAACATTTCTTTGATCTCAGCCAATGGAAGCATT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCGGGCGATCTTTCCTCTaGAGGATTCTCCTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLGRSFL*RILLLY Trigger: ATAAAGAAGGAGAATCCTGCAGAGGAAAGATCGCCC...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCGGGCGATCTTTCCTCTaGAGGATTCTCCTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITGRSFL*RILLLY Trigger: ATAAAGAAGGAGAATCCTGCAGAGGAAAGATCGCCC...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CCACAATCTGGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATTGGAACATAGTTCTTCACAACAATaGTTCCATTGGCTGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PQSGVCDWLTQVLQILEHSSSQQ*FHWLRS Trigger: TGATCTCAGCCAATGGAAGCATTGTTGTGAAGAACT...ATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| CDS-3UTR GCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAGTTCTTCACAACAATaGTTCCATTGGCTGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYSSSQQ*FHWLRS Trigger: TGATCTCAGCCAATGGAAGCATTGTTGTGAAGAACT...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CCA 90 bp | CTTTTGCATCATGTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTACTTCTATCTTTATCTaGAAGTCCGGTCCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLHHVGFCNFMYPQSGVCTSIFI*KSGPAS Trigger: CGAGGCAGGACCGGACTTCCAGATAAAGATAGAAGT...ACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTACATGATGCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCAGGTGGTTTTCGTGGTaGCATAATCTCAATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPRWFSW*HNLNSH Trigger: ATGAGAATTGAGATTATGTCACCACGAAAACCACCT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR TCA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCACACTTTCTTCTCTATaGCCATTTCGTGATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MASGNCSGLYLYNYITLPTLSSL*PFRDCH Trigger: ATGGCAATCACGAAATGGTCATAGAGAAGAAAGTGT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTAAGTACACTTTCTTCTCTATaGCCATTTCGTGATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFSSHLKTSMYSLLFLVSTLSSL*PFRDCH Trigger: ATGGCAATCACGAAATGGTCATAGAGAAGAAAGTGT...ACTTACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATTGTCTTGTATATTCCTTCTCGCATaGGGATCTCTAAGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQPQLNKGEGSLTALSCIFLLA*GSLSLF Trigger: AAATAGACTTAGAGATCCGCATGCGAGAAGGAATAT...ACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CCA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACCAACAATGCTTCCATTaGCTGAGATCAAAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VPNSLLMASGNCSGLYLYQQCFH*LRSKKC Trigger: ACATTTCTTTGATCTCAGCCAATGGAAGCATTGTTG...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTGCATTCTTTATTACTaGAGTGATCGGAGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLCILYY*SDRSLS Trigger: GGAAAGACTCCGATCACTTCAGTAATAAAGAATGCA...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGCATCATGTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTAATGCTTCCATTGGCTaGGATCAAAGAAATGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLHHVGFCNFMYPQSGVCNASIG*DQRNVA Trigger: GGCAACATTTCTTTGATCTCAGCCAATGGAAGCATT...ACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTACATGATGCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCAATGTAGATACAGCATCTTGCATTTTCCGGAAACATGGGTTTTATATAGGTGGTTTTCGTGGTaGCATAATCTCAATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPQCRYSILHFPETWVLYRWFSW*HNLNSH Trigger: ATGAGAATTGAGATTATGTCACCACGAAAACCACCT...ATATAAAACCCATGTTTCCGGAAAATGCAAGATGCTGTATCTACATTGAGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCAGGTGGTTTTCGTGGTaGCATAATCTCAATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLRWFSW*HNLNSH Trigger: ATGAGAATTGAGATTATGTCACCACGAAAACCACCT...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR TCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCACACTTTCTTCTCTATaGCCATTTCGTGATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITTLSSL*PFRDCH Trigger: ATGGCAATCACGAAATGGTCATAGAGAAGAAAGTGT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCTTCATTAAGGAATCCTaGAAATGCATCTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITFIKES*KCICSH Trigger: ATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAA...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTCATTAAGGAATCCTaGAAATGCATCTGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLFIKES*KCICSH Trigger: ATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAA...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAAGTTCTTCACAACAATaGTTCCATTGGCTGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPISSSQQ*FHWLRS Trigger: TGATCTCAGCCAATGGAAGCATTGTTGTGAAGAACT...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATATCACGGGTGAATCGATaGTCATATCATAATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPISRVNR*SYHNTL Trigger: CAGTGTATTATGATATGAGCATCGATTCACCCGTGA...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTCACGGGTGAATCGATaGTCATATCATAATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLSRVNR*SYHNTL Trigger: CAGTGTATTATGATATGAGCATCGATTCACCCGTGA...