Pregenerated sensors for RTF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027304Ensembl transcript IDs: ENSMUST00000028767.9
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGGGGACGAGATGTGCTACGTTCAGTCAAGAAGCTGTGCCTGTaGAATGAGCGAGACTCTCTGGCTGCCCTCCCTAGGACCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: GWGRDVLRSVKKLCL*NERDSLAALPRTCH Trigger: ATGGCAGGTCCTAGGGAGGGCAGCCAGAGAGTCTCGCTCATTCCACAGGCACAGCTTCTTGACTGAACGTAGCACATCTCGTCCCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 90 bp | AACAGTGGGTGGGGACGAGATGTGCTACGTTCAGTCAAGAAGCTGTaGCTGTGGAATGAGCGAGACTCTCTGGCTGCCCTCCCTAGGACC | + |
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Preference number: 1 (lower is better) Translates to: NSGWGRDVLRSVKKL*LWNERDSLAALPRT Trigger: GGTCCTAGGGAGGGCAGCCAGAGAGTCTCGCTCATTCCACAGGCACAGCTTCTTGACTGAACGTAGCACATCTCGTCCCCACCCACTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | TACGTTCAGTCAAGAAGCTGTGCCTGTGGAATGAGCGAGACTCTCTaGCTGCCCTCCCTAGGACCTGCCATGAGCTTCCTGCTCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: YVQSRSCACGMSETL*LPSLGPAMSFLLTC Trigger: GCAGGTGAGCAGGAAGCTCATGGCAGGTCCTAGGGAGGGCAGCCAGAGAGTCTCGCTCATTCCACAGGCACAGCTTCTTGACTGAACGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 90 bp | GATCTTGGCTCAGGCCCCACCTCAGCTGAGACTGCAGGTAGGTGCTaGATGTTGACTGGAATCAGCAGACAGGCAGGTCAGTTGCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: DLGSGPTSAETAGRC*MLTGISRQAGQLLG Trigger: ACCCAGCAACTGACCTGCCTGTCTGCTGATTCCAGTCAACATTCAGCACCTACCTGCAGTCTCAGCTGAGGTGGGGCCTGAGCCAAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 90 bp | CAGGAAGCCAGTTGGTGGGACAAAGCTAAGGTTCCATTGACTGGCTaGGATCTTGGCTCAGGCCCCACCTCAGCTGAGACTGCAGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: QEASWWDKAKVPLTG*DLGSGPTSAETAGR Trigger: CCTACCTGCAGTCTCAGCTGAGGTGGGGCCTGAGCCAAGATCTCAGCCAGTCAATGGAACCTTAGCTTTGTCCCACCAACTGGCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | AAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTGGGGCCTaGGGTTGCTGGGAGATGGGACAGACAAGGAAGGTCTATACAGTA | + |
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Preference number: 1 (lower is better) Translates to: KRRSPIQPRSTVGGA*GCWEMGQTRKVYTV Trigger: TACTGTATAGACCTTCCTTGTCTGTCCCATCTCCCAGCAACCCCAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | AAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTaGGGCCTGGGGTTGCTGGGAGATGGGACAGACAAGGAAGGTCTA | + |
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Preference number: 1 (lower is better) Translates to: KPKEKKPHPTQIHRG*GLGLLGDGTDKEGL Trigger: TAGACCTTCCTTGTCTGTCCCATCTCCCAGCAACCCCAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | CTAGCAAGAACCCCACAGCTCCACGGTAATACTGAGTGTGCTGAGTaGCGGGACTGTGCTAGTTACAAACCAGAAGCAGGCGGGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LARTPQLHGNTECAE*RDCASYKPEAGGRA Trigger: TGCCCTCCCGCCTGCTTCTGGTTTGTAACTAGCACAGTCCCGCCACTCAGCACACTCAGTATTACCGTGGAGCTGTGGGGTTCTTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 90 bp | GCTCAGGCCCCACCTCAGCTGAGACTGCAGGTAGGTGCTGAATGTTaGCTGGAATCAGCAGACAGGCAGGTCAGTTGCTGGGTTAACTCT | + |
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Preference number: 1 (lower is better) Translates to: AQAPPQLRLQVGAEC*LESADRQVSCWVNS Trigger: AGAGTTAACCCAGCAACTGACCTGCCTGTCTGCTGATTCCAGTCAACATTCAGCACCTACCTGCAGTCTCAGCTGAGGTGGGGCCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 90 bp | TGTATGGTTGCAATGAGTCCATCACCGCTCTTTTGCCCAACTCTATaGCACAGCTACAACAAGCTGGGGCACGGGCCACATTTCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: CMVAMSPSPLFCPTL*HSYNKLGHGPHFPV Trigger: CACTGGGAAATGTGGCCCGTGCCCCAGCTTGTTGTAGCTGTGGCATAGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGCAACCATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | TCTTGCCAAACATCAGAGTCACTAGGAAGAGACAGGAACAGTGGGTaGGGACGAGATGTGCTACGTTCAGTCAAGAAGCTGTGCCTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: SCQTSESLGRDRNSG*GRDVLRSVKKLCLW Trigger: CCACAGGCACAGCTTCTTGACTGAACGTAGCACATCTCGTCCCCACCCACTGTTCCTGTCTCTTCCTAGTGACTCTGATGTTTGGCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 90 bp | ACTCTTCAAGTATGTATGGTTGCAATGAGTCCATCACCGCTCTTTTaGCCAACTCTATGCCACAGCTACAACAAGCTGGGGCACGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: TLQVCMVAMSPSPLF*PTLCHSYNKLGHGP Trigger: TGGCCCGTGCCCCAGCTTGTTGTAGCTGTGGCATAGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGCAACCATACATACTTGAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 90 bp | TCTGACATGATAGGAGAGGTCCCAGCAGCTCTAGGACCGTTAGAGTaGAGGCGGCGTTCAACAGTCTGTGATTTCCCCATTTACAAAACA | + |
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Preference number: 1 (lower is better) Translates to: SDMIGEVPAALGPLE*RRRSTVCDFPIYKT Trigger: TGTTTTGTAAATGGGGAAATCACAGACTGTTGAACGCCGCCTGCACTCTAACGGTCCTAGAGCTGCTGGGACCTCTCCTATCATGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | TTATTCTTGCCAAACATCAGAGTCACTAGGAAGAGACAGGAACAGTaGGTGGGGACGAGATGTGCTACGTTCAGTCAAGAAGCTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LFLPNIRVTRKRQEQ*VGTRCATFSQEAVP Trigger: AGGCACAGCTTCTTGACTGAACGTAGCACATCTCGTCCCCACCCACTGTTCCTGTCTCTTCCTAGTGACTCTGATGTTTGGCAAGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 90 bp | GTCTATAAAGAGCTTCGGTCAATGGACTCTTCAAGTATGTATGGTTaGAATGAGTCCATCACCGCTCTTTTGCCCAACTCTATGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: VYKELRSMDSSSMYG*NESITALLPNSMPQ Trigger: CTGTGGCATAGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | GTGATTTCCCCATTTACAAAACAGTCTATAAAGAGCTTCGGTCAATaGACTCTTCAAGTATGTATGGTTGCAATGAGTCCATCACCGCTC | + |
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Preference number: 1 (lower is better) Translates to: VISPFTKQSIKSFGQ*TLQVCMVAMSPSPL Trigger: GAGCGGTGATGGACTCATTGCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGACTGTTTTGTAAATGGGGAAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 90 bp | AGTCAGCTTCTTTTCAAACGTCTCATAACAACATACACACCTCTTTaGTGGCTTCACCCTAGCTGCACAATATATATATATGCTCACCAC | + |
|
