Pregenerated sensors for RTKN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034930Ensembl transcript IDs: ENSMUST00000065512.11, ENSMUST00000087938.11, ENSMUST00000121093.8, ENSMUST00000129316.2, ENSMUST00000130622.8, ENSMUST00000135490.8, ENSMUST00000213056.2
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTGCTAGCCAGGGTGGGGATGGCTCCAGCCTTGTGCCCTCCCGCTaGGCCAGGATGTCTGTCACAGCTGCGATGTCGTCTAGCGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: IASQGGDGSSLVPSR*ARMSVTAAMSSSGS Trigger: TGAGCCGCTAGACGACATCGCAGCTGTGACAGACATCCTGGCCCAGCGGGAGGGCACAAGGCTGGAGCCATCCCCACCCTGGCTAGCAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR CCA 90 bp | TCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTCACACTaGGGACTGGAGCCATGGGCCGAGCTGGCTTTTGCTGTAGAAACC | + |
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Preference number: 1 (lower is better) Translates to: SFSFLARSCCWFLSH*GLEPWAELAFAVET Trigger: GGTTTCTACAGCAAAAGCCAGCTCGGCCCATGGCTCCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CCA 90 bp | GCAACCGAGCGAGAAGGCCCAAGGGAGTGGTCTGCAGGGGCAGCATCCAGGGAACTTGTGCCCTCCCGCTaGGCCAGGATGTCTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: ATEREGPREWSAGAASRELVPSR*ARMSVT Trigger: TGTGACAGACATCCTGGCCCAGCGGGAGGGCACAAG...TTCCCTGGATGCTGCCCCTGCAGACCACTCCCTTGGGCCTTCTCGCTCGGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGACTGGAGCCATGGGCCGAGCTGGCTTTTGCTGTAGAAACCTCTGGATTTTGGGACTGGGGCCACTaGGGCAGGCGAGCAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: WGLEPWAELAFAVETSGFWDWGH*GRRAGA Trigger: AGCTCCTGCTCGCCTGCCTCAGTGGCCCCAGTCCCA...AAATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCCCATGGCTCCAGTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCCATGGGCCGAGCTGGCTTTTGCTGTAGAAACCTCTGGATTTGGGGGATCTATGGCTCCAGCCTTGTaGCCTCCCGCTGGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: EPWAELAFAVETSGFGGSMAPAL*PPAGPG Trigger: TCCTGGCCCAGCGGGAGGGCACAAGGCTGGAGCCAT...AGATCCCCCAAATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCCCATGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTCACACTGGGGACTGGAGCCATGGCGGCTCAATGGCTGTaGCAGCAGGGAGGGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: FLGQILLLVPLTLGTGAMAAQWL*QQGGGK Trigger: CTTGCCCCCTCCCTGCTGCCACAGCCATTGAGCCGC...CATGGCTCCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGATCTGGCCAAGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCGGTCATTTTCTTTCTTaGCCAGATCCTGTTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GRGAQAGQLVPHSAGPRAGHFLS*PDPVAG Trigger: ACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACC...GGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGGCAGATAGGGCAGAGTTGTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGTCCGTCCTAGTCCAGTaGAGGAAGAGGAGCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VQADRAELFQFSPRKRLGSVLVQ*RKRSPG Trigger: GCCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGA...CCCTAAGCGCTTCCTGGGAGAAAACTGGAACAACTCTGCCCTATCTGCCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR CAA 90 bp | CAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTaGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QAGQLVPHSAGPRAQ*SLGHFLSWPDPVAG Trigger: ACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATAGGCTGGCCAACTGGTaGCCCACAGTGCTGGACCTA | + |
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Preference number: 2 (lower is better) Translates to: VPVFSQEALRGILASSRNRLANW*PTVLDL Trigger: TAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGGGTCATTTTCTTTCTTaGCCAGATCCTGTTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRGHFLS*PDPVAG Trigger: ACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACC...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTCACACTGGGGACTGGAGCCATGCTAGGCAAGGCAGGCTaGTCTGTAAACATTGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: FLGQILLLVPLTLGTGAMLGKAG*SVNIAS Trigger: GCTAGCAATGTTTACAGACCAGCCTGCCTTGCCTAG...CATGGCTCCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGATCTGGCCAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCATGGGCCGAGCTGGCTTTTGCTGTAGAAACCTCTGGATTTGGGGGATCTGGTCATTTTCTTTCTTaGCCAGATCCTGTTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: EPWAELAFAVETSGFGGSGHFLS*PDPVAG Trigger: ACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACC...AGATCCCCCAAATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCCCATGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGAGCCCAGTTGTCCTTaGGTCATTTTCTTTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VPVFSQEALRGILASSRNEPSCP*VIFFLG Trigger: GCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTC...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTGTTGCTGGTTCCTCTCACACTGGGGACTGGAGCCATGGGCCGAGCTGGCTGGGATGGCTCCAGCCTaGTGCCCTCCCGCTGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SCCWFLSHWGLEPWAELAGMAPA*CPPAGP Trigger: TGGCCCAGCGGGAGGGCACAAGGCTGGAGCCATCCC...AGCCAGCTCGGCCCATGGCTCCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR CCA 72 bp | TGTCTGTCACAGCTGCGATGTCGTCTAGCGGCTCAATaGCTGTGGCAGCAGGGAGGGGGCAAGGGGAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: CLSQLRCRLAAQ*LWQQGGGKGRG Trigger: CCCCCTCCCCTTGCCCCCTCCCTGCTGCCACAGCCATTGAGCCGCTAGACGACATCGCAGCTGTGACAGACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR CCA 72 bp | CAGGGTGGGGATGGCTCCAGCCTTGTGCCCTCCCGCTaGGCCAGGATGTCTGTCACAGCTGCGATGTCGTCT | + |
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Preference number: 3 (lower is better) Translates to: QGGDGSSLVPSR*ARMSVTAAMSS Trigger: AGACGACATCGCAGCTGTGACAGACATCCTGGCCCAGCGGGAGGGCACAAGGCTGGAGCCATCCCCACCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR CCA 72 bp | TCCATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTaGAGGAAGAGGAGCCCAGGCTGGCCAACTGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: SITPPQPSVLVQ*RKRSPGWPTGA Trigger: GGCACCAGTTGGCCAGCCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CAA 90 bp | GCCGAGCTGGCTTTTGCTGTAGAAACCTCTGGATTTGGGGGATCTCTGCGGGGGGGGGTTGCATCCAGGTaGGGACTGGGGCCACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AELAFAVETSGFGGSLRGGVASR*GLGPLR Trigger: CCTCAGTGGCCCCAGTCCCAACCTGGATGCAACCCC...CCCCCGCAGAGATCCCCCAAATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGC 62% GC, longest homopolymer 9 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCGGGTCATTTTCTTTCTaGGCCAGATCCTGTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: EEEPRLANWCPTVLDLEPGSFSF*ARSCCW Trigger: CCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCC...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTCACACTGGGGACTGGAGCCATGTCCCCAGGGCAGGGGTaGCATCCAGGTTGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLGQILLLVPLTLGTGAMSPGQG*HPGWDW Trigger: CCAGTCCCAACCTGGATGCAACCCCTGCCCTGGGGA...CATGGCTCCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGATCTGGCCAAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CAA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGGGGTCATTTTCTTTCTaGGCCAGATCCTGTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRGSFSF*ARSCCW Trigger: CCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCC...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACGGACCTAGAGCCCAGTaGTCCTTGGGTCATTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QEALRGILASSRNGPPLYGPRAQ*SLGHFL Trigger: AAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCC...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR CCA 72 bp | CTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTaGTTCCTCTCACACTGGGGACTGGAGCCATGGGCC | + |