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| 3UTR CAA 72 bp | GGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATaGGAACATTTCGTCACACAATACAAAGAATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GVCDWLTQVLQI*EHFVTQYKESH Trigger: ATGTGATTCTTTGTATTGTGTGACGAAATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAATATTCCTTCTCGCATaGGGATCTCTAAGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGNCSGLYLYNYITLPIIFLLA*GSLSLF Trigger: AAATAGACTTAGAGATCCGCATGCGAGAAGGAATAT...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCATATTCCTTCTCGCATaGGGATCTCTAAGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITIFLLA*GSLSLF Trigger: AAATAGACTTAGAGATCCGCATGCGAGAAGGAATAT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCAGACCTTTTCCTGTTTaGTGTTCATTAAGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLRPFPV*CSLRNP Trigger: AGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCT...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCATCATGTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTAGACCTTTTCCTGTTTaGTGTTCATTAAGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHHVGFCNFMYPQSGVCRPFPV*CSLRNP Trigger: AGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCT...ACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTACATGATGCAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCAGGACAGAGAAACAGTaGATTTTCTTTGAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGFWKLLWPLPIQLHNITRTEKQ*IFFESF Trigger: AAAGGATTCAAAGAAAATGCACTGTTTCTCTGTCCT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS TCA 90 bp | GAGATGATGCGTAGGCGGCGACAGTCTGGGATCCGAAGGCGAAGATaGGGCTCCAGAGACCCCAGCCTGGGTTGCGCTGTCCTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: EMMRRRRQSGIRRRR*GSRDPSLGCAVLGL Trigger: CAGTCCAAGGACAGCGCAACCCAGGCTGGGGTCTCTGGAGCCTCATCTTCGCCTTCGGATCCCAGACTGTCGCCGCCTACGCATCATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS TCA 90 bp | CTGGCAGGGAGAAGTTTGCGAGGGGCTGCCACAGGTTTCTGGAGATaGTGCGTAGGCGGCGACAGTCTGGGATCCGAAGGCGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAGRSLRGAATGFWR*CVGGDSLGSEGEDE Trigger: CTCATCTTCGCCTTCGGATCCCAGACTGTCGCCGCCTACGCATCATCTCCAGAAACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 90 bp | GTACTTTGCACCCAGAACTGCAGAACCAGCGAGCAAGCACGCCTCTaGGCTCTCTTCCTGGAGCGCTGCGCTGATTTTCCTTCCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLCTQNCRTSEQARL*ALFLERCADFPSRG Trigger: GCCACGGGAAGGAAAATCAGCGCAGCGCTCCAGGAAGAGAGCCCAGAGGCGTGCTTGCTCGCTGGTTCTGCAGTTCTGGGTGCAAAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105437.8 |
||
| CDS GCA 90 bp | AGAACCAGCGAGCAAGCACGCCTCTGGGCTCTCTTCCTGGAGCGCTaGGCTGATTTTCCTTCCCGTGGCTTTGCTGATGGACGTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTSEQARLWALFLER*ADFPSRGFADGRLQ Trigger: CTGAAGACGTCCATCAGCAAAGCCACGGGAAGGAAAATCAGCGCAGCGCTCCAGGAAGAGAGCCCAGAGGCGTGCTTGCTCGCTGGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS TCA 90 bp | CTTCGCATCAAGGCTGGTTTTAGTGTCCGTGTGCCCAATGTCCGCTaGACTGTTCTTCCTGGCAGGGAGAAGTTTGCGAGGGGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRIKAGFSVRVPNVR*TVLPGREKFARGCH Trigger: GTGGCAGCCCCTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCACACGGACACTAAAACCAGCCTTGATGCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | CCACTTCACTCACCAAGAAGCATGCTCCTTGCTGATGAGCAGCCAAGTCCACAGAGACCCCAGCCTGGGTaGCGCTGTCCTTGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLHSPRSMLLADEQPSPQRPQPG*RCPWTD Trigger: ATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTCT...CTGTGGACTTGGCTGCTCATCAGCAAGGAGCATGCTTCTTGGTGAGTGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS TCA 90 bp | CATCCGGAGCCGGTTCGCCTATTGGGGACAACACTTTCTTCTCTATaGCCATTTCGTGATTGCCATCAAAGACAGCGGCCCACGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HPEPVRLLGTTLSSL*PFRDCHQRQRPTGV Trigger: CACCCCCGTGGGCCGCTGTCTTTGATGGCAATCACGAAATGGTCATAGAGAAGAAAGTGTTGTCCCCAATAGGCGAACCGGCTCCGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 90 bp | AGCATTTTCCAAGGTCAGGGTGGTATGAGCCAGCAAATGGTACTTTaGACCTGCCACAGAACCAGCGAGCAAGCACGCCTCTGGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SIFQGQGGMSQQMVL*TCHRTSEQARLWAL Trigger: GAGAGCCCAGAGGCGTGCTTGCTCGCTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTGGCTCATACCACCCTGACCTTGGAAAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 90 bp | CTGTTCATTAAGGAATCCTGCAAATGCATCTGCAGCCATGCAAGCTaGCTGGGCCACCAGCCGGCAGCACACGTTGCCATACAAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFIKESCKCICSHAS*LGHQPAAHVAIQGK Trigger: CTTCCCTTGTATGGCAACGTGTGCTGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGCCCTGTCTGACACACATGGGGCGATAGCAATCTTCCTTCCTTCAGCCCCAGCAAATGGTACTTaGCACCTGCCACAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWALSDTHGAIAIFLPSAPANGT*HLPQNQ Trigger: CTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTGG...GGCTGAAGGAAGGAAGATTGCTATCGCCCCATGTGTGTCAGACAGGGCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| CDS TCA 90 bp | TGTCAGCCGCAAAGATGTGACTCACCGCCCGCCCAGCGGCTGTGCTaGGGACAGAGAAACAGTGCATTTTCTTTGAATCCTTTTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: CQPQRCDSPPAQRLC*GQRNSAFSLNPFPR Trigger: CCGTGGAAAAGGATTCAAAGAAAATGCACTGTTTCTCTGTCCTCAGCACAGCCGCTGGGCGGGCGGTGAGTCACATCTTTGCGGCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS GCA 90 bp | GGAACTGGCACTGGCTTCGCATCAAGGCTGGTTTTAGTGTCCGTGTaGCCAATGTCCGCTGAACTGTTCTTCCTGGCAGGGAGAAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTGTGFASRLVLVSV*PMSAELFFLAGRSL Trigger: CAAACTTCTCCCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCACACGGACACTAAAACCAGCCTTGATGCGAAGCCAGTGCCAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 90 bp | AGCATTTTCCAAGGTCAGGGTGGTATGAGCCAGCAAATGGTACTTTaGACCCAGAACTGCAGAACCAGCGAGCAAGCACGCCTCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIFQGQGGMSQQMVL*TQNCRTSEQARLWA Trigger: AGCCCAGAGGCGTGCTTGCTCGCTGGTTCTGCAGTTCTGGGTGCAAAGTACCATTTGCTGGCTCATACCACCCTGACCTTGGAAAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105437.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACGAGATCAAAGAAATGTaGCCGGAAGGCGCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGEARGPLDANSRKRRGNEIKEM*PEGAHP Trigger: TGGATGGGCGCCTTCCGGCAACATTTCTTTGATCTC...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACCTGAGGTCGCCTCCTTaGCCAGGAACAAAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HVLLALSGKWDAGPCLTHLRSPP*PGTKVV Trigger: AACCACCTTTGTTCCTGGCAAAGGAGGCGACCTCAG...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| CDS GCA 90 bp | ACCTTTTCCTGTTTGCTGTTCATTAAGGAATCCTGCAAATGCATCTaGAGCCATGCAAGCTGGCTGGGCCACCAGCCGGCAGCACACGTT | + |
|
Preference number: 5 (lower is better) Translates to: TFSCLLFIKESCKCI*SHASWLGHQPAAHV Trigger: AACGTGTGCTGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAACAGCAAACAGGAAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 90 bp | AGATCGTGGGTCCAGAATGTCTCTGATGGATTTCTGCCTTGGAACTaGCACTGGCTTCGCATCAAGGCTGGTTTTAGTGTCCGTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSWVQNVSDGFLPWN*HWLRIKAGFSVRVP Trigger: GGGCACACGGACACTAAAACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGACATTCTGGACCCACGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | CATGTACTCCTTGCTCTTTCTGGTAAGTGGGATGCTGGGCCCTGTCTGACACACTCCGGTCCTGCCTCGTaGAAGATGGTGACATTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: HVLLALSGKWDAGPCLTHSGPAS*KMVTFS Trigger: CGAAAATGTCACCATCTTCAACGAGGCAGGACCGGA...GTGTGTCAGACAGGGCCCAGCATCCCACTTACCAGAAAGAGCAAGGAGTACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| CDS CCA 90 bp | TGGGTCCAGAATGTCTCTGATGGATTTCTGCCTTGGAACTGGCACTaGCTTCGCATCAAGGCTGGTTTTAGTGTCCGTGTGCCCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: WVQNVSDGFLPWNWH*LRIKAGFSVRVPNV Trigger: GACATTGGGCACACGGACACTAAAACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGACATTCTGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 90 bp | GAGCCAAGATCGTGGGTCCAGAATGTCTCTGATGGATTTCTGCCTTaGAACTGGCACTGGCTTCGCATCAAGGCTGGTTTTAGTGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: EPRSWVQNVSDGFLP*NWHWLRIKAGFSVR Trigger: ACGGACACTAAAACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGACATTCTGGACCCACGATCTTGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | AATATCACTGCCATTCACTGGAAGAATTGTAAACACCCGGAAGCCTTCCATGCCAGACCCCAGCCTGGGTaGCGCTGTCCTTGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NITAIHWKNCKHPEAFHARPQPG*RCPWTD Trigger: ATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTCT...GGCATGGAAGGCTTCCGGGTGTTTACAATTCTTCCAGTGAATGGCAGTGATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGAGACCCCAGCCTGGGTaGCGCTGTCCTTGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGRPQPG*RCPWTD Trigger: ATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTCT...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATTCCGGTCCTGCCTCGTaGAAGATGGTGACATTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLADEQPSPQDFRAHQGNSGPAS*KMVTFS Trigger: CGAAAATGTCACCATCTTCAACGAGGCAGGACCGGA...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATGAGATCAAAGAAATGTaGCCGGAAGGCGCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLADEQPSPQDFRAHQGNEIKEM*PEGAHP Trigger: TGGATGGGCGCCTTCCGGCAACATTTCTTTGATCTC...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | ACACCCGGAAGCCTTCCATGCCAGGTGACAGAGCAGGCTTTCCAAACTTCTCCTCAGACCTTTTCCTGTTaGCTGTTCATTAAGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TPGSLPCQVTEQAFQTSPQTFSC*LFIKES Trigger: GGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTG...AGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAGAAGCCAGAGGACCCTTAGATGCCAATTCCAGGAAGCGGAGGGGAAACCAGACCTTTTCCTGTTaGCTGTTCATTAAGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: RGEARGPLDANSRKRRGNQTFSC*LFIKES Trigger: GGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTG...GTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGGTCCTCTGGCTTCTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ACACCCGGAAGCCTTCCATGCCAGGTGACAGAGCAGGCTTTCCAAACTTCTCCTAACAGTGCATTTTCTTaGAATCCTTTTCCACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TPGSLPCQVTEQAFQTSPNSAFS*NPFPRP Trigger: AGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGTT...AGGAGAAGTTTGGAAAGCCTGCTCTGTCACCTGGCATGGAAGGCTTCCGGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAGACCCCAGCCTGGGTaGCGCTGTCCTTGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSLLMASGNCSGLYLYRPQPG*RCPWTD Trigger: ATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTCT...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATTTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLADEQPSPQDFRAHQGNLQSLL*TSAALP Trigger: CGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAA...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCAGGCTTTCCAAACTTCTCCTTTTCCCATGAGGCTCTGGGAAGGAGGCCAGACCTTTTCCTGTTaGCTGTTCATTAAGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TEQAFQTSPFPMRLWEGGQTFSC*LFIKES Trigger: GGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTG...GCCTCCTTCCCAGAGCCTCATGGGAAAAGGAGAAGTTTGGAAAGCCTGCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGGAGATCAAAGAAATGTaGCCGGAAGGCGCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGEIKEM*PEGAHP Trigger: TGGATGGGCGCCTTCCGGCAACATTTCTTTGATCTC...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCAGACCCCAGCCTGGGTaGCGCTGTCCTTGGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MASGNCSGLYLYNYITLPRPQPG*RCPWTD Trigger: ATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTCT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS TCA 90 bp | ACGTTGCCATACAAGGGAAGCCAAAAGGAACACTCCTCATCTCCGTaGACAGACAGGTTATGGGTCTTAAAGCAGTCTCCAGCATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPYKGSQKEHSSSP*TDRLWVLKQSPAFS Trigger: GGAAAATGCTGGAGACTGCTTTAAGACCCATAACCTGTCTGTTCACGGAGATGAGGAGTGTTCCTTTTGGCTTCCCTTGTATGGCAACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS TCA 90 bp | AGGACAGAGAAACAGTGCATTTTCTTTGAATCCTTTTCCACGGCCTaGATTCTGGTTTCCTTGTCAATAGGAACCACCAGAGCCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTEKQCIFFESFSTA*ILVSLSIGTTRAGS Trigger: GGAGCCGGCTCTGGTGGTTCCTATTGACAAGGAAACCAGAATTCAGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGTTTCTCTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS GCA 90 bp | AGAGCACAGTACAGCCTTCTCCAGCCAACCAGACCTTTTCCTGTTTaGTGTTCATTAAGGAATCCTGCAAATGCATCTGCAGCCATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RAQYSLLQPTRPFPV*CSLRNPANASAAMQ Trigger: TTGCATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTGGTTGGCTGGAGAAGGCTGTACTGTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTCTGAGGTCGCCTCCTTaGCCAGGAACAAAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CFLLFSSENQHVLLALSGLRSPP*PGTKVV Trigger: AACCACCTTTGTTCCTGGCAAAGGAGGCGACCTCAG...ACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACCTGAGGTCGCCTCCTTaGCCAGGAACAAAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSLLMASGNCSGLYLYLRSPP*PGTKVV Trigger: AACCACCTTTGTTCCTGGCAAAGGAGGCGACCTCAG...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCTGATGAGCAGCCAAGTCCACAGGATTTCAGGGCTCATCAAGGAAATATCCCGTGCTCCGGTTaGATTTGCAATCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLADEQPSPQDFRAHQGNIPCSG*ICNLFF Trigger: AAAGAAGAGATTGCAAATCAAACCGGAGCACGGGAT...ATTTCCTTGATGAGCCCTGAAATCCTGTGGACTTGGCTGCTCATCAGCAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105437.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACTCCGGTCCTGCCTCGTaGAAGATGGTGACATTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VPNSLLMASGNCSGLYLYSGPAS*KMVTFS Trigger: CGAAAATGTCACCATCTTCAACGAGGCAGGACCGGA...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATCTGGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATTGGAACATGAGATCAAAGAAATGTaGCCGGAAGGCGCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQSGVCDWLTQVLQILEHEIKEM*PEGAHP Trigger: TGGATGGGCGCCTTCCGGCAACATTTCTTTGATCTC...ATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTCTTCTCTTCTCATCTGAAAACCAGCATGTACTCCTTGCTCTTTCTGGTGAGATCAAAGAAATGTaGCCGGAAGGCGCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLLFSSENQHVLLALSGEIKEM*PEGAHP Trigger: TGGATGGGCGCCTTCCGGCAACATTTCTTTGATCTC...ACCAGAAAGAGCAAGGAGTACATGCTGGTTTTCAGATGAGAAGAGAAGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS GCA 90 bp | TGCGCTGCAGCTGTAGACTTCTATCTTTATCTGGAAGTCCGGTCCTaGCTCGTTGAAGATGGTGACATTTTCGAAACATATATCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CAAAVDFYLYLEVRS*LVEDGDIFETYICD Trigger: GTCACAGATATATGTTTCGAAAATGTCACCATCTTCAACGAGGCAGGACCGGACTTCCAGATAAAGATAGAAGTCTACAGCTGCAGCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCCCAGCAAATGGTACTTaGCACCTGCCACAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: MASGNCSGLYLYNYITLPPANGT*HLPQNQ Trigger: CTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTGG...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCTGAGGTCGCCTCCTTaGCCAGGAACAAAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NGFWKLLWPLPIQLHNITLRSPP*PGTKVV Trigger: AACCACCTTTGTTCCTGGCAAAGGAGGCGACCTCAG...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCCTGAGGTCGCCTCCTTaGCCAGGAACAAAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLLRSPP*PGTKVV Trigger: AACCACCTTTGTTCCTGGCAAAGGAGGCGACCTCAG...