Preference number: 1 (lower is better) Translates to: SQLLFKRLITTYTPL*WLHPSCTIYIYAHH Trigger: GTGGTGAGCATATATATATATTGTGCAGCTAGGGTGAAGCCAGCAAAGAGGTGTGTATGTTGTTATGAGACGTTTGAAAAGAAGCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 90 bp | CAGCTTCTTTTCAAACGTCTCATAACAACATACACACCTCTTTGCTaGCTTCACCCTAGCTGCACAATATATATATATGCTCACCACATA | + |
|
Preference number: 1 (lower is better) Translates to: QLLFKRLITTYTPLC*LHPSCTIYIYAHHI Trigger: TATGTGGTGAGCATATATATATATTGTGCAGCTAGGGTGAAGCCAGCAAAGAGGTGTGTATGTTGTTATGAGACGTTTGAAAAGAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGTCTCTTCCCAGTTCCACTGCTGCTCCAGCCCAAAGAGGGCGAATCAGAGACGATGGCGGGGCATaGAGGGTTGGAAGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LESLPSSTAAPAQRGRIRDDGGA*RVGSSR Trigger: CCTGCTGCTTCCAACCCTGCATGCCCCGCCATCGTC...TCTGATTCGCCCTCTTTGGGCTGGAGCAGCAGTGGAACTGGGAAGAGACTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGCGGGGCATGCAGGGTTaGAAGCAGCAGGCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: RANTNLKRRSPIQPRSTVRGMQG*KQQAGS Trigger: ACTTCCAGCCTGCTGCTTCCAACCCTGCATGCCCCG...CACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGATGGAGAGGCCACTGAGGGCATTCACCAGCAGGAGAAAAACTGTGACCCAGGAAGCCAGTTGGTaGGACAAAGCTAAGGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GVMERPLRAFTSRRKTVTQEASW*DKAKVP Trigger: TGGAACCTTAGCTTTGTCCCACCAACTGGCTTCCTG...GGTCACAGTTTTTCTCCTGCTGGTGAATGCCCTCAGTGGCCTCTCCATCACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CAA 90 bp | GACTCTTCAAGTATGTATGGTTGCAATGAGTCCATCACCGCTCTTTaGCCCAACTCTATGCCACAGCTACAACAAGCTGGGGCACGGGCC | + |
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Preference number: 2 (lower is better) Translates to: DSSSMYGCNESITAL*PNSMPQLQQAGARA Trigger: GGCCCGTGCCCCAGCTTGTTGTAGCTGTGGCATAGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGCAACCATACATACTTGAAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCCAGATCCACCGTGGGTaGGGCCTGGGGTTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YGLSYFPELKKSRKQLWVQIHRG*GLGLLG Trigger: TCCCAGCAACCCCAGGCCCCACCCACGGTGGATCTG...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATACCGTGGGTGGGGCCTaGGGTTGCTGGGAGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: NTKALLKQKSYYVHFCLNTVGGA*GCWEMG Trigger: TCCCATCTCCCAGCAACCCCAGGCCCCACCCACGGT...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR TCA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCCCTTATCCAAGTCAGTaGAGCACAGAGCTGACCCCT | + |
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Preference number: 2 (lower is better) Translates to: YGLSYFPELKKSRKQLWVPYPSQ*STELTP Trigger: AGGGGTCAGCTCTGTGCTTCACTGACTTGGATAAGG...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR GCA 90 bp | CACACACCACTGCACATGCTGGTAACATTTGCAACCTACATCTTTTTGTTTGCTTCAGTCAAGAAGCTGTaGCTGTGGAATGAGCGAGAC | + |
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Preference number: 2 (lower is better) Translates to: HTPLHMLVTFATYIFLFASVKKL*LWNERD Trigger: GTCTCGCTCATTCCACAGGCACAGCTTCTTGACTGA...AGCAAACAAAAAGATGTAGGTTGCAAATGTTACCAGCATGTGCAGTGGTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGTCTATAAAGAGCTTCGGTCAATGGACTCTTCAAGTATGTATGGTTGCACTGAGTGTGCTGAGTaGCGGGACTGTGCTAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: KTVYKELRSMDSSSMYGCTECAE*RDCASY Trigger: GTAACTAGCACAGTCCCGCCACTCAGCACACTCAGT...GCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGACTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCAACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAGAGACAGGAACAGTaGGTGGGGACGAGATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: KQHQGFTQTEELLRPLLFKRQEQ*VGTRCA Trigger: AGCACATCTCGTCCCCACCCACTGTTCCTGTCTCTT...AAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATGGGGTTGCTGGGAGATaGGACAGACAAGGAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: NTKALLKQKSYYVHFCLNGVAGR*DRQGRS Trigger: AGACCTTCCTTGTCTGTCCCATCTCCCAGCAACCCC...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGTCTATAAAGAGCTTCGGTCAATGGACTCTTCAAGTATGTATGGTTGCAAGAAGCTGTGCCTGTaGAATGAGCGAGACTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KTVYKELRSMDSSSMYGCKKLCL*NERDSL Trigger: CAGAGAGTCTCGCTCATTCCACAGGCACAGCTTCTT...GCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGACTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR TCA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCACATGTGGGTCAGGATaGCTCCACAGATTATATGGA | + |
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Preference number: 2 (lower is better) Translates to: YGLSYFPELKKSRKQLWVTCGSG*LHRLYG Trigger: TCCATATAATCTGTGGAGTCATCCTGACCCACATGT...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR GCA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCGGCCACATTTCCCAGTaGTACAGTCACAATACTTCT | + |
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Preference number: 2 (lower is better) Translates to: YGLSYFPELKKSRKQLWVGHISQ*YSHNTS Trigger: AGAAGTATTGTGACTGTAGCACTGGGAAATGTGGCC...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR TCA 90 bp | CACACACCACTGCACATGCTGGTAACATTTGCAACCTACATCTTTTTGTTTGCTAAACTAAACTGGTTTTaGAAATCCCTCTTCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: HTPLHMLVTFATYIFLFAKLNWF*KSLFHG Trigger: TCCATGGAAGAGGGATTTTCAAAACCAGTTTAGTTT...AGCAAACAAAAAGATGTAGGTTGCAAATGTTACCAGCATGTGCAGTGGTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCAACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTTTATATTACAATGACTaGCAGTTTAGAGTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KQHQGFTQTEELLRPLLFLYYND*QFRVSS Trigger: GGAAGAGACTCTAAACTGCCAGTCATTGTAATATAA...AAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTTGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 72 bp | GAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTaGGGCCTGGGGTTGCTGGGAGATGGGACAGACAAG | + |