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Preference number: 3 (lower is better) Translates to: LGSFSFLARSCC*FLSHWGLEPWA Trigger: GGCCCATGGCTCCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CAA 90 bp | GGACTGGAGCCATGGGCCGAGCTGGCTTTTGCTGTAGAAACCTCTGGATTTGGGGGGTCATTTTCTTTCTaGGCCAGATCCTGTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GLEPWAELAFAVETSGFGGSFSF*ARSCCW Trigger: CCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCC...CCCAAATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCCCATGGCTCCAGTCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACAGAGCCCAGTTGTCCTaGGGTCATTTTCTTTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: QEALRGILASSRNGPPLYRAQLS*GHFLSW Trigger: CCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCT...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR CCA 72 bp | TGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTaGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: CPTVLDLEPSCP*VIFFLGQILLL Trigger: CAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGGTCATTTTCTTTCTaGGCCAGATCCTGTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VPVFSQEALRGILASSRNGSFSF*ARSCCW Trigger: CCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCC...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCATGGCTCCAGCCTTGTaGCCTCCCGCTGGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: EEEPRLANWCPTVLDLEPMAPAL*PPAGPG Trigger: TCCTGGCCCAGCGGGAGGGCACAAGGCTGGAGCCAT...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTCCCCAGGGCAGGGGTTaGATCCAGGTTGGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSPQGRG*IQVGTG Trigger: CCCAGTCCCAACCTGGATGCAACCCCTGCCCTGGGG...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTGGAAGCGGCCGCGTTTaGACTCCATCTCCAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPGSGRV*TPSPGR Trigger: CCGCCCTGGAGATGGAGTTCAAACGCGGCCGCTTCC...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065512.11 |
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| CDS-3UTR GCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGGTGGCTTCCAGAGCCTaGTCTCGCTGGGAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQVASRA*SRWEQA Trigger: AGCCTGCTCCCAGCGAGAGCAGGCTCTGGAAGCCAC...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCTGCAGCTCCCCGGCTTaGTGCACCCTAAGGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: EEEPRLANWCPTVLDLEPCSSPA*CTLRAP Trigger: TGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCA...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGGGCCACTCTGGGGCCTaGTCCAACTCACCTGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRGHSGA*SNSPAR Trigger: CCGGGCAGGTGAGTTGGAGCAGGCCCCAGAGTGGCC...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTCCCAAGGGAGTGGTCTaGAGGGGCAGCATCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSPKGVV*RGSIQG Trigger: TCCCTGGATGCTGCCCCTGCAGACCACTCCCTTGGG...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCTGGTGGCAAGCCTCTTaGGAGCACCAGCCAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EEEPRLANWCPTVLDLEPWWQAS*EHQPGL Trigger: GAGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCA...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCAGCCCCTGGCCACTGTaGTCCGACTCCGATGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GRGAQAGQLVPHSAGPRASPWPL*SDSDGF Trigger: GAAACCATCGGAGTCGGATCACAGTGGCCAGGGGCT...GGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065512.11 |
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| CDS-3UTR GCA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCGGCGGCAACACACGCTaGCATAAAGGGGTAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EEEPRLANWCPTVLDLEPGGNTR*HKGVAR Trigger: CCTGGCTACCCCTTTATGGCAGCGTGTGTTGCCGCC...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGATGGCTCCAGCCTTGTaGCCTCCCGCTGGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWMAPAL*PPAGPG Trigger: TCCTGGCCCAGCGGGAGGGCACAAGGCTGGAGCCAT...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGCCCCAGGGCAGGGGTTaGATCCAGGTTGGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWPQGRG*IQVGTG Trigger: CCCAGTCCCAACCTGGATGCAACCCCTGCCCTGGGG...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCCAGCAGGCTCTTGGTaGCTTCCAGAGCCTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GRGAQAGQLVPHSAGPRAPAGSW*LPEPAL Trigger: GAGAGCAGGCTCTGGAAGCCACCAAGAGCCTGCTGG...GGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCCTTGTGCCCTCCCGCTaGGCCAGGATGTCTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: EEEPRLANWCPTVLDLEPLVPSR*ARMSVT Trigger: TGTGACAGACATCCTGGCCCAGCGGGAGGGCACAAG...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCTTGTGCCCTCCCGCTaGGCCAGGATGTCTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: GRGAQAGQLVPHSAGPRALVPSR*ARMSVT Trigger: TGTGACAGACATCCTGGCCCAGCGGGAGGGCACAAG...GGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTGGGGACTGGAGCCATaGGCCGAGCTGGCTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQWGLEP*AELAFA Trigger: AGCAAAAGCCAGCTCGGCCCATGGCTCCAGTCCCCA...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTGCAGGGTTCTCCTCATaGCTGGTGAGCGTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSAGFSS*LVSVRS Trigger: TGACCTCACGCTCACCAGTCATGAGGAGAACCCTGC...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACTGGGACTGGGGCCACTaGGGCAGGCGAGCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYWDWGH*GRRAGA Trigger: AGCTCCTGCTCGCCTGCCTCAGTGGCCCCAGTCCCA...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTCGCTGGGAGCAGGCTaGCAGCAGCTTGCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ANWCPTVLDLEPSCPWVISLGAG*QQLAGP Trigger: GGGGCCTGCAAGCTGCTGGCAGCCTGCTCCCAGCGA...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTGGCTTCCAGAGCCTaGTCTCGCTGGGAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWVASRA*SRWEQA Trigger: AGCCTGCTCCCAGCGAGAGCAGGCTCTGGAAGCCAC...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTAGCACTGTCCAGCGATaGCCTGACTCTCTTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSSTVQR*PDSLPR Trigger: TCGGGGAAGAGAGTCAGGGCATCGCTGGACAGTGCT...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCGTCCTCCAGGCTGAGTaGCATCTGCCGGATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEEPRLANWCPTVLDLEPVLQAE*HLPDVE Trigger: CTCTACATCCGGCAGATGGCACTCAGCCTGGAGGAC...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTCCAGCAGGCTCTTGGTaGCTTCCAGAGCCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPPAGSW*LPEPAL Trigger: GAGAGCAGGCTCTGGAAGCCACCAAGAGCCTGCTGG...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGGTGTGGGCCAAGAGGTaGAATCGAGGACCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQVWAKR*NRGPPT Trigger: TGTGGGAGGTCCTCGATTCCACCTCTTGGCCCACAC...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGGGGCACCACTTGCAGTaGGCTGGATCATGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQGHHLQ*AGSCRE Trigger: CTCTCTGCATGATCCAGCCCACTGCAAGTGGTGCCC...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGCTGTATCCTTCCACATaGGTGGGATCCGGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQLYPST*VGSGGQ Trigger: CTGACCTCCGGATCCCACTCATGTGGAAGGATACAG...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGGGCCCAGGGAGCTACTaGGTTTGGTGGCAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRGPGSY*VWWQAS Trigger: AGAGGCTTGCCACCAAACTCAGTAGCTCCCTGGGCC...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTCAGTGGGCTGGATCATaGAGAGAGGCTGAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPQWAGS*REAELP Trigger: TGGCAGCTCAGCCTCTCTGCATGATCCAGCCCACTG...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTGTCCTCCAGGCTGAGTaGCATCTGCCGGATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPVLQAE*HLPDVE Trigger: CTCTACATCCGGCAGATGGCACTCAGCCTGGAGGAC...