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACTTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VPNSLLMASGNCSGLYLYLQSLL*TSAALP Trigger: CGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAA...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCTCCGGTCCTGCCTCGTaGAAGATGGTGACATTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: NGFWKLLWPLPIQLHNITSGPAS*KMVTFS Trigger: CGAAAATGTCACCATCTTCAACGAGGCAGGACCGGA...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATATCCGGTCCTGCCTCGTaGAAGATGGTGACATTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASGNCSGLYLYNYITLPISGPAS*KMVTFS Trigger: CGAAAATGTCACCATCTTCAACGAGGCAGGACCGGA...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCCCAGCAAATGGTACTTaGCACCTGCCACAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLPANGT*HLPQNQ Trigger: CTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTGG...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | TTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCTTTTGCTCCGGGACAACAATGCTTCCATaGGCTGAGATCAAAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LTLPKSRLLSRNCLFCSGTTMLP*AEIKEM Trigger: CATTTCTTTGATCTCAGCCAATGGAAGCATTGTTGT...CCCGGAGCAAAAGAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACATCCCGTGCTCCGGTTaGATTTGCAATCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSLLMASGNCSGLYLYIPCSG*ICNLFF Trigger: AAAGAAGAGATTGCAAATCAAACCGGAGCACGGGAT...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000147556.8 |
||
| CDS TCA 90 bp | AAGCAAAAGATGGCGAAGCGCTGTGTGCATTCTTTATTACTGAAGTaGTCGGAGTCTTTCCACATTAATGGTATTCGGATATCTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQKMAKRCVHSLLLK*SESFHINGIRISDR Trigger: CCTGTCAGATATCCGAATACCATTAATGTGGAAAGACTCCGATCACTTCAGTAATAAAGAATGCACACAGCGCTTCGCCATCTTTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS GCA 90 bp | TTTGTATTATGTCTGTTACACTTTCCAGTTTCACGGGTGAATCGATaGTCATATCATAATACACTGAGGTCGCCTCCTTTGCCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FVLCLLHFPVSRVNR*SYHNTLRSPPLPGT Trigger: TGTTCCTGGCAAAGGAGGCGACCTCAGTGTATTATGATATGAGCATCGATTCACCCGTGAAACTGGAAAGTGTAACAGACATAATACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATATTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASGNCSGLYLYNYITLPILQSLL*TSAALP Trigger: CGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAA...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATCTGGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATTGGAACATGTGCTCCGGTTTGATTaGCAATCTCTTCTTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PQSGVCDWLTQVLQILEHVLRFD*QSLLLT Trigger: AGTCAAAAGAAGAGATTGCAAATCAAACCGGAGCAC...ATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCAGCCCCAGCTTAATAAGGGAGAAGGTTCTTTAACAGCATTGTCTTGTAACAGTGCATTTTCTTaGAATCCTTTTCCACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLQPQLNKGEGSLTALSCNSAFS*NPFPRP Trigger: AGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGTT...ACAAGACAATGCTGTTAAAGAACCTTCTCCCTTATTAAGCTGGGGCTGAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTAACAGCTTATTAATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAACAGTGCATTTTCTTaGAATCCTTTTCCACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSLLMASGNCSGLYLYNSAFS*NPFPRP Trigger: AGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGTT...GTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATTAATAAGCTGTTAGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGCATCATGTAGGATTTTGTAACTTCATGTACCCACAATCTGGAGTATGTTTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLHHVGFCNFMYPQSGVCLQSLL*TSAALP Trigger: CGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAA...ACATACTCCAGATTGTGGGTACATGAAGTTACAAAATCCTACATGATGCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCAACAGTGCATTTTCTTaGAATCCTTTTCCACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MASGNCSGLYLYNYITLPNSAFS*NPFPRP Trigger: AGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGTT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | CCACAATCTGGAGTATGTGATTGGCTGACCCAGGTTTTGCAAATATTGGAACATACAACAATGCTTCCATaGGCTGAGATCAAAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: PQSGVCDWLTQVLQILEHTTMLP*AEIKEM Trigger: CATTTCTTTGATCTCAGCCAATGGAAGCATTGTTGT...ATGTTCCAATATTTGCAAAACCTGGGTCAGCCAATCACATACTCCAGATTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | AATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCATCCCGTGCTCCGGTTaGATTTGCAATCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NGFWKLLWPLPIQLHNITIPCSG*ICNLFF Trigger: AAAGAAGAGATTGCAAATCAAACCGGAGCACGGGAT...GGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCCAGACCTTTTCCTGTTaGCTGTTCATTAAGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLQTFSC*LFIKES Trigger: GGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTG...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATACAGACCTTTTCCTGTTaGCTGTTCATTAAGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGNCSGLYLYNYITLPIQTFSC*LFIKES Trigger: GGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTG...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAAACAGTGCATTTTCTTaGAATCCTTTTCCACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASGNCSGLYLYNYITLPINSAFS*NPFPRP Trigger: AGGCCGTGGAAAAGGATTCAAAGAAAATGCACTGTT...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCACAACAATGCTTCCATaGGCTGAGATCAAAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: MASGNCSGLYLYNYITLPTTMLP*AEIKEM Trigger: CATTTCTTTGATCTCAGCCAATGGAAGCATTGTTGT...GGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGTAAATTAACCCTTCCAAAAAGTAGGCTACTGTCTAGAAACTGCCTCACAACAATGCTTCCATaGGCTGAGATCAAAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: IRSKLTLPKSRLLSRNCLTTMLP*AEIKEM Trigger: CATTTCTTTGATCTCAGCCAATGGAAGCATTGTTGT...GAGGCAGTTTCTAGACAGTAGCCTACTTTTTGGAAGGGTTAATTTACTCCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGAAACTGCTCTGGCCTTTACCTATACAATTACATAACATTACCCATAACAACAATGCTTCCATaGGCTGAGATCAAAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: ASGNCSGLYLYNYITLPITTMLP*AEIKEM Trigger: CATTTCTTTGATCTCAGCCAATGGAAGCATTGTTGT...TATGGGTAATGTTATGTAATTGTATAGGTAAAGGCCAGAGCAGTTTCCAGAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS TCA 72 bp | CGTAGGCGGCGACAGTCTGGGATCCGAAGGCGAAGATaGGGCTCCAGAGACCCCAGCCTGGGTTGCGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRRRQSGIRRRR*GSRDPSLGCAV Trigger: GACAGCGCAACCCAGGCTGGGGTCTCTGGAGCCTCATCTTCGCCTTCGGATCCCAGACTGTCGCCGCCTACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS TCA 72 bp | AGAAGTTTGCGAGGGGCTGCCACAGGTTTCTGGAGATaGTGCGTAGGCGGCGACAGTCTGGGATCCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLRGAATGFWR*CVGGDSLGSEG Trigger: GCCTTCGGATCCCAGACTGTCGCCGCCTACGCATCATCTCCAGAAACCTGTGGCAGCCCCTCGCAAACTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS GCA 72 bp | GAGCAAGCACGCCTCTGGGCTCTCTTCCTGGAGCGCTaGGCTGATTTTCCTTCCCGTGGCTTTGCTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: EQARLWALFLER*ADFPSRGFADG Trigger: TCCATCAGCAAAGCCACGGGAAGGAAAATCAGCGCAGCGCTCCAGGAAGAGAGCCCAGAGGCGTGCTTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS CCA 72 bp | ACCCAGAACTGCAGAACCAGCGAGCAAGCACGCCTCTaGGCTCTCTTCCTGGAGCGCTGCGCTGATTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TQNCRTSEQARL*ALFLERCADFP Trigger: AGGAAAATCAGCGCAGCGCTCCAGGAAGAGAGCCCAGAGGCGTGCTTGCTCGCTGGTTCTGCAGTTCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105437.8 |
||
| CDS GCA 72 bp | TGCAAGCTGGCTGGGCCACCAGCCGGCAGCACACGTTaGCATACAAGGGAAGCCAAAAGGAACACTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CKLAGPPAGSTR*HTREAKRNTPH Trigger: ATGAGGAGTGTTCCTTTTGGCTTCCCTTGTATGGCAACGTGTGCTGCCGGCTGGTGGCCCAGCCAGCTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS GCA 72 bp | ACTGTTCTTCCTGGCAGGGAGAAGTTTGCGAGGGGCTaGCACAGGTTTCTGGAGATGATGCGTAGGCGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TVLPGREKFARG*HRFLEMMRRRR Trigger: TCGCCGCCTACGCATCATCTCCAGAAACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCAGGAAGAACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS CCA 72 bp | AAGGAATCCTGCAAATGCATCTGCAGCCATGCAAGCTaGCTGGGCCACCAGCCGGCAGCACACGTTGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: KESCKCICSHAS*LGHQPAAHVAI Trigger: TATGGCAACGTGTGCTGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGATTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
||
| CDS CCA 72 bp | TGTCCGTGTGCCCAATGTCCGCTGAACTGTTCTTCCTaGCAGGGAGAAGTTTGCGAGGGGCTGCCACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: CPCAQCPLNCSS*QGEVCEGLPQV Trigger: AACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCACACGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | CAAGGTCAGGGTGGTATGAGCCAGCAAATGGTACTTTaGACCTGCCACAGAACCAGCGAGCAAGCACGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QGQGGMSQQMVL*TCHRTSEQARL Trigger: GAGGCGTGCTTGCTCGCTGGTTCTGTGGCAGGTGCAAAGTACCATTTGCTGGCTCATACCACCCTGACCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068994.14 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | TGTCCGCTGAACTGTTCTTCCTGGCAGGGAGAAGTTTaGGAGGGGCTGCCACAGGTTTCTGGAGATGATGCG | + |
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Preference number: 6 (lower is better) Translates to: CPLNCSSWQGEV*EGLPQVSGDDA Trigger: CGCATCATCTCCAGAAACCTGTGGCAGCCCCTCGCAAACTTCTCCCTGCCAGGAAGAACAGTTCAGCGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 72 bp | AGGCTCCAGAGACCCCAGCCTGGGTTGCGCTGTCCTTaGACTGATTCGCTCTACCCTGGGTTTTTATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RLQRPQPGLRCP*TDSLYPGFLCR Trigger: TCTGCATAAAAACCCAGGGTAGAGCGAATCAGTCCAAGGACAGCGCAACCCAGGCTGGGGTCTCTGGAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | ACTGGCTTCGCATCAAGGCTGGTTTTAGTGTCCGTGTaGCCAATGTCCGCTGAACTGTTCTTCCTGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TGFASRLVLVSV*PMSAELFFLAG Trigger: CCCTGCCAGGAAGAACAGTTCAGCGGACATTGGGCACACGGACACTAAAACCAGCCTTGATGCGAAGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | CAAGGTCAGGGTGGTATGAGCCAGCAAATGGTACTTTaGACCCAGAACTGCAGAACCAGCGAGCAAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: QGQGGMSQQMVL*TQNCRTSEQAR Trigger: GCGTGCTTGCTCGCTGGTTCTGCAGTTCTGGGTGCAAAGTACCATTTGCTGGCTCATACCACCCTGACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105437.8 |
