Pregenerated sensors for RSRC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034544

Ensembl transcript IDs: ENSMUST00000046542.13, ENSMUST00000065047.13, ENSMUST00000065074.14, ENSMUST00000160504.2, ENSMUST00000161726.2, ENSMUST00000162036.8, ENSMUST00000162362.8, ENSMUST00000162693.8

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	GCTGGGGGACATCTGTCCTGCTCTAGCATGCTCGCCTTATTCCCGTaGCAGGATCTCTCACTGAACCTGGAGCTGGTCCAGGAGGACCCA	+
Preference number: 1 (lower is better) Translates to: AGGHLSCSSMLALFP*QDLSLNLELVQEDP Trigger: TGGGTCCTCCTGGACCAGCTCCAGGTTCAGTGAGAGATCCTGTCACGGGAATAAGGCGAGCATGCTAGAGCAGGACAGATGTCCCCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 90 bp	CTCTTTGCTTCCCGACAGGCATTAGTGAGTGGCTTTCCTGGGACGTaGCCTCTTGCAGTGTTTCTGCCTGCTACAGGCCTCCACGCAGTG	+
Preference number: 1 (lower is better) Translates to: LFASRQALVSGFPGT*PLAVFLPATGLHAV Trigger: CACTGCGTGGAGGCCTGTAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR GCA 90 bp	GCAGGTGGCTGGAGTATGTCCCTGAAGTACCATGGCCTTAGCCCCTaGCTGTCTCTTTGCTTCCCGACAGGCATTAGTGAGTGGCTTTCC	+
Preference number: 1 (lower is better) Translates to: AGGWSMSLKYHGLSP*LSLCFPTGISEWLS Trigger: GGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAAGAGACAGGCAGGGGCTAAGGCCATGGTACTTCAGGGACATACTCCAGCCACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CCA 90 bp	CTTAGCCCCTGCCTGTCTCTTTGCTTCCCGACAGGCATTAGTGAGTaGCTTTCCTGGGACGTGGCCTCTTGCAGTGTTTCTGCCTGCTAC	+
Preference number: 1 (lower is better) Translates to: LSPCLSLCFPTGISE*LSWDVASCSVSACY Trigger: GTAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAAGAGACAGGCAGGGGCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR TCA 90 bp	GTCCAGGAGGACCCAGTAACTTGTGTGAGCTCCACAGCACACATGTaGTTACACTTGGCTTCTTTCTGTCATGCCCCTCACCCCCTGTGC	+
Preference number: 1 (lower is better) Translates to: VQEDPVTCVSSTAHM*LHLASFCHAPHPLC Trigger: GCACAGGGGGTGAGGGGCATGACAGAAAGAAGCCAAGTGTAATCACATGTGTGCTGTGGAGCTCACACAAGTTACTGGGTCCTCCTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 90 bp	CGTGCATTTCCTGTGTGCTTCCACAGTGTGTGCAGTGTACAAGCATaGAGGCTGGGGGACATCTGTCCTGCTCTAGCATGCTCGCCTTAT	+
Preference number: 1 (lower is better) Translates to: RAFPVCFHSVCSVQA*RLGDICPALACSPY Trigger: ATAAGGCGAGCATGCTAGAGCAGGACAGATGTCCCCCAGCCTCCATGCTTGTACACTGCACACACTGTGGAAGCACACAGGAAATGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR TCA 90 bp	CTACTTGCTGCCATAGAGCTTAGGTGGGGGACGCTGACCACAAGCTaGACTGCCTTAAAAAGATGTGGAGGAGCTGTGGTTTCTCCCTCT	+
Preference number: 1 (lower is better) Translates to: LLAAIELRWGTLTTS*TALKRCGGAVVSPS Trigger: AGAGGGAGAAACCACAGCTCCTCCACATCTTTTTAAGGCAGTTCAGCTTGTGGTCAGCGTCCCCCACCTAAGCTCTATGGCAGCAAGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 90 bp	TTCAGTTACTCTCACCGTGCATTTCCTGTGTGCTTCCACAGTGTGTaGAGTGTACAAGCATGGAGGCTGGGGGACATCTGTCCTGCTCTA	+
Preference number: 1 (lower is better) Translates to: FSYSHRAFPVCFHSV*SVQAWRLGDICPAL Trigger: TAGAGCAGGACAGATGTCCCCCAGCCTCCATGCTTGTACACTGCACACACTGTGGAAGCACACAGGAAATGCACGGTGAGAGTAACTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 90 bp	GATGTGGAGGAGCTGTGGTTTCTCCCTCTTCAGTTACTCTCACCGTaGATTTCCTGTGTGCTTCCACAGTGTGTGCAGTGTACAAGCATG	+
Preference number: 1 (lower is better) Translates to: DVEELWFLPLQLLSP*ISCVLPQCVQCTSM Trigger: CATGCTTGTACACTGCACACACTGTGGAAGCACACAGGAAATGCACGGTGAGAGTAACTGAAGAGGGAGAAACCACAGCTCCTCCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR TCA 90 bp	CCAGAGTGTCTAGCATGCCATTGCTATGAGGCATTTTCTTCCCGGTaGCAGTTCTCCAGCTTAATCCGCGGAAAGCGGCAATTGAAAAGG	+
Preference number: 1 (lower is better) Translates to: PECLACHCYEAFSSR*QFSSLIRGKRQLKR Trigger: CCTTTTCAATTGCCGCTTTCCGCGGATTAAGCTGGAGAACTGTCACCGGGAAGAAAATGCCTCATAGCAATGGCATGCTAGACACTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR TCA 90 bp	AGCATGCATTGTAGGATACCCAGAGTGTCTAGCATGCCATTGCTATaGGGCATTTTCTTCCCGGTGACAGTTCTCCAGCTTAATCCGCGG	+
Preference number: 1 (lower is better) Translates to: SMHCRIPRVSSMPLL*GIFFPVTVLQLNPR Trigger: CCGCGGATTAAGCTGGAGAACTGTCACCGGGAAGAAAATGCCTCATAGCAATGGCATGCTAGACACTCTGGGTATCCTACAATGCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 90 bp	GCCCCTCACCCCCTGTGCTGGTATACAAACACATATCTTTACCCTTaGAAGAAAGAGCTCTTGCCTACTAAGCCATTTCTTCAGCCCAAC	+
Preference number: 1 (lower is better) Translates to: APHPLCWYTNTYLYP*KKELLPTKPFLQPN Trigger: GTTGGGCTGAAGAAATGGCTTAGTAGGCAAGAGCTCTTTCTTGCAAGGGTAAAGATATGTGTTTGTATACCAGCACAGGGGGTGAGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 90 bp	ACCATAGAAACATCTCAGCACAGGACCACAGGACTTCTGCCTTTGTaGAATACTGCCACCTGGTGGTCCAACTGGAAAATGACTTTCCTA	+
Preference number: 1 (lower is better) Translates to: TIETSQHRTTGLLPL*NTATWWSNWKMTFL Trigger: TAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTGCTGAGATGTTTCTATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 90 bp	CCCATTTTGTACAGCAAGGCCCATAGCTCTTCCCTCTGGCATGTTTaGTATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGT	+
Preference number: 1 (lower is better) Translates to: PILYSKAHSSSLWHV*YGLQRCPRLSIREC Trigger: ACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATGGGCCTTGCTGTACAAAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CCA 90 bp	CAGCACAGGACCACAGGACTTCTGCCTTTGTGCAATACTGCCACCTaGTGGTCCAACTGGAAAATGACTTTCCTAATCCTTCAATTAACA	+
Preference number: 1 (lower is better) Translates to: QHRTTGLLPLCNTAT*WSNWKMTFLILQLT Trigger: TGTTAATTGAAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 90 bp	CACAGGACCACAGGACTTCTGCCTTTGTGCAATACTGCCACCTGGTaGTCCAACTGGAAAATGACTTTCCTAATCCTTCAATTAACAGAA	+