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Preference number: 3 (lower is better) Translates to: EKKPHPTQIHRG*GLGLLGDGTDK Trigger: CTTGTCTGTCCCATCTCCCAGCAACCCCAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 72 bp | GATGCCAAATGTTCGATGGTCGGGCCCAAGGCAGCCTaGAGGACACTGAAGTGCTGCCACTGCTGCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: DAKCSMVGPKAA*RTLKCCHCCHQ Trigger: CTGGTGGCAGCAGTGGCAGCACTTCAGTGTCCTTCAGGCTGCCTTGGGCCCGACCATCGAACATTTGGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 72 bp | TCAAGAAGCTGTGCCTGTGGAATGAGCGAGACTCTCTaGCTGCCCTCCCTAGGACCTGCCATGAGCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: SRSCACGMSETL*LPSLGPAMSFL Trigger: CAGGAAGCTCATGGCAGGTCCTAGGGAGGGCAGCCAGAGAGTCTCGCTCATTCCACAGGCACAGCTTCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 72 bp | CATCCCTTCCTTATCCAAGTCAGTGAAGCACAGAGCTaGCCCCTCTGCACTGTGTGCAGATCGGCGGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: HPFLIQVSEAQS*PLCTVCRSAAL Trigger: GAGAGCCGCCGATCTGCACACAGTGCAGAGGGGTCAGCTCTGTGCTTCACTGACTTGGATAAGGAAGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 72 bp | TGGGGACGAGATGTGCTACGTTCAGTCAAGAAGCTGTaGCTGTGGAATGAGCGAGACTCTCTGGCTGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: WGRDVLRSVKKL*LWNERDSLAAL Trigger: GAGGGCAGCCAGAGAGTCTCGCTCATTCCACAGGCACAGCTTCTTGACTGAACGTAGCACATCTCGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 72 bp | CGAGATGTGCTACGTTCAGTCAAGAAGCTGTGCCTGTaGAATGAGCGAGACTCTCTGGCTGCCCTCCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: RDVLRSVKKLCL*NERDSLAALPR Trigger: CCTAGGGAGGGCAGCCAGAGAGTCTCGCTCATTCCACAGGCACAGCTTCTTGACTGAACGTAGCACATCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 72 bp | CCACCTCAGCTGAGACTGCAGGTAGGTGCTGAATGTTaGCTGGAATCAGCAGACAGGCAGGTCAGTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PPQLRLQVGAEC*LESADRQVSCW Trigger: CCAGCAACTGACCTGCCTGTCTGCTGATTCCAGTCAACATTCAGCACCTACCTGCAGTCTCAGCTGAGGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 72 bp | GCAATGAGTCCATCACCGCTCTTTTGCCCAACTCTATaGCACAGCTACAACAAGCTGGGGCACGGGCCACAT | + |
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Preference number: 3 (lower is better) Translates to: AMSPSPLFCPTL*HSYNKLGHGPH Trigger: ATGTGGCCCGTGCCCCAGCTTGTTGTAGCTGTGGCATAGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 72 bp | AGTTGGTGGGACAAAGCTAAGGTTCCATTGACTGGCTaGGATCTTGGCTCAGGCCCCACCTCAGCTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: SWWDKAKVPLTG*DLGSGPTSAET Trigger: AGTCTCAGCTGAGGTGGGGCCTGAGCCAAGATCTCAGCCAGTCAATGGAACCTTAGCTTTGTCCCACCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 72 bp | ATAGGAGAGGTCCCAGCAGCTCTAGGACCGTTAGAGTaGAGGCGGCGTTCAACAGTCTGTGATTTCCCCATT | + |
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Preference number: 3 (lower is better) Translates to: IGEVPAALGPLE*RRRSTVCDFPI Trigger: AATGGGGAAATCACAGACTGTTGAACGCCGCCTGCACTCTAACGGTCCTAGAGCTGCTGGGACCTCTCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 72 bp | TCTTTTGCCCAACTCTATGCCACAGCTACAACAAGCTaGGGCACGGGCCACATTTCCCAGTGCTACAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: SFAQLYATATTS*GTGHISQCYSH Trigger: GTGACTGTAGCACTGGGAAATGTGGCCCGTGCCCCAGCTTGTTGTAGCTGTGGCATAGAGTTGGGCAAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 72 bp | GACTGGCAGTTTAGAGTCTCTTCCCAGTTCCACTGCTaGTCCAGCCCAAAGAGGGCGAATCAGAGGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: DWQFRVSSQFHC*SSPKRANQRKR Trigger: TCTTTTCCTCTGATTCGCCCTCTTTGGGCTGGAGCAGCAGTGGAACTGGGAAGAGACTCTAAACTGCCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR CCA 72 bp | TTGGCATCTCAGCATGAGGGTTTCAGCAGCTGCAGATaGGGAGTGGCAAAGGGGCTACAGTGTGTGGTATTT | + |
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Preference number: 3 (lower is better) Translates to: LASQHEGFSSCR*GVAKGLQCVVF Trigger: AAATACCACACACTGTAGCCCCTTTGCCACTCCCCATCTGCAGCTGCTGAAACCCTCATGCTGAGATGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR TCA 72 bp | CATGATTTCCCATCATCCCTTCCTTATCCAAGTCAGTaGAGCACAGAGCTGACCCCTCTGCACTGTGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: HDFPSSLPYPSQ*STELTPLHCVQ Trigger: CTGCACACAGTGCAGAGGGGTCAGCTCTGTGCTTCACTGACTTGGATAAGGAAGGGATGATGGGAAATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| 3UTR GCA 72 bp | AATGACTGGCAGTTTAGAGTCTCTTCCCAGTTCCACTaGTGCTCCAGCCCAAAGAGGGCGAATCAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NDWQFRVSSQFH*CSSPKRANQRK Trigger: TTTCCTCTGATTCGCCCTCTTTGGGCTGGAGCAGCAGTGGAACTGGGAAGAGACTCTAAACTGCCAGTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR GCA 72 bp | GTATGTATGGTTGCAATGAGTCCATCACCGCTCTTTTaGCCAACTCTATGCCACAGCTACAACAAGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VCMVAMSPSPLF*PTLCHSYNKLG Trigger: CCCCAGCTTGTTGTAGCTGTGGCATAGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGCAACCATACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR CCA 72 bp | CCAAACATCAGAGTCACTAGGAAGAGACAGGAACAGTaGGTGGGGACGAGATGTGCTACGTTCAGTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PNIRVTRKRQEQ*VGTRCATFSQE Trigger: TTCTTGACTGAACGTAGCACATCTCGTCCCCACCCACTGTTCCTGTCTCTTCCTAGTGACTCTGATGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR GCA 72 bp | GCTACAACAAGCTGGGGCACGGGCCACATTTCCCAGTaGTACAGTCACAATACTTCTTTAAAAGCATCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: ATTSWGTGHISQ*YSHNTSLKASV Trigger: AACGGATGCTTTTAAAGAAGTATTGTGACTGTAGCACTGGGAAATGTGGCCCGTGCCCCAGCTTGTTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR TCA 72 bp | TCGGTCAATGGACTCTTCAAGTATGTATGGTTGCAATaGGTCCATCACCGCTCTTTTGCCCAACTCTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVNGLFKYVWLQ*VHHRSFAQLYA Trigger: GGCATAGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGCAACCATACATACTTGAAGAGTCCATTGACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR GCA 72 bp | GAGCTTCGGTCAATGGACTCTTCAAGTATGTATGGTTaGAATGAGTCCATCACCGCTCTTTTGCCCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELRSMDSSSMYG*NESITALLPNS Trigger: AGAGTTGGGCAAAAGAGCGGTGATGGACTCATTGCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAGTCTATAAAGAGCTTCGGTCAATGGACTCTTCAAGTATGTATGGTTGCCCTACATCTTTTTGTTaGCTCTCCACATTCATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KTVYKELRSMDSSSMYGCPTSFC*LSTFML Trigger: CAACATGAATGTGGAGAGCAAACAAAAAGATGTAGG...GCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGACTGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR CCA 72 bp | TTCAAACGTCTCATAACAACATACACACCTCTTTGCTaGCTTCACCCTAGCTGCACAATATATATATATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FKRLITTYTPLC*LHPSCTIYIYA Trigger: AGCATATATATATATTGTGCAGCTAGGGTGAAGCCAGCAAAGAGGTGTGTATGTTGTTATGAGACGTTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR CCA 72 bp | CCATTTACAAAACAGTCTATAAAGAGCTTCGGTCAATaGACTCTTCAAGTATGTATGGTTGCAATGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PFTKQSIKSFGQ*TLQVCMVAMSP Trigger: TGGACTCATTGCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGACTGTTTTGTAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| 3UTR GCA 72 bp | CTTTTCAAACGTCTCATAACAACATACACACCTCTTTaGTGGCTTCACCCTAGCTGCACAATATATATATAT | + |
|
Preference number: 3 (lower is better) Translates to: LFKRLITTYTPL*WLHPSCTIYIY Trigger: ATATATATATATTGTGCAGCTAGGGTGAAGCCAGCAAAGAGGTGTGTATGTTGTTATGAGACGTTTGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | AAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTGGGGCCTGCGCCGGACGCCGCCCTaGCTCCCCTCTTGCCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPKEKKPHPTQIHRGWGLRRTPP*LPSCPP Trigger: AGGCGGGCAAGAGGGGAGTCAGGGCGGCGTCCGGCG...CAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTCCCCTCTTGCCCGCCTaGCAGTGGGACCGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGKHKPKEKKPHPTQIHRPLLPA*QWDRHC Trigger: GCAGTGGCGGTCCCACTGGCAGGCGGGCAAGAGGGG...ACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGATGAGAGGGAAGAAGATGGCAGCCGCCCAGTCCCACTCTCTGCAAGGGTCCGCTTCTTTACCATaGTGGTCCCCCGGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRMRGKKMAAAQSHSLQGSASLP*WSPGFH Trigger: GTGGAAGCCGGGGGACCACCATGGTAAAGAAGCGGA...CCCTTGCAGAGAGTGGGACTGGGCGGCTGCCATCTTCTTCCCTCTCATCCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTGATGGAGAGGCCACTGAGGGCATTCACCAGCAGGAGAAAAACTGTGACCTGTCTCTGTCTGAGCTaGCCGAGGAGGCAGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVMERPLRAFTSRRKTVTCLCLS*PRRQLC Trigger: ACAAAGCTGCCTCCTCGGGCAGCTCAGACAGAGACA...GGTCACAGTTTTTCTCCTGCTGGTGAATGCCCTCAGTGGCCTCTCCATCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | AAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTGGGGCCTGGCAAAGAAGGGCATGTaGCACCAGCGCTCTAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KPKEKKPHPTQIHRGWGLAKKGM*HQRSSL Trigger: TAAGCTAGAGCGCTGGTGTCACATGCCCTTCTTTGC...CAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTGATGGAGAGGCCACTGAGGGCATTCACCAGCAGGAGAAAAACTGTGACCTTTCCACAACACCCGTaGTCTCAGCCACCCGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVMERPLRAFTSRRKTVTFPQHP*SQPPGK Trigger: TTTACCGGGTGGCTGAGATCACGGGTGTTGTGGAAA...GGTCACAGTTTTTCTCCTGCTGGTGAATGCCCTCAGTGGCCTCTCCATCACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGCCAGGTTCTCGTCACTaGCGCTGTCTTCCGTATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RANTNLKRRSPIQPRSTVPGSRH*RCLPYP Trigger: CGGATACGGAAGACAGCGGCAGTGACGAGAACCTGG...CACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGATGAGAGGGAAGAAGATGGCAGCCGCCCAGTCCCACTCTCTGCAAGGGGCAGCTTTGTTGGCTTaGTTCTTCATGGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRMRGKKMAAAQSHSLQGAALLA*FFMAPF Trigger: GAAAGGAGCCATGAAGAAGCAAGCCAACAAAGCTGC...CCCTTGCAGAGAGTGGGACTGGGCGGCTGCCATCTTCTTCCCTCTCATCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGTGTTTGGCTTTGTCCTaGTCTCCCAGGTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RANTNLKRRSPIQPRSTVCLALS*SPRSSA Trigger: GGCTGAGGACCTGGGAGATCAGGACAAAGCCAAACA...CACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTGGGGCCTGCCCGGTAAACTGGCTTaGTATTGTGGTTTCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KPKEKKPHPTQIHRGWGLPGKLA*YCGFQC Trigger: GCATTGGAAACCACAATAGCAAGCCAGTTTACCGGG...CAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTGATGGAGAGGCCACTGAGGGCATTCACCAGCAGGAGAAAAACTGTGACCTTGCCATGCCGTAGCTaGAGCCCTTTATTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVMERPLRAFTSRRKTVTLPCRS*SPLFVL Trigger: CAGAACAAATAAAGGGCTCCAGCTACGGCATGGCAA...GGTCACAGTTTTTCTCCTGCTGGTGAATGCCCTCAGTGGCCTCTCCATCACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTAGCTCCGTCCTTGGCTaGTGGGGCTTTGGAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EGKHKPKEKKPHPTQIHRSSVLG*WGFGGN Trigger: ATTACCTCCAAAGCCCCACCAGCCAAGGACGGAGCT...ACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGATGAGAGGGAAGAAGATGGCAGCCGCCCAGTCCCACTCTCTGCAAGGGCTTTATTTGTTCTGGTaGCACCCAGCTGGTAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRMRGKKMAAAQSHSLQGLYLFW*HPAGKL Trigger: AAGTTTACCAGCTGGGTGGCACCAGAACAAATAAAG...CCCTTGCAGAGAGTGGGACTGGGCGGCTGCCATCTTCTTCCCTCTCATCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | CACACACCACTGCACATGCTGGTAACATTTGCAACCTACATCTTTTTGTTTGCTGATGAGGCTGCAGGCTaGCTCACAGGAGGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTPLHMLVTFATYIFLFADEAAG*LTGGSF Trigger: GAAGGAGCCTCCTGTGAGTCAGCCTGCAGCCTCATC...AGCAAACAAAAAGATGTAGGTTGCAAATGTTACCAGCATGTGCAGTGGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCTCTTCCCAGTTCCACTGCTGCTCCAGCCCAAAGAGGGCGAATCAGAACTGGCTTGCTATTGTaGTTTCCAATGCCAATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LESLPSSTAAPAQRGRIRTGLLL*FPMPIR Trigger: ACGGATTGGCATTGGAAACCACAATAGCAAGCCAGT...TCTGATTCGCCCTCTTTGGGCTGGAGCAGCAGTGGAACTGGGAAGAGACTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCTCGGAGCTCCGTCCTTaGCTGGTGGGGCTTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YGLSYFPELKKSRKQLWVSELRP*LVGLWR Trigger: CCTCCAAAGCCCCACCAGCCAAGGACGGAGCTCCGA...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCTTTACACCTGAGAATGATTATCAAGCAGTCAGCTTCTTTTCAAACGTCTTCTCCTCGGAGTCACTaGGCTTCCGTTTCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GALHLRMIIKQSASFQTSSPRSH*ASVSPG Trigger: CCCTGGCGAAACGGAAGCGCAGTGACTCCGAGGAGA...AGACGTTTGAAAAGAAGCTGACTGCTTGATAATCATTCTCAGGTGTAAAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCTTTACACCTGAGAATGATTATCAAGCAGTCAGCTTCTTTTCAAACGTCTGCTTCTTTACCATGGTaGTCCCCCGGCTTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GALHLRMIIKQSASFQTSASLPW*SPGFHA Trigger: GGCGTGGAAGCCGGGGGACCACCATGGTAAAGAAGC...AGACGTTTGAAAAGAAGCTGACTGCTTGATAATCATTCTCAGGTGTAAAGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAGTCTCTTCCCAGTTCCACTGCTGCTCCAGCCCAAAGAGGGCGAATCAGACATAGCATAGTTTGGTaGGGCTTTTCTGAACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LESLPSSTAAPAQRGRIRHSIVW*GFSEPF Trigger: GAAAGGTTCAGAAAAGCCCCACCAAACTATGCTATG...TCTGATTCGCCCTCTTTGGGCTGGAGCAGCAGTGGAACTGGGAAGAGACTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGGAGGGAAGTCACACAGCTACAGCAGTCAGGCCTGTTTAGTAAGAAGAATAACCGTATTTTGCATTaGGCTGGGCCAAAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGREVTQLQQSGLFSKKNNRILH*AGPKWQ Trigger: CTGCCATTTTGGCCCAGCTCAATGCAAAATACGGTT...ATTCTTCTTACTAAACAGGCCTGACTGCTGTAGCTGTGTGACTTCCCTCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCACACTCGCTGGTCATTaGCATGCCGTAGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YGLSYFPELKKSRKQLWVTLAGH*HAVAGA Trigger: GGCTCCAGCTACGGCATGGCAATGACCAGCGAGTGT...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAGGGAAGTCACACAGCTACAGCAGTCAGGCCTGTTTAGTAAGAAGAATCCCAGAACCGTATTTTaGATTGAGCTGGGCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGREVTQLQQSGLFSKKNPRTVF*IELGQN Trigger: ATTTTGGCCCAGCTCAATGCAAAATACGGTTCTGGG...ATTCTTCTTACTAAACAGGCCTGACTGCTGTAGCTGTGTGACTTCCCTCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGTCTATAAAGAGCTTCGGTCAATGGACTCTTCAAGTATGTATGGTTGCAGGCGGAACACTCGCTaGTCATTGCCATGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTVYKELRSMDSSSMYGCRRNTR*SLPCRS Trigger: GCTACGGCATGGCAATGACCAGCGAGTGTTCCGCCT...GCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGACTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGTCATTTAGCTGGTCTTaGATTTGTTTGGCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RANTNLKRRSPIQPRSTVSFSWS*ICLALS Trigger: GGACAAAGCCAAACAAATCCAAGACCAGCTAAATGA...CACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAGGGAAGTCACACAGCTACAGCAGTCAGGCCTGTTTAGTAAGAAGAATTTCACGTCAAAGTCATaGACTTTGAACAGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGREVTQLQQSGLFSKKNFTSKS*TLNRSS Trigger: GGAAGACCTGTTCAAAGTGCATGACTTTGACGTGAA...ATTCTTCTTACTAAACAGGCCTGACTGCTGTAGCTGTGTGACTTCCCTCCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCTTTACACCTGAGAATGATTATCAAGCAGTCAGCTTCTTTTCAAACGTCTTGGTTTCTCATGTTGTaGCTTTCAGCCACCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GALHLRMIIKQSASFQTSWFLML*LSATRA Trigger: GGCTCTGGTGGCTGAAAGTCACAACATGAGAAACCA...AGACGTTTGAAAAGAAGCTGACTGCTTGATAATCATTCTCAGGTGTAAAGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR TCA 90 bp | CACACACCACTGCACATGCTGGTAACATTTGCAACCTACATCTTTTTGTTTGCTCAAAGTCATGCACTTTaGACAGGTCTTCCGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTPLHMLVTFATYIFLFAQSHAL*TGLPRG Trigger: ACCTCTCGGAAGACCTGTTCAAAGTGCATGACTTTG...AGCAAACAAAAAGATGTAGGTTGCAAATGTTACCAGCATGTGCAGTGGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AGACAGCATGAGCTAGGTATATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGCCTTTCCTTGACCCTTaGTCATTTCCTTTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQHELGIWTLLLPRTEKEPFLDP*SFPLEH Trigger: ATGCTCCAAAGGAAATGAGCAAGGGTCAAGGAAAGG...CTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATATACCTAGCTCATGCTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGTCTATAAAGAGCTTCGGTCAATGGACTCTTCAAGTATGTATGGTTGCAGCCACCCGGTAAACTaGCTTGCTATTGTGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTVYKELRSMDSSSMYGCSHPVN*LAIVVS Trigger: GGAAACCACAATAGCAAGCCAGTTTACCGGGTGGCT...GCAACCATACATACTTGAAGAGTCCATTGACCGAAGCTCTTTATAGACTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR GCA 90 bp | AAGCAACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTTCTAGTGTGGGCAACTaGATGCCAGCAGAAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: KQHQGFTQTEELLRPLLFSSVGN*MPAENI Trigger: GATGTTTTCTGCTGGCATGCAGTTGCCCACACTAGA...AAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATAGGAGGCAGCTTTGTTaGCTTGCTTCTTCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTKALLKQKSYYVHFCLNRRQLC*LASSWL Trigger: GAGCCATGAAGAAGCAAGCCAACAAAGCTGCCTCCT...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCCTTCATAGCATAGTTTaGTGGGGCTTTTCTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YGLSYFPELKKSRKQLWVLHSIV*WGFSEP Trigger: AGGTTCAGAAAAGCCCCACCAAACTATGCTATGAAG...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AGACAGCATGAGCTAGGTATATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGCTTTTAGCTCCTCCATaGCTTGAGATTTCTTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RQHELGIWTLLLPRTEKELLAPP*LEISYL Trigger: TAGATAAGAAATCTCAAGCCATGGAGGAGCTAAAAG...CTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATATACCTAGCTCATGCTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATGCCCTTTATTTGTTCTaGTGCCACCCAGCTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTKALLKQKSYYVHFCLNALYLF*CHPAGK Trigger: TTTACCAGCTGGGTGGCACCAGAACAAATAAAGGGC...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | GGAGCTTTACACCTGAGAATGATTATCAAGCAGTCAGCTTCTTTTCAAACGTCTTCTAGCTCATTTAGCTaGTCTTGGATTTGTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GALHLRMIIKQSASFQTSSSSFS*SWICLA Trigger: AGCCAAACAAATCCAAGACCAGCTAAATGAGCTAGA...AGACGTTTGAAAAGAAGCTGACTGCTTGATAATCATTCTCAGGTGTAAAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATGGTCCGATTTCTCACTaGACTTGTCATCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTKALLKQKSYYVHFCLNGPISH*TCHHLP Trigger: AGGAAGATGATGACAAGTCCAGTGAGAAATCGGACC...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS-3UTR CCA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATGTTTTTCATCCCGCTTaGAACGCCGTTCTTTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTKALLKQKSYYVHFCLNVFHPA*NAVLYC Trigger: ACAATAAAGAACGGCGTTCCAAGCGGGATGAAAAAC...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CCA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATCAGAGTAGACCTCACTaGTTTTCAATGGCTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTKALLKQKSYYVHFCLNQSRPH*FSMAVF Trigger: AAAAACAGCCATTGAAAACCAGTGAGGTCTACTCTG...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 90 bp | CCGGCTTCCACGCCGGACGCCGCCCTGACTCCCCTCTTGCCCGCCTaGCAGTGGGACCGCCACTGCCGCCGCCGCCACCGCCGCCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PASTPDAALTPLLPA*QWDRHCRRRHRRRH Trigger: GTGGCGGCGGCGGTGGCGGCGGCGGCAGTGGCGGTCCCACTGGCAGGCGGGCAAGAGGGGAGTCAGGGCGGCGTCCGGCGTGGAAGCCGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 90 bp | TTCTTTACCATGGTGGTCCCCCGGCTTCCACGCCGGACGCCGCCCTaGCTCCCCTCTTGCCCGCCTGCCAGTGGGACCGCCACTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FFTMVVPRLPRRTPP*LPSCPPASGTATAA Trigger: GGCGGCAGTGGCGGTCCCACTGGCAGGCGGGCAAGAGGGGAGTCAGGGCGGCGTCCGGCGTGGAAGCCGGGGGACCACCATGGTAAAGAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 90 bp | CCGTATCCGAGTCGATCACGACACGGCCTTTCCGCTTCTTTACCATaGTGGTCCCCCGGCTTCCACGCCGGACGCCGCCCTGACTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PYPSRSRHGLSASLP*WSPGFHAGRRPDSP Trigger: AGGGGAGTCAGGGCGGCGTCCGGCGTGGAAGCCGGGGGACCACCATGGTAAAGAAGCGGAAAGGCCGTGTCGTGATCGACTCGGATACGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 90 bp | TATCCGAGTCGATCACGACACGGCCTTTCCGCTTCTTTACCATGGTaGTCCCCCGGCTTCCACGCCGGACGCCGCCCTGACTCCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YPSRSRHGLSASLPW*SPGFHAGRRPDSPL Trigger: AAGAGGGGAGTCAGGGCGGCGTCCGGCGTGGAAGCCGGGGGACCACCATGGTAAAGAAGCGGAAAGGCCGTGTCGTGATCGACTCGGATA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 90 bp | TCCGTTTCGCCAGGGACAAGAGCTCCTGATCCAGGTTCTCGTCACTaGCGCTGTCTTCCGTATCCGAGTCGATCACGACACGGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSPGTRAPDPGSRH*RCLPYPSRSRHGLS Trigger: GGAAAGGCCGTGTCGTGATCGACTCGGATACGGAAGACAGCGGCAGTGACGAGAACCTGGATCAGGAGCTCTTGTCCCTGGCGAAACGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 90 bp | CTTCCTCAGGGGCAGAGCTCTCAGCTGAGCTGTCTCTGTCTGAGCTaGCCGAGGAGGCAGCTTTGTTGGCTTGCTTCTTCATGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPQGQSSQLSCLCLS*PRRQLCWLASSWLL Trigger: AAGGAGCCATGAAGAAGCAAGCCAACAAAGCTGCCTCCTCGGGCAGCTCAGACAGAGACAGCTCAGCTGAGAGCTCTGCCCCTGAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 90 bp | TCATCATCACTGTCGGAGGTCTCTGAATCTGATGAGGCTGCAGGCTaGCTCACAGGAGGCTCCTTCTCCTCGGAGTCACTGCGCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSEVSESDEAAG*LTGGSFSSESLRFR Trigger: ACGGAAGCGCAGTGACTCCGAGGAGAAGGAGCCTCCTGTGAGTCAGCCTGCAGCCTCATCAGATTCAGAGACCTCCGACAGTGATGATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTGGGGCCTGGAGGAGGCAGCTTTGTaGGCTTGCTTCTTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KPKEKKPHPTQIHRGWGLEEAAL*ACFFMA Trigger: AGCCATGAAGAAGCAAGCCAACAAAGCTGCCTCCTC...CAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 90 bp | TCTATGCGGTTGAAGAGCTCCTGCTCCCTCTCCTTCTCCGTCATCTaGTCCAGTCGGGCCCTATCTTCCTCATCTCCCATAAGATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMRLKSSCSLSFSVI*SSRALSSSSPIRSS Trigger: AGAGGATCTTATGGGAGATGAGGAAGATAGGGCCCGACTGGAGCAGATGACGGAGAAGGAGAGGGAGCAGGAGCTCTTCAACCGCATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 90 bp | CTCGCTGGTCATTGCCATGCCGTAGCTGGAGCCCTTTATTTGTTCTaGTGCCACCCAGCTGGTAAACTTTGGCAGTTTCCACAACACCCG | + |
|
Preference number: 5 (lower is better) Translates to: LAGHCHAVAGALYLF*CHPAGKLWQFPQHP Trigger: CGGGTGTTGTGGAAACTGCCAAAGTTTACCAGCTGGGTGGCACCAGAACAAATAAAGGGCTCCAGCTACGGCATGGCAATGACCAGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AGAAGGATGAGAGGGAAGAAGATGGCAGCCGCCCAGTCCCACTCTCTGCAAGGGTCAGTGAATTCTTGGTaGGACACAAACTCTAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRMRGKKMAAAQSHSLQGSVNSW*DTNSRR Trigger: CCGCCTAGAGTTTGTGTCCAACCAAGAATTCACTGA...CCCTTGCAGAGAGTGGGACTGGGCGGCTGCCATCTTCTTCCCTCTCATCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GGAGCTTTACACCTGAGAATGATTATCAAGCAGTCAGCTTCTTTTCAAACGTCTGCCCTGACTCCCCTCTaGCCCGCCTGCCAGTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GALHLRMIIKQSASFQTSALTPL*PACQWD Trigger: GTCCCACTGGCAGGCGGGCAAGAGGGGAGTCAGGGC...AGACGTTTGAAAAGAAGCTGACTGCTTGATAATCATTCTCAGGTGTAAAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GAGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTCTCTTCTCTATGCGGTaGAAGAGCTCCTGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EGKHKPKEKKPHPTQIHRLFSMR*KSSCSL Trigger: GAGGGAGCAGGAGCTCTTCAACCGCATAGAGAAGAG...ACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGATAGCAGATATGTTCTaGGTCCGCTGGCGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RANTNLKRRSPIQPRSTVIADMF*VRWRSR Trigger: CCTGGACCGCCAGCGGACCAAGAACATATCTGCTAT...CACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GGGGTGATGGAGAGGCCACTGAGGGCATTCACCAGCAGGAGAAAAACTGTGACCGAACCGTATTTTGCATaGAGCTGGGCCAAAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVMERPLRAFTSRRKTVTEPYFA*SWAKMA Trigger: TGCCATTTTGGCCCAGCTCAATGCAAAATACGGTTC...GGTCACAGTTTTTCTCCTGCTGGTGAATGCCCTCAGTGGCCTCTCCATCACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 90 bp | ATTCTTGGTTGGACACAAACTCTAGGCGGAACACTCGCTGGTCATTaGCATGCCGTAGCTGGAGCCCTTTATTTGTTCTGGTGCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ILGWTQTLGGTLAGH*HAVAGALYLFWCHP Trigger: TGGGTGGCACCAGAACAAATAAAGGGCTCCAGCTACGGCATGGCAATGACCAGCGAGTGTTCCGCCTAGAGTTTGTGTCCAACCAAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | TTAGAGTCTCTTCCCAGTTCCACTGCTGCTCCAGCCCAAAGAGGGCGAATCAGATTCAATGGCTGTTTTTaGGCGAGGAGCTCAGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LESLPSSTAAPAQRGRIRFNGCF*ARSSAV Trigger: AACAGCTGAGCTCCTCGCCAAAAAACAGCCATTGAA...TCTGATTCGCCCTCTTTGGGCTGGAGCAGCAGTGGAACTGGGAAGAGACTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGGTGGGGCCTGAGACTGGCTGTGATTTaGGAGGGATTTCTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KPKEKKPHPTQIHRGWGLRLAVI*EGFLLS Trigger: AGAAAGAAGAAATCCCTCCAAAATCACAGCCAGTCT...CAGGCCCCACCCACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTGGATTTCTCACTGGACTaGTCATCATCTTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RANTNLKRRSPIQPRSTVDFSLD*SSSSSS Trigger: GGAGGAGGAAGATGATGACAAGTCCAGTGAGAAATC...CACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GAGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTCCTTGCTCATTTCCTTaGGAGCATCTGGTAATACCC | + |
|
Preference number: 5 (lower is better) Translates to: EGKHKPKEKKPHPTQIHRPCSFP*EHLVIP Trigger: GGGTATTACCAGATGCTCCAAAGGAAATGAGCAAGG...ACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GAGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTAGTTTTTCATCCCGCTaGGAACGCCGTTCTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: EGKHKPKEKKPHPTQIHRSFSSR*ERRSLL Trigger: CAATAAAGAACGGCGTTCCAAGCGGGATGAAAAACT...ACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 90 bp | ATCCGTACAAAACATCCTGTGACAGTTTTAGCAAAGAAGGGCATGTaGCACCAGCGCTCTAGCTTATGCCGTGATAACCGAACCCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: IRTKHPVTVLAKKGM*HQRSSLCRDNRTRF Trigger: GAATCGGGTTCGGTTATCACGGCATAAGCTAGAGCGCTGGTGTCACATGCCCTTCTTTGCTAAAACTGTCACAGGATGTTTTGTACGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AGACAGCATGAGCTAGGTATATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGGCTGGAGCCCTTTATTaGTTCTGGTGCCACCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQHELGIWTLLLPRTEKEAGALY*FWCHPA Trigger: AGCTGGGTGGCACCAGAACAAATAAAGGGCTCCAGC...CTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATATACCTAGCTCATGCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AGAGGGAGGGAAGTCACACAGCTACAGCAGTCAGGCCTGTTTAGTAAGAAGAATGAAGGGGTCCATCTGTaGGTTTCTCATGTTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RGREVTQLQQSGLFSKKNEGVHL*VSHVVT Trigger: AGTCACAACATGAGAAACCAACAGATGGACCCCTTC...ATTCTTCTTACTAAACAGGCCTGACTGCTGTAGCTGTGTGACTTCCCTCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GAGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTCTTTTGACTCTGAGCTaGGAACCTGTAAGTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: EGKHKPKEKKPHPTQIHRLLTLS*EPVSQS Trigger: AGATTGACTTACAGGTTCCAAGCTCAGAGTCAAAAG...ACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | AACACCAAGGCTTTACTCAAACAGAAGAGCTATTACGTCCACTTTTGTTTAAATCTCGGAGCTCCGTCCTaGGCTGGTGGGGCTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTKALLKQKSYYVHFCLNLGAPS*AGGALE Trigger: CTCCAAAGCCCCACCAGCCAAGGACGGAGCTCCGAG...ATTTAAACAAAAGTGGACGTAATAGCTCTTCTGTTTGAGTAAAGCCTTGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 90 bp | GACTCTGAGCTTGGAACCTGTAAGTCAATCTTCACGTCAAAGTCATaGACTTTGAACAGGTCTTCCGAGAGGTCACTGGCTGTCTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DSELGTCKSIFTSKS*TLNRSSERSLAVLE Trigger: TTCTAAGACAGCCAGTGACCTCTCGGAAGACCTGTTCAAAGTGCATGACTTTGACGTGAAGATTGACTTACAGGTTCCAAGCTCAGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GAGGGCAAACACAAACCTAAAGAGAAGAAGCCCCATCCAACCCAGATCCACCGTATCTTTATCCTTTCCTaGACCCTTGCTCATTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGKHKPKEKKPHPTQIHRIFILS*TLAHFL Trigger: AAGGAAATGAGCAAGGGTCAAGGAAAGGATAAAGAT...ACGGTGGATCTGGGTTGGATGGGGCTTCTTCTCTTTAGGTTTGTGTTTGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | GGAGCTTTACACCTGAGAATGATTATCAAGCAGTCAGCTTCTTTTCAAACGTCTTTGGCTGGTGGGGCTTaGGAGGTAATGGCCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GALHLRMIIKQSASFQTSLAGGA*EVMAKA Trigger: AGCTTTGGCCATTACCTCCAAAGCCCCACCAGCCAA...AGACGTTTGAAAAGAAGCTGACTGCTTGATAATCATTCTCAGGTGTAAAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 90 bp | AACATCGCTTCTTTCCACTTCATGAATTCACTTTCAGTGAATTCTTaGTTGGACACAAACTCTAGGCGGAACACTCGCTGGTCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NIASFHFMNSLSVNS*LDTNSRRNTRWSLP Trigger: TGGCAATGACCAGCGAGTGTTCCGCCTAGAGTTTGTGTCCAACCAAGAATTCACTGAAAGTGAATTCATGAAGTGGAAAGAAGCGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS-3UTR CAA 90 bp | TATGGACTCTCTTACTTCCCAGAACTGAAAAAGAGTAGAAAACAGCTTTGGGTCTCAAAGTCATGCACTTaGAACAGGTCTTCCGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YGLSYFPELKKSRKQLWVSKSCT*NRSSER Trigger: CCTCTCGGAAGACCTGTTCAAAGTGCATGACTTTGA...GACCCAAAGCTGTTTTCTACTCTTTTTCAGTTCTGGGAAGTAAGAGAGTCCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 72 bp | CCGGCTTCCACGCCGGACGCCGCCCTGACTCCCCTCTaGCCCGCCTGCCAGTGGGACCGCCACTGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PASTPDAALTPL*PACQWDRHCRR Trigger: GCGGCGGCAGTGGCGGTCCCACTGGCAGGCGGGCAAGAGGGGAGTCAGGGCGGCGTCCGGCGTGGAAGCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 72 bp | ATGGTGGTCCCCCGGCTTCCACGCCGGACGCCGCCCTaGCTCCCCTCTTGCCCGCCTGCCAGTGGGACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: MVVPRLPRRTPP*LPSCPPASGTA Trigger: GGCGGTCCCACTGGCAGGCGGGCAAGAGGGGAGTCAGGGCGGCGTCCGGCGTGGAAGCCGGGGGACCACCAT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 72 bp | CGATCACGACACGGCCTTTCCGCTTCTTTACCATGGTaGTCCCCCGGCTTCCACGCCGGACGCCGCCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RSRHGLSASLPW*SPGFHAGRRPD Trigger: GTCAGGGCGGCGTCCGGCGTGGAAGCCGGGGGACCACCATGGTAAAGAAGCGGAAAGGCCGTGTCGTGATCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 72 bp | AGTCGATCACGACACGGCCTTTCCGCTTCTTTACCATaGTGGTCCCCCGGCTTCCACGCCGGACGCCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSRHGLSASLP*WSPGFHAGRRP Trigger: AGGGCGGCGTCCGGCGTGGAAGCCGGGGGACCACCATGGTAAAGAAGCGGAAAGGCCGTGTCGTGATCGACT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 72 bp | CTGTCGGAGGTCTCTGAATCTGATGAGGCTGCAGGCTaGCTCACAGGAGGCTCCTTCTCCTCGGAGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LSEVSESDEAAG*LTGGSFSSESL Trigger: CAGTGACTCCGAGGAGAAGGAGCCTCCTGTGAGTCAGCCTGCAGCCTCATCAGATTCAGAGACCTCCGACAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 72 bp | CCAGGGACAAGAGCTCCTGATCCAGGTTCTCGTCACTaGCGCTGTCTTCCGTATCCGAGTCGATCACGACAC | + |
|
Preference number: 6 (lower is better) Translates to: PGTRAPDPGSRH*RCLPYPSRSRH Trigger: GTGTCGTGATCGACTCGGATACGGAAGACAGCGGCAGTGACGAGAACCTGGATCAGGAGCTCTTGTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 72 bp | GGGCAGAGCTCTCAGCTGAGCTGTCTCTGTCTGAGCTaGCCGAGGAGGCAGCTTTGTTGGCTTGCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GQSSQLSCLCLS*PRRQLCWLASS Trigger: TGAAGAAGCAAGCCAACAAAGCTGCCTCCTCGGGCAGCTCAGACAGAGACAGCTCAGCTGAGAGCTCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 72 bp | ACAGCTGGATCCCTGGAATTAGAGACGATGGTGGGTTaGCACTGCCGCCTGGTGAAGGGGTCCATCTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TAGSLELETMVG*HCRLVKGSICW Trigger: CCAACAGATGGACCCCTTCACCAGGCGGCAGTGCAAACCCACCATCGTCTCTAATTCCAGGGATCCAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 72 bp | TTGAAGAGCTCCTGCTCCCTCTCCTTCTCCGTCATCTaGTCCAGTCGGGCCCTATCTTCCTCATCTCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: LKSSCSLSFSVI*SSRALSSSSPI Trigger: TATGGGAGATGAGGAAGATAGGGCCCGACTGGAGCAGATGACGGAGAAGGAGAGGGAGCAGGAGCTCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 72 bp | GGATCCCTGGAATTAGAGACGATGGTGGGTTTGCACTaGCGCCTGGTGAAGGGGTCCATCTGTTGGTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSLELETMVGLH*RLVKGSICWFL Trigger: GAGAAACCAACAGATGGACCCCTTCACCAGGCGGCAGTGCAAACCCACCATCGTCTCTAATTCCAGGGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 72 bp | GGGTTTGCACTGCCGCCTGGTGAAGGGGTCCATCTGTaGGTTTCTCATGTTGTGACTTTCAGCCACCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GFALPPGEGVHL*VSHVVTFSHQS Trigger: GCTCTGGTGGCTGAAAGTCACAACATGAGAAACCAACAGATGGACCCCTTCACCAGGCGGCAGTGCAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
||
| CDS CAA 72 bp | GATCTCCTCGGAGCTCCGTCCTTGGCTGGTGGGGCTTaGGAGGTAATGGCCAAAGCTTTTGACTCTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: DLLGAPSLAGGA*EVMAKAFDSEL Trigger: AAGCTCAGAGTCAAAAGCTTTGGCCATTACCTCCAAAGCCCCACCAGCCAAGGACGGAGCTCCGAGGAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 90 bp | GACGATGGTGGGTTTGCACTGCCGCCTGGTGAAGGGGTCCATCTGTaGGTTTCTCATGTTGTGACTTTCAGCCACCAGAGCCTTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DDGGFALPPGEGVHL*VSHVVTFSHQSLLR Trigger: TCTGAGAAGGCTCTGGTGGCTGAAAGTCACAACATGAGAAACCAACAGATGGACCCCTTCACCAGGCGGCAGTGCAAACCCACCATCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 72 bp | GCTGGTCATTGCCATGCCGTAGCTGGAGCCCTTTATTaGTTCTGGTGCCACCCAGCTGGTAAACTTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGHCHAVAGALY*FWCHPAGKLWQ Trigger: CTGCCAAAGTTTACCAGCTGGGTGGCACCAGAACAAATAAAGGGCTCCAGCTACGGCATGGCAATGACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 72 bp | TCTTCTAAGTTCAGAGATCTCCTCGGAGCTCCGTCCTaGGCTGGTGGGGCTTTGGAGGTAATGGCCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSKFRDLLGAPS*AGGALEVMAKA Trigger: AGCTTTGGCCATTACCTCCAAAGCCCCACCAGCCAAGGACGGAGCTCCGAGGAGATCTCTGAACTTAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 90 bp | AAGTTCAGAGATCTCCTCGGAGCTCCGTCCTTGGCTGGTGGGGCTTaGGAGGTAATGGCCAAAGCTTTTGACTCTGAGCTTGGAACCTGT | + |
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Preference number: 6 (lower is better) Translates to: KFRDLLGAPSLAGGA*EVMAKAFDSELGTC Trigger: ACAGGTTCCAAGCTCAGAGTCAAAAGCTTTGGCCATTACCTCCAAAGCCCCACCAGCCAAGGACGGAGCTCCGAGGAGATCTCTGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 72 bp | TGCATTGAGCTGGGCCAAAATGGCAGCCTGAACAGCTaGATCCCTGGAATTAGAGACGATGGTGGGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: CIELGQNGSLNS*IPGIRDDGGFA Trigger: TGCAAACCCACCATCGTCTCTAATTCCAGGGATCCAGCTGTTCAGGCTGCCATTTTGGCCCAGCTCAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 72 bp | CCAGCTGGTAAACTTTGGCAGTTTCCACAACACCCGTaGTCTCAGCCACCCGGTAAACTGGCTTGCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: PAGKLWQFPQHP*SQPPGKLACYC Trigger: ACAATAGCAAGCCAGTTTACCGGGTGGCTGAGATCACGGGTGTTGTGGAAACTGCCAAAGTTTACCAGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 72 bp | TGCCATGCCGTAGCTGGAGCCCTTTATTTGTTCTGGTaGCACCCAGCTGGTAAACTTTGGCAGTTTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: CHAVAGALYLFW*HPAGKLWQFPQ Trigger: TTGTGGAAACTGCCAAAGTTTACCAGCTGGGTGGCACCAGAACAAATAAAGGGCTCCAGCTACGGCATGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 72 bp | CATTGCCATGCCGTAGCTGGAGCCCTTTATTTGTTCTaGTGCCACCCAGCTGGTAAACTTTGGCAGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HCHAVAGALYLF*CHPAGKLWQFP Trigger: TGGAAACTGCCAAAGTTTACCAGCTGGGTGGCACCAGAACAAATAAAGGGCTCCAGCTACGGCATGGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 72 bp | TCTTGGTTGGACACAAACTCTAGGCGGAACACTCGCTaGTCATTGCCATGCCGTAGCTGGAGCCCTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: SWLDTNSRRNTR*SLPCRSWSPLF Trigger: AAATAAAGGGCTCCAGCTACGGCATGGCAATGACCAGCGAGTGTTCCGCCTAGAGTTTGTGTCCAACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 72 bp | ATCTTCTTTTCAACACCTCTCTCTTCTCTATGCGGTTaGAGAGCTCCTGCTCCCTCTCCTTCTCCGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: IFFSTPLSSLCG*RAPAPSPSPSS Trigger: AGATGACGGAGAAGGAGAGGGAGCAGGAGCTCTTCAACCGCATAGAGAAGAGAGAGGTGTTGAAAAGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS TCA 72 bp | AAACATCCTGTGACAGTTTTAGCAAAGAAGGGCATGTaGCACCAGCGCTCTAGCTTATGCCGTGATAACCGA | + |
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Preference number: 6 (lower is better) Translates to: KHPVTVLAKKGM*HQRSSLCRDNR Trigger: TCGGTTATCACGGCATAAGCTAGAGCGCTGGTGTCACATGCCCTTCTTTGCTAAAACTGTCACAGGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS GCA 72 bp | CTTGGAACCTGTAAGTCAATCTTCACGTCAAAGTCATaGACTTTGAACAGGTCTTCCGAGAGGTCACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LGTCKSIFTSKS*TLNRSSERSLA Trigger: AGCCAGTGACCTCTCGGAAGACCTGTTCAAAGTGCATGACTTTGACGTGAAGATTGACTTACAGGTTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 90 bp | ATCGCTTCTTTCCACTTCATGAATTCACTTTCAGTGAATTCTTGGTaGGACACAAACTCTAGGCGGAACACTCGCTGGTCATTGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: IASFHFMNSLSVNSW*DTNSRRNTRWSLPC Trigger: GCATGGCAATGACCAGCGAGTGTTCCGCCTAGAGTTTGTGTCCAACCAAGAATTCACTGAAAGTGAATTCATGAAGTGGAAAGAAGCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CCA 72 bp | TCTTTCCACTTCATGAATTCACTTTCAGTGAATTCTTaGTTGGACACAAACTCTAGGCGGAACACTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SFHFMNSLSVNS*LDTNSRRNTRW Trigger: CCAGCGAGTGTTCCGCCTAGAGTTTGTGTCCAACCAAGAATTCACTGAAAGTGAATTCATGAAGTGGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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| CDS CAA 72 bp | TTCCACTTCATGAATTCACTTTCAGTGAATTCTTGGTaGGACACAAACTCTAGGCGGAACACTCGCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: FHFMNSLSVNSW*DTNSRRNTRWS Trigger: TGACCAGCGAGTGTTCCGCCTAGAGTTTGTGTCCAACCAAGAATTCACTGAAAGTGAATTCATGAAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028767.9 |
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