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| CDS TCA 72 bp | GTGCTTGGAGCCAAGATCGTGGGTCCAGAATGTCTCTaGTGGATTTCTGCCTTGGAACTGGCACTGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: VLGAKIVGPECL*WISALELALAS Trigger: CGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGACATTCTGGACCCACGATCTTGGCTCCAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | TGTTTGCTGTTCATTAAGGAATCCTGCAAATGCATCTaGAGCCATGCAAGCTGGCTGGGCCACCAGCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: CLLFIKESCKCI*SHASWLGHQPA Trigger: TGCCGGCTGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAACAGCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 90 bp | CAGAACTCGAATCCCGTGCTCCGGTTTGATTTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCGTGTACGCCTGGATCCGAGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: QNSNPVLRFDLQSLL*TSAALPCTPGSEHC Trigger: GCAGTGCTCGGATCCAGGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAAATCAAACCGGAGCACGGGATTCGAGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000147556.8 |
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| CDS TCA 72 bp | CAAAGATGTGACTCACCGCCCGCCCAGCGGCTGTGCTaGGGACAGAGAAACAGTGCATTTTCTTTGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: QRCDSPPAQRLC*GQRNSAFSLNP Trigger: AGGATTCAAAGAAAATGCACTGTTTCTCTGTCCTCAGCACAGCCGCTGGGCGGGCGGTGAGTCACATCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 90 bp | AATCCAGCACTAACCGTGCTCCGGTTTGATTTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCGTGTACGCCTGGATCCGAGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: NPALTVLRFDLQSLL*TSAALPCTPGSEHC Trigger: GCAGTGCTCGGATCCAGGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAAATCAAACCGGAGCACGGTTAGTGCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000118160.8 |
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| CDS TCA 72 bp | CCGGTTCGCCTATTGGGGACAACACTTTCTTCTCTATaGCCATTTCGTGATTGCCATCAAAGACAGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PVRLLGTTLSSL*PFRDCHQRQRP Trigger: GGGCCGCTGTCTTTGATGGCAATCACGAAATGGTCATAGAGAAGAAAGTGTTGTCCCCAATAGGCGAACCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 72 bp | TCTTCTTTTGACTTCTGCAGCTCTGCCGTGTACGCCTaGATCCGAGCACTGCACACCATGAGGTTCTTAACT | + |
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Preference number: 6 (lower is better) Translates to: SSFDFCSSAVYA*IRALHTMRFLT Trigger: AGTTAAGAACCTCATGGTGTGCAGTGCTCGGATCCAGGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 72 bp | TCGTGGGTCCAGAATGTCTCTGATGGATTTCTGCCTTaGAACTGGCACTGGCTTCGCATCAAGGCTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SWVQNVSDGFLP*NWHWLRIKAGF Trigger: AAAACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGACATTCTGGACCCACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | CTAACCGTGCTCCGGTTTGATTTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCGTGTACGCCTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: LTVLRFDLQSLL*TSAALPCTPGS Trigger: GGATCCAGGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAAATCAAACCGGAGCACGGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000118160.8 |
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| CDS CAA 72 bp | AATCCCGTGCTCCGGTTTGATTTGCAATCTCTTCTTTaGACTTCTGCAGCTCTGCCGTGTACGCCTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: NPVLRFDLQSLL*TSAALPCTPGS Trigger: GGATCCAGGCGTACACGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAAATCAAACCGGAGCACGGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000147556.8 |
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| CDS TCA 72 bp | TCACCATGTCCGTGTCAAACACCTGAGCTCCCATCCTaGATAAGCAAAAGATGGCGAAGCGCTGTGTGCATT | + |
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Preference number: 6 (lower is better) Translates to: SPCPCQTPELPS*ISKRWRSAVCI Trigger: AATGCACACAGCGCTTCGCCATCTTTTGCTTATTCAGGATGGGAGCTCAGGTGTTTGACACGGACATGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | TTTTCCTGTTTGCTGTTCATTAAGGAATCCTGCAAATaGATCTGCAGCCATGCAAGCTGGCTGGGCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: FSCLLFIKESCK*ICSHASWLGHQ Trigger: CTGGTGGCCCAGCCAGCTTGCATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAACAGCAAACAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CCA 72 bp | GTCCAGAATGTCTCTGATGGATTTCTGCCTTGGAACTaGCACTGGCTTCGCATCAAGGCTGGTTTTAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VQNVSDGFLPWN*HWLRIKAGFSV Trigger: GACACTAAAACCAGCCTTGATGCGAAGCCAGTGCCAGTTCCAAGGCAGAAATCCATCAGAGACATTCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | ACAACAATGCTTCCATTGGCTGAGATCAAAGAAATGTaGCCGGAAGGCGCCCATCCACTCCTGAAAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TTMLPLAEIKEM*PEGAHPLLKVC Trigger: GCAGACTTTCAGGAGTGGATGGGCGCCTTCCGGCAACATTTCTTTGATCTCAGCCAATGGAAGCATTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 90 bp | CAGAGCACAGTACAGCCTTCTCCAGCCAACCAGACCTTTTCCTGTTaGCTGTTCATTAAGGAATCCTGCAAATGCATCTGCAGCCATGCA | + |