Preference number: 1 (lower is better) Translates to: HRTTGLLPLCNTATW*SNWKMTFLILQLTE Trigger: TTCTGTTAATTGAAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 90 bp	CTGCTACATATGTGGCACAGGATTATTTACTCTGCTTTTGAACACTaGGGGGATTATCTGCCAGACACAACAGTCTTAAGGCTAAACACT	+
Preference number: 1 (lower is better) Translates to: LLHMWHRIIYSAFEH*GDYLPDTTVLRLNT Trigger: AGTGTTTAGCCTTAAGACTGTTGTGTCTGGCAGATAATCCCCCCAGTGTTCAAAAGCAGAGTAAATAATCCTGTGCCACATATGTAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR TCA 90 bp	CTTCTGTCACAGCAATGCACAGTGATGACTAAAATATTGGGCATATaGTTTCCACAGGTAAAGACTGAAGTCAGGTTACAGGTTTCAAAA	+
Preference number: 1 (lower is better) Translates to: LLSQQCTVMTKILGI*FPQVKTEVRLQVSK Trigger: TTTTGAAACCTGTAACCTGACTTCAGTCTTTACCTGTGGAAATCATATGCCCAATATTTTAGTCATCACTGTGCATTGCTGTGACAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR TCA 90 bp	TATTTTTATTGCAGTATAGATGGAAGAAGTGTGGAAGACTCCCTATaGCCCATTGATAGCGTATATCCATTCCTAGATATACACTTCCTA	+
Preference number: 1 (lower is better) Translates to: YFYCSIDGRSVEDSL*PIDSVYPFLDIHFL Trigger: TAGGAAGTGTATATCTAGGAATGGATATACGCTATCAATGGGTCATAGGGAGTCTTCCACACTTCTTCCATCTATACTGCAATAAAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	AGCTACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTGGAGTATGTCCCTGCAGGCCTCCACGCAGTaGAGCCAGCTGACCATGGCC	+
Preference number: 2 (lower is better) Translates to: SYQEVGDRLEAGGWSMSLQASTQ*SQLTMA Trigger: GGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTG...CAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR TCA 90 bp	AGCTACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTGGAGTATGTCCCTGCGCAGTGGAGCCAGCTaGCCATGGCCTGACATTGCT	+
Preference number: 2 (lower is better) Translates to: SYQEVGDRLEAGGWSMSLRSGAS*PWPDIA Trigger: AGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCG...CAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	GCCCATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCGGAGGGGGCAGACACTaGCTAGCAGGAGTGCTGCAA	+
Preference number: 2 (lower is better) Translates to: AHSSSLWHVWYGLQRCPRGGGRH*LAGVLQ Trigger: TTGCAGCACTCCTGCTAGGCAGTGTCTGCCCCCTCC...GCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	AGCTACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTGGAGTATGTCCCTGACAGGCATTAGTGAGTaGCTTTCCTGGGACGTGGCC	+
Preference number: 2 (lower is better) Translates to: SYQEVGDRLEAGGWSMSLTGISE*LSWDVA Trigger: GGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGT...CAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR TCA 90 bp	GGGCAACGGAATCCACAGCAGGCAACAGAGTCAGGGGTAGCCCTGGCTGCAGTTGCATTTTCTTCCCGGTaGCAGTTCTCCAGCTTAATC	+
Preference number: 2 (lower is better) Translates to: GQRNPQQATESGVALAAVAFSSR*QFSSLI Trigger: GATTAAGCTGGAGAACTGTCACCGGGAAGAAAATGC...AACTGCAGCCAGGGCTACCCCTGACTCTGTTGCCTGCTGTGGATTCCGTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR GCA 90 bp	GCCCATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCCATGGCCTTAGCCCCTaGCTGTCTCTTTGCTTCCCG	+
Preference number: 2 (lower is better) Translates to: AHSSSLWHVWYGLQRCPRHGLSP*LSLCFP Trigger: CGGGAAGCAAAGAGACAGGCAGGGGCTAAGGCCATG...GCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	GGGCAACGGAATCCACAGCAGGCAACAGAGTCAGGGGTAGCCCTGGCTGCAGTTACCCAGCTACACATCTaGTACATATGTGGCACAGGA	+
Preference number: 2 (lower is better) Translates to: GQRNPQQATESGVALAAVTQLHI*YICGTG Trigger: TCCTGTGCCACATATGTAGCAGATGTGTAGCTGGGT...AACTGCAGCCAGGGCTACCCCTGACTCTGTTGCCTGCTGTGGATTCCGTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CCA 90 bp	ACTTTATCAATGGACTGCACCATGCACTTAGAGCTGAGTGAGCTACCAGGAGGTCAGGCCTCCACGCAGTaGAGCCAGCTGACCATGGCC	+
Preference number: 2 (lower is better) Translates to: TLSMDCTMHLELSELPGGQASTQ*SQLTMA Trigger: GGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTG...ACCTCCTGGTAGCTCACTCAGCTCTAAGTGCATGGTGCAGTCCATTGATAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	GCCCATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCGGCTTTCCTGGGACGTaGCCTCTTGCAGTGTTTCTG	+
Preference number: 2 (lower is better) Translates to: AHSSSLWHVWYGLQRCPRGFPGT*PLAVFL Trigger: CAGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCC...GCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGTGGGACGTGGCCTCTTaGAGTGTTTCTGCCTGCTAC	+
Preference number: 2 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLWDVAS*SVSACY Trigger: GTAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCA...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGGGCTTTCCTGGGACGTaGCCTCTTGCAGTGTTTCTG	+
Preference number: 2 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLGFPGT*PLAVFL Trigger: CAGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCC...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CAA 90 bp	GGATCTCTCACTGAACCTGGAGCTGGTCCAGGAGGACCCAGTAACTaGTGTGAGCTCCACAGCACACATGTGATTACACTTGGCTTCTTT	+
Preference number: 2 (lower is better) Translates to: GSLTEPGAGPGGPSN*CELHSTHVITLGFF Trigger: AAAGAAGCCAAGTGTAATCACATGTGTGCTGTGGAGCTCACACAAGTTACTGGGTCCTCCTGGACCAGCTCCAGGTTCAGTGAGAGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR TCA 90 bp	GAGATTAATCCCTTCCGAAATCCCTACTGCATAGCCGTGTTCACATTAACAACCCGCAGTGGAGCCAGCTaGCCATGGCCTGACATTGCT	+
Preference number: 2 (lower is better) Translates to: EINPFRNPYCIAVFTLTTRSGAS*PWPDIA Trigger: AGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCG...GGTTGTTAATGTGAACACGGCTATGCAGTAGGGATTTCGGAAGGGATTAATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR TCA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCCGCAGTGGAGCCAGCTaGCCATGGCCTGACATTGCT	+