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACTGCTTGGCCAGGGCTTaGGGTGGTTTCCGGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYCLARA*GGFRGA Trigger: TGCGCCCCGGAAACCACCCCAAGCCCTGGCCAAGCA...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGTGGGGACTGGAGCCATaGGCCGAGCTGGCTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWWGLEP*AELAFA Trigger: AGCAAAAGCCAGCTCGGCCCATGGCTCCAGTCCCCA...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTCTGTATCCTTCCACATaGGTGGGATCCGGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPLYPST*VGSGGQ Trigger: CTGACCTCCGGATCCCACTCATGTGGAAGGATACAG...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGGCAGATAGGGCAGAGTTGTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGTCGCTGGGAGCAGGCTaGCAGCAGCTTGCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQADRAELFQFSPRKRLGSLGAG*QQLAGP Trigger: GGGGCCTGCAAGCTGCTGGCAGCCTGCTCCCAGCGA...CCCTAAGCGCTTCCTGGGAGAAAACTGGAACAACTCTGCCCTATCTGCCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACGCAGAGAGGCTGAGCTaGCAGGCGGCAACACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYAERLS*QAATHA Trigger: AGCGTGTGTTGCCGCCTGGCAGCTCAGCCTCTCTGC...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTGCAGCTCCCCGGCTTaGTGCACCCTAAGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ANWCPTVLDLEPSCPWVICSSPA*CTLRAP Trigger: TGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCA...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACTGGTGGCAAGCCTCTTaGGAGCACCAGCCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYWWQAS*EHQPGL Trigger: GAGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCA...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGGTGTGGGCCAAGAGGTaGAATCGAGGACCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRVWAKR*NRGPPT Trigger: TGTGGGAGGTCCTCGATTCCACCTCTTGGCCCACAC...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTAGGGTAAGAGTGGTGTaGGCCAAGAGGTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSRVRVV*AKRWNR Trigger: TCGATTCCACCTCTTGGCCCACACCACTCTTACCCT...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGCTCATCCGGATCTCATaGTCTAGTTTCCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQLIRIS*SSFLCS Trigger: GCTGCAGAGGAAACTAGATCATGAGATCCGGATGAG...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCACCATCTCTGTGTCCTaGATCTGTTCCCCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGAQAGQLVPHSAGPRATISVS*ICSPIC Trigger: GCAGATTGGGGAACAGATTCAGGACACAGAGATGGT...GGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTGAAAGGAGATGTCTGTaGGGGTCCTGTCTACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPERRCL*GSCLPG Trigger: TCCTGGTAGACAGGACCCTCACAGACATCTCCTTTC...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGCCACTCTGGGGCCTaGTCCAACTCACCTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPVFSQEALRGILASSRNGHSGA*SNSPAR Trigger: CCGGGCAGGTGAGTTGGAGCAGGCCCCAGAGTGGCC...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGGGCCGAGCTGGCTTTTaGTGTAGAAACCTCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQGRAGF*CRNLWI Trigger: AATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCC...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTGGCCGAGCTGGCTTTTaGTGTAGAAACCTCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSGRAGF*CRNLWI Trigger: AATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCC...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGCGATGTCGTCTAGCGGCTCAATGGCTGTGGCAGCAGGGAGGGGGCAAGGAGATGGCATTATTCTaGAGGAGCAGCCCCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QLRCRLAAQWLWQQGGGKEMALF*RSSPSQ Trigger: CTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTC...CTTGCCCCCTCCCTGCTGCCACAGCCATTGAGCCGCTAGACGACATCGCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTATCCTTCCACATGAGTaGGATCCGGAGGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSILPHE*DPEVRD Trigger: ATCTCTGACCTCCGGATCCCACTCATGTGGAAGGAT...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTCAACAGTGCCTCCACTaGCTCATGTCAAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPRLANWCPTVLDLEPSQQCLH*LMSKKS Trigger: GCTCTTCTTTGACATGAGCCAGTGGAGGCACTGTTG...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGCTAGGCAAGGCAGGCTaGTCTGTAAACATTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQLGKAG*SVNIAS Trigger: GCTAGCAATGTTTACAGACCAGCCTGCCTTGCCTAG...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGAAAGGAGATGTCTGTaGGGGTCCTGTCTACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWERRCL*GSCLPG Trigger: TCCTGGTAGACAGGACCCTCACAGACATCTCCTTTC...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTGCAGGGTTCTCCTCATaGCTGGTGAGCGTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ANWCPTVLDLEPSCPWVIAGFSS*LVSVRS Trigger: TGACCTCACGCTCACCAGTCATGAGGAGAACCCTGC...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACGCAGGGTTCTCCTCATaGCTGGTGAGCGTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYAGFSS*LVSVRS Trigger: TGACCTCACGCTCACCAGTCATGAGGAGAACCCTGC...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGGATGTAGAGCATATTaGGGTCCTCCAGGATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWGCRAY*GPPGCA Trigger: TGCGCATCCTGGAGGACCTCAATATGCTCTACATCC...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCAGTGGGCTGGATCATaGAGAGAGGCTGAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYQWAGS*REAELP Trigger: TGGCAGCTCAGCCTCTCTGCATGATCCAGCCCACTG...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATAGAGCCTGCTCTCGCTaGGAGCAGGCTGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVFSQEALRGILASSRNRACSR*EQAASS Trigger: GCTGCTGGCAGCCTGCTCCCAGCGAGAGCAGGCTCT...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGAGGGTAAGAGTGGTGTaGGCCAAGAGGTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWRVRVV*AKRWNR Trigger: TCGATTCCACCTCTTGGCCCACACCACTCTTACCCT...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTGGGCACCACTTGCAGTaGGCTGGATCATGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANWCPTVLDLEPSCPWVIGHHLQ*AGSCRE Trigger: CTCTCTGCATGATCCAGCCCACTGCAAGTGGTGCCC...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTCTAGGCAAGGCAGGCTaGTCTGTAAACATTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPLGKAG*SVNIAS Trigger: GCTAGCAATGTTTACAGACCAGCCTGCCTTGCCTAG...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGCTCATCCGGATCTCATaGTCTAGTTTCCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRLIRIS*SSFLCS Trigger: GCTGCAGAGGAAACTAGATCATGAGATCCGGATGAG...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTCTGTATCCTTCCACATaGGTGGGATCCGGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ANWCPTVLDLEPSCPWVILYPST*VGSGGQ Trigger: CTGACCTCCGGATCCCACTCATGTGGAAGGATACAG...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCGGTCGCCTTTGTTCTTaGAATACTCTGTATCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEEPRLANWCPTVLDLEPGRLCS*NTLYPS Trigger: GGAAGGATACAGAGTATTTCAAGAACAAAGGCGACC...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCGAGTTTCGATCTTCATaGCTTCATCACAACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGAQAGQLVPHSAGPRAEFRSS*LHHNSA Trigger: GGCACTGTTGTGATGAAGTCATGAAGATCGAAACTC...GGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTTGGGACTGGGGCCACTaGGGCAGGCGAGCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCPWVIFFLGQILLLVPWDWGH*GRRAGA Trigger: AGCTCCTGCTCGCCTGCCTCAGTGGCCCCAGTCCCA...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTTGGGACTGGGGCCACTaGGGCAGGCGAGCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRAQLSLGHFLSWPDPVAWDWGH*GRRAGA Trigger: AGCTCCTGCTCGCCTGCCTCAGTGGCCCCAGTCCCA...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGCAGAGAGGCTGAGCTaGCAGGCGGCAACACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPVFSQEALRGILASSRNAERLS*QAATHA Trigger: AGCGTGTGTTGCCGCCTGGCAGCTCAGCCTCTCTGC...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGATGGCTCCAGCCTTGTaGCCTCCCGCTGGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILMAPAL*PPAGPG Trigger: TCCTGGCCCAGCGGGAGGGCACAAGGCTGGAGCCAT...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGCCCCAGGGCAGGGGTTaGATCCAGGTTGGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILPQGRG*IQVGTG Trigger: CCCAGTCCCAACCTGGATGCAACCCCTGCCCTGGGG...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATCCCAAGGGAGTGGTCTaGAGGGGCAGCATCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPVFSQEALRGILASSRNPKGVV*RGSIQG Trigger: TCCCTGGATGCTGCCCCTGCAGACCACTCCCTTGGG...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGGACGATAGTGAACAGTaGTTCTTGCCCAGTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRDDSEQ*FLPSVC Trigger: GCAGACACTGGGCAAGAACCACTGTTCACTATCGTC...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGCAGATAGGGCAGAGTTGTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGGTGAAAGGCCACTCTaGGGCCTGCTCCAACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VQADRAELFQFSPRKRLGGERPL*GLLQLT Trigger: GGTGAGTTGGAGCAGGCCCCAGAGTGGCCTTTCACC...CCCTAAGCGCTTCCTGGGAGAAAACTGGAACAACTCTGCCCTATCTGCCTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGTCAATGGCCATCTCGTaGTATAAGGACCCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLANWCPTVLDLEPSCPWSMAIS*YKDPCL Trigger: CAAGCAGGGGTCCTTATACCACGAGATGGCCATTGA...CCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCTCGCTGGGAGCAGGCTaGCAGCAGCTTGCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITSLGAG*QQLAGP Trigger: GGGGCCTGCAAGCTGCTGGCAGCCTGCTCCCAGCGA...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAGCAGAGAGGCTGAGCTaGCAGGCGGCAACACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILASSRNGPPLYHDSHNLAERLS*QAATHA Trigger: AGCGTGTGTTGCCGCCTGGCAGCTCAGCCTCTCTGC...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGTTCTTGCCCAGTGTCTaGATCCTCAGATCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRFLPSV*ILRSPV Trigger: TACTGGAGATCTGAGGATGCAGACACTGGGCAAGAA...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCGGCCACTCTGGGGCCTaGTCCAACTCACCTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITGHSGA*SNSPAR Trigger: CCGGGCAGGTGAGTTGGAGCAGGCCCCAGAGTGGCC...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGACTTCATCACAACAGTaGCTCCACTGGCTCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRTSSQQ*LHWLMS Trigger: TGACATGAGCCAGTGGAGGCACTGTTGTGATGAAGT...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCACCCAAGGGAGTGGTCTaGAGGGGCAGCATCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPRAQLSLGHFLSWPPKGVV*RGSIQG Trigger: TCCCTGGATGCTGCCCCTGCAGACCACTCCCTTGGG...TGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTAGAGCCTGCTCTCGCTaGGAGCAGGCTGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSCPWVIFFLGQILLLVPRACSR*EQAASS Trigger: GCTGCTGGCAGCCTGCTCCCAGCGAGAGCAGGCTCT...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGCGATGTCGTCTAGCGGCTCAATGGCTGTGGCAGCAGGGAGGGGGCAAGATAAGACCATCTCGTaGTATAAGGACCCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAAMSSSGSMAVAAGRGQDKTIS*YKDPCL Trigger: CAAGCAGGGGTCCTTATACCACGAGATGGTCTTATC...TTGCCCCCTCCCTGCTGCCACAGCCATTGAGCCGCTAGACGACATCGCAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACACCATCTCTGTGTCCTaGATCTGTTCCCCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYTISVS*ICSPIC Trigger: GCAGATTGGGGAACAGATTCAGGACACAGAGATGGT...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGGGCCCAGGGAGCTACTaGGTTTGGTGGCAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILGPGSY*VWWQAS Trigger: AGAGGCTTGCCACCAAACTCAGTAGCTCCCTGGGCC...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAGGCGGCAACACACGCTaGCATAAAGGGGTAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILASSRNGPPLYHDSHNLGGNTR*HKGVAR Trigger: CCTGGCTACCCCTTTATGGCAGCGTGTGTTGCCGCC...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GGAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCAACAAAAGAGGTTTGTaGCTTTCAGGACTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRGAQAGQLVPHSAGPRANKRGL*LSGLHV Trigger: TACATGGAGTCCTGAAAGGCACAAACCTCTTTTGTT...GGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR GCA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTATGTCAAAGAAGAGCTaGCAAAGCGCCTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ANWCPTVLDLEPSCPWVIMSKKS*QSASIQ Trigger: CTGGATGGAGGCGCTTTGGCAGCTCTTCTTTGACAT...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGTGTGGGCCAAGAGGTaGAATCGAGGACCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VPVFSQEALRGILASSRNVWAKR*NRGPPT Trigger: TGTGGGAGGTCCTCGATTCCACCTCTTGGCCCACAC...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS-3UTR CCA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAGGTGAAAGGCCACTCTaGGGCCTGCTCCAACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILASSRNGPPLYHDSHNLGERPL*GLLQLT Trigger: GGTGAGTTGGAGCAGGCCCCAGAGTGGCCTTTCACC...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCAACAGTGCCTCCACTaGCTCATGTCAAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYQQCLH*LMSKKS Trigger: GCTCTTCTTTGACATGAGCCAGTGGAGGCACTGTTG...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCTGCTTGGCCAGGGCTTaGGGTGGTTTCCGGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITCLARA*GGFRGA Trigger: TGCGCCCCGGAAACCACCCCAAGCCCTGGCCAAGCA...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTCTTGTGCCCTCCCGCTaGGCCAGGATGTCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGPRAQLSLGHFLSWPDPLVPSR*ARMSVT Trigger: TGTGACAGACATCCTGGCCCAGCGGGAGGGCACAAG...AGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTATGGGGACTGGAGCCATaGGCCGAGCTGGCTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILASSRNGPPLYHDSHNLWGLEP*AELAFA Trigger: AGCAAAAGCCAGCTCGGCCCATGGCTCCAGTCCCCA...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTGGCCCAGGGAGCTACTaGGTTTGGTGGCAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCPWVIFFLGQILLLVPGPGSY*VWWQAS Trigger: AGAGGCTTGCCACCAAACTCAGTAGCTCCCTGGGCC...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTCTGTGTCCTCCAGGCTaGGTGCCATCTGCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PRAQLSLGHFLSWPDPVALCPPG*VPSAGC Trigger: ACATCCGGCAGATGGCACTCAGCCTGGAGGACACAG...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTGTGTCCTCCAGGCTaGGTGCCATCTGCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSCPWVIFFLGQILLLVPLCPPG*VPSAGC Trigger: ACATCCGGCAGATGGCACTCAGCCTGGAGGACACAG...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGAGCACTGTCCAGCGATaGCCTGACTCTCTTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILSTVQR*PDSLPR Trigger: TCGGGGAAGAGAGTCAGGGCATCGCTGGACAGTGCT...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGCACTGTCCAGCGATaGCCTGACTCTCTTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ILASSRNGPPLYHDSHNLSTVQR*PDSLPR Trigger: TCGGGGAAGAGAGTCAGGGCATCGCTGGACAGTGCT...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCACAGTGGGCTGGATCATaGAGAGAGGCTGAGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPRAQLSLGHFLSWPQWAGS*REAELP Trigger: TGGCAGCTCAGCCTCTCTGCATGATCCAGCCCACTG...TGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCTGCAGCTCCCCGGCTTaGTGCACCCTAAGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITCSSPA*CTLRAP Trigger: TGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCA...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTAACAAAAGAGGTTTGTaGCTTTCAGGACTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRLANWCPTVLDLEPSCPNKRGL*LSGLHV Trigger: TACATGGAGTCCTGAAAGGCACAAACCTCTTTTGTT...AGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACTTCTTGCCCAGTGTCTaGATCCTCAGATCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYFLPSV*ILRSPV Trigger: TACTGGAGATCTGAGGATGCAGACACTGGGCAAGAA...