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Preference number: 6 (lower is better) Translates to: QSTVQPSPANQTFSC*LFIKESCKCICSHA Trigger: TGCATGGCTGCAGATGCATTTGCAGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTGGTTGGCTGGAGAAGGCTGTACTGTGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | TACTCAGCGAGAGCAGCTTCCATATTCCTTCTCGCATaGGGATCTCTAAGTCTATTTTCTCTCGGATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: YSARAASIFLLA*GSLSLFSLGCC Trigger: GCAGCATCCGAGAGAAAATAGACTTAGAGATCCGCATGCGAGAAGGAATATGGAAGCTGCTCTCGCTGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | AACTCGAATCCAGCACTAACCGTGCTCCGGTTTGATTaGCAATCTCTTCTTTTGACTTCTGCAGCTCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: NSNPALTVLRFD*QSLLLTSAALP Trigger: CGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAAATCAAACCGGAGCACGGTTAGTGCTGGATTCGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068994.14 ENSMUST00000118160.8 |
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| CDS TCA 72 bp | TACAAGGGAAGCCAAAAGGAACACTCCTCATCTCCGTaGACAGACAGGTTATGGGTCTTAAAGCAGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: YKGSQKEHSSSP*TDRLWVLKQSP Trigger: TGGAGACTGCTTTAAGACCCATAACCTGTCTGTTCACGGAGATGAGGAGTGTTCCTTTTGGCTTCCCTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | GTACAGCCTTCTCCAGCCAACCAGACCTTTTCCTGTTaGCTGTTCATTAAGGAATCCTGCAAATGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: VQPSPANQTFSC*LFIKESCKCIC Trigger: GCAGATGCATTTGCAGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTGGTTGGCTGGAGAAGGCTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | TACAGCCTTCTCCAGCCAACCAGACCTTTTCCTGTTTaGTGTTCATTAAGGAATCCTGCAAATGCATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: YSLLQPTRPFPV*CSLRNPANASA Trigger: TGCAGATGCATTTGCAGGATTCCTTAATGAACAGCAAACAGGAAAAGGTCTGGTTGGCTGGAGAAGGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | GCGGATTGGTCATCCCGACCAATGAGGAACTGTCGGTaGGTCTCTCCGATTTTCTTTTGTATTATGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ADWSSRPMRNCR*VSPIFFCIMSV Trigger: AACAGACATAATACAAAAGAAAATCGGAGAGACCAACCGACAGTTCCTCATTGGTCGGGATGACCAATCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | TATTTTCAGAACTCGAATCCCGTGCTCCGGTTTGATTaGCAATCTCTTCTTTTGACTTCTGCAGCTCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: YFQNSNPVLRFD*QSLLLTSAALP Trigger: CGGCAGAGCTGCAGAAGTCAAAAGAAGAGATTGCAAATCAAACCGGAGCACGGGATTCGAGTTCTGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | TGTCTGTTACACTTTCCAGTTTCACGGGTGAATCGATaGTCATATCATAATACACTGAGGTCGCCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: CLLHFPVSRVNR*SYHNTLRSPPL Trigger: CAAAGGAGGCGACCTCAGTGTATTATGATATGAGCATCGATTCACCCGTGAAACTGGAAAGTGTAACAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | GCTGTAGACTTCTATCTTTATCTGGAAGTCCGGTCCTaGCTCGTTGAAGATGGTGACATTTTCGAAACATAT | + |
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Preference number: 6 (lower is better) Translates to: AVDFYLYLEVRS*LVEDGDIFETY Trigger: ATATGTTTCGAAAATGTCACCATCTTCAACGAGGCAGGACCGGACTTCCAGATAAAGATAGAAGTCTACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS TCA 72 bp | ATGGCGAAGCGCTGTGTGCATTCTTTATTACTGAAGTaGTCGGAGTCTTTCCACATTAATGGTATTCGGATA | + |
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Preference number: 6 (lower is better) Translates to: MAKRCVHSLLLK*SESFHINGIRI Trigger: TATCCGAATACCATTAATGTGGAAAGACTCCGATCACTTCAGTAATAAAGAATGCACACAGCGCTTCGCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS GCA 72 bp | ATGGTATTCGGATATCTGACAGGGCGATCTTTCCTCTaGAGGATTCTCCTTCTTTATTTTCAGAACTCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: MVFGYLTGRSFL*RILLLYFQNSN Trigger: ATTCGAGTTCTGAAAATAAAGAAGGAGAATCCTGCAGAGGAAAGATCGCCCTGTCAGATATCCGAATACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | ACTTCTATCTTTATCTGGAAGTCCGGTCCTGCCTCGTaGAAGATGGTGACATTTTCGAAACATATATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TSIFIWKSGPAS*KMVTFSKHISV Trigger: CACAGATATATGTTTCGAAAATGTCACCATCTTCAACGAGGCAGGACCGGACTTCCAGATAAAGATAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS CAA 72 bp | AATGAGGAACTGTCGGTTGGTCTCTCCGATTTTCTTTaGTATTATGTCTGTTACACTTTCCAGTTTCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: NEELSVGLSDFL*YYVCYTFQFHG Trigger: CCCGTGAAACTGGAAAGTGTAACAGACATAATACAAAAGAAAATCGGAGAGACCAACCGACAGTTCCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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| CDS TCA 72 bp | AAAAGATGGCGAAGCGCTGTGTGCATTCTTTATTACTaGAGTGATCGGAGTCTTTCCACATTAATGGTATTC | + |
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Preference number: 6 (lower is better) Translates to: KRWRSAVCILYY*SDRSLSTLMVF Trigger: GAATACCATTAATGTGGAAAGACTCCGATCACTTCAGTAATAAAGAATGCACACAGCGCTTCGCCATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068994.14 ENSMUST00000105437.8 ENSMUST00000117086.2 ENSMUST00000118160.8 ENSMUST00000147556.8 |
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