Pregenerated sensors for RSRC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029422Ensembl transcript IDs: ENSMUST00000050827.14, ENSMUST00000057795.12, ENSMUST00000111515.8, ENSMUST00000182015.8, ENSMUST00000182093.8, ENSMUST00000182241.2, ENSMUST00000182411.8, ENSMUST00000182556.8, ENSMUST00000182584.8, ENSMUST00000182861.8, ENSMUST00000182955.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCATTGCAGGTCGGAACCAAGTCCATTCACTAAGGTGAATGGATaGAGAAGGGGTGAGCTCACACCTTTGCTGCTGTTCAGTGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: GHCRSEPSPFTKVNG*RRGELTPLLLFSGV Trigger: AACTCCACTGAACAGCAGCAAAGGTGTGAGCTCACCCCTTCTTCATCCATTCACCTTAGTGAATGGACTTGGTTCCGACCTGCAATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR TCA 90 bp | GCTTGTAGGGCCATTGCAGGTCGGAACCAAGTCCATTCACTAAGGTaGATGGATGAAGAAGGGGTGAGCTCACACCTTTGCTGCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: ACRAIAGRNQVHSLR*MDEEGVSSHLCCCS Trigger: TGAACAGCAGCAAAGGTGTGAGCTCACCCCTTCTTCATCCATTCACCTTAGTGAATGGACTTGGTTCCGACCTGCAATGGCCCTACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR TCA 90 bp | CTGCTTCTACTGCGATGGCGCCTTTCACGCGATCTAGACCTTGAGTaGCTTCTGCCCCGTGATGACTTCCTTTCTTTGCGTTTATGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LLLLRWRLSRDLDLE*LLPRDDFLSLRLCL Trigger: CAGACATAAACGCAAAGAAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGTCTAGATCGCGTGAAAGGCGCCATCGCAGTAGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000182015.8 ENSMUST00000182093.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR CCA 90 bp | CCTCTTTTTCTCTTGCTCAGCAAACTTCATTGGATTCACAGCTGCTaGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTGCCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: PLFLLLSKLHWIHSC*VVVAGHCYASLCQG Trigger: GCCTTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCAATGAAGTTTGCTGAGCAAGAGAAAAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR GCA 90 bp | ATTTCTTTGCCCTTTCTAATCTTTGCTGCTGTTCAGTGGAGTTTCTaGCAGGCTGGCTTCACAGGGCAGCAGCACATCAGGTTACACTGT | + |
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Preference number: 1 (lower is better) Translates to: ISLPFLIFAAVQWSF*QAGFTGQQHIRLHC Trigger: ACAGTGTAACCTGATGTGCTGCTGCCCTGTGAAGCCAGCCTGGCAGAAACTCCACTGAACAGCAGCAAAGATTAGAAAGGGCAAAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182584.8 |
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| 3UTR TCA 90 bp | TCTTGGTTTTTCAATTCTCTTCTTTCTATCTCGACTTCGACTCCTTaGTCTGCTCCTGCTTCTAGTCCTATGCCTGTGTCTGGATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SWFFNSLLSISTSTP*SAPASSPMPVSGSG Trigger: TCCAGATCCAGACACAGGCATAGGACTAGAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAGAAAGAAGAGAATTGAAAAACCAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR TCA 90 bp | ATGCTGGCCTTAAATTACAGGGCTATTCACTCAAAGAAATACTTGTaGCAGAGACAGTCTGACAGAGGGGTTATAGGTGTCTGCAACAAT | + |
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Preference number: 1 (lower is better) Translates to: MLALNYRAIHSKKYL*QRQSDRGVIGVCNN Trigger: ATTGTTGCAGACACCTATAACCCCTCTGTCAGACTGTCTCTGTCACAAGTATTTCTTTGAGTGAATAGCCCTGTAATTTAAGGCCAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR GCA 90 bp | TGCACACCAATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATaGTCCACTCACCCTCCCTTTACAGCTCGCTGTGGTATTGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: CTPIVPYSRNSTILI*STHPPFTARCGIVY Trigger: ATAGACAATACCACAGCGAGCTGTAAAGGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAATTGGTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| 3UTR GCA 90 bp | TTGGTGAAACCCTGTCTAGAAAAATCAAAACAGACAGGTGGAATATaGCTTTACCTCAGAAGTTGGGAGACACAGGATGATCTTAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LVKPCLEKSKQTGGI*LYLRSWETQDDLSE Trigger: CTCACTAAGATCATCCTGTGTCTCCCAACTTCTGAGGTAAAGGCATATTCCACCTGTCTGTTTTGATTTTTCTAGACAGGGTTTCACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR TCA 90 bp | AGGCAAGCGCCACTATTCAGGAACACCAAATCGGTTTTGAGAACATaGAAGCATGCAAAATATTTATGTAGTACCTTAGTAACAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RQAPLFRNTKSVLRT*KHAKYLCSTLVTSS Trigger: GCTGCTTGTTACTAAGGTACTACATAAATATTTTGCATGCTTTCATGTTCTCAAAACCGATTTGGTGTTCCTGAATAGTGGCGCTTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR-3UTR GCA 90 bp | GATTCACAGCTGCTGGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTGCCAGTTCAGTGGAGTTTCTaGCAGGCTGGCTTCACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DSQLLGCSSWALLCQSLPVQWSF*QAGFTG Trigger: CCCTGTGAAGCCAGCCTGGCAGAAACTCCACTGAAC...TGGCAGAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182584.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGCTTCTAGTCCTATGCCTGTGTCTGGATCTGGATCGGGAACGAGTTCTGTTTCCCTGCTTCTACTaGGATGGCGCCTTTCACGCG | + |
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Preference number: 2 (lower is better) Translates to: LLLLVLCLCLDLDRERVLFPCFY*DGAFHA Trigger: CGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAA...CAGAACTCGTTCCCGATCCAGATCCAGACACAGGCATAGGACTAGAAGCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | GATTCACAGCTGCTGGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTGCCAACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: DSQLLGCSSWALLCQSLPTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...TGGCAGAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTGCCAAGGCTTTAGCTGGATTCACAGCTGCTaGGTTGTAGTAGCTGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CWVVVAGHCYASLCQGFSWIHSC*VVVAGH Trigger: GTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCA...GCTAAAGCCTTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTGCCAAGGCTTTAGCTTGCAGACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: VVVAGHCYASLCQGFSLQTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...CTGCAAGCTAAAGCCTTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTGCCAAGGCTTTAGCAGTGGCTGCAGCTGCTaGAGCCATTTCTTGTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CWVVVAGHCYASLCQGFSSGCSC*SHFLLF Trigger: AAACAACAAGAAATGGCTGCAGCAGCTGCAGCCACT...GCTAAAGCCTTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAACTGGCCCCAAGACAGGGTTTCTCTGTGTAGCTTTGGTTGTCCTGGCACTGGGACTGAAGGCATaGACTAACACTTCACACATT | + |
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Preference number: 2 (lower is better) Translates to: PPTGPKTGFLCVALVVLALGLKA*TNTSHI Trigger: AATGTGTGAAGTGTTAGTCCATGCCTTCAGTCCCAG...TGCCAGGACAACCAAAGCTACACAGAGAAACCCTGTCTTGGGGCCAGTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR-3UTR TCA 90 bp | CATTGGATTCACAGCTGCTGGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCATACTAGCTGTGTGGTaGACAAGGACCCAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: HWIHSCWVVVAGHCYASLILAVW*TRTQHQ Trigger: CTGATGTTGGGTCCTTGTTCACCACACAGCTAGTAT...GAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR TCA 90 bp | CTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTATACTAGCTGTGTGGTaGACAAGGACCCAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: LLLDRDFFLSLLLLRWRLILAVW*TRTQHQ Trigger: CTGATGTTGGGTCCTTGTTCACCACACAGCTAGTAT...AAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCTCGACTTCGACTCCTTGATCTGCTCCTGCTTCTAGTCCTATGCCTGTGTACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: LSRLRLLDLLLLLVLCLCTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...ACACAGGCATAGGACTAGAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGATCTGGATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: SGSGSGTSSDPSFPIPASTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...AGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAGATCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAACTGGCCCCAAGACAGGGTTTCTCTGTGTAGCTTTGGTTGTCCTGGCATCAGCAGATAGCCCCTaGTATCTTAGAATTCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: PPTGPKTGFLCVALVVLASADSP*YLRILY Trigger: ATAGAGAATTCTAAGATATCAGGGGCTATCTGCTGA...TGCCAGGACAACCAAAGCTACACAGAGAAACCCTGTCTTGGGGCCAGTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGACACAGGATGATCTTAGTGAGTTCAAGGCCACTCTGGTTACAGAACAAGTTCAGTGGAGTTTCTaGCAGGCTGGCTTCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: WETQDDLSEFKATLVTEQVQWSF*QAGFTG Trigger: CCCTGTGAAGCCAGCCTGGCAGAAACTCCACTGAAC...TTGTTCTGTAACCAGAGTGGCCTTGAACTCACTAAGATCATCCTGTGTCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATGTAGTAGCTGGGCACTaGTATGCCAGTCTCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: PDFSRLRFVAFFLALPEHVVAGH*YASLCQ Trigger: TTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTAC...ATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTGCCAAGGCTTTAGCTTGCAGTCCTGTCTCTGCTTCTaGATCGAGACTTTTTCCGAT | + |
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Preference number: 2 (lower is better) Translates to: VVVAGHCYASLCQGFSLQSCLCF*IETFSD Trigger: ATCGGAAAAAGTCTCGATCCAGAAGCAGAGACAGGA...CTGCAAGCTAAAGCCTTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTATTATTTTGCTATCTaGGTCTGCAGCGTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PTPRSRLLPFPASTAMAPYYFAI*VCSVFS Trigger: ACTGAAGACGCTGCAGACTCAGATAGCAAAATAATA...AGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | GGATCTGGATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTAGAACCTTGAGTGACTTCTaGCCCGTGATGACTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GSGSGTSSDPSFPIPASRTLSDF*PVMTSF Trigger: AAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGT...TCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGATCTGGATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTACCTTGAGTGACTTCTaGCCCGTGATGACTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SGSGSGTSSDPSFPIPASTLSDF*PVMTSF Trigger: AAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGT...AGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAGATCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATTGCTATGCCAGTCTCTaGCAAGGCTTTAGCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PDFSRLRFVAFFLALPEHCYASL*QGFSLQ Trigger: CTGCAAGCTAAAGCCTTGGCAGAGACTGGCATAGCA...ATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATCTAGCTAGTGCTTCTTaGGCGTCCATTGCTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PDFSRLRFVAFFLALPEHLASAS*ASIAVF Trigger: AAACACAGCAATGGACGCTCAAGAAGCACTAGCTAG...ATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | AGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATTTTCCAGTGGCTGCAGCTaGTGCAGCCATTTCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: RFQQTEICRLLSCLARAFSSGCS*CSHFLL Trigger: CAACAAGAAATGGCTGCAGCAGCTGCAGCCACTGGA...AAATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATTGTCGCCTTCTTTCTTaGCTTGCCAGAGCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PDFSRLRFVAFFLALPEHCRLLS*LARAFS Trigger: GGAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACA...ATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTATACTAGCTGTGTGGTaGACAAGGACCCAACATCAG | + |
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Preference number: 2 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFILAVW*TRTQHQ Trigger: CTGATGTTGGGTCCTTGTTCACCACACAGCTAGTAT...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| 3UTR-3UTR TCA 90 bp | GGATCTGGATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTAGATATTATTTTGCTATCTaGGTCTGCAGCGTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GSGSGTSSDPSFPIPASRYYFAI*VCSVFS Trigger: ACTGAAGACGCTGCAGACTCAGATAGCAAAATAATA...TCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | AGACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTTGTTCTTTGTCATTGTaGTCCTCAGACTTGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: RLFPIPTPRSRLLPFPASCSLSL*SSDLCL Trigger: GAGACACAAGTCTGAGGAGCACAATGACAAAGAACA...AGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | AGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATTTACCTTGAGTGACTTCTaGCCCGTGATGACTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: RFQQTEICRLLSCLARAFTLSDF*PVMTSF Trigger: AAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGT...AAATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGACACAGGATGATCTTAGTGAGTTCAAGGCCACTCTGGTTACAGAACAACTATGTAGCCCAGGCTaGATACAAGATGTACTCAAG | + |
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Preference number: 2 (lower is better) Translates to: WETQDDLSEFKATLVTEQLCSPG*IQDVLK Trigger: CTTGAGTACATCTTGTATCCAGCCTGGGCTACATAG...TTGTTCTGTAACCAGAGTGGCCTTGAACTCACTAAGATCATCCTGTGTCTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTAGATCTTTATTATTTTGCTATCTaGGTCTGCAGCGTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LDRERVLILRFLSLLLDLYYFAI*VCSVFS Trigger: ACTGAAGACGCTGCAGACTCAGATAGCAAAATAATA...AAGATCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTGGACTAGGTGTCCGGCTTAGGCTTCTGCTAAATCTTCTTGGTTTTTCATATTATTTTGCTATCTaGGTCTGCAGCGTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GGGLGVRLRLLLNLLGFSYYFAI*VCSVFS Trigger: ACTGAAGACGCTGCAGACTCAGATAGCAAAATAATA...TGAAAAACCAAGAAGATTTAGCAGAAGCCTAAGCCGGACACCTAGTCCACCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTAGATCTTATGACTTCCTTTCTTTaGGTTTATGTCTGTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LDRERVLILRFLSLLLDLMTSFL*VYVCPH Trigger: GTGAGGACAGACATAAACGCAAAGAAAGGAAGTCAT...AAGATCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATATGACTTCCTTTCTTTaGGTTTATGTCTGTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: PDFSRLRFVAFFLALPEHMTSFL*VYVCPH Trigger: GTGAGGACAGACATAAACGCAAAGAAAGGAAGTCAT...ATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCATACTAGCTGTGTGGTaGACAAGGACCCAACATCAG | + |
|
Preference number: 2 (lower is better) Translates to: IVPYSRNSTILICSTHPPILAVW*TRTQHQ Trigger: CTGATGTTGGGTCCTTGTTCACCACACAGCTAGTAT...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| 3UTR-3UTR TCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATAATACTAGCTGTGTGGTaGACAAGGACCCAACATCAG | + |
|
Preference number: 2 (lower is better) Translates to: WKWVEPDYNTNTSITDLIILAVW*TRTQHQ Trigger: CTGATGTTGGGTCCTTGTTCACCACACAGCTAGTAT...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAACAGACAGGTGGAATATGCCTTTACCTCAGAAGTTGGGAGACACAGGATTCGCTCTTTGGCTCCTaGATATTTCAGTTATCGACT | + |
|
Preference number: 2 (lower is better) Translates to: SKQTGGICLYLRSWETQDSLFGS*IFQLST Trigger: AGTCGATAACTGAAATATGCAGGAGCCAAAGAGCGA...ATCCTGTGTCTCCCAACTTCTGAGGTAAAGGCATATTCCACCTGTCTGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAACAGACAGGTGGAATATGCCTTTACCTCAGAAGTTGGGAGACACAGGATGGTATCTATCTCACATaGCCTCAAACTCAGATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SKQTGGICLYLRSWETQDGIYLT*PQTQIA Trigger: AGCTATCTGAGTTTGAGGCCATGTGAGATAGATACC...ATCCTGTGTCTCCCAACTTCTGAGGTAAAGGCATATTCCACCTGTCTGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCCCTAGGTGGCCAAGGCAACACATACATGAAATGCCATCACGCAGAAGATTAATCAAAACAGACAGGTaGAATATGCCTTTACCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: IPRWPRQHIHEMPSRRRLIKTDR*NMPLPQ Trigger: CTGAGGTAAAGGCATATTCCACCTGTCTGTTTTGAT...TAATCTTCTGCGTGATGGCATTTCATGTATGTGTTGCCTTGGCCACCTAGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAACAGACAGGTGGAATATGCCTTTACCTCAGAAGTTGGGAGACACAGGATATGTTCTTCGCTCTTTaGCTCCTGCATATTTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SKQTGGICLYLRSWETQDMFFAL*LLHISV Trigger: AACTGAAATATGCAGGAGCCAAAGAGCGAAGAACAT...ATCCTGTGTCTCCCAACTTCTGAGGTAAAGGCATATTCCACCTGTCTGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR CAA 90 bp | GCTCCACTCACCCTCCCTTTACAGCTCGCTGTGGTATTGTCTATATaGTCTACACCTTATAATAGAGGCTATAAAAAGGCATTTATAACC | + |
|
Preference number: 2 (lower is better) Translates to: APLTLPLQLAVVLSI*STPYNRGYKKAFIT Trigger: GGTTATAAATGCCTTTTTATAGCCTCTATTATAAGGTGTAGACAATATAGACAATACCACAGCGAGCTGTAAAGGGAGGGTGAGTGGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| 3UTR-3UTR TCA 90 bp | AACACTTCACACATTTCTTTTAGAGGGGTTTCCTATCTCCTTGTGATACTAACAGTCCATTCACTAAGGTaGATGGATGAAGAAGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NTSHISFRGVSYLLVILTVHSLR*MDEEGV Trigger: CACCCCTTCTTCATCCATTCACCTTAGTGAATGGAC...TGTTAGTATCACAAGGAGATAGGAAACCCCTCTAAAAGAAATGTGTGAAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGACACAGGATGATCTTAGTGAGTTCAAGGCCACTCTGGTTACAGAACAACATAAACTTTGGAAATaGAACATCCTTCCTACACTA | + |
|
Preference number: 2 (lower is better) Translates to: WETQDDLSEFKATLVTEQHKLWK*NILPTL Trigger: TAGTGTAGGAAGGATGTTGCATTTCCAAAGTTTATG...TTGTTCTGTAACCAGAGTGGCCTTGAACTCACTAAGATCATCCTGTGTCTCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAATTCTCTTCTTTCTATCTCGACTTCGACTCCTTGATCTGCTCCTGCTTCATGACTTCCTTTCTTTaGGTTTATGTCTGTCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: FQFSSFYLDFDSLICSCFMTSFL*VYVCPH Trigger: GTGAGGACAGACATAAACGCAAAGAAAGGAAGTCAT...GAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAGAAAGAAGAGAATTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR CAA 90 bp | CACATACATGAAATGCCATCACGCAGAAGATTAGAGCAGAATTACTaGGTGAAACCCTGTCTAGAAAAATCAAAACAGACAGGTGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: HIHEMPSRRRLEQNY*VKPCLEKSKQTGGI Trigger: TATTCCACCTGTCTGTTTTGATTTTTCTAGACAGGGTTTCACCAAGTAATTCTGCTCTAATCTTCTGCGTGATGGCATTTCATGTATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCAGAAAAATCTATGCATaGGATTTTATCCCACCCGAA | + |
|
Preference number: 2 (lower is better) Translates to: IVPYSRNSTILICSTHPPRKIYA*DFIPPE Trigger: TTCGGGTGGGATAAAATCTCATGCATAGATTTTTCT...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| 3UTR-3UTR CCA 90 bp | AACACTTCACACATTTCTTTTAGAGGGGTTTCCTATCTCCTTGTGATACTAACAGGCACTCATAAACTTTaGAAATGCAACATCCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NTSHISFRGVSYLLVILTGTHKL*KCNILP Trigger: AGGAAGGATGTTGCATTTCCAAAGTTTATGAGTGCC...TGTTAGTATCACAAGGAGATAGGAAACCCCTCTAAAAGAAATGTGTGAAGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR CCA 72 bp | CACCTTTGCTGCTGTTCAGTGGAGTTTCTGCCAGGCTaGCTTCACAGGGCAGCAGCACATCAGGTTACACTG | + |
|
Preference number: 3 (lower is better) Translates to: HLCCCSVEFLPG*LHRAAAHQVTL Trigger: CAGTGTAACCTGATGTGCTGCTGCCCTGTGAAGCCAGCCTGGCAGAAACTCCACTGAACAGCAGCAAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR TCA 72 bp | CTGCGATGGCGCCTTTCACGCGATCTAGACCTTGAGTaGCTTCTGCCCCGTGATGACTTCCTTTCTTTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: LRWRLSRDLDLE*LLPRDDFLSLR Trigger: ACGCAAAGAAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGTCTAGATCGCGTGAAAGGCGCCATCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000182015.8 ENSMUST00000182093.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR GCA 72 bp | CCCTTTCTAATCTTTGCTGCTGTTCAGTGGAGTTTCTaGCAGGCTGGCTTCACAGGGCAGCAGCACATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PFLIFAAVQWSF*QAGFTGQQHIR Trigger: CCTGATGTGCTGCTGCCCTGTGAAGCCAGCCTGGCAGAAACTCCACTGAACAGCAGCAAAGATTAGAAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182584.8 |
||
| 3UTR GCA 72 bp | CTTCGACTCCTTGATCTGCTCCTGCTTCTAGTCCTATaGCTGTGTCTGGATCTGGATCGGGAACGAGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRLLDLLLLLVL*LCLDLDRERVL Trigger: CAGAACTCGTTCCCGATCCAGATCCAGACACAGGCATAGGACTAGAAGCAGGAGCAGATCAAGGAGTCGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR CCA 72 bp | AATCTTTGCTGCTGTTCAGTGGAGTTTCTGCCAGGCTaGCTTCACAGGGCAGCAGCACATCAGGTTACACTG | + |
|
Preference number: 3 (lower is better) Translates to: NLCCCSVEFLPG*LHRAAAHQVTL Trigger: CAGTGTAACCTGATGTGCTGCTGCCCTGTGAAGCCAGCCTGGCAGAAACTCCACTGAACAGCAGCAAAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182584.8 |
||
| 3UTR-3UTR CAA 90 bp | CGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGATTGTGCTCCTCAGACTaGTGTCTCTTAGAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSRLLPFPASTAMAPFTRLCSSD*CLLEDL Trigger: TAAGTCCTCTAAGAGACACAAGTCTGAGGAGCACAA...TCGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATTGCCAAGGCTTTAGCTaGCAGGGCTGCCATTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PDFSRLRFVAFFLALPEHCQGFS*QGCHLS Trigger: GCTCAAATGGCAGCCCTGCAAGCTAAAGCCTTGGCA...ATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR TCA 72 bp | GCCATTGCAGGTCGGAACCAAGTCCATTCACTAAGGTaGATGGATGAAGAAGGGGTGAGCTCACACCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: AIAGRNQVHSLR*MDEEGVSSHLC Trigger: GCAAAGGTGTGAGCTCACCCCTTCTTCATCCATTCACCTTAGTGAATGGACTTGGTTCCGACCTGCAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR CCA 72 bp | CTCTTGCTCAGCAAACTTCATTGGATTCACAGCTGCTaGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLLSKLHWIHSC*VVVAGHCYASL Trigger: GAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCAATGAAGTTTGCTGAGCAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGTTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SIETSSFPCFYCDGAFHALEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...CGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCCTGCTTCTAGTCCTATGCCTGTGTCTGGATCTGGATCGGGAACGAGTTTTGTGCTCCTCAGACTaGTGTCTCTTAGAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLLLLVLCLCLDLDRERVLCSSD*CLLEDL Trigger: TAAGTCCTCTAAGAGACACAAGTCTGAGGAGCACAA...AACTCGTTCCCGATCCAGATCCAGACACAGGCATAGGACTAGAAGCAGGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR TCA 72 bp | AGGTCGGAACCAAGTCCATTCACTAAGGTGAATGGATaGAGAAGGGGTGAGCTCACACCTTTGCTGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSEPSPFTKVNG*RRGELTPLLLF Trigger: GAACAGCAGCAAAGGTGTGAGCTCACCCCTTCTTCATCCATTCACCTTAGTGAATGGACTTGGTTCCGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR CCA 72 bp | ATTTCTTTGCCCTTTCTAATCTTTGCTGCTGTTCAGTaGAGTTTCTGCCAGGCTGGCTTCACAGGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISLPFLIFAAVQ*SFCQAGFTGQQ Trigger: CTGCTGCCCTGTGAAGCCAGCCTGGCAGAAACTCCACTGAACAGCAGCAAAGATTAGAAAGGGCAAAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182584.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTAGGTGGCCAAGGCAACACATACATGAAATGCCATCACGCAGAAGATTAGGTGAGCTCACACCTTaGCTGCTGTTCAGTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: IPRWPRQHIHEMPSRRRLGELTP*LLFSGV Trigger: AACTCCACTGAACAGCAGCAAAGGTGTGAGCTCACC...TAATCTTCTGCGTGATGGCATTTCATGTATGTGTTGCCTTGGCCACCTAGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCTTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DPYSSIETSSFPCFYCDGLEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...GCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGATCTAGATTGTGCTCCTCAGACTaGTGTCTCTTAGAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: RLLPFPASTAMAPFTRSRLCSSD*CLLEDL Trigger: TAAGTCCTCTAAGAGACACAAGTCTGAGGAGCACAA...TCTAGATCGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGATCTAGACCTTGAGGATGACTTCCTTTCTTaGCGTTTATGTCTGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FLSLLLLRWRLSRDLDLEDDFLS*RLCLSS Trigger: TGAGGACAGACATAAACGCAAAGAAAGGAAGTCATC...CTCAAGGTCTAGATCGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR GCA 72 bp | TTTCTCTTGCTCAGCAAACTTCATTGGATTCACAGCTaGTGGGTTGTAGTAGCTGGGCACTGCTATGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FLLLSKLHWIHS*WVVVAGHCYAS Trigger: ACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCAATGAAGTTTGCTGAGCAAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182556.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCGAGACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGTTGTGCTCCTCAGACTaGTGTCTCTTAGAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: DRDFFRSLLLDRDFFLSLLCSSD*CLLEDL Trigger: TAAGTCCTCTAAGAGACACAAGTCTGAGGAGCACAA...CAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTCTCGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ETFSDPYSSIETSSFPCFLEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...GAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR TCA 72 bp | TTGTTTTGGAGTCAGGGTCTCTCAGCAGATAGCCCCTaGTATCTTAGAATTCTCTATGTAGCCCAGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFWSQGLSADSP*YLRILYVAQAG Trigger: TCCAGCCTGGGCTACATAGAGAATTCTAAGATATCAGGGGCTATCTGCTGAGAGACCCTGACTCCAAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTAGATGACTTCCTTTCTTaGCGTTTATGTCTGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DFFRSLLLDRDFFLSLLLDDFLS*RLCLSS Trigger: TGAGGACAGACATAAACGCAAAGAAAGGAAGTCATC...TAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTAGATCTTGACGATGACTTCCTTTCTTaGCGTTTATGTCTGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DRERVLILRFLSLLLDLDDDFLS*RLCLSS Trigger: TGAGGACAGACATAAACGCAAAGAAAGGAAGTCATC...GTCAAGATCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTAGGTGGCCAAGGCAACACATACATGAAATGCCATCACGCAGAAGATTATTTCTTTGTTTTGTTTaGGAGTCAGGGTCTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IPRWPRQHIHEMPSRRRLFLCFV*ESGSLS Trigger: GCTGAGAGACCCTGACTCCAAAACAAAACAAAGAAA...TAATCTTCTGCGTGATGGCATTTCATGTATGTGTTGCCTTGGCCACCTAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTAGGTGGCCAAGGCAACACATACATGAAATGCCATCACGCAGAAGATTAACAGCAGAGTATTCCTaGAATGAGAAACCCCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IPRWPRQHIHEMPSRRRLTAEYS*NEKPLS Trigger: TGAAAGGGGTTTCTCATTCAAGGAATACTCTGCTGT...TAATCTTCTGCGTGATGGCATTTCATGTATGTGTTGCCTTGGCCACCTAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR TCA 72 bp | TTCAATTCTCTTCTTTCTATCTCGACTTCGACTCCTTaGTCTGCTCCTGCTTCTAGTCCTATGCCTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FNSLLSISTSTP*SAPASSPMPVS Trigger: AGACACAGGCATAGGACTAGAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAGAAAGAAGAGAATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR GCA 72 bp | CGTTGTTCTTGTAATTTCTTTGCCCTTTCTAATCTTTaGTGCTGTTCAGTGGAGTTTCTGCCAGGCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RCSCNFFALSNL*CCSVEFLPGWL Trigger: AAGCCAGCCTGGCAGAAACTCCACTGAACAGCAGCAAAGATTAGAAAGGGCAAAGAAATTACAAGAACAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182584.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGACACAGGATGATCTTAGTGAGTTCAAGGCCACTCTGGTTACAGAACAATTCTGGGTTAAAAGCTaGTCTATACAATTGACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WETQDDLSEFKATLVTEQFWVKS*SIQLTS Trigger: GCTGGTCAATTGTATAGACAAGCTTTTAACCCAGAA...TTGTTCTGTAACCAGAGTGGCCTTGAACTCACTAAGATCATCCTGTGTCTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAATTCTCTTCTTTCTATCTCGACTTCGACTCCTTGATCTGCTCCTGCTTCTATTGTGCTCCTCAGACTaGTGTCTCTTAGAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: SILFFLSRLRLLDLLLLLLCSSD*CLLEDL Trigger: TAAGTCCTCTAAGAGACACAAGTCTGAGGAGCACAA...TAGAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAGAAAGAAGAGAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000182015.8 ENSMUST00000182411.8 ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR TCA 72 bp | GACGTTTATGGACTTCTGCCTCCTAAGTACTGGGACTaGAGGCATGGACTAACACTTCACACATTTCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: DVYGLLPPKYWD*RHGLTLHTFLL Trigger: TAAAAGAAATGTGTGAAGTGTTAGTCCATGCCTTCAGTCCCAGTACTTAGGAGGCAGAAGTCCATAAACGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR GCA 72 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATaGTCCACTCACCCTCCCTTTACAGCTCGCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IVPYSRNSTILI*STHPPFTARCG Trigger: ACCACAGCGAGCTGTAAAGGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| 3UTR TCA 72 bp | TTAAATTACAGGGCTATTCACTCAAAGAAATACTTGTaGCAGAGACAGTCTGACAGAGGGGTTATAGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNYRAIHSKKYL*QRQSDRGVIGV Trigger: GACACCTATAACCCCTCTGTCAGACTGTCTCTGTCACAAGTATTTCTTTGAGTGAATAGCCCTGTAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR GCA 72 bp | GCCAAACAACCACCTGGCACTCATAAACTTTGGAAATaGAACATCCTTCCTACACTACAAGATAATAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AKQPPGTHKLWK*NILPTLQDNKV Trigger: CACTTTATTATCTTGTAGTGTAGGAAGGATGTTGCATTTCCAAAGTTTATGAGTGCCAGGTGGTTGTTTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR CCA 72 bp | AATGTGGCCAAACAACCACCTGGCACTCATAAACTTTaGAAATGCAACATCCTTCCTACACTACAAGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: NVAKQPPGTHKL*KCNILPTLQDN Trigger: ATTATCTTGTAGTGTAGGAAGGATGTTGCATTTCCAAAGTTTATGAGTGCCAGGTGGTTGTTTGGCCACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTTTAATGGAAGTGGGTaGAACCTGATTACAACACTA | + |
|
Preference number: 3 (lower is better) Translates to: IVPYSRNSTILICSTHPPFNGSG*NLITTL Trigger: TAGTGTTGTAATCAGGTTCAACCCACTTCCATTAAA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| 3UTR TCA 72 bp | GTACACAAGACAGCGGACACGAGAAAAATCTATGCATaGGATTTTATCCCACCCGAAGCTTTAATATATTTG | + |
|
Preference number: 3 (lower is better) Translates to: VHKTADTRKIYA*DFIPPEALIYL Trigger: CAAATATATTAAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCTTGTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATTTAATTTTTCCCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QNLIFPRFQQTEICRLLSLEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...AGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGGGAAAAATTAAATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182584.8 ENSMUST00000182861.8 |
||
| 3UTR GCA 72 bp | AGAGATGTGTGCCACAGTGAGCTATCAGCAGATACTTaGTTTAACAAGTACTTAAATTACACAAGATATGTC | + |
|
Preference number: 3 (lower is better) Translates to: RDVCHSELSADT*FNKYLNYTRYV Trigger: GACATATCTTGTGTAATTTAAGTACTTGTTAAAGCAAGTATCTGCTGATAGCTCACTGTGGCACACATCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCAACTGGCCCCAAGACAGGGTTTCTCTGTGTAGCTTTGGTTGTCCTGGCATTTCCCTGCTTCTACTaGGATGGCGCCTTTCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPTGPKTGFLCVALVVLAFPCFY*DGAFHA Trigger: CGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAA...TGCCAGGACAACCAAAGCTACACAGAGAAACCCTGTCTTGGGGCCAGTTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR GCA 90 bp | TCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGCACGCTCTTTGCTTCTaGTCCGGCTCCTGTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIETSSFPCFYCDGAFHAHALCF*SGSCAS Trigger: GGAAGCACAGGAGCCGGAGCAGAAGCAAAGAGCGTG...CGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 |
||
| CDS-3UTR GCA 90 bp | GATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCCACGCTCTTTGCTTCTaGTCCGGCTCCTGTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPYSSIETSSFPCFYCDGHALCF*SGSCAS Trigger: GGAAGCACAGGAGCCGGAGCAGAAGCAAAGAGCGTG...GCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 |
||
| CDS-3UTR GCA 90 bp | CATTGGATTCACAGCTGCTGGGTTGTAGTAGCTGGGCACTGCTATGCCAGTCTCTTTCCCTGCTTCTACTaGGATGGCGCCTTTCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: HWIHSCWVVVAGHCYASLFPCFY*DGAFHA Trigger: CGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAA...GAGACTGGCATAGCAGTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCAGGCTGGCTTCACAGGGCAGCAGCACATCAGGTTACACTGTGAGAACTACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SARLASQGSSTSGYTVRTTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...AGTTCTCACAGTGTAACCTGATGTGCTGCTGCCCTGTGAAGCCAGCCTGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGTTTCTGCCAGGCTGGCTTCACAGGGCAGCAGCACATCAGGTTACACTGACCTTGAGTGACTTCTaGCCCGTGATGACTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEFLPGWLHRAAAHQVTLTLSDF*PVMTSF Trigger: AAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGT...CAGTGTAACCTGATGTGCTGCTGCCCTGTGAAGCCAGCCTGGCAGAAACTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTGGTTCTCTTTGCTTCTaGTCCGGCTCCTGTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFPIPTPRSRLLPFPASGSLCF*SGSCAS Trigger: GGAAGCACAGGAGCCGGAGCAGAAGCAAAGAGAACC...AGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182411.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGCTCAGCAAACTTCATTGGATTCACAGCTGCTGGGTTGTAGTAGCTGGACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLAQQTSLDSQLLGCSSWTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...CCAGCTACTACAACCCAGCAGCTGTGAATCCAATGAAGTTTGCTGAGCAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
||
| CDS-3UTR GCA 90 bp | GATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTAGATCTTGACCTGCTCCGGCTCCTGTaGTTCCTTCCATCATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DRERVLILRFLSLLLDLDLLRLL*FLPSSD Trigger: ATCAGATGATGGAAGGAAGCACAGGAGCCGGAGCAG...GTCAAGATCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCTCCGGCTCCTGTaGTTCCTTCCATCATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DFFRSLLLDRDFFLSLLLLLRLL*FLPSSD Trigger: ATCAGATGATGGAAGGAAGCACAGGAGCCGGAGCAG...TAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTCTGCTCCGGCTCCTGTaGTTCCTTCCATCATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLFPIPTPRSRLLPFPASLLRLL*FLPSSD Trigger: ATCAGATGATGGAAGGAAGCACAGGAGCCGGAGCAG...AGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTTTCCCTGCTTCTACTaGGATGGCGCCTTTCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFFPCFY*DGAFHA Trigger: CGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAA...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | CCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATACCTTGAGTGACTTCTaGCCCGTGATGACTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PDFSRLRFVAFFLALPEHTLSDF*PVMTSF Trigger: AAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGT...ATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTGTAGTAGCTGGGCACTaGTATGCCAGTCTCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFVVAGH*YASLCQ Trigger: TTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTAC...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTGTAGTAGCTGGGCACTaGTATGCCAGTCTCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLVVAGH*YASLCQ Trigger: TTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTAC...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTCCTATGCCTGTGTCTaGATCTGGATCGGGAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFSYACV*IWIGNE Trigger: CTCGTTCCCGATCCAGATCCAGACACAGGCATAGGA...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTGGATTCACAGCTGCTaGGTTGTAGTAGCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLWIHSC*VVVAGH Trigger: GTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCA...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATAAGCTGGGCACTGCTATaGCAGTCTCTGCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLISWALL*QSLPRL Trigger: AAGCCTTGGCAGAGACTGGCATAGCAGTGCCCAGCT...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGCTCAGCAAACTTCATTGGATTCACAGCTGCTGGGTTGTAGTAGCTGGTCCTGTCTCTGCTTCTaGATCGAGACTTTTTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLAQQTSLDSQLLGCSSWSCLCF*IETFSD Trigger: ATCGGAAAAAGTCTCGATCCAGAAGCAGAGACAGGA...CCAGCTACTACAACCCAGCAGCTGTGAATCCAATGAAGTTTGCTGAGCAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
||
| CDS-3UTR TCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTCTAGCTAGTGCTTCTTaGGCGTCCATTGCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLLASAS*ASIAVF Trigger: AAACACAGCAATGGACGCTCAAGAAGCACTAGCTAG...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCACTAGCTAGTGCTTCTTaGGCGTCCATTGCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFPDFSRLRFVAFFLALPLASAS*ASIAVF Trigger: AAACACAGCAATGGACGCTCAAGAAGCACTAGCTAG...TGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTCACGCATTGAAGATGTaGAACCCAAACCCATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFHALKM*NPNPFL Trigger: GAGGAATGGGTTTGGGTTTCACATCTTCAATGCGTG...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGCTCAGCAAACTTCATTGGATTCACAGCTGCTGGGTTGTAGTAGCTGGTGTTCTTTGTCATTGTaGTCCTCAGACTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLAQQTSLDSQLLGCSSWCSLSL*SSDLCL Trigger: GAGACACAAGTCTGAGGAGCACAATGACAAAGAACA...CCAGCTACTACAACCCAGCAGCTGTGAATCCAATGAAGTTTGCTGAGCAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTACCTTGAGTGACTTCTaGCCCGTGATGACTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLTLSDF*PVMTSF Trigger: AAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGT...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCACTTCTTCCTTTCCCTaGTTCTACTGCGATGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPTSSFP*FYCDGA Trigger: GGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGT...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGGAGACACAGGATGATCTTAGTGAGTTCAAGGCCACTCTGGTTACAGAACAATTCTTGAGCGTCCATTaGTGTGTTTCTGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WETQDDLSEFKATLVTEQFLSVH*CVSASE Trigger: TTCAGAGGCAGAAACACAGCAATGGACGCTCAAGAA...TTGTTCTGTAACCAGAGTGGCCTTGAACTCACTAAGATCATCCTGTGTCTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTAGTGGCTGCAGCTGCTaGAGCCATTTCTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFSGCSC*SHFLLF Trigger: AAACAACAAGAAATGGCTGCAGCAGCTGCAGCCACT...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTAGTGGCTGCAGCTGCTaGAGCCATTTCTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLSGCSC*SHFLLF Trigger: AAACAACAAGAAATGGCTGCAGCAGCTGCAGCCACT...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATCCAGTGGCTGCAGCTaGTGCAGCCATTTCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLISSGCS*CSHFLL Trigger: CAACAAGAAATGGCTGCAGCAGCTGCAGCCACTGGA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATAGTAGTAGCTGGGCACTaGTATGCCAGTCTCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLIVVAGH*YASLCQ Trigger: TTGGCAGAGACTGGCATAGCAGTGCCCAGCTACTAC...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTGTCGCCTTCTTTCTTaGCTTGCCAGAGCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFCRLLS*LARAFS Trigger: GGAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACA...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TTTCAATTCTCTTCTTTCTATCTCGACTTCGACTCCTTGATCTGCTCCTGCTTCGAAGTTGGTTCTCTTTaGTTCTGCTCCGGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQFSSFYLDFDSLICSCFEVGSL*FCSGSC Trigger: ACAGGAGCCGGAGCAGAAGCAAAGAGAACCAACTTC...GAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAGAAAGAAGAGAATTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182411.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATACTGGGTTGTAGTAGCTaGGCACTGCTATGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLILGCSS*ALLCQS Trigger: AGACTGGCATAGCAGTGCCCAGCTACTACAACCCAG...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCCTGGGTTGTAGTAGCTaGGCACTGCTATGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPLGCSS*ALLCQS Trigger: AGACTGGCATAGCAGTGCCCAGCTACTACAACCCAG...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATGGATTCACAGCTGCTaGGTTGTAGTAGCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLIWIHSC*VVVAGH Trigger: GTGCCCAGCTACTACAACCCAGCAGCTGTGAATCCA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR CCA 90 bp | TACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTGTTTTAACAAGAAGTTaGTTCTCTTTGCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSSIETSSFPCFYCDGAFVLTRS*FSLLLL Trigger: GAGCAGAAGCAAAGAGAACCAACTTCTTGTTAAAAC...AAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182411.8 |
||
| CDS-3UTR GCA 90 bp | AGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGAGCATTTTTCTTGAGCGTCCATTaGTGTGTTTCTGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFQQTEICRLLSCLARAFFLSVH*CVSASE Trigger: TTCAGAGGCAGAAACACAGCAATGGACGCTCAAGAA...AAATGCTCTGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATGCTATGCCAGTCTCTaGCAAGGCTTTAGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLICYASL*QGFSLQ Trigger: CTGCAAGCTAAAGCCTTGGCAGAGACTGGCATAGCA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTCCTGTCTCTGCTTCTaGATCGAGACTTTTTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLSCLCF*IETFSD Trigger: ATCGGAAAAAGTCTCGATCCAGAAGCAGAGACAGGA...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR TCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCCTAGCTAGTGCTTCTTaGGCGTCCATTGCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPLASAS*ASIAVF Trigger: AAACACAGCAATGGACGCTCAAGAAGCACTAGCTAG...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR TCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATACACGCATTGAAGATGTaGAACCCAAACCCATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLIHALKM*NPNPFL Trigger: GAGGAATGGGTTTGGGTTTCACATCTTCAATGCGTG...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAACAGACAGGTGGAATATGCCTTTACCTCAGAAGTTGGGAGACACAGGATTGTTCTTTGTCATTGTaGTCCTCAGACTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKQTGGICLYLRSWETQDCSLSL*SSDLCL Trigger: GAGACACAAGTCTGAGGAGCACAATGACAAAGAACA...ATCCTGTGTCTCCCAACTTCTGAGGTAAAGGCATATTCCACCTGTCTGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATAACCTTGAGTGACTTCTaGCCCGTGATGACTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLITLSDF*PVMTSF Trigger: AAAGGAAGTCATCACGGGGCAGAAGTCACTCAAGGT...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATAAGTGGCTGCAGCTGCTaGAGCCATTTCTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLISGCSC*SHFLLF Trigger: AAACAACAAGAAATGGCTGCAGCAGCTGCAGCCACT...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTGTCGCCTTCTTTCTTaGCTTGCCAGAGCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPCRLLS*LARAFS Trigger: GGAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATGTCGCCTTCTTTCTTaGCTTGCCAGAGCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLICRLLS*LARAFS Trigger: GGAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR TCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTCTTGCCATTTCATACTaGGCATCAAGATTGCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLLAISY*ASRLRK Trigger: TTTTCGCAATCTTGATGCTCAGTATGAAATGGCAAG...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR TCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCATCCATTCCACGCATTaGAGATGTGAAACCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPIHSTH*RCETQT Trigger: GGTTTGGGTTTCACATCTTCAATGCGTGGAATGGAT...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR TCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATAATCCATTCCACGCATTaGAGATGTGAAACCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLIIHSTH*RCETQT Trigger: GGTTTGGGTTTCACATCTTCAATGCGTGGAATGGAT...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTTCTTGAGCGTCCATTaGTGTGTTTCTGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPFLSVH*CVSASE Trigger: TTCAGAGGCAGAAACACAGCAATGGACGCTCAAGAA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATTCTTGAGCGTCCATTaGTGTGTTTCTGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLIFLSVH*CVSASE Trigger: TTCAGAGGCAGAAACACAGCAATGGACGCTCAAGAA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATCCTGTCTCTGCTTCTaGATCGAGACTTTTTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLISCLCF*IETFSD Trigger: ATCGGAAAAAGTCTCGATCCAGAAGCAGAGACAGGA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR TCA 90 bp | AACACTTCACACATTTCTTTTAGAGGGGTTTCCTATCTCCTTGTGATACTAACACTAGCTAGTGCTTCTTaGGCGTCCATTGCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTSHISFRGVSYLLVILTLASAS*ASIAVF Trigger: AAACACAGCAATGGACGCTCAAGAAGCACTAGCTAG...TGTTAGTATCACAAGGAGATAGGAAACCCCTCTAAAAGAAATGTGTGAAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATTGTGTGTGGGTTTGTaGTCTTGCCATTTCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLILCVGL*SCHFIL Trigger: CAGTATGAAATGGCAAGATCACAAACCCACACACAA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTTGTGTGTGGGTTTGTaGTCTTGCCATTTCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPLCVGL*SCHFIL Trigger: CAGTATGAAATGGCAAGATCACAAACCCACACACAA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTGTTCTTTGTCATTGTaGTCCTCAGACTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPCSLSL*SSDLCL Trigger: GAGACACAAGTCTGAGGAGCACAATGACAAAGAACA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATGTTCTTTGTCATTGTaGTCCTCAGACTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLICSLSL*SSDLCL Trigger: GAGACACAAGTCTGAGGAGCACAATGACAAAGAACA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCATGACTTCCTTTCTTTaGGTTTATGTCTGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPMTSFL*VYVCPH Trigger: GTGAGGACAGACATAAACGCAAAGAAAGGAAGTCAT...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTACTGAGCATCAAGATTaGGAAAAACTTCTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQRTREKSMHEILSHPKLTEHQD*EKLLLV Trigger: AACAAGAAGAAGTTTTTCGCAATCTTGATGCTCAGT...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTACTGAGCATCAAGATTaGGAAAAACTTCTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFTEHQD*EKLLLV Trigger: AACAAGAAGAAGTTTTTCGCAATCTTGATGCTCAGT...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CCA 90 bp | AACACTTCACACATTTCTTTTAGAGGGGTTTCCTATCTCCTTGTGATACTAACATCCTGTCTCTGCTTCTaGATCGAGACTTTTTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTSHISFRGVSYLLVILTSCLCF*IETFSD Trigger: ATCGGAAAAAGTCTCGATCCAGAAGCAGAGACAGGA...TGTTAGTATCACAAGGAGATAGGAAACCCCTCTAAAAGAAATGTGTGAAGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTTCCTCTTTTTCTCTTaGTCAGCAAACTTCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVPYSRNSTILICSTHPPFLFFS*SANFIG Trigger: TCCAATGAAGTTTGCTGAGCAAGAGAAAAAGAGGAA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATTCCTCTTTTTCTCTTaGTCAGCAAACTTCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLIFLFFS*SANFIG Trigger: TCCAATGAAGTTTGCTGAGCAAGAGAAAAAGAGGAA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATAACTGAGCATCAAGATTaGGAAAAACTTCTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WKWVEPDYNTNTSITDLITEHQD*EKLLLV Trigger: AACAAGAAGAAGTTTTTCGCAATCTTGATGCTCAGT...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| 3UTR CAA 72 bp | CCTCAAAGTATTGATATAGTCAAGAATGACCCTGAATaGATTCTCCTGCCTCTTAATGCAAGAATTAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQSIDIVKNDPE*ILLPLNARIND Trigger: ATCGTTAATTCTTGCATTAAGAGGCAGGAGAATCAATTCAGGGTCATTCTTGACTATATCAATACTTTGAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGATCTAGACCTTGAGGCATTAGCACGCTCTTaGCTTCTGCTCCGGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLSLLLLRWRLSRDLDLEALARS*LLLRLL Trigger: CAGGAGCCGGAGCAGAAGCAAAGAGCGTGCTAATGC...CTCAAGGTCTAGATCGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 |
||
| CDS-3UTR CAA 90 bp | CGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGAAGAAGTTGGTTCTCTTaGCTTCTGCTCCGGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSRLLPFPASTAMAPFTRRSWFS*LLLRLL Trigger: CAGGAGCCGGAGCAGAAGCAAAGAGAACCAACTTCT...TCGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182411.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGGCATTAGCACGCTCTTaGCTTCTGCTCCGGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FFRSLLLDRDFFLSLLLLALARS*LLLRLL Trigger: CAGGAGCCGGAGCAGAAGCAAAGAGCGTGCTAATGC...CAGTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 |
||
| CDS-3UTR CAA 90 bp | GTGGAGTTTCTGCCAGGCTGGCTTCACAGGGCAGCAGCACATCAGGTTACACTGTTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VEFLPGWLHRAAAHQVTLLEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...CAGTGTAACCTGATGTGCTGCTGCCCTGTGAAGCCAGCCTGGCAGAAACTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
||
| CDS-3UTR CAA 90 bp | CGAGACTTCTTCCTTTCCCTGCTTCTACTGCGATGGCGCCTTTCACGCGATCTATTCGTTTTCTTTCTCTaGACCTTGACCTCGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RDFFLSLLLLRWRLSRDLFVFFL*TLTSTL Trigger: CAAGGTCGAGGTCAAGGTCAAGAGAAAGAAAACGAA...TAGATCGCGTGAAAGGCGCCATCGCAGTAGAAGCAGGGAAAGGAAGAAGTCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 |
||
| CDS-3UTR CAA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTGCCAAGGCTTTAGCTaGCAGGGCTGCCATTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQRTREKSMHEILSHPKLCQGFS*QGCHLS Trigger: GCTCAAATGGCAGCCCTGCAAGCTAAAGCCTTGGCA...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCTTCTAGTCCTATGCCTGTGTCTGGATCTGGATCGGGAACGAGTTCTGACCTTGACCTCGACCTaGAATAATGATGTTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLVLCLCLDLDRERVLTLTST*NNDVLR Trigger: CCTCAAAACATCATTATTCAAGGTCGAGGTCAAGGT...CAGAACTCGTTCCCGATCCAGATCCAGACACAGGCATAGGACTAGAAGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 |
||
| CDS-3UTR CAA 90 bp | CTATCTCGACTTCGACTCCTTGATCTGCTCCTGCTTCTAGTCCTATGCCTGTGTTTCGTTTTCTTTCTCTaGACCTTGACCTCGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRLRLLDLLLLLVLCLCFVFFL*TLTSTL Trigger: CAAGGTCGAGGTCAAGGTCAAGAGAAAGAAAACGAA...ACACAGGCATAGGACTAGAAGCAGGAGCAGATCAAGGAGTCGAAGTCGAGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATGCCAAGGCTTTAGCTaGCAGGGCTGCCATTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WKWVEPDYNTNTSITDLICQGFS*QGCHLS Trigger: GCTCAAATGGCAGCCCTGCAAGCTAAAGCCTTGGCA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
||
| CDS-3UTR CAA 90 bp | GGATCTGGATCGGGAACGAGTTCTGATCCTTCGTTTCCTATCCCTGCTTCTAGAACCTTGACCTCGACCTaGAATAATGATGTTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGSGTSSDPSFPIPASRTLTST*NNDVLR Trigger: CCTCAAAACATCATTATTCAAGGTCGAGGTCAAGGT...TCTAGAAGCAGGGATAGGAAACGAAGGATCAGAACTCGTTCCCGATCCAGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 ENSMUST00000182411.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGGACTAGGTGTCCGGCTTAGGCTTCTGCTAAATCTTCTTGGTTTTTCATTCGTTTTCTTTCTCTaGACCTTGACCTCGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGGLGVRLRLLLNLLGFSFVFFL*TLTSTL Trigger: CAAGGTCGAGGTCAAGGTCAAGAGAAAGAAAACGAA...TGAAAAACCAAGAAGATTTAGCAGAAGCCTAAGCCGGACACCTAGTCCACCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182015.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTTGTCGCCTTCTTTCTaGCCTTGCCAGAGCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFLSPSF*PCQSIF Trigger: GAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACAA...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CAA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTGTGCTCCTCAGACTaGTGTCTCTTAGAGGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: RQRTREKSMHEILSHPKLLCSSD*CLLEDL Trigger: TAAGTCCTCTAAGAGACACAAGTCTGAGGAGCACAA...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
||
| CDS-3UTR CAA 90 bp | ATCCCTAGGTGGCCAAGGCAACACATACATGAAATGCCATCACGCAGAAGATTAGATGACTTCCTTTCTTaGCGTTTATGTCTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: IPRWPRQHIHEMPSRRRLDDFLS*RLCLSS Trigger: TGAGGACAGACATAAACGCAAAGAAAGGAAGTCATC...TAATCTTCTGCGTGATGGCATTTCATGTATGTGTTGCCTTGGCCACCTAGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111515.8 |
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| CDS-3UTR CAA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFLEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| CDS-3UTR CAA 90 bp | TTTTTCCCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCATTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FFPDFSRLRFVAFFLALPLEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...TGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
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| CDS-3UTR CAA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTGATGACTTCCTTTCTTaGCGTTTATGTCTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: RQRTREKSMHEILSHPKLDDFLS*RLCLSS Trigger: TGAGGACAGACATAAACGCAAAGAAAGGAAGTCATC...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| CDS-3UTR CAA 90 bp | TTTTTCCCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTTGCCTTGCCAGATGACTTCCTTTCTTaGCGTTTATGTCTGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: FFPDFSRLRFVAFFLALPDDFLS*RLCLSS Trigger: TGAGGACAGACATAAACGCAAAGAAAGGAAGTCATC...TGGCAAGGCAAGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
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| CDS-3UTR CAA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTTGTCGCCTTCTTTCTaGCCTTGCCAGAGCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: IVPYSRNSTILICSTHPPLSPSF*PCQSIF Trigger: GAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACAA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| CDS-3UTR CAA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATTGTCGCCTTCTTTCTaGCCTTGCCAGAGCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: WKWVEPDYNTNTSITDLILSPSF*PCQSIF Trigger: GAAAATGCTCTGGCAAGGCAAGAAAGAAGGCGACAA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCAGACTTGTGTCTCTTAGAGGACTTATCTTTGGACTCATGTCTTCTTCCACCTTGACCTCGACCTaGAATAATGATGTTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LLRLVSLRGLIFGLMSSSTLTST*NNDVLR Trigger: CCTCAAAACATCATTATTCAAGGTCGAGGTCAAGGT...GGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAAGAGACACAAGTCTGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182015.8 ENSMUST00000182241.2 |
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| CDS-3UTR CAA 90 bp | ACTTTTTCCGATCCCTACTCCTCGATCGAGACTTCTTCCTTTCCCTGCTTCTACTGTTTTAACAAGAAGTaGGTTCTCTTTGCTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: TFSDPYSSIETSSFPCFYCFNKK*VLFASA Trigger: AGCAGAAGCAAAGAGAACCAACTTCTTGTTAAAACA...GTAGAAGCAGGGAAAGGAAGAAGTCTCGATCGAGGAGTAGGGATCGGAAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182411.8 |
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| CDS-3UTR CAA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTGCAGCCATTTCTTGTaGTTTCTGCTTTTCAACCAT | + |
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Preference number: 5 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFCSHFL*FLLFNH Trigger: ATGGTTGAAAAGCAGAAACAACAAGAAATGGCTGCA...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| CDS-3UTR CAA 90 bp | AGACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTTCCTCTTTTTCTCTaGCTCAGCAAACTTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: RQRTREKSMHEILSHPKLFPLFL*LSKLHW Trigger: CCAATGAAGTTTGCTGAGCAAGAGAAAAAGAGGAAA...AAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| CDS-3UTR CAA 90 bp | GACAGCGGACACGAGAAAAATCTATGCATGAGATTTTATCCCACCCGAAGCTTTTTTCCTCTTTTTCTCTaGCTCAGCAAACTTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: DSGHEKNLCMRFYPTRSFFPLFL*LSKLHW Trigger: CCAATGAAGTTTGCTGAGCAAGAGAAAAAGAGGAAA...AAAGCTTCGGGTGGGATAAAATCTCATGCATAGATTTTTCTCGTGTCCGCTGTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| CDS-3UTR CAA 90 bp | ATTGTGCCTTACAGTAGAAACAGTACTATTTTAATATGCTCCACTCACCCTCCCTTAGAGGACTTATCTTaGGACTCATGTCTTCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: IVPYSRNSTILICSTHPPLEDLS*DSCLLP Trigger: GGGAAGAAGACATGAGTCCAAAGATAAGTCCTCTAA...GGGAGGGTGAGTGGAGCATATTAAAATAGTACTGTTTCTACTGTAAGGCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 |
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| CDS-3UTR CAA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATGCAGCCATTTCTTGTaGTTTCTGCTTTTCAACCAT | + |
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Preference number: 5 (lower is better) Translates to: WKWVEPDYNTNTSITDLICSHFL*FLLFNH Trigger: ATGGTTGAAAAGCAGAAACAACAAGAAATGGCTGCA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
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| CDS-3UTR CAA 90 bp | TGGAAGTGGGTTGAACCTGATTACAACACTAACACCAGTATCACTGATCTGATATTTCCTCTTTTTCTCTaGCTCAGCAAACTTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: WKWVEPDYNTNTSITDLIFPLFL*LSKLHW Trigger: CCAATGAAGTTTGCTGAGCAAGAGAAAAAGAGGAAA...TATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGGTTCAACCCACTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050827.14 ENSMUST00000057795.12 ENSMUST00000182955.8 |
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| CDS-3UTR CAA 90 bp | CAAAATTTAATTTTTCCCAGATTTCAGCAGACTGAGATTTGTCGCCTTCTTTCTGTTCTTGTAATTTCTTaGCCCTTTCTCCTAGCTAGT | + |
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Preference number: 5 (lower is better) Translates to: QNLIFPRFQQTEICRLLSVLVIS*PFLLAS Trigger: ACTAGCTAGGAGAAAGGGCAAAGAAATTACAAGAAC...AGAAAGAAGGCGACAAATCTCAGTCTGCTGAAATCTGGGAAAAATTAAATTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182556.8 |
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