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTCCAGCAGGCTCTTGGTaGCTTCCAGAGCCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRAQLSLGHFLSWPDPVAPAGSW*LPEPAL Trigger: GAGAGCAGGCTCTGGAAGCCACCAAGAGCCTGCTGG...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCTGGTGGCAAGCCTCTTaGGAGCACCAGCCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITWWQAS*EHQPGL Trigger: GAGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCA...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGGGCACCACTTGCAGTaGGCTGGATCATGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRAQLSLGHFLSWPDPGHHLQ*AGSCRE Trigger: CTCTCTGCATGATCCAGCCCACTGCAAGTGGTGCCC...AGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| 3UTR CAA 72 bp | GTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTaGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHSAGPRAQLS*GHFLSWPDPVA Trigger: AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTGGTCGCCTTTGTTCTTaGAATACTCTGTATCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANWCPTVLDLEPSCPWVIGRLCS*NTLYPS Trigger: GGAAGGATACAGAGTATTTCAAGAACAAAGGCGACC...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATATCTGTTCCCCAATCTaGAGCAGCAGGAACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVFSQEALRGILASSRNICSPI*SSRNTA Trigger: GGCTGTGTTCCTGCTGCTGCAGATTGGGGAACAGAT...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCGGCGGCAACACACGCTaGCATAAAGGGGTAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITGGNTR*HKGVAR Trigger: CCTGGCTACCCCTTTATGGCAGCGTGTGTTGCCGCC...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGGCTCACCCATGTAGCTaGGAATACGGCTGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILAHPCS*EYGCCT Trigger: TGTGCAACAGCCGTATTCTCAGCTACATGGGTGAGC...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGATCTGTTCCCCAATCTaGAGCAGCAGGAACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILICSPI*SSRNTA Trigger: GGCTGTGTTCCTGCTGCTGCAGATTGGGGAACAGAT...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACGTACGGAATCCATCTTaGACTTCTTCTAGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYVRNPS*TSSRVR Trigger: TCTTACCCTAGAAGAAGTGCAAGATGGATTCCGTAC...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGAGGGTAAGAGTGGTGTaGGCCAAGAGGTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILRVRVV*AKRWNR Trigger: TCGATTCCACCTCTTGGCCCACACCACTCTTACCCT...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTCTCTGCTCTCCAGCTaGAGGGTGTTTGTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILSLLSS*RVFVTS Trigger: TGAGGTGACAAACACCCTCCAGCTGGAGAGCAGAGA...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATCTAGGCAAGGCAGGCTaGTCTGTAAACATTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVFSQEALRGILASSRNLGKAG*SVNIAS Trigger: GCTAGCAATGTTTACAGACCAGCCTGCCTTGCCTAG...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAACCATCTCTGTGTCCTaGATCTGTTCCCCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPRAQLSLGHFLSWPTISVS*ICSPIC Trigger: GCAGATTGGGGAACAGATTCAGGACACAGAGATGGT...TGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGCAGATAGGGCAGAGTTGTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAGTTTCGATCTTCATaGCTTCATCACAACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQADRAELFQFSPRKRLGEFRSS*LHHNSA Trigger: GGCACTGTTGTGATGAAGTCATGAAGATCGAAACTC...CCCTAAGCGCTTCCTGGGAGAAAACTGGAACAACTCTGCCCTATCTGCCTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTGGATGTAGAGCATATTaGGGTCCTCCAGGATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSCPWVIFFLGQILLLVPGCRAY*GPPGCA Trigger: TGCGCATCCTGGAGGACCTCAATATGCTCTACATCC...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACAACAAAAGAGGTTTGTaGCTTTCAGGACTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QEALRGILASSRNGPPLYNKRGL*LSGLHV Trigger: TACATGGAGTCCTGAAAGGCACAAACCTCTTTTGTT...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGGCCGAGCTGGCTTTTaGTGTAGAAACCTCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: AGPRAQLSLGHFLSWPDPGRAGF*CRNLWI Trigger: AATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCC...AGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAATCCTTCCACATGAGTaGGATCCGGAGGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILASSRNGPPLYHDSHNLILPHE*DPEVRD Trigger: ATCTCTGACCTCCGGATCCCACTCATGTGGAAGGAT...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTTCTCTGCTCTCCAGCTaGAGGGTGTTTGTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRAQLSLGHFLSWPDPVASLLSS*RVFVTS Trigger: TGAGGTGACAAACACCCTCCAGCTGGAGAGCAGAGA...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCATCAATGGCCATCTCGTaGTATAAGGACCCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPRAQLSLGHFLSWPSMAIS*YKDPCL Trigger: CAAGCAGGGGTCCTTATACCACGAGATGGCCATTGA...TGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTCAATGGCCATCTCGTaGTATAAGGACCCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILSMAIS*YKDPCL Trigger: CAAGCAGGGGTCCTTATACCACGAGATGGCCATTGA...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTCTTGCCCAGTGTCTaGATCCTCAGATCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILFLPSV*ILRSPV Trigger: TACTGGAGATCTGAGGATGCAGACACTGGGCAAGAA...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTATGTCAAAGAAGAGCTaGCAAAGCGCCTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRAQLSLGHFLSWPDPVAMSKKS*QSASIQ Trigger: CTGGATGGAGGCGCTTTGGCAGCTCTTCTTTGACAT...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTATCCTTCCACATGAGTaGGATCCGGAGGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRAQLSLGHFLSWPDPVAILPHE*DPEVRD Trigger: ATCTCTGACCTCCGGATCCCACTCATGTGGAAGGAT...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGACGATAGTGAACAGTaGTTCTTGCCCAGTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRAQLSLGHFLSWPDPVADDSEQ*FLPSVC Trigger: GCAGACACTGGGCAAGAACCACTGTTCACTATCGTC...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | CACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGGTCGCCTTTGTTCTTaGAATACTCTGTATCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPRAQLSLGHFLSWPGRLCS*NTLYPS Trigger: GGAAGGATACAGAGTATTTCAAGAACAAAGGCGACC...TGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAGAGTTTCGATCTTCATaGCTTCATCACAACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILASSRNGPPLYHDSHNLEFRSS*LHHNSA Trigger: GGCACTGTTGTGATGAAGTCATGAAGATCGAAACTC...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTACTTCATCACAACAGTaGCTCCACTGGCTCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSCPWVIFFLGQILLLVPTSSQQ*LHWLMS Trigger: TGACATGAGCCAGTGGAGGCACTGTTGTGATGAAGT...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCGACGATAGTGAACAGTaGTTCTTGCCCAGTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITDDSEQ*FLPSVC Trigger: GCAGACACTGGGCAAGAACCACTGTTCACTATCGTC...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CCA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCCAACAGTGCCTCCACTaGCTCATGTCAAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NGPPLYHDSHNLRGVSITQQCLH*LMSKKS Trigger: GCTCTTCTTTGACATGAGCCAGTGGAGGCACTGTTG...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGGTACGGAATCCATCTTaGACTTCTTCTAGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDLEPSCPWVIFFLGQILVRNPS*TSSRVR Trigger: TCTTACCCTAGAAGAAGTGCAAGATGGATTCCGTAC...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTACGGAATCCATCTTaGACTTCTTCTAGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGPRAQLSLGHFLSWPDPVRNPS*TSSRVR Trigger: TCTTACCCTAGAAGAAGTGCAAGATGGATTCCGTAC...AGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGCTGCTTGGCCAGGGCTaGGGGTGGTTTCCGGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQLLGQG*GWFPGR Trigger: GCGCCCCGGAAACCACCCCAAGCCCTGGCCAAGCAG...