Preference number: 2 (lower is better) Translates to: ASFILGMFICRAKENSLCRSGAS*PWPDIA Trigger: AGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCG...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	ACTTTATCAATGGACTGCACCATGCACTTAGAGCTGAGTGAGCTACCAGGAGGTTGGGACGTGGCCTCTTaGAGTGTTTCTGCCTGCTAC	+
Preference number: 2 (lower is better) Translates to: TLSMDCTMHLELSELPGGWDVAS*SVSACY Trigger: GTAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCA...ACCTCCTGGTAGCTCACTCAGCTCTAAGTGCATGGTGCAGTCCATTGATAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	ATTCTGTGTGAGGGAAAGTGGGACACGCAGTCCAACAAGACTCAAGAACTCAACCGTACCAACCCACACTaGCACACCAAGTCACTGCAC	+
Preference number: 2 (lower is better) Translates to: ILCEGKWDTQSNKTQELNRTNPH*HTKSLH Trigger: GTGCAGTGACTTGGTGTGCCAGTGTGGGTTGGTACG...GTTGAGTTCTTGAGTCTTGTTGGACTGCGTGTCCCACTTTCCCTCACACAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR GCA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTGGAGGGGGCAGACACTaGCTAGCAGGAGTGCTGCAA	+
Preference number: 2 (lower is better) Translates to: SVRSCHFSSLTEKRTSVAGGGRH*LAGVLQ Trigger: TTGCAGCACTCCTGCTAGGCAGTGTCTGCCCCCTCC...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	CCCCTCCCATGCCATCCAGGTTTCAAACATTTGTATATTTCTGATCTACTGAGCGGCTTCTTTCTGTCATaGCCCTCACCCCCTGTGCTG	+
Preference number: 2 (lower is better) Translates to: PLPCHPGFKHLYISDLLSGFFLS*PSPPVL Trigger: CAGCACAGGGGGTGAGGGGCATGACAGAAAGAAGCC...GCTCAGTAGATCAGAAATATACAAATGTTTGAAACCTGGATGGCATGGGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CCA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGCAGACTAGAAGCAGGTaGCTGGAGTATGTCCCTGAA	+
Preference number: 2 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLQTRSR*LEYVPE Trigger: TTCAGGGACATACTCCAGCCACCTGCTTCTAGTCTG...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	GAGATTAATCCCTTCCGAAATCCCTACTGCATAGCCGTGTTCACATTAACAACCCTCTTGCAGTGTTTCTaGCTGCTACAGGCCTCCACG	+
Preference number: 2 (lower is better) Translates to: EINPFRNPYCIAVFTLTTLLQCF*LLQAST Trigger: CGTGGAGGCCTGTAGCAGGCAGAAACACTGCAAGAG...GGTTGTTAATGTGAACACGGCTATGCAGTAGGGATTTCGGAAGGGATTAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCCATGGCCTTAGCCCCTaGCTGTCTCTTTGCTTCCCG	+
Preference number: 2 (lower is better) Translates to: TLPSRSAARALISQKFFFHGLSP*LSLCFP Trigger: CGGGAAGCAAAGAGACAGGCAGGGGCTAAGGCCATG...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	GAGATTAATCCCTTCCGAAATCCCTACTGCATAGCCGTGTTCACATTAACAACCACAGGCATTAGTGAGTaGCTTTCCTGGGACGTGGCC	+
Preference number: 2 (lower is better) Translates to: EINPFRNPYCIAVFTLTTTGISE*LSWDVA Trigger: GGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGT...GGTTGTTAATGTGAACACGGCTATGCAGTAGGGATTTCGGAAGGGATTAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	GTAAGAGAAAAATTTGGCTCAACCATAGAAACATCTCAGCACAGGACCACAGGAGAAGATCTGGGGAGCTaGGCCCTGGTGATTCAGTCC	+
Preference number: 2 (lower is better) Translates to: VREKFGSTIETSQHRTTGEDLGS*ALVIQS Trigger: GGACTGAATCACCAGGGCCCAGCTCCCCAGATCTTC...TCCTGTGGTCCTGTGCTGAGATGTTTCTATGGTTGAGCCAAATTTTTCTCTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CCA 90 bp	CTGTCATGCCCCTCACCCCCTGTGCTGGTATACAAACACATATCTTTACCCTTGTGCAATACTGCCACCTaGTGGTCCAACTGGAAAATG	+
Preference number: 2 (lower is better) Translates to: LSCPSPPVLVYKHISLPLCNTAT*WSNWKM Trigger: CATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCA...CAAGGGTAAAGATATGTGTTTGTATACCAGCACAGGGGGTGAGGGGCATGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CAA 90 bp	TCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTaGTCTATTAGAGAATGTCATTCTACACACGACACAGCGGCTTCC	+
Preference number: 2 (lower is better) Translates to: SSLWHVWYGLQRCPR*SIRECHSTHDTAAS Trigger: GGAAGCCGCTGTGTCGTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CAA 90 bp	TCAACCATAGAAACATCTCAGCACAGGACCACAGGACTTCTGCCTTaGTGCAATACTGCCACCTGGTGGTCCAACTGGAAAATGACTTTC	+
Preference number: 2 (lower is better) Translates to: STIETSQHRTTGLLP*CNTATWWSNWKMTF Trigger: GAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTGCTGAGATGTTTCTATGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR GCA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTCTCTTGCAGTGTTTCTaGCTGCTACAGGCCTCCACG	+
Preference number: 2 (lower is better) Translates to: SVRSCHFSSLTEKRTSVALLQCF*LLQAST Trigger: CGTGGAGGCCTGTAGCAGGCAGAAACACTGCAAGAG...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR TCA 90 bp	CCCCTCCCATGCCATCCAGGTTTCAAACATTTGTATATTTCTGATCTACTGAGCACCCAATATTCTGTGTaGGGGAAAGTGGGACACGCA	+
Preference number: 2 (lower is better) Translates to: PLPCHPGFKHLYISDLLSTQYSV*GKVGHA Trigger: TGCGTGTCCCACTTTCCCTCACACAGAATATTGGGT...GCTCAGTAGATCAGAAATATACAAATGTTTGAAACCTGGATGGCATGGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR GCA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACTGGGACGTGGCCTCTTaGAGTGTTTCTGCCTGCTAC	+
Preference number: 2 (lower is better) Translates to: YGLQRCPRLSIRECHSTHWDVAS*SVSACY Trigger: GTAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCA...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACGGCTTTCCTGGGACGTaGCCTCTTGCAGTGTTTCTG	+
Preference number: 2 (lower is better) Translates to: YGLQRCPRLSIRECHSTHGFPGT*PLAVFL Trigger: CAGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCC...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR TCA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCGTTTGTGCCAGGGGTTaGAATCCCATTTTGTACAGC	+
Preference number: 2 (lower is better) Translates to: ASFILGMFICRAKENSLCVCARG*NPILYS Trigger: GCTGTACAAAATGGGATTTCAACCCCTGGCACAAAC...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR TCA 90 bp	GTAAGAGAAAAATTTGGCTCAACCATAGAAACATCTCAGCACAGGACCACAGGAAGCATGCCATTGCTATaGGGCATTTTCTTCCCGGTG	+
Preference number: 2 (lower is better) Translates to: VREKFGSTIETSQHRTTGSMPLL*GIFFPV Trigger: CACCGGGAAGAAAATGCCTCATAGCAATGGCATGCT...TCCTGTGGTCCTGTGCTGAGATGTTTCTATGGTTGAGCCAAATTTTTCTCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCCAGACTAGAAGCAGGTaGCTGGAGTATGTCCCTGAA	+
Preference number: 2 (lower is better) Translates to: TLPSRSAARALISQKFFFQTRSR*LEYVPE Trigger: TTCAGGGACATACTCCAGCCACCTGCTTCTAGTCTG...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CCA 90 bp	AACTTGTGTGAGCTCCACAGCACACATGTGATTACACTTGGCTTCTTTCTGTCATCTGCTTTTGAACACTaGGGGGATTATCTGCCAGAC	+
Preference number: 2 (lower is better) Translates to: NLCELHSTHVITLGFFLSSAFEH*GDYLPD Trigger: GTCTGGCAGATAATCCCCCCAGTGTTCAAAAGCAGA...TGACAGAAAGAAGCCAAGTGTAATCACATGTGTGCTGTGGAGCTCACACAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CCA 90 bp	CTGAACTGCCTTAAAAAGATGTGGAGGAGCTGTGGTTTCTCCCTCTTCAGTTACACCTGGTGGTCCAACTaGAAAATGACTTTCCTAATC	+
Preference number: 2 (lower is better) Translates to: LNCLKKMWRSCGFSLFSYTWWSN*KMTFLI Trigger: GATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGT...GTAACTGAAGAGGGAGAAACCACAGCTCCTCCACATCTTTTTAAGGCAGTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR TCA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCATTCTTTTTCCATCATaGCACTGGGTCAGGCACATA	+
Preference number: 2 (lower is better) Translates to: ASFILGMFICRAKENSLCILFPS*HWVRHI Trigger: TATGTGCCTGACCCAGTGTCATGATGGAAAAAGAAT...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR TCA 90 bp	TACTGCCACCTGGTGGTCCAACTGGAAAATGACTTTCCTAATCCTTCAATTAACATTCACTTTATATCTTaGGTGCAGCCCTACCACTCC	+
Preference number: 2 (lower is better) Translates to: YCHLVVQLENDFPNPSINIHFIS*VQPYHS Trigger: GGAGTGGTAGGGCTGCACTCAAGATATAAAGTGAAT...GTTAATTGAAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR GCA 90 bp	CATCACCCCTCCCATGCCATCCAGGTTTCAAACATTTGTATATTTCTGATCTACCTAGCTAGATCAGCATaGATTGTAGGATACCCAGAG	+
Preference number: 2 (lower is better) Translates to: HHPSHAIQVSNICIFLIYLARSA*IVGYPE Trigger: CTCTGGGTATCCTACAATGCATGCTGATCTAGCTAG...GTAGATCAGAAATATACAAATGTTTGAAACCTGGATGGCATGGGAGGGGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CCA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTTCCCTCTGGCATGTTTaGTATGGACTTCAGAGATGT	+
Preference number: 2 (lower is better) Translates to: SVRSCHFSSLTEKRTSVASLWHV*YGLQRC Trigger: ACATCTCTGAAGTCCATACCAAACATGCCAGAGGGA...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	CCTAGTGATGAAGTTATAATACACATTTATGAACCTGAGTTAGAGGTAGACCCAGCCCCTCACCCCCTGTaGTGGTATACAAACACATAT	+
Preference number: 2 (lower is better) Translates to: PSDEVIIHIYEPELEVDPAPHPL*WYTNTY Trigger: ATATGTGTTTGTATACCAGCACAGGGGGTGAGGGGC...TGGGTCTACCTCTAACTCAGGTTCATAAATGTGTATTATAACTTCATCACTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CCA 90 bp	GTAAGAGAAAAATTTGGCTCAACCATAGAAACATCTCAGCACAGGACCACAGGAGGTGCCAAGTTGATGTaGGACAACATCTTAAAACAA	+
Preference number: 2 (lower is better) Translates to: VREKFGSTIETSQHRTTGGAKLM*DNILKQ Trigger: TTGTTTTAAGATGTTGTCCCACATCAACTTGGCACC...TCCTGTGGTCCTGTGCTGAGATGTTTCTATGGTTGAGCCAAATTTTTCTCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR GCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCCTTCTGTCACAGCAATaGACAGTGATGACTAAAATA	+
Preference number: 2 (lower is better) Translates to: TLPSRSAARALISQKFFFLLSQQ*TVMTKI Trigger: TATTTTAGTCATCACTGTGCATTGCTGTGACAGAAG...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTCTTCTGTCACAGCAATaGACAGTGATGACTAAAATA	+
Preference number: 2 (lower is better) Translates to: SVRSCHFSSLTEKRTSVALLSQQ*TVMTKI Trigger: TATTTTAGTCATCACTGTGCATTGCTGTGACAGAAG...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR GCA 90 bp	CCTAGTGATGAAGTTATAATACACATTTATGAACCTGAGTTAGAGGTAGACCCAGACCACAAGCTGAACTaGCTTAAAAAGATGTGGAGG	+
Preference number: 2 (lower is better) Translates to: PSDEVIIHIYEPELEVDPDHKLN*LKKMWR Trigger: CCTCCACATCTTTTTAAGGCAGTTCAGCTTGTGGTC...TGGGTCTACCTCTAACTCAGGTTCATAAATGTGTATTATAACTTCATCACTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR GCA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACCTTCTGTCACAGCAATaGACAGTGATGACTAAAATA	+
Preference number: 2 (lower is better) Translates to: YGLQRCPRLSIRECHSTHLLSQQ*TVMTKI Trigger: TATTTTAGTCATCACTGTGCATTGCTGTGACAGAAG...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR GCA 72 bp	GTGGCTTTCCTGGGACGTGGCCTCTTGCAGTGTTTCTaGCTGCTACAGGCCTCCACGCAGTGGAGCCAGCTG	+
Preference number: 3 (lower is better) Translates to: VAFLGRGLLQCF*LLQASTQWSQL Trigger: CAGCTGGCTCCACTGCGTGGAGGCCTGTAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR GCA 72 bp	GGCATTAGTGAGTGGCTTTCCTGGGACGTGGCCTCTTaGAGTGTTTCTGCCTGCTACAGGCCTCCACGCAGT	+
Preference number: 3 (lower is better) Translates to: GISEWLSWDVAS*SVSACYRPPRS Trigger: ACTGCGTGGAGGCCTGTAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR GCA 72 bp	CACGACACAGCGGCTTCCTCAGGAGGGGGCAGACACTaGCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTC	+
Preference number: 3 (lower is better) Translates to: HDTAASSGGGRH*LAGVLQELLFL Trigger: GAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGTCTGCCCCCTCCTGAGGAAGCCGCTGTGTCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CCA 72 bp	TACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTaGAGTATGTCCCTGAAGTACCATGGCCTTAGCCCC	+
Preference number: 3 (lower is better) Translates to: YQEVGDRLEAGG*SMSLKYHGLSP Trigger: GGGGCTAAGGCCATGGTACTTCAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CCA 72 bp	CCTGTGTGCTTCCACAGTGTGTGCAGTGTACAAGCATaGAGGCTGGGGGACATCTGTCCTGCTCTAGCATGC	+
Preference number: 3 (lower is better) Translates to: PVCFHSVCSVQA*RLGDICPALAC Trigger: GCATGCTAGAGCAGGACAGATGTCCCCCAGCCTCCATGCTTGTACACTGCACACACTGTGGAAGCACACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR TCA 72 bp	CATCTGTCCTGCTCTAGCATGCTCGCCTTATTCCCGTaGCAGGATCTCTCACTGAACCTGGAGCTGGTCCAG	+
Preference number: 3 (lower is better) Translates to: HLSCSSMLALFP*QDLSLNLELVQ Trigger: CTGGACCAGCTCCAGGTTCAGTGAGAGATCCTGTCACGGGAATAAGGCGAGCATGCTAGAGCAGGACAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	GAGTCAGGGGTAGCCCTGGCTGCAGTTGTGGGGACCTaGATGAAGACCCAGCTACACATCTGCTACATATGT	+
Preference number: 3 (lower is better) Translates to: ESGVALAAVVGT*MKTQLHICYIC Trigger: ACATATGTAGCAGATGTGTAGCTGGGTCTTCATGCAGGTCCCCACAACTGCAGCCAGGGCTACCCCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CAA 90 bp	AGCTACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTGGAGTATGTCCCTGGGACTGAGTCCACACTaGACACAAAACATGTTGCCC	+
Preference number: 3 (lower is better) Translates to: SYQEVGDRLEAGGWSMSLGLSPH*TQNMLP Trigger: GGGCAACATGTTTTGTGTCAAGTGTGGACTCAGTCC...CAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR GCA 72 bp	TGGAGTATGTCCCTGAAGTACCATGGCCTTAGCCCCTaGCTGTCTCTTTGCTTCCCGACAGGCATTAGTGAG	+
Preference number: 3 (lower is better) Translates to: WSMSLKYHGLSP*LSLCFPTGISE Trigger: CTCACTAATGCCTGTCGGGAAGCAAAGAGACAGGCAGGGGCTAAGGCCATGGTACTTCAGGGACATACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR GCA 72 bp	TCTCACCGTGCATTTCCTGTGTGCTTCCACAGTGTGTaGAGTGTACAAGCATGGAGGCTGGGGGACATCTGT	+
Preference number: 3 (lower is better) Translates to: SHRAFPVCFHSV*SVQAWRLGDIC Trigger: ACAGATGTCCCCCAGCCTCCATGCTTGTACACTGCACACACTGTGGAAGCACACAGGAAATGCACGGTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 72 bp	TGCCTGTCTCTTTGCTTCCCGACAGGCATTAGTGAGTaGCTTTCCTGGGACGTGGCCTCTTGCAGTGTTTCT	+
Preference number: 3 (lower is better) Translates to: CLSLCFPTGISE*LSWDVASCSVS Trigger: AGAAACACTGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAAGAGACAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR-3UTR CAA 90 bp	ACTTTATCAATGGACTGCACCATGCACTTAGAGCTGAGTGAGCTACCAGGAGGTCTGGGACGTGGCCTCTaGCAGTGTTTCTGCCTGCTA	+
Preference number: 3 (lower is better) Translates to: TLSMDCTMHLELSELPGGLGRGL*QCFCLL Trigger: TAGCAGGCAGAAACACTGCAAGAGGCCACGTCCCAG...ACCTCCTGGTAGCTCACTCAGCTCTAAGTGCATGGTGCAGTCCATTGATAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR TCA 72 bp	CTAGCATGCCATTGCTATGAGGCATTTTCTTCCCGGTaGCAGTTCTCCAGCTTAATCCGCGGAAAGCGGCAA	+
Preference number: 3 (lower is better) Translates to: LACHCYEAFSSR*QFSSLIRGKRQ Trigger: TTGCCGCTTTCCGCGGATTAAGCTGGAGAACTGTCACCGGGAAGAAAATGCCTCATAGCAATGGCATGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	GACGGTTACCGGAGCATGAGGACTTTATCAATGGACTaGACCATGCACTTAGAGCTGAGTGAGCTACCAGGA	+
Preference number: 3 (lower is better) Translates to: DGYRSMRTLSMD*TMHLELSELPG Trigger: TCCTGGTAGCTCACTCAGCTCTAAGTGCATGGTGCAGTCCATTGATAAAGTCCTCATGCTCCGGTAACCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR GCA 72 bp	GCACAGGACCACAGGACTTCTGCCTTTGTGCAATACTaGCACCTGGTGGTCCAACTGGAAAATGACTTTCCT	+
Preference number: 3 (lower is better) Translates to: AQDHRTSAFVQY*HLVVQLENDFP Trigger: AGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	ACATCTCAGCACAGGACCACAGGACTTCTGCCTTTGTaGAATACTGCCACCTGGTGGTCCAACTGGAAAATG	+
Preference number: 3 (lower is better) Translates to: TSQHRTTGLLPL*NTATWWSNWKM Trigger: CATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTGCTGAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	TCCCTCTTCAGTTACTCTCACCGTGCATTTCCTGTGTaGTTCCACAGTGTGTGCAGTGTACAAGCATGGAGG	+
Preference number: 3 (lower is better) Translates to: SLFSYSHRAFPV*FHSVCSVQAWR Trigger: CCTCCATGCTTGTACACTGCACACACTGTGGAAGCACACAGGAAATGCACGGTGAGAGTAACTGAAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	GAGCTGTGGTTTCTCCCTCTTCAGTTACTCTCACCGTaGATTTCCTGTGTGCTTCCACAGTGTGTGCAGTGT	+
Preference number: 3 (lower is better) Translates to: ELWFLPLQLLSP*ISCVLPQCVQC Trigger: ACACTGCACACACTGTGGAAGCACACAGGAAATGCACGGTGAGAGTAACTGAAGAGGGAGAAACCACAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CAA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGGGACTGAGTCCACACTaGACACAAAACATGTTGCCC	+
Preference number: 3 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLGLSPH*TQNMLP Trigger: GGGCAACATGTTTTGTGTCAAGTGTGGACTCAGTCC...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR TCA 72 bp	TGTAGGATACCCAGAGTGTCTAGCATGCCATTGCTATaGGGCATTTTCTTCCCGGTGACAGTTCTCCAGCTT	+
Preference number: 3 (lower is better) Translates to: CRIPRVSSMPLL*GIFFPVTVLQL Trigger: AAGCTGGAGAACTGTCACCGGGAAGAAAATGCCTCATAGCAATGGCATGCTAGACACTCTGGGTATCCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	CACTTGGCTTCTTTCTGTCATGCCCCTCACCCCCTGTaGTGGTATACAAACACATATCTTTACCCTTGCAAG	+
Preference number: 3 (lower is better) Translates to: HLASFCHAPHPL*WYTNTYLYPCK Trigger: CTTGCAAGGGTAAAGATATGTGTTTGTATACCAGCACAGGGGGTGAGGGGCATGACAGAAAGAAGCCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 72 bp	TACAGCAAGGCCCATAGCTCTTCCCTCTGGCATGTTTaGTATGGACTTCAGAGATGTCCACGCTTGTCTATT	+
Preference number: 3 (lower is better) Translates to: YSKAHSSSLWHV*YGLQRCPRLSI Trigger: AATAGACAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATGGGCCTTGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CCA 72 bp	GACGCTGACCACAAGCTGAACTGCCTTAAAAAGATGTaGAGGAGCTGTGGTTTCTCCCTCTTCAGTTACTCT	+
Preference number: 3 (lower is better) Translates to: DADHKLNCLKKM*RSCGFSLFSYS Trigger: AGAGTAACTGAAGAGGGAGAAACCACAGCTCCTCCACATCTTTTTAAGGCAGTTCAGCTTGTGGTCAGCGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CAA 90 bp	TTTCTCCCTCTTCAGTTACTCTCACCGTGCATTTCCTGTGTGCTTCCACAGTGTCACATATCTTTACCCTaGCAAGAAAGAGCTCTTGCC	+
Preference number: 3 (lower is better) Translates to: FLPLQLLSPCISCVLPQCHISLP*QERALA Trigger: GGCAAGAGCTCTTTCTTGCAAGGGTAAAGATATGTG...ACACTGTGGAAGCACACAGGAAATGCACGGTGAGAGTAACTGAAGAGGGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	GTTGTGGGGACCTGCATGAAGACCCAGCTACACATCTaGTACATATGTGGCACAGGATTATTTACTCTGCTT	+
Preference number: 3 (lower is better) Translates to: VVGTCMKTQLHI*YICGTGLFTLL Trigger: AAGCAGAGTAAATAATCCTGTGCCACATATGTAGCAGATGTGTAGCTGGGTCTTCATGCAGGTCCCCACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 72 bp	ACCACAGGACTTCTGCCTTTGTGCAATACTGCCACCTaGTGGTCCAACTGGAAAATGACTTTCCTAATCCTT	+
Preference number: 3 (lower is better) Translates to: TTGLLPLCNTAT*WSNWKMTFLIL Trigger: AAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 72 bp	GTTAGAGGTAGACCCAATATTCTGTGTGAGGGAAAGTaGGACACGCAGTCCAACAAGACTCAAGAACTCAAC	+
Preference number: 3 (lower is better) Translates to: VRGRPNILCEGK*DTQSNKTQELN Trigger: GTTGAGTTCTTGAGTCTTGTTGGACTGCGTGTCCCACTTTCCCTCACACAGAATATTGGGTCTACCTCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 72 bp	ACAGGACTTCTGCCTTTGTGCAATACTGCCACCTGGTaGTCCAACTGGAAAATGACTTTCCTAATCCTTCAA	+
Preference number: 3 (lower is better) Translates to: TGLLPLCNTATW*SNWKMTFLILQ Trigger: TTGAAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CAA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCGAGGTATCCCAATACTaGCTGTGTAGTGTAGACTGG	+
Preference number: 3 (lower is better) Translates to: TLPSRSAARALISQKFFFEVSQY*LCSVDW Trigger: CCAGTCTACACTACACAGCAAGTATTGGGATACCTC...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CCA 72 bp	ATGTGGCACAGGATTATTTACTCTGCTTTTGAACACTaGGGGGATTATCTGCCAGACACAACAGTCTTAAGG	+
Preference number: 3 (lower is better) Translates to: MWHRIIYSAFEH*GDYLPDTTVLR Trigger: CCTTAAGACTGTTGTGTCTGGCAGATAATCCCCCCAGTGTTCAAAAGCAGAGTAAATAATCCTGTGCCACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CCA 72 bp	CTGCATGAAGACCCAGCTACACATCTGCTACATATGTaGCACAGGATTATTTACTCTGCTTTTGAACACTGG	+
Preference number: 3 (lower is better) Translates to: LHEDPATHLLHM*HRIIYSAFEHW Trigger: CCAGTGTTCAAAAGCAGAGTAAATAATCCTGTGCCACATATGTAGCAGATGTGTAGCTGGGTCTTCATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR TCA 72 bp	CCCATGCCATCCAGGTTTCAAACATTTGTATATTTCTaGTCTACTGAGCCTAGAAGGTATACAGCCCTAGTG	+
Preference number: 3 (lower is better) Translates to: PMPSRFQTFVYF*STEPRRYTALV Trigger: CACTAGGGCTGTATACCTTCTAGGCTCAGTAGATCAGAAATATACAAATGTTTGAAACCTGGATGGCATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR GCA 72 bp	CCCCTGTGCTGGTATACAAACACATATCTTTACCCTTaGAAGAAAGAGCTCTTGCCTACTAAGCCATTTCTT	+
Preference number: 3 (lower is better) Translates to: PLCWYTNTYLYP*KKELLPTKPFL Trigger: AAGAAATGGCTTAGTAGGCAAGAGCTCTTTCTTGCAAGGGTAAAGATATGTGTTTGTATACCAGCACAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR-3UTR CAA 90 bp	CCTAGTGATGAAGTTATAATACACATTTATGAACCTGAGTTAGAGGTAGACCCAACACTTGGTGCCAAGTaGATGTGGGACAACATCTTA	+
Preference number: 3 (lower is better) Translates to: PSDEVIIHIYEPELEVDPTLGAK*MWDNIL Trigger: TAAGATGTTGTCCCACATCAACTTGGCACCAAGTGT...TGGGTCTACCTCTAACTCAGGTTCATAAATGTGTATTATAACTTCATCACTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR TCA 72 bp	TGCAGTATAGATGGAAGAAGTGTGGAAGACTCCCTATaGCCCATTGATAGCGTATATCCATTCCTAGATATA	+
Preference number: 3 (lower is better) Translates to: CSIDGRSVEDSL*PIDSVYPFLDI Trigger: TATATCTAGGAATGGATATACGCTATCAATGGGTCATAGGGAGTCTTCCACACTTCTTCCATCTATACTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CCA 72 bp	TATAGACAAAATGACCCTGAAGGCTGTATGTATTTCTaGGAGATCATCAAAGAAAAGCAGAGCAGACAGTCT	+
Preference number: 3 (lower is better) Translates to: YRQNDPEGCMYF*EIIKEKQSRQS Trigger: AGACTGTCTGCTCTGCTTTTCTTTGATGATCTCCCAGAAATACATACAGCCTTCAGGGTCATTTTGTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CCA 90 bp	GCTACAGGCCTCCACGCAGTGGAGCCAGCTGACCATGGCCTGACATTGCTCAAATTTCCTTTCCAGTGCTaGGTGGCTCAGCAGCTGCGG	+
Preference number: 4 (lower is better) Translates to: ATGLHAVEPADHGLTLLKFPFQC*VAQQLR Trigger: CCGCAGCTGCTGAGCCACCCAGCACTGGAAAGGAAA...TTTGAGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	AGCTACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTGGAGTATGTCCCTGAGAAGAGCTGCTGCTTaGTCTGCGCCTGCGTCTTCT	+
Preference number: 4 (lower is better) Translates to: SYQEVGDRLEAGGWSMSLRRAAA*SAPASS Trigger: AGAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCT...CAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	GCCCATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCGCGTGGACGAGGCCTTaGCCTGGACCTTCTGGTTCT	+
Preference number: 4 (lower is better) Translates to: AHSSSLWHVWYGLQRCPRAWTRP*PGPSGS Trigger: AGAACCAGAAGGTCCAGGTCAAGGCCTCGTCCACGC...GCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	TCCCTCCTAAGCCTCCAAAGGCCTAGGGTTAGAGGACTGAGTCCACACTTGACATGCGGATGCTGGTCCTaGTGCCGCAGTCACATGCTG	+
Preference number: 4 (lower is better) Translates to: SLLSLQRPRVRGLSPHLTCGCWS*CRSHML Trigger: CAGCATGTGACTGCGGCATCAGGACCAGCATCCGCA...TGTCAAGTGTGGACTCAGTCCTCTAACCCTAGGCCTTTGGAGGCTTAGGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	TTTGCTTCCCGACAGGCATTAGTGAGTGGCTTTCCTGGGACGTGGCCTCTTGCATTTCCTTTCCAGTGCTaGGTGGCTCAGCAGCTGCGG	+
Preference number: 4 (lower is better) Translates to: FASRQALVSGFPGTWPLAFPFQC*VAQQLR Trigger: CCGCAGCTGCTGAGCCACCCAGCACTGGAAAGGAAA...TGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TCAGCACAGGACCACAGGACTTCTGCCTTTGTGCAATACTGCCACCTGGTGGTCTGCTGTCTGAAGAGCTaGTTGAAGACGAGCGCCTCC	+
Preference number: 4 (lower is better) Translates to: SAQDHRTSAFVQYCHLVVCCLKS*LKTSAS Trigger: GGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCA...GACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR GCA 90 bp	TCCCTCCTAAGCCTCCAAAGGCCTAGGGTTAGAGGACTGAGTCCACACTTGACAGGCCCCTGGAACGACTaGGACTTCTTTTCCTTCTGG	+
Preference number: 4 (lower is better) Translates to: SLLSLQRPRVRGLSPHLTGPWND*DFFSFW Trigger: CCAGAAGGAAAAGAAGTCGCAGTCGTTCCAGGGGCC...TGTCAAGTGTGGACTCAGTCCTCTAACCCTAGGCCTTTGGAGGCTTAGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	GCTACAGGCCTCCACGCAGTGGAGCCAGCTGACCATGGCCTGACATTGCTCAAATCTGGTTCTGCTTTTTaGCCGAGACCTTTGAACTCT	+
Preference number: 4 (lower is better) Translates to: ATGLHAVEPADHGLTLLKSGSAF*PRPLNS Trigger: AGAGTTCAAAGGTCTCGGTCAAAAAGCAGAACCAGA...TTTGAGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	ACTTTATCAATGGACTGCACCATGCACTTAGAGCTGAGTGAGCTACCAGGAGGTTGCGGATGCTGGTCCTaGTGCCGCAGTCACATGCTG	+
Preference number: 4 (lower is better) Translates to: TLSMDCTMHLELSELPGGCGCWS*CRSHML Trigger: CAGCATGTGACTGCGGCATCAGGACCAGCATCCGCA...ACCTCCTGGTAGCTCACTCAGCTCTAAGTGCATGGTGCAGTCCATTGATAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TCCCTCCTAAGCCTCCAAAGGCCTAGGGTTAGAGGACTGAGTCCACACTTGACATGCGGCTGTATGTCCTaGTGTCTGAAGAGCTGCTTG	+
Preference number: 4 (lower is better) Translates to: SLLSLQRPRVRGLSPHLTCGCMS*CLKSCL Trigger: CAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCA...TGTCAAGTGTGGACTCAGTCCTCTAACCCTAGGCCTTTGGAGGCTTAGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TCCCTCCTAAGCCTCCAAAGGCCTAGGGTTAGAGGACTGAGTCCACACTTGACACATAAGAAGAGCTGCTaGTTGATCTGCGCCTGCGTC	+
Preference number: 4 (lower is better) Translates to: SLLSLQRPRVRGLSPHLTHKKSC*LICACV Trigger: GACGCAGGCGCAGATCAAGCAGCAGCTCTTCTTATG...TGTCAAGTGTGGACTCAGTCCTCTAACCCTAGGCCTTTGGAGGCTTAGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	GCTACAGGCCTCCACGCAGTGGAGCCAGCTGACCATGGCCTGACATTGCTCAAATGCTTCATCAGCTTTTaGAGCAGCTTCAAGGACCAA	+
Preference number: 4 (lower is better) Translates to: ATGLHAVEPADHGLTLLKCFISF*SSFKDQ Trigger: TTGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCA...TTTGAGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	GCTACAGGCCTCCACGCAGTGGAGCCAGCTGACCATGGCCTGACATTGCTCAAAGACTTCTTTTCCTTCTaGAGCCATAAGAAGAGCTGC	+
Preference number: 4 (lower is better) Translates to: ATGLHAVEPADHGLTLLKDFFSF*SHKKSC Trigger: GCAGCTCTTCTTATGGCTCCAGAAGGAAAAGAAGTC...TTTGAGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	GCTACAGGCCTCCACGCAGTGGAGCCAGCTGACCATGGCCTGACATTGCTCAAAGAGCGATTAATCTCTTaGACCACTTTTCTTCAGCCT	+
Preference number: 4 (lower is better) Translates to: ATGLHAVEPADHGLTLLKERLIS*TTFLQP Trigger: AGGCTGAAGAAAAGTGGTTCAAGAGATTAATCGCTC...TTTGAGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGAGCCATAAGAAGAGCTaGTGCTTGATCTGCGCCTGC	+
Preference number: 4 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLSHKKS*CLICAC Trigger: GCAGGCGCAGATCAAGCAGCAGCTCTTCTTATGGCT...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TTTCTCCCTCTTCAGTTACTCTCACCGTGCATTTCCTGTGTGCTTCCACAGTGTGGCCCCTGGAACGACTaGGACTTCTTTTCCTTCTGG	+
Preference number: 4 (lower is better) Translates to: FLPLQLLSPCISCVLPQCGPWND*DFFSFW Trigger: CCAGAAGGAAAAGAAGTCGCAGTCGTTCCAGGGGCC...ACACTGTGGAAGCACACAGGAAATGCACGGTGAGAGTAACTGAAGAGGGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CCA 90 bp	ATCATGACACTGGGTCAGGCACATAGTCTAGCATGGGCATTAAGGTCTGGCTATGGACCAATTGCAGTCTaGCTTTGGCCTGCTCAGCTG	+
Preference number: 4 (lower is better) Translates to: IMTLGQAHSLAWALRSGYGPIAV*LWPAQL Trigger: CAGCTGAGCAGGCCAAAGCCAGACTGCAATTGGTCC...ATAGCCAGACCTTAATGCCCATGCTAGACTATGTGCCTGACCCAGTGTCATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCCTTTCCAGTGCTGGGTaGCTCAGCAGCTGCGGATGC	+
Preference number: 4 (lower is better) Translates to: ASFILGMFICRAKENSLCLSSAG*LSSCGC Trigger: GCATCCGCAGCTGCTGAGCCACCCAGCACTGGAAAG...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	CTGAGTCCACACTTGACACAAAACATGTTGCCCTCAAATCTAACATGGGCATTGCTTTCCAGTGCTGGGTaGCTCAGCAGCTGCGGATGC	+
Preference number: 4 (lower is better) Translates to: LSPHLTQNMLPSNLTWALLSSAG*LSSCGC Trigger: GCATCCGCAGCTGCTGAGCCACCCAGCACTGGAAAG...CAATGCCCATGTTAGATTTGAGGGCAACATGTTTTGTGTCAAGTGTGGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
3UTR CAA 72 bp	GAAACATCTCAGCACAGGACCACAGGACTTCTGCCTTaGTGCAATACTGCCACCTGGTGGTCCAACTGGAAA	+
Preference number: 4 (lower is better) Translates to: ETSQHRTTGLLP*CNTATWWSNWK Trigger: TTTCCAGTTGGACCACCAGGTGGCAGTATTGCACAAAGGCAGAAGTCCTGTGGTCCTGTGCTGAGATGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR TCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCGCGTGGACGAGGCCTTaGCCTGGACCTTCTGGTTCT	+
Preference number: 4 (lower is better) Translates to: TLPSRSAARALISQKFFFAWTRP*PGPSGS Trigger: AGAACCAGAAGGTCCAGGTCAAGGCCTCGTCCACGC...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	TTTGCTTCCCGACAGGCATTAGTGAGTGGCTTTCCTGGGACGTGGCCTCTTGCAGAGCGATTAATCTCTTaGACCACTTTTCTTCAGCCT	+
Preference number: 4 (lower is better) Translates to: FASRQALVSGFPGTWPLAERLIS*TTFLQP Trigger: AGGCTGAAGAAAAGTGGTTCAAGAGATTAATCGCTC...TGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	GCCCATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTGCTTGATCTGCGCCTaGGTCTTCTCTCATAAGAAT	+
Preference number: 4 (lower is better) Translates to: AHSSSLWHVWYGLQRCPRCLICA*VFSHKN Trigger: ATTCTTATGAGAGAAGACGCAGGCGCAGATCAAGCA...GCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCCTTTCCAGTGCTGGGTaGCTCAGCAGCTGCGGATGC	+
Preference number: 4 (lower is better) Translates to: TLPSRSAARALISQKFFFLSSAG*LSSCGC Trigger: GCATCCGCAGCTGCTGAGCCACCCAGCACTGGAAAG...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	GTGCAATACTGCCACCTGGTGGTCCAACTGGAAAATGACTTTCCTAATCCTTCATGCGGCTGTATGTCCTaGTGTCTGAAGAGCTGCTTG	+
Preference number: 4 (lower is better) Translates to: VQYCHLVVQLENDFPNPSCGCMS*CLKSCL Trigger: CAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCA...TGAAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR GCA 90 bp	AAATTTGGCTCAACCATAGAAACATCTCAGCACAGGACCACAGGACTTCTGCCTAGCCATAAGAAGAGCTaGTGCTTGATCTGCGCCTGC	+
Preference number: 4 (lower is better) Translates to: KFGSTIETSQHRTTGLLPSHKKS*CLICAC Trigger: GCAGGCGCAGATCAAGCAGCAGCTCTTCTTATGGCT...AGGCAGAAGTCCTGTGGTCCTGTGCTGAGATGTTTCTATGGTTGAGCCAAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCTTTCCTTTCCAGTGCTaGGTGGCTCAGCAGCTGCGG	+
Preference number: 4 (lower is better) Translates to: TLPSRSAARALISQKFFFFPFQC*VAQQLR Trigger: CCGCAGCTGCTGAGCCACCCAGCACTGGAAAGGAAA...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGGACGAGGCCTTGACCTaGACCTTCTCTCATAAGAAT	+
Preference number: 4 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLDEALT*TFSHKN Trigger: ATTCTTATGAGAGAAGGTCCAGGTCAAGGCCTCGTC...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046542.13
CDS-3UTR TCA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTAGAAGAGCTGCTGCTTaGTCTGCGCCTGCGTCTTCT	+
Preference number: 4 (lower is better) Translates to: SVRSCHFSSLTEKRTSVARRAAA*SAPASS Trigger: AGAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCT...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCTGCTGTCTGAAGAGCTaGTTGAAGACGAGCGCCTCC	+
Preference number: 4 (lower is better) Translates to: TLPSRSAARALISQKFFFCCLKS*LKTSAS Trigger: GGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCA...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGTGGACCTTCTGGTTCTaGTTTTTGACCGAGACCTTT	+
Preference number: 4 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLWTFWF*FLTETF Trigger: AAAGGTCTCGGTCAAAAAGCAGAACCAGAAGGTCCA...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGGACTTCTTTTCCTTCTaGAGCCATAAGAAGAGCTGC	+
Preference number: 4 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLDFFSF*SHKKSC Trigger: GCAGCTCTTCTTATGGCTCCAGAAGGAAAAGAAGTC...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	CACATCTGCTACATATGTGGCACAGGATTATTTACTCTGCTTTTGAACACTGGGGGACCAATTGCAGTCTaGCTTTGGCCTGCTCAGCTG	+
Preference number: 4 (lower is better) Translates to: HICYICGTGLFTLLLNTGGPIAV*LWPAQL Trigger: CAGCTGAGCAGGCCAAAGCCAGACTGCAATTGGTCC...CCCAGTGTTCAAAAGCAGAGTAAATAATCCTGTGCCACATATGTAGCAGATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR GCA 90 bp	TTTCTCCCTCTTCAGTTACTCTCACCGTGCATTTCCTGTGTGCTTCCACAGTGTTGCTTGATCTGCGCCTaGGTCTTCTCTCATAAGAAT	+
Preference number: 4 (lower is better) Translates to: FLPLQLLSPCISCVLPQCCLICA*VFSHKN Trigger: ATTCTTATGAGAGAAGACGCAGGCGCAGATCAAGCA...ACACTGTGGAAGCACACAGGAAATGCACGGTGAGAGTAACTGAAGAGGGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR GCA 90 bp	TACTGCCACCTGGTGGTCCAACTGGAAAATGACTTTCCTAATCCTTCAATTAACCATAAGAAGAGCTGCTaGTTGATCTGCGCCTGCGTC	+
Preference number: 4 (lower is better) Translates to: YCHLVVQLENDFPNPSINHKKSC*LICACV Trigger: GACGCAGGCGCAGATCAAGCAGCAGCTCTTCTTATG...GTTAATTGAAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR GCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCCATAAGAAGAGCTGCTaGTTGATCTGCGCCTGCGTC	+
Preference number: 4 (lower is better) Translates to: TLPSRSAARALISQKFFFHKKSC*LICACV Trigger: GACGCAGGCGCAGATCAAGCAGCAGCTCTTCTTATG...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	ATCATGACACTGGGTCAGGCACATAGTCTAGCATGGGCATTAAGGTCTGGCTATGACTGGATCTTTCACTaGTTCTACTATGTGAGCGTG	+
Preference number: 4 (lower is better) Translates to: IMTLGQAHSLAWALRSGYDWIFH*FYYVSV Trigger: CACGCTCACATAGTAGAAGCAGTGAAAGATCCAGTC...ATAGCCAGACCTTAATGCCCATGCTAGACTATGTGCCTGACCCAGTGTCATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACAGCCATAAGAAGAGCTaGTGCTTGATCTGCGCCTGC	+
Preference number: 4 (lower is better) Translates to: YGLQRCPRLSIRECHSTHSHKKS*CLICAC Trigger: GCAGGCGCAGATCAAGCAGCAGCTCTTCTTATGGCT...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	GAGATTAATCCCTTCCGAAATCCCTACTGCATAGCCGTGTTCACATTAACAACCCCGCGTTTGATGCTGTaGACTTCTTTGTCTTTGCCT	+
Preference number: 4 (lower is better) Translates to: EINPFRNPYCIAVFTLTTPRLML*TSLSLP Trigger: AGGCAAAGACAAAGAAGTGCACAGCATCAAACGCGG...GGTTGTTAATGTGAACACGGCTATGCAGTAGGGATTTCGGAAGGGATTAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR TCA 90 bp	CCTAGTGATGAAGTTATAATACACATTTATGAACCTGAGTTAGAGGTAGACCCAAGAAGAGCTGCTGCTTaGTCTGCGCCTGCGTCTTCT	+
Preference number: 4 (lower is better) Translates to: PSDEVIIHIYEPELEVDPRRAAA*SAPASS Trigger: AGAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCT...TