Pregenerated sensors for RTCB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001783Ensembl transcript IDs: ENSMUST00000001834.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCATCAGAGACACATCTCCTGGAAGGCTATTTTCCAACCCTGTaGCAGCAGCCTCTCCACCAGCCATGGTGGCACGCACAGCAACAG | + |
|
Preference number: 1 (lower is better) Translates to: LPSETHLLEGYFPTL*QQPLHQPWWHAQQQ Trigger: CTGTTGCTGTGCGTGCCACCATGGCTGGTGGAGAGGCTGCTGTCACAGGGTTGGAAAATAGCCTTCCAGGAGATGTGTCTCTGATGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR CCA 90 bp | GAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGACACATCTCCTaGAAGGCTATTTTCCAACCCTGTGACAGCAGCCTCTCCACCAGC | + |
|
Preference number: 1 (lower is better) Translates to: EEEAHLPCSHQRHIS*KAIFQPCDSSLSTS Trigger: GCTGGTGGAGAGGCTGCTGTCACAGGGTTGGAAAATAGCCTTCCAGGAGATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR GCA 90 bp | GTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTaGTCCCATCAGAGACACATCTCCTGGAAGGCTATTTTCCAACCC | + |
|
Preference number: 1 (lower is better) Translates to: VTNPCGTKEEEAHLP*SHQRHISWKAIFQP Trigger: GGGTTGGAAAATAGCCTTCCAGGAGATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR CAA 90 bp | ACCAGCCATGGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTaGTCAGGCCTTGAGTCTCATGTCTTAGGAATTTCAGTCCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: TSHGGTHSNSSAIRI*SGLESHVLGISVHG Trigger: CCCATGGACTGAAATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACCATGGCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCCATGATACCTTCTGGGCTACAAACAGGGCCTGGGATAAAGAAGCCCACTTATTTTCCAACCCTGTaGCAGCAGCCTCTCCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: FSMIPSGLQTGPGIKKPTYFPTL*QQPLHQ Trigger: CTGGTGGAGAGGCTGCTGTCACAGGGTTGGAAAATA...AGTGGGCTTCTTTATCCCAGGCCCTGTTTGTAGCCCAGAAGGTATCATGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCATGATACCTTCTGGGCTACAAACAGGGCCTGGGATAAAGAAGCCCACTGAGGCTCATTTGCCCTaGTCCCATCAGAGACACATC | + |
|
Preference number: 2 (lower is better) Translates to: FSMIPSGLQTGPGIKKPTEAHLP*SHQRHI Trigger: GATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTC...AGTGGGCTTCTTTATCCCAGGCCCTGTTTGTAGCCCAGAAGGTATCATGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR CAA 90 bp | TTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTaGCCCTGCTCCCATCAGAGACACATCTCCTGGAAGGCTATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LTVTNPCGTKEEEAH*PCSHQRHISWKAIF Trigger: GAAAATAGCCTTCCAGGAGATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR CCA 72 bp | GCTCATTTGCCCTGCTCCCATCAGAGACACATCTCCTaGAAGGCTATTTTCCAACCCTGTGACAGCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AHLPCSHQRHIS*KAIFQPCDSSL Trigger: GAGGCTGCTGTCACAGGGTTGGAAAATAGCCTTCCAGGAGATGTGTCTCTGATGGGAGCAGGGCAAATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR TCA 72 bp | GATAAAGAAGCCCACTCTGGTGATTACAGACTTGTATaGCCAAACAGGGCATTTCTGGGCCCCTTCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: DKEAHSGDYRLV*PNRAFLGPFPH Trigger: GTGTGGGAAGGGGCCCAGAAATGCCCTGTTTGGTCATACAAGTCTGTAATCACCAGAGTGGGCTTCTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR CCA 72 bp | GTGATTACAGACTTGTATGACCAAACAGGGCATTTCTaGGCCCCTTCCCACACCCCAATTGACAGTCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VITDLYDQTGHF*APSHTPIDSHK Trigger: TTTGTGACTGTCAATTGGGGTGTGGGAAGGGGCCCAGAAATGCCCTGTTTGGTCATACAAGTCTGTAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | CACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCAGCAATGAGGGGGTGGTaGGGCGGGAAAGCACGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTPIDSHKPLWDKGRRGSAMRGW*GGKARV Trigger: CACCCGTGCTTTCCCGCCTCACCACCCCCTCATTGC...TGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCATGGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTTGTCAGGCTTCCCATCCACCACGTaGTGCTCCACTTTGGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: TSHGGTHSNSSAIRILSGFPSTT*CSTLAI Trigger: TATCGCCAAAGTGGAGCAGCACGTGGTGGATGGGAA...GCCTGACAAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACCATGGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATGATACCTTCTGGGCTACAAACAGGGCCTGGGATAAAGAAGCCCACTGCACGGCCCGCTCCATaGCAGGTTGTTCCAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSMIPSGLQTGPGIKKPTARPAP*QVVPKV Trigger: GACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGC...AGTGGGCTTCTTTATCCCAGGCCCTGTTTGTAGCCCAGAAGGTATCATGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCATGGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTTGTCAGGCGCCACATTGCCAATCTaGTTCATGGCTGGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSHGGTHSNSSAIRILSGATLPI*FMAGRK Trigger: CTTTCTGCCAGCCATGAAGCAGATTGGCAATGTGGC...GCCTGACAAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACCATGGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | AACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGAGCAGGGCTGCCACATTaGCAATCTGCTTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPCGTKEEEAHLPCSHQRAGLPH*QSASWL Trigger: CAGCCATGAAGCAGATTGGCAATGTGGCAGCCCTGC...TCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCACCAGCCATGGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTTCGTGCTGCTCCACTTTaGCGATATTGTGCGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: PLHQPWWHAQQQLCNSDLRAAPL*RYCATH Trigger: ATGTGTCGCACAATATCGCCAAAGTGGAGCAGCACG...AAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACCATGGCTGGTGGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | CCCACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTGTCCCTTATGGTCGATaGCCATCTTCTTGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTPQLTVTNPCGTKEEEAVPYGR*PSSWRH Trigger: ATGCCGCCAAGAAGATGGGCATCGACCATAAGGGAC...AGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | CACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCAGGTGGCCCAAGCCTCTaGTTCCACTGTGGATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HTPIDSHKPLWDKGRRGSGGPSL*FHCGSS Trigger: TGATGATCCACAGTGGAAGCAGAGGCTTGGGCCACC...TGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | CATGTCTTAGGAATTTCAGTCCATGGGCACCTCAGACGCTCTGATAGTCTTGGAGTGGATCCCTTCCTGTaGACCAGCAGCGTCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVLGISVHGHLRRSDSLGVDPFL*TSSVRS Trigger: GGAACGGACGCTGCTGGTGCACAGGAAGGGATCCAC...TCCAAGACTATCAGAGCGTCTGAGGTGCCCATGGACTGAAATTCCTAAGACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | CAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCTGCCAATCTGCTTCATaGCTGGCAGAAAGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSQTPVGQRKKRLICPAPCQSAS*LAESHQ Trigger: TTGGTGGCTTTCTGCCAGCCATGAAGCAGATTGGCA...GGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | ACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATGGCAAACCCATAGCCTaGATGGACATCAGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPQLTVTNPCGTKEEEAHGKPIA*MDIRKP Trigger: GGGCTTCCTGATGTCCATTCAGGCTATGGGTTTGCC...ATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | AACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGATGGAATGACACCTTTTaGTCCCACCCCAACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPCGTKEEEAHLPCSHQRWNDTF*SHPNRD Trigger: ATCCCTGTTGGGGTGGGATCAAAAGGTGTCATTCCA...TCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | TCCCACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTTATTGGGGTCGGCTTaGAGCATCCTTCCATACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHTPIDSHKPLWDKGRRGLLGSA*SILPYS Trigger: GGAGTATGGAAGGATGCTGCAAGCCGACCCCAATAA...GCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | TGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGACACATCCCATCCACCACGTGCTaGTCCACTTTGGCGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: CGTKEEEAHLPCSHQRHIPSTTC*STLAIL Trigger: CAATATCGCCAAAGTGGAGCAGCACGTGGTGGATGG...GATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | ACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAATCTGCTTCATGGCTaGCAGAAAGCCACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: TNPCGTKEEEAHLPCSHQNLLHG*QKATNT Trigger: GGTGTTGGTGGCTTTCTGCCAGCCATGAAGCAGATT...CTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | CCCACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCCTCTGCTTCCACTGTaGATCATCACACACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPQLTVTNPCGTKEEEAPLLPL*IITHTC Trigger: ACAGGTGTGTGTGATGATCCACAGTGGAAGCAGAGG...AGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | CAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCGCACAAAGCCCTTCTTaGTCCTCCAGCAGTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSQTPVGQRKKRLICPAPAQSPS*SSSSFY Trigger: ATAAAAACTGCTGGAGGATCAAGAAGGGCTTTGTGC...GGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGACACATAACACTCCTTCAACCTaGATGTTGGGCACAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWDKGRRGSFALLPSETHNTPST*MLGTKP Trigger: GGGCTTTGTGCCCAACATGCAGGTTGAAGGAGTGTT...ATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | TGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGACACATCTATTCCAGGCAGGGCTaGCACATTGCCAATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CGTKEEEAHLPCSHQRHIYSRQG*HIANLL Trigger: AAGCAGATTGGCAATGTGGCAGCCCTGCCTGGAATA...GATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCATGGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTTGTCAGGCTGGTCAAACATAGCTTaGGCAAGTTGTTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSHGGTHSNSSAIRILSGWSNIA*ASCSFT Trigger: TGTGAAGGAACAACTTGCCCAAGCTATGTTTGACCA...GCCTGACAAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACCATGGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | TGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGACACATCCACACCTGTCCCTTATaGTCGATGCCCATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGTKEEEAHLPCSHQRHIHTCPL*SMPIFL Trigger: CAAGAAGATGGGCATCGACCATAAGGGACAGGTGTG...GATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAATTTCAGTCGCGGGAAAGCACGGGTaGATCCCTTCCTGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SAIRILSGLESHVLGISVAGKHG*IPSCAP Trigger: TGGTGCACAGGAAGGGATCCACCCGTGCTTTCCCGC...GACTGAAATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | CACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATGGCATTCATTGGAATaGCACCTTTTGATCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HTPIDSHKPLWDKGRRGSWHSLE*HLLIPP Trigger: GGGTGGGATCAAAAGGTGTCATTCCAATGAATGCCA...TGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | AGCAACAGCTCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGACCATACTCCTCACAGTaGTCCTTGTCTTCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSAIRILSGLESHVLGPYSSQ*SLSSAQ Trigger: CTGGGCTGAAGACAAGGAGCACTGTGAGGAGTATGG...TCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | CACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCACAGCCATGTTCCCTATaGCAAACCCATAGCCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTPIDSHKPLWDKGRRGSQPCSL*QTHSLN Trigger: ATTCAGGCTATGGGTTTGCCATAGGGAACATGGCTG...TGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| 3UTR CAA 72 bp | GGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTaGTCAGGCCTTGAGTCTCATGTCTTAGGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGTHSNSSAIRI*SGLESHVLGIS Trigger: TGAAATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | TCCCACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTGGCGGCATACTCATTaGAAATCTCATCTACAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTPIDSHKPLWDKGRRGWRHTH*KSHLQP Trigger: AGGTTGTAGATGAGATTTTCAATGAGTATGCCGCCA...GCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCCATGATACCTTCTGGGCTACAAACAGGGCCTGGGATAAAGAAGCCCACTCGAGCACAAGCCAACTaGCGGTCATTGACTATAATC | + |
|
Preference number: 4 (lower is better) Translates to: FSMIPSGLQTGPGIKKPTRAQAN*RSLTII Trigger: GATTATAGTCAATGACCGGCAGTTGGCTTGTGCTCG...AGTGGGCTTCTTTATCCCAGGCCCTGTTTGTAGCCCAGAAGGTATCATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | CACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCACTTATAGGACTCTGGTaGCTCTTCCATAACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTPIDSHKPLWDKGRRGSLIGLW*LFHNQL Trigger: AAGCTGGTTATGGAAGAGGCACCAGAGTCCTATAAG...TGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | AGCAACAGCTCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAACCCCAACAGGGATGTaGTCAAACATAGCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSSAIRILSGLESHVLGTPTGM*SNIAWA Trigger: TGCCCAAGCTATGTTTGACCACATCCCTGTTGGGGT...TCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAATTTCAGTCTTGTCCCTCTGGGGATaGAATCCGAGCACAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAIRILSGLESHVLGISVLSLWG*NPSTSQ Trigger: TTGGCTTGTGCTCGGATTGCATCCCCAGAGGGACAA...GACTGAAATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATGATACCTTCTGGGCTACAAACAGGGCCTGGGATAAAGAAGCCCACTCGCTCTCATCTAAATTaGTTCTTAGCAAGCGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSMIPSGLQTGPGIKKPTRSHLN*FLASGH Trigger: GTGTCCGCTTGCTAAGAACCAATTTAGATGAGAGCG...AGTGGGCTTCTTTATCCCAGGCCCTGTTTGTAGCCCAGAAGGTATCATGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | AACAGCTCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAATTCCCTTTTCTTTGCCCTaGGTGAGACCTTATTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSAIRILSGLESHVLGIPFSLP*VRPYWG Trigger: ACCCCAATAAGGTCTCACCCAGGGCAAAGAAAAGGG...AATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | TCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAATTTCAGTCGCACTGGTTGTCCTGTaGGTTGATAATCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAIRILSGLESHVLGISVALVVL*VDNPQQ Trigger: TTGCTGTGGATTATCAACTCACAGGACAACCAGTGC...GACTGAAATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CCA 90 bp | ACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGTTGTCTAAGACATCTTaGAAATCTAAGTTACGACGT | + |
|
Preference number: 4 (lower is better) Translates to: TNPCGTKEEEAHLPCSHQLSKTS*KSKLRR Trigger: ACGTCGTAACTTAGATTTCCAAGATGTCTTAGACAA...CTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR TCA 90 bp | ACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTCCAGCAGTTTTTATTaGTCTTGTCCAAGAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPQLTVTNPCGTKEEEAHSSSFY*SCPRTV Trigger: TACAGTTCTTGGACAAGATCAATAAAAACTGCTGGA...ATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 90 bp | GATGAACTATTCCAGGCAGGGCTGCCACATTGCCAATCTGCTTCATaGCTGGCAGAAAGCCACCAACACCACCACCTCGACAGGCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DELFQAGLPHCQSAS*LAESHQHHHLDRRS Trigger: GGAACGCCTGTCGAGGTGGTGGTGTTGGTGGCTTTCTGCCAGCCATGAAGCAGATTGGCAATGTGGCAGCCCTGCCTGGAATAGTTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 90 bp | CCAACTGAGGAAGGCCCCTTTTCTTTGCCCTGGGTGAGACCTTATTaGGGTCGGCTTGCAGCATCCTTCCATACTCCTCACAGTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTEEGPFSLPWVRPY*GRLAASFHTPHSAP Trigger: AGGAGCACTGTGAGGAGTATGGAAGGATGCTGCAAGCCGACCCCAATAAGGTCTCACCCAGGGCAAAGAAAAGGGGCCTTCCTCAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 90 bp | CCAGCAGCGTCCGTTCCTTCCCATCCACCACGTGCTGCTCCACTTTaGCGATATTGTGCGACACATCATAGATCACATGCAGGTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PAASVPSHPPRAAPL*RYCATHHRSHAGPG Trigger: ACCTGGACCTGCATGTGATCTATGATGTGTCGCACAATATCGCCAAAGTGGAGCAGCACGTGGTGGATGGGAAGGAACGGACGCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS GCA 90 bp | AAGCACGGCCCGCTCCATGACAGGTTGTTCCAAAGGTCTCAGTCATaGCTTGTTCAGTGCCAGTCAGAACGTAACTACAGGTCCCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: KHGPLHDRLFQRSQS*LVQCQSERNYRSPW Trigger: CCATGGGGACCTGTAGTTACGTTCTGACTGGCACTGAACAAGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | ACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGCCTTCAACCTGCATGTaGGGCACAAAGCCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNPCGTKEEEAHLPCSHQPSTCM*GTKPFL Trigger: CAAGAAGGGCTTTGTGCCCAACATGCAGGTTGAAGG...CTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCACCAGCCATGGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTTGCCTCCTCCAAGTCTTaGGCATTCATTGGAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLHQPWWHAQQQLCNSDLASSKS*AFIGMT Trigger: TGTCATTCCAATGAATGCCAAAGACTTGGAGGAGGC...AAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACCATGGCTGGTGGAGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | CCCACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCTTATTGGGGTCGGCTaGCAGCATCCTTCCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: PTPQLTVTNPCGTKEEEALIGVG*QHPSIL Trigger: GAGTATGGAAGGATGCTGCAAGCCGACCCCAATAAG...AGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGACACATTGCATCTGTAGCTACTaGGTGGCCCAAGCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWDKGRRGSFALLPSETHCICSY*VAQASA Trigger: AGCAGAGGCTTGGGCCACCAAGTAGCTACAGATGCA...ATGTGTCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | GTGATTACAGACTTGTATGACCAAACAGGGCATTTCTGGGCCCCTTCCCACACCGGGAAGCAACCCGGATaGCAATTCCCATGTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VITDLYDQTGHFWAPSHTGKQPG*QFPCLP Trigger: TGGCAGACATGGGAATTGCAATCCGGGTTGCTTCCC...GGTGTGGGAAGGGGCCCAGAAATGCCCTGTTTGGTCATACAAGTCTGTAATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | CAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCGTGGTCAAACATAGCTaGGGCAAGTTGTTCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSQTPVGQRKKRLICPAPVVKHS*GKLFLH Trigger: GTGAAGGAACAACTTGCCCAAGCTATGTTTGACCAC...GGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | CACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCAGGTCTCAGTCATGCCTaGTTCAGTGCCAGTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HTPIDSHKPLWDKGRRGSGLSHA*FSASQN Trigger: GTTCTGACTGGCACTGAACAAGGCATGACTGAGACC...TGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 90 bp | AAGTTACGACGTGATTTTGCTCTGGACAAAGCACGGCCCGCTCCATaGCAGGTTGTTCCAAAGGTCTCAGTCATGCCTTGTTCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLRRDFALDKARPAP*QVVPKVSVMPCSVP Trigger: TGGCACTGAACAAGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGCTTTGTCCAGAGCAAAATCACGTCGTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGAGTCTCATGTCTTAGGAATTTCAGTCCATGGGCACCTCAGACGCTCTCATAGCTTGGGCAAGTaGTTCCTTCACAGGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLESHVLGISVHGHLRRSHSLGK*FLHRLY Trigger: GTACAGCCTGTGAAGGAACAACTTGCCCAAGCTATG...AGAGCGTCTGAGGTGCCCATGGACTGAAATTCCTAAGACATGAGACTCAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | GTGATTACAGACTTGTATGACCAAACAGGGCATTTCTGGGCCCCTTCCCACACCGGCACAAAGCCCTTCTaGATCCTCCAGCAGTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VITDLYDQTGHFWAPSHTGTKPF*ILQQFL Trigger: TAAAAACTGCTGGAGGATCAAGAAGGGCTTTGTGCC...GGTGTGGGAAGGGGCCCAGAAATGCCCTGTTTGGTCATACAAGTCTGTAATCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | CCCACACCCCAATTGACAGTCACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTTCGCTCTCATCTAAATaGGTTCTTAGCAAGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PTPQLTVTNPCGTKEEEASLSSK*VLSKRT Trigger: TGTCCGCTTGCTAAGAACCAATTTAGATGAGAGCGA...AGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGTGACTGTCAATTGGGGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGAGTCTCATGTCTTAGGAATTTCAGTCCATGGGCACCTCAGACGCTCTTCGATGCCCATCTTCTaGGCGGCATACTCATTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLESHVLGISVHGHLRRSSMPIF*AAYSLK Trigger: TTTCAATGAGTATGCCGCCAAGAAGATGGGCATCGA...AGAGCGTCTGAGGTGCCCATGGACTGAAATTCCTAAGACATGAGACTCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | CATGTCTTAGGAATTTCAGTCCATGGGCACCTCAGACGCTCTGATAGTCTTGGAACGTGCTGCTCCACTTaGGCGATATTGTGCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: HVLGISVHGHLRRSDSLGTCCST*AILCDT Trigger: TGTGTCGCACAATATCGCCAAAGTGGAGCAGCACGT...TCCAAGACTATCAGAGCGTCTGAGGTGCCCATGGACTGAAATTCCTAAGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | AACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGAGATGGTTGTCCTGTGAGTaGATAATCCACAGCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: NPCGTKEEEAHLPCSHQRWLSCE*IIHSNE Trigger: CTCATTGCTGTGGATTATCAACTCACAGGACAACCA...TCTCTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 90 bp | CAATGCCTCCTCCAAGTCTTTGGCATTCATTGGAATGACACCTTTTaGTCCCACCCCAACAGGGATGTGGTCAAACATAGCTTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QCLLQVFGIHWNDTF*SHPNRDVVKHSLGK Trigger: CTTGCCCAAGCTATGTTTGACCACATCCCTGTTGGGGTGGGATCAAAAGGTGTCATTCCAATGAATGCCAAAGACTTGGAGGAGGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | ACCAGCCATGGTGGCACGCACAGCAACAGCTCTGCAATTCGGATCTTGTCAGGCCAGTTTTTATTGATCTaGTCCAAGAACTGTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSHGGTHSNSSAIRILSGQFLLI*SKNCSS Trigger: TGAGCTACAGTTCTTGGACAAGATCAATAAAAACTG...GCCTGACAAGATCCGAATTGCAGAGCTGTTGCTGTGCGTGCCACCATGGCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | TTCTGGGCTACAAACAGGGCCTGGGATAAAGAAGCCCACTCTGGTGATTACAGAGCCAACTGCCGGTCATaGACTATAATCTTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FWATNRAWDKEAHSGDYRANCRS*TIILSL Trigger: GAGAGACAAGATTATAGTCAATGACCGGCAGTTGGC...TCTGTAATCACCAGAGTGGGCTTCTTTATCCCAGGCCCTGTTTGTAGCCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 90 bp | ATTCATATCAAAGGCAGCCATGTTCCCTATGGCAAACCCATAGCCTaGATGGACATCAGGAAGCCCGATAGACCGATGAACTATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IHIKGSHVPYGKPIA*MDIRKPDRPMNYSR Trigger: CCTGGAATAGTTCATCGGTCTATCGGGCTTCCTGATGTCCATTCAGGCTATGGGTTTGCCATAGGGAACATGGCTGCCTTTGATATGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 90 bp | ACACCTTTTGATCCCACCCCAACAGGGATGTGGTCAAACATAGCTTaGGCAAGTTGTTCCTTCACAGGCTGTACATCGCTCTCATCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPFDPTPTGMWSNIA*ASCSFTGCTSLSSK Trigger: TTTAGATGAGAGCGATGTACAGCCTGTGAAGGAACAACTTGCCCAAGCTATGTTTGACCACATCCCTGTTGGGGTGGGATCAAAAGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | ACAAACCCCTGTGGGACAAAGGAAGAAGAGGCTCATTTGCCCTGCTCCCATCAGCTCCAGCAGTTTTTATaGATCTTGTCCAAGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TNPCGTKEEEAHLPCSHQLQQFL*ILSKNC Trigger: ACAGTTCTTGGACAAGATCAATAAAAACTGCTGGAG...CTGATGGGAGCAGGGCAAATGAGCCTCTTCTTCCTTTGTCCCACAGGGGTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | AACAGCTCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAATTGAAGGCCCCTTTTCTTaGCCCTGGGTGAGACCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: NSSAIRILSGLESHVLGIEGPFS*PWVRPY Trigger: ATAAGGTCTCACCCAGGGCAAAGAAAAGGGGCCTTC...AATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | AACAGCTCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAATTTCTTCCATAACCAGCTaGGGGGAAGCAACCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NSSAIRILSGLESHVLGISSITS*GEATRI Trigger: AATCCGGGTTGCTTCCCCCAAGCTGGTTATGGAAGA...AATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 90 bp | CCTGTCCCTTATGGTCGATGCCCATCTTCTTGGCGGCATACTCATTaGAAATCTCATCTACAACCTGGATTTCTGCATAATGGTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVPYGRCPSSWRHTH*KSHLQPGFLHNGCL Trigger: CAGGCAACCATTATGCAGAAATCCAGGTTGTAGATGAGATTTTCAATGAGTATGCCGCCAAGAAGATGGGCATCGACCATAAGGGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS-3UTR CAA 90 bp | AACAGCTCTGCAATTCGGATCTTGTCAGGCCTTGAGTCTCATGTCTTAGGAATTTCATTGACTATAATCTaGTCTCTCTTCATGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NSSAIRILSGLESHVLGISLTII*SLFMAF Trigger: AAAGGCCATGAAGAGAGACAAGATTATAGTCAATGA...AATTCCTAAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 72 bp | AGGCAGGGCTGCCACATTGCCAATCTGCTTCATGGCTaGCAGAAAGCCACCAACACCACCACCTCGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RQGCHIANLLHG*QKATNTTTSTG Trigger: GCCTGTCGAGGTGGTGGTGTTGGTGGCTTTCTGCCAGCCATGAAGCAGATTGGCAATGTGGCAGCCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS GCA 72 bp | TGCACCAGCAGCGTCCGTTCCTTCCCATCCACCACGTaGTGCTCCACTTTGGCGATATTGTGCGACACATCA | + |
|
Preference number: 6 (lower is better) Translates to: CTSSVRSFPSTT*CSTLAILCDTS Trigger: TGATGTGTCGCACAATATCGCCAAAGTGGAGCAGCACGTGGTGGATGGGAAGGAACGGACGCTGCTGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 90 bp | ACGGCCCGCTCCATGACAGGTTGTTCCAAAGGTCTCAGTCATGCCTaGTTCAGTGCCAGTCAGAACGTAACTACAGGTCCCCATGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TARSMTGCSKGLSHA*FSASQNVTTGPHGA Trigger: GGCACCATGGGGACCTGTAGTTACGTTCTGACTGGCACTGAACAAGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 72 bp | GAAGGCCCCTTTTCTTTGCCCTGGGTGAGACCTTATTaGGGTCGGCTTGCAGCATCCTTCCATACTCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: EGPFSLPWVRPY*GRLAASFHTPH Trigger: GTGAGGAGTATGGAAGGATGCTGCAAGCCGACCCCAATAAGGTCTCACCCAGGGCAAAGAAAAGGGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS GCA 72 bp | TTCTTTGCCCTGGGTGAGACCTTATTGGGGTCGGCTTaGAGCATCCTTCCATACTCCTCACAGTGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FFALGETLLGSA*SILPYSSQCSL Trigger: CAAGGAGCACTGTGAGGAGTATGGAAGGATGCTGCAAGCCGACCCCAATAAGGTCTCACCCAGGGCAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 72 bp | CGTGATTTTGCTCTGGACAAAGCACGGCCCGCTCCATaGCAGGTTGTTCCAAAGGTCTCAGTCATGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RDFALDKARPAP*QVVPKVSVMPC Trigger: ACAAGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGCTTTGTCCAGAGCAAAATCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 72 bp | GATCCCACCCCAACAGGGATGTGGTCAAACATAGCTTaGGCAAGTTGTTCCTTCACAGGCTGTACATCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DPTPTGMWSNIA*ASCSFTGCTSL Trigger: GAGCGATGTACAGCCTGTGAAGGAACAACTTGCCCAAGCTATGTTTGACCACATCCCTGTTGGGGTGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 90 bp | GACGTGATTTTGCTCTGGACAAAGCACGGCCCGCTCCATGACAGGTaGTTCCAAAGGTCTCAGTCATGCCTTGTTCAGTGCCAGTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: DVILLWTKHGPLHDR*FQRSQSCLVQCQSE Trigger: TTCTGACTGGCACTGAACAAGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGCTTTGTCCAGAGCAAAATCACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 72 bp | AAAGGCAGCCATGTTCCCTATGGCAAACCCATAGCCTaGATGGACATCAGGAAGCCCGATAGACCGATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KGSHVPYGKPIA*MDIRKPDRPMN Trigger: GTTCATCGGTCTATCGGGCTTCCTGATGTCCATTCAGGCTATGGGTTTGCCATAGGGAACATGGCTGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS GCA 72 bp | AGGTTGTTCCAAAGGTCTCAGTCATGCCTTGTTCAGTaGCAGTCAGAACGTAACTACAGGTCCCCATGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLFQRSQSCLVQ*QSERNYRSPWC Trigger: GCACCATGGGGACCTGTAGTTACGTTCTGACTGGCACTGAACAAGGCATGACTGAGACCTTTGGAACAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 72 bp | TCCGTTCCTTCCCATCCACCACGTGCTGCTCCACTTTaGCGATATTGTGCGACACATCATAGATCACATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVPSHPPRAAPL*RYCATHHRSHA Trigger: TGCATGTGATCTATGATGTGTCGCACAATATCGCCAAAGTGGAGCAGCACGTGGTGGATGGGAAGGAACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 90 bp | TGTCCCTCTGGGGATGCAATCCGAGCACAAGCCAACTGCCGGTCATaGACTATAATCTTGTCTCTCTTCATGGCCTTTTCCATAGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: CPSGDAIRAQANCRS*TIILSLFMAFSIAT Trigger: GGTAGCTATGGAAAAGGCCATGAAGAGAGACAAGATTATAGTCAATGACCGGCAGTTGGCTTGTGCTCGGATTGCATCCCCAGAGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 72 bp | CCAATGCCTCCTCCAAGTCTTTGGCATTCATTGGAATaGCACCTTTTGATCCCACCCCAACAGGGATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PMPPPSLWHSLE*HLLIPPQQGCG Trigger: ACCACATCCCTGTTGGGGTGGGATCAAAAGGTGTCATTCCAATGAATGCCAAAGACTTGGAGGAGGCATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS GCA 72 bp | TGTCCCTCTGGGGATGCAATCCGAGCACAAGCCAACTaGCGGTCATTGACTATAATCTTGTCTCTCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: CPSGDAIRAQAN*RSLTIILSLFM Trigger: CATGAAGAGAGACAAGATTATAGTCAATGACCGGCAGTTGGCTTGTGCTCGGATTGCATCCCCAGAGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 72 bp | CAGGGTCATTCATATCAAAGGCAGCCATGTTCCCTATaGCAAACCCATAGCCTGAATGGACATCAGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QGHSYQRQPCSL*QTHSLNGHQEA Trigger: GGCTTCCTGATGTCCATTCAGGCTATGGGTTTGCCATAGGGAACATGGCTGCCTTTGATATGAATGACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 72 bp | GGGGATGCAATCCGAGCACAAGCCAACTGCCGGTCATaGACTATAATCTTGTCTCTCTTCATGGCCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GDAIRAQANCRS*TIILSLFMAFS Trigger: GGAAAAGGCCATGAAGAGAGACAAGATTATAGTCAATGACCGGCAGTTGGCTTGTGCTCGGATTGCATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 72 bp | GTAACTACAGGTCCCCATGGTGCCACCAATAAGCACTaGTTGTCCTGTGAGTTGATAATCCACAGCAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTTGPHGATNKH*LSCELIIHSNE Trigger: CTCATTGCTGTGGATTATCAACTCACAGGACAACCAGTGCTTATTGGTGGCACCATGGGGACCTGTAGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CCA 72 bp | CATCTTGGAAATCTAAGTTACGACGTGATTTTGCTCTaGACAAAGCACGGCCCGCTCCATGACAGGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HLGNLSYDVILL*TKHGPLHDRLF Trigger: GAACAACCTGTCATGGAGCGGGCCGTGCTTTGTCCAGAGCAAAATCACGTCGTAACTTAGATTTCCAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 72 bp | CTAAGACATCTTGGAAATCTAAGTTACGACGTGATTTaGCTCTGGACAAAGCACGGCCCGCTCCATGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRHLGNLSYDVI*LWTKHGPLHDR Trigger: CCTGTCATGGAGCGGGCCGTGCTTTGTCCAGAGCAAAATCACGTCGTAACTTAGATTTCCAAGATGTCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 90 bp | GATGCAATCCGAGCACAAGCCAACTGCCGGTCATTGACTATAATCTaGTCTCTCTTCATGGCCTTTTCCATAGCTACCAGTGCATCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: DAIRAQANCRSLTII*SLFMAFSIATSASV Trigger: TACAGATGCACTGGTAGCTATGGAAAAGGCCATGAAGAGAGACAAGATTATAGTCAATGACCGGCAGTTGGCTTGTGCTCGGATTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 90 bp | CCAGTTTGTCTAAGACATCTTGGAAATCTAAGTTACGACGTGATTTaGCTCTGGACAAAGCACGGCCCGCTCCATGACAGGTTGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PVCLRHLGNLSYDVI*LWTKHGPLHDRLFQ Trigger: TTGGAACAACCTGTCATGGAGCGGGCCGTGCTTTGTCCAGAGCAAAATCACGTCGTAACTTAGATTTCCAAGATGTCTTAGACAAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS TCA 72 bp | CTCCAAGTCTTTGGCATTCATTGGAATGACACCTTTTaGTCCCACCCCAACAGGGATGTGGTCAAACATAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQVFGIHWNDTF*SHPNRDVVKHS Trigger: GCTATGTTTGACCACATCCCTGTTGGGGTGGGATCAAAAGGTGTCATTCCAATGAATGCCAAAGACTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 72 bp | ACACACACCTGTCCCTTATGGTCGATGCCCATCTTCTaGGCGGCATACTCATTGAAAATCTCATCTACAACC | + |
|
Preference number: 6 (lower is better) Translates to: THTCPLWSMPIF*AAYSLKISSTT Trigger: GGTTGTAGATGAGATTTTCAATGAGTATGCCGCCAAGAAGATGGGCATCGACCATAAGGGACAGGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 72 bp | CGAGCACAAGCCAACTGCCGGTCATTGACTATAATCTaGTCTCTCTTCATGGCCTTTTCCATAGCTACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RAQANCRSLTII*SLFMAFSIATS Trigger: ACTGGTAGCTATGGAAAAGGCCATGAAGAGAGACAAGATTATAGTCAATGACCGGCAGTTGGCTTGTGCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 90 bp | TGGATCATCACACACACCTGTCCCTTATGGTCGATGCCCATCTTCTaGGCGGCATACTCATTGAAAATCTCATCTACAACCTGGATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WIITHTCPLWSMPIF*AAYSLKISSTTWIS Trigger: AGAAATCCAGGTTGTAGATGAGATTTTCAATGAGTATGCCGCCAAGAAGATGGGCATCGACCATAAGGGACAGGTGTGTGTGATGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 72 bp | ACTCCTTCAACCTGCATGTTGGGCACAAAGCCCTTCTaGATCCTCCAGCAGTTTTTATTGATCTTGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TPSTCMLGTKPF*ILQQFLLILSK Trigger: CTTGGACAAGATCAATAAAAACTGCTGGAGGATCAAGAAGGGCTTTGTGCCCAACATGCAGGTTGAAGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 90 bp | TGGGCAAGTTGTTCCTTCACAGGCTGTACATCGCTCTCATCTAAATaGGTTCTTAGCAAGCGGACACCACAGTTAATATCAAATCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: WASCSFTGCTSLSSK*VLSKRTPQLISNPT Trigger: TGTCGGATTTGATATTAACTGTGGTGTCCGCTTGCTAAGAACCAATTTAGATGAGAGCGATGTACAGCCTGTGAAGGAACAACTTGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||
| CDS CAA 72 bp | TGTTCCTTCACAGGCTGTACATCGCTCTCATCTAAATaGGTTCTTAGCAAGCGGACACCACAGTTAATATCA | + |
|
Preference number: 6 (lower is better) Translates to: CSFTGCTSLSSK*VLSKRTPQLIS Trigger: TGATATTAACTGTGGTGTCCGCTTGCTAAGAACCAATTTAGATGAGAGCGATGTACAGCCTGTGAAGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001834.4 |
||