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCCTGCTTGGCCAGGGCTaGGGGTGGTTTCCGGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EEEPRLANWCPTVLDLEPLLGQG*GWFPGR Trigger: GCGCCCCGGAAACCACCCCAAGCCCTGGCCAAGCAG...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTGGGATGGCTCCAGCCTaGTGCCCTCCCGCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EEPRLANWCPTVLDLEPSGMAPA*CPPAGP Trigger: TGGCCCAGCGGGAGGGCACAAGGCTGGAGCCATCCC...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTCTGCAGCTCCCCGGCTaGCTGCACCCTAAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: EEPRLANWCPTVLDLEPSLQLPG*LHPKGT Trigger: GGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAG...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGCTGCAGCTCCCCGGCTaGCTGCACCCTAAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGAQAGQLVPHSAGPRAQLQLPG*LHPKGT Trigger: GGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAG...CTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTGGGGTTGCATCCAGGTaGGGACTGGGGCCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEPRLANWCPTVLDLEPSGVASR*GLGPLR Trigger: CCTCAGTGGCCCCAGTCCCAACCTGGATGCAACCCC...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GAAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCTCCCCAGGGCAGGGGTaGCATCCAGGTTGGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEEPRLANWCPTVLDLEPSPGQG*HPGWDW Trigger: CCAGTCCCAACCTGGATGCAACCCCTGCCCTGGGGA...GGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS TCA 90 bp | ATCCGGAGGTCAGAGATGCAGACCCGGCCACGGCAAGGGGAGTGCTaGGCAGGCTGCACACTGTCCGAAGGTCGCCTGCCTGTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IRRSEMQTRPRQGEC*AGCTLSEGRLPVFS Trigger: GGAGAAGACAGGCAGGCGACCTTCGGACAGTGTGCAGCCTGCTCAGCACTCCCCTTGCCGTGGCCGGGTCTGCATCTCTGACCTCCGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000129316.2 ENSMUST00000130622.8 ENSMUST00000135490.8 |
||
| CDS-3UTR CAA 90 bp | CATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGTTGGTGGCAAGCCTCTaGGGAGCACCAGCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HYPSPAFRPSPVEEEEPRLVASL*GAPARA Trigger: AGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCAA...CCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTGGGGAGGGGTAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCGGAAGCGGCCGCGTTaGAACTCCATCTCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QEALRGILASSRNGPPLYRKRPR*NSISRA Trigger: CGCCCTGGAGATGGAGTTCAAACGCGGCCGCTTCCG...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065512.11 |
||
| CDS-3UTR CAA 90 bp | GAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTCCAGCTGGAGGGTGTTaGTCACCTCATCATCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EEPRLANWCPTVLDLEPSPAGGC*SPHHPH Trigger: ATGGGGATGATGAGGTGACAAACACCCTCCAGCTGG...ACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGCCAGCCTGGGCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTGGGGTTGCATCCAGGTaGGGACTGGGGCCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ANWCPTVLDLEPSCPWVIGVASR*GLGPLR Trigger: CCTCAGTGGCCCCAGTCCCAACCTGGATGCAACCCC...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTCCCCAGGGCAGGGGTaGCATCCAGGTTGGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANWCPTVLDLEPSCPWVISPGQG*HPGWDW Trigger: CCAGTCCCAACCTGGATGCAACCCCTGCCCTGGGGA...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GCCAACTGGTGCCCCACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTGGTGGCAAGCCTCTaGGGAGCACCAGCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ANWCPTVLDLEPSCPWVILVASL*GAPARA Trigger: AGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCAA...AATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTGGGGCACCAGTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAGGGATGGCTCCAGCCTaGTGCCCTCCCGCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILASSRNGPPLYHDSHNLGMAPA*CPPAGP Trigger: TGGCCCAGCGGGAGGGCACAAGGCTGGAGCCATCCC...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS GCA 90 bp | AGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCCGGCTTGCTaGACCCTAAGGGCACCACTTGCAGTGGGCTGGATCATGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTPCTSVPFCSSPAC*TLRAPLAVGWIMQR Trigger: TCTCTGCATGATCCAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCTGAGAATACGGCTGTaGCACACCAGCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QEALRGILASSRNGPPLYLRIRL*HTSRLL Trigger: CAAGAGCCTGCTGGTGTGCAACAGCCGTATTCTCAG...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACAGGGAGCTACTGAGTTaGGTGGCAAGCCTCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QEALRGILASSRNGPPLYRELLS*VASLLG Trigger: TCCCAAGAGGCTTGCCACCAAACTCAGTAGCTCCCT...GTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTGCAGCTCCCCGGCTaGCTGCACCCTAAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSCPWVIFFLGQILLLVPLQLPG*LHPKGT Trigger: GGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAG...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGGGGGTTGCATCCAGGTaGGGACTGGGGCCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDLEPSCPWVIFFLGQILGVASR*GLGPLR Trigger: CCTCAGTGGCCCCAGTCCCAACCTGGATGCAACCCC...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS TCA 90 bp | GAGATGTCTGTGAGGGTCCTGTCTACCAGGACCATCTCTGTGTCCTaGATCTGTTCCCCAATCTGCAGCAGCAGGAACACAGCCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EMSVRVLSTRTISVS*ICSPICSSRNTAQR Trigger: CCGCTGGGCTGTGTTCCTGCTGCTGCAGATTGGGGAACAGATTCAGGACACAGAGATGGTCCTGGTAGACAGGACCCTCACAGACATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000130622.8 ENSMUST00000135490.8 |
||
| CDS GCA 90 bp | AAGAGGTTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTaGAGCTCCCCGGCTTGCTGCACCCTAAGGGCACCACTTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KRFVPFRTPCTSVPF*SSPACCTLRAPLAV Trigger: CACTGCAAGTGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCACAAACCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS CCA 90 bp | CCATCTTGCACTTCTTCTAGGGTAAGAGTGGTGTGGGCCAAGAGGTaGAATCGAGGACCTCCCACAGCTGGGGTAGGTAACAGGACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSCTSSRVRVVWAKR*NRGPPTAGVGNRTG Trigger: TCCCGTCCTGTTACCTACCCCAGCTGTGGGAGGTCCTCGATTCCACCTCTTGGCCCACACCACTCTTACCCTAGAAGAAGTGCAAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
||
| CDS CCA 90 bp | TCAATGGCCATCTCGTGGTATAAGGACCCCTGCTTGGCCAGGGCTTaGGGTGGTTTCCGGGGCGCAGGAGTTTCGATCTTCATGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SMAISWYKDPCLARA*GGFRGAGVSIFMTS Trigger: TGAAGTCATGAAGATCGAAACTCCTGCGCCCCGGAAACCACCCCAAGCCCTGGCCAAGCAGGGGTCCTTATACCACGAGATGGCCATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTTCCCCAGGGCAGGGGTaGCATCCAGGTTGGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRAQLSLGHFLSWPDPVASPGQG*HPGWDW Trigger: CCAGTCCCAACCTGGATGCAACCCCTGCCCTGGGGA...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS GCA 90 bp | TGGCTCATGTCAAAGAAGAGCTGCCAAAGCGCCTCCATCCAGTTCTaGAGGGCTTCTCTGCTCTCCAGCTGGAGGGTGTTTGTCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLMSKKSCQSASIQF*RASLLSSWRVFVTS Trigger: TGAGGTGACAAACACCCTCCAGCTGGAGAGCAGAGAAGCCCTGCAGAACTGGATGGAGGCGCTTTGGCAGCTCTTCTTTGACATGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTTTGGTGGCAAGCCTCTaGGGAGCACCAGCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSCPWVIFFLGQILLLVPLVASL*GAPARA Trigger: AGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCAA...AGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS CCA 90 bp | TGTGTACGGAATCCATCTTGCACTTCTTCTAGGGTAAGAGTGGTGTaGGCCAAGAGGTGGAATCGAGGACCTCCCACAGCTGGGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CVRNPSCTSSRVRVV*AKRWNRGPPTAGVG Trigger: ACCTACCCCAGCTGTGGGAGGTCCTCGATTCCACCTCTTGGCCCACACCACTCTTACCCTAGAAGAAGTGCAAGATGGATTCCGTACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
||
| CDS CCA 90 bp | TGTCACTGTAATAGGAAGAAAGCAAGGCCCGAATCTCTGCTGAGATaGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHCNRKKARPESLLR*HYSAGAAPHRDLRR Trigger: CCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCAGAGATTCGGGCCTTGCTTTCTTCCTATTACAGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATAGGGAGCTACTGAGTTaGGTGGCAAGCCTCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPVFSQEALRGILASSRNRELLS*VASLLG Trigger: TCCCAAGAGGCTTGCCACCAAACTCAGTAGCTCCCT...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS TCA 90 bp | TCACCTGTCACTGTAATAGGAAGAAAGCAAGGCCCGAATCTCTGCTaGGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPVTVIGRKQGPNLC*DGIILQEQPLTGTS Trigger: GGAGGTCCCTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCAGAGATTCGGGCCTTGCTTTCTTCCTATTACAGTGACAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTACTGAGAATACGGCTGTaGCACACCAGCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILASSRNGPPLYHDSHNLLRIRL*HTSRLL Trigger: CAAGAGCCTGCTGGTGTGCAACAGCCGTATTCTCAG...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGAGGGAGCTACTGAGTTaGGTGGCAAGCCTCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDLEPSCPWVIFFLGQILRELLS*VASLLG Trigger: TCCCAAGAGGCTTGCCACCAAACTCAGTAGCTCCCT...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTCCAGCTGGAGGGTGTTaGTCACCTCATCATCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGPRAQLSLGHFLSWPDPPAGGC*SPHHPH Trigger: ATGGGGATGATGAGGTGACAAACACCCTCCAGCTGG...AGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS GCA 90 bp | GCCCAGTGTCTGCATCCTCAGATCTCCAGTAACAAAAGAGGTTTGTaGCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQCLHPQISSNKRGL*LSGLHVPVSHSAAP Trigger: GGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCACAAACCTCTTTTGTTACTGGAGATCTGAGGATGCAGACACTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGAGTGAACAGTGGTTCTaGCCCAGTGTCTGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LDLEPSCPWVIFFLGQILSEQWF*PSVCIL Trigger: GAGGATGCAGACACTGGGCAAGAACCACTGTTCACT...CAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGTGAACAGTGGTTCTaGCCCAGTGTCTGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILASSRNGPPLYHDSHNLSEQWF*PSVCIL Trigger: GAGGATGCAGACACTGGGCAAGAACCACTGTTCACT...TAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCCTGAGAATACGGCTGTaGCACACCAGCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NGPPLYHDSHNLRGVSITLRIRL*HTSRLL Trigger: CAAGAGCCTGCTGGTGTGCAACAGCCGTATTCTCAG...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGGAATCCTAGCCAGCTCCAGGAATTCATCCCCATACTTGTaGCTGATGCTGAGGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VPVFSQEALRGILASSRNSSPYL*LMLRVK Trigger: TTTCACCCTCAGCATCAGCAACAAGTATGGGGATGA...ATTCCTGGAGCTGGCTAGGATTCCCCTAAGCGCTTCCTGGGAGAAAACTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS CCA 90 bp | ACCTGCCCGGACCCTAGTCTCCTTGTTGATGACGATAGTGAACAGTaGTTCTTGCCCAGTGTCTGCATCCTCAGATCTCCAGTAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCPDPSLLVDDDSEQ*FLPSVCILRSPVTK Trigger: TTTTGTTACTGGAGATCTGAGGATGCAGACACTGGGCAAGAACCACTGTTCACTATCGTCATCAACAAGGAGACTAGGGTCCGGGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | AATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCAGTGAACAGTGGTTCTaGCCCAGTGTCTGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NGPPLYHDSHNLRGVSITSEQWF*PSVCIL Trigger: GAGGATGCAGACACTGGGCAAGAACCACTGTTCACT...GGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTTCATCCCCATACTTGTaGCTGATGCTGAGGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGPRAQLSLGHFLSWPDPSSPYL*LMLRVK Trigger: TTTCACCCTCAGCATCAGCAACAAGTATGGGGATGA...AGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTTCATCCCCATACTTGTaGCTGATGCTGAGGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRAQLSLGHFLSWPDPVASSPYL*LMLRVK Trigger: TTTCACCCTCAGCATCAGCAACAAGTATGGGGATGA...AGCAACAGGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAAGGTCGCCTTTGTTCTaGAAATACTCTGTATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSAGPRAQLSLGHFLSWPRSPLF*KYSVSF Trigger: GAAGGATACAGAGTATTTCAAGAACAAAGGCGACCT...TGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS GCA 90 bp | CTCCTTGTTGATGACGATAGTGAACAGTGGTTCTTGCCCAGTGTCTaGATCCTCAGATCTCCAGTAACAAAAGAGGTTTGTGCCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVDDDSEQWFLPSV*ILRSPVTKEVCAFQ Trigger: CTGAAAGGCACAAACCTCTTTTGTTACTGGAGATCTGAGGATGCAGACACTGGGCAAGAACCACTGTTCACTATCGTCATCAACAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
||
| CDS TCA 72 bp | TGTTCCCGGAGGCCCCAGCACTGTCCAGCGATGCCCTaGCTCTCTTCCCCGAGGAACGGCCCAGGGAGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: CSRRPQHCPAMP*LSSPRNGPGSY Trigger: GTAGCTCCCTGGGCCGTTCCTCGGGGAAGAGAGTCAGGGCATCGCTGGACAGTGCTGGGGCCTCCGGGAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
||
| CDS CAA 90 bp | CCCGAGGAACGGCCCAGGGAGCTACTGAGTTTGGTGGCAAGCCTCTaGGGAGCACCAGCCAGGGCTCCCTCCTCTTCCACACAGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PEERPRELLSLVASL*GAPARAPSSSTQAP Trigger: TGGGGCCTGTGTGGAAGAGGAGGGAGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCAAACTCAGTAGCTCCCTGGGCCGTTCCTCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
||
| CDS TCA 72 bp | TCAGAGATGCAGACCCGGCCACGGCAAGGGGAGTGCTaGGCAGGCTGCACACTGTCCGAAGGTCGCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SEMQTRPRQGEC*AGCTLSEGRLP Trigger: AGGCAGGCGACCTTCGGACAGTGTGCAGCCTGCTCAGCACTCCCCTTGCCGTGGCCGGGTCTGCATCTCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000129316.2 ENSMUST00000130622.8 ENSMUST00000135490.8 |
||
| CDS CAA 90 bp | GCCCTGACTCTCTTCCCCGAGGAACGGCCCAGGGAGCTACTGAGTTaGGTGGCAAGCCTCTTGGGAGCACCAGCCAGGGCTCCCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALTLFPEERPRELLS*VASLLGAPARAPSS Trigger: AGAGGAGGGAGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCAAACTCAGTAGCTCCCTGGGCCGTTCCTCGGGGAAGAGAGTCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
||
| CDS GCA 72 bp | TTGCACACCAGCAGGCTCTTGGTGGCTTCCAGAGCCTaGTCTCGCTGGGAGCAGGCTGCCAGCAGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHTSRLLVASRA*SRWEQAASSLQ Trigger: CTGCAAGCTGCTGGCAGCCTGCTCCCAGCGAGAGCAGGCTCTGGAAGCCACCAAGAGCCTGCTGGTGTGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000129316.2 ENSMUST00000130622.8 ENSMUST00000135490.8 |
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| CDS GCA 72 bp | AGTGCTGAGCAGGCTGCACACTGTCCGAAGGTCGCCTaGCTGTCTTCTCCAGCACCTGGGCCTCCTTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: SAEQAAHCPKVA*LSSPAPGPPFA Trigger: GGCGAAAGGAGGCCCAGGTGCTGGAGAAGACAGGCAGGCGACCTTCGGACAGTGTGCAGCCTGCTCAGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000129316.2 ENSMUST00000130622.8 ENSMUST00000135490.8 |
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| CDS GCA 72 bp | CAGCTCCCCGGCTTGCTGCACCCTAAGGGCACCACTTaGAGTGGGCTGGATCATGCAGAGAGGCTGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QLPGLLHPKGTT*SGLDHAERLSC Trigger: GCAGCTCAGCCTCTCTGCATGATCCAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS CAA 72 bp | CGGCCCAGGGAGCTACTGAGTTTGGTGGCAAGCCTCTaGGGAGCACCAGCCAGGGCTCCCTCCTCTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: RPRELLSLVASL*GAPARAPSSST Trigger: TGTGGAAGAGGAGGGAGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCAAACTCAGTAGCTCCCTGGGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
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| CDS CAA 72 bp | CTCTTCCCCGAGGAACGGCCCAGGGAGCTACTGAGTTaGGTGGCAAGCCTCTTGGGAGCACCAGCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LFPEERPRELLS*VASLLGAPARA Trigger: AGCCCTGGCTGGTGCTCCCAAGAGGCTTGCCACCAAACTCAGTAGCTCCCTGGGCCGTTCCTCGGGGAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
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| CDS CAA 90 bp | TCCTCCGGCGACTCGCTGAAGAAACTAAGTCGGAAGCGGCCGCGTTaGAACTCCATCTCCAGGGCGGAGCCCCTGGCCACTGTGATCCGA | + |
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Preference number: 6 (lower is better) Translates to: SSGDSLKKLSRKRPR*NSISRAEPLATVIR Trigger: TCGGATCACAGTGGCCAGGGGCTCCGCCCTGGAGATGGAGTTCAAACGCGGCCGCTTCCGACTTAGTTTCTTCAGCGAGTCGCCGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065512.11 |
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| CDS GCA 72 bp | CCATGTACCAGTGTCCCATTCTGCAGCTCCCCGGCTTaGTGCACCCTAAGGGCACCACTTGCAGTGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PCTSVPFCSSPA*CTLRAPLAVGW Trigger: CCAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS GCA 72 bp | TGCAGAGAGGCTGAGCTGCCAGGCGGCAACACACGCTaGCATAAAGGGGTAGCCAGGCAGGGTTCTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CREAELPGGNTR*HKGVARQGSPH Trigger: ATGAGGAGAACCCTGCCTGGCTACCCCTTTATGGCAGCGTGTGTTGCCGCCTGGCAGCTCAGCCTCTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS GCA 72 bp | TGTACCAGTGTCCCATTCTGCAGCTCCCCGGCTTGCTaGACCCTAAGGGCACCACTTGCAGTGGGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: CTSVPFCSSPAC*TLRAPLAVGWI Trigger: GATCCAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS GCA 72 bp | AGCAAGGCCCGAATCTCTGCTGAGATGGCATTATTCTaGAGGAGCAGCCCCTCACAGGGACCTCCGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SKARISAEMALF*RSSPSQGPPEA Trigger: GGCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCAGAGATTCGGGCCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| CDS CAA 72 bp | TCCATGTACCAGTGTCCCATTCTGCAGCTCCCCGGCTaGCTGCACCCTAAGGGCACCACTTGCAGTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SMYQCPILQLPG*LHPKGTTCSGL Trigger: CAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS GCA 72 bp | GTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTaGAGCTCCCCGGCTTGCTGCACCCTAAGGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: VPFRTPCTSVPF*SSPACCTLRAP Trigger: TGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS CCA 72 bp | ATCTCGTGGTATAAGGACCCCTGCTTGGCCAGGGCTTaGGGTGGTTTCCGGGGCGCAGGAGTTTCGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: ISWYKDPCLARA*GGFRGAGVSIF Trigger: GAAGATCGAAACTCCTGCGCCCCGGAAACCACCCCAAGCCCTGGCCAAGCAGGGGTCCTTATACCACGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS CAA 90 bp | TTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCCGGCTaGCTGCACCCTAAGGGCACCACTTGCAGTGGGCTGGATCATGCA | + |
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Preference number: 6 (lower is better) Translates to: FQDSMYQCPILQLPG*LHPKGTTCSGLDHA Trigger: TGCATGATCCAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS GCA 72 bp | GGTGAAAGGCCACTCTGGGGCCTGCTCCAACTCACCTaGCCGGACCCTAGTCTCCTTGTTGATGACGATAGT | + |
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Preference number: 6 (lower is better) Translates to: GERPLWGLLQLT*PDPSLLVDDDS Trigger: ACTATCGTCATCAACAAGGAGACTAGGGTCCGGGCAGGTGAGTTGGAGCAGGCCCCAGAGTGGCCTTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS CAA 72 bp | TTCCTCTGCAGCTCTGTGTCCGATCCTTCCCTAGCCTaGTCCATTGCGCCTGCAGTTAGCGAGGGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: FLCSSVSDPSLA*SIAPAVSEGSQ Trigger: CTGTGACCCCTCGCTAACTGCAGGCGCAATGGACAAGGCTAGGGAAGGATCGGACACAGAGCTGCAGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130622.8 |
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| CDS CAA 72 bp | GCCTGCTCCAACTCACCTGCCCGGACCCTAGTCTCCTaGTTGATGACGATAGTGAACAGTGGTTCTTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ACSNSPARTLVS*LMTIVNSGSCP Trigger: TGGGCAAGAACCACTGTTCACTATCGTCATCAACAAGGAGACTAGGGTCCGGGCAGGTGAGTTGGAGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS TCA 72 bp | GTGAGGGTCCTGTCTACCAGGACCATCTCTGTGTCCTaGATCTGTTCCCCAATCTGCAGCAGCAGGAACACA | + |
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Preference number: 6 (lower is better) Translates to: VRVLSTRTISVS*ICSPICSSRNT Trigger: TGTGTTCCTGCTGCTGCAGATTGGGGAACAGATTCAGGACACAGAGATGGTCCTGGTAGACAGGACCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000130622.8 ENSMUST00000135490.8 |
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| CDS CAA 72 bp | TGCTCCAACTCACCTGCCCGGACCCTAGTCTCCTTGTaGATGACGATAGTGAACAGTGGTTCTTGCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: CSNSPARTLVSL*MTIVNSGSCPV Trigger: CACTGGGCAAGAACCACTGTTCACTATCGTCATCAACAAGGAGACTAGGGTCCGGGCAGGTGAGTTGGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS GCA 72 bp | CTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTaGACTTCTTCTAGGGTAAGAGTGGTGTGGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LVSVRSCVRNPS*TSSRVRVVWAK Trigger: CTTGGCCCACACCACTCTTACCCTAGAAGAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
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| CDS CCA 72 bp | AATCCATCTTGCACTTCTTCTAGGGTAAGAGTGGTGTaGGCCAAGAGGTGGAATCGAGGACCTCCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: NPSCTSSRVRVV*AKRWNRGPPTA Trigger: AGCTGTGGGAGGTCCTCGATTCCACCTCTTGGCCCACACCACTCTTACCCTAGAAGAAGTGCAAGATGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000135490.8 |
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| CDS CCA 72 bp | AATAGGAAGAAAGCAAGGCCCGAATCTCTGCTGAGATaGCATTATTCTGCAGGAGCAGCCCCTCACAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: NRKKARPESLLR*HYSAGAAPHRD Trigger: GTCCCTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCAGAGATTCGGGCCTTGCTTTCTTCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| CDS CCA 72 bp | TTTGTTCTTGAAATACTCTGTATCCTTCCACATGAGTaGGATCCGGAGGTCAGAGATGCAGACCCGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: FVLEILCILPHE*DPEVRDADPAT Trigger: CGTGGCCGGGTCTGCATCTCTGACCTCCGGATCCCACTCATGTGGAAGGATACAGAGTATTTCAAGAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 ENSMUST00000130622.8 ENSMUST00000135490.8 |
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| CDS TCA 72 bp | ACTGTAATAGGAAGAAAGCAAGGCCCGAATCTCTGCTaGGATGGCATTATTCTGCAGGAGCAGCCCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: TVIGRKQGPNLC*DGIILQEQPLT Trigger: TGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCAGAGATTCGGGCCTTGCTTTCTTCCTATTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213056.2 |
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| CDS CCA 72 bp | GACCCTAGTCTCCTTGTTGATGACGATAGTGAACAGTaGTTCTTGCCCAGTGTCTGCATCCTCAGATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: DPSLLVDDDSEQ*FLPSVCILRSP Trigger: TGGAGATCTGAGGATGCAGACACTGGGCAAGAACCACTGTTCACTATCGTCATCAACAAGGAGACTAGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS CAA 90 bp | CCGGACCCTAGTCTCCTTGTTGATGACGATAGTGAACAGTGGTTCTaGCCCAGTGTCTGCATCCTCAGATCTCCAGTAACAAAAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: PDPSLLVDDDSEQWF*PSVCILRSPVTKEV Trigger: AACCTCTTTTGTTACTGGAGATCTGAGGATGCAGACACTGGGCAAGAACCACTGTTCACTATCGTCATCAACAAGGAGACTAGGGTCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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| CDS CAA 72 bp | AGTCTCCTTGTTGATGACGATAGTGAACAGTGGTTCTaGCCCAGTGTCTGCATCCTCAGATCTCCAGTAACA | + |
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Preference number: 6 (lower is better) Translates to: SLLVDDDSEQWF*PSVCILRSPVT Trigger: TGTTACTGGAGATCTGAGGATGCAGACACTGGGCAAGAACCACTGTTCACTATCGTCATCAACAAGGAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065512.11 ENSMUST00000087938.11 ENSMUST00000121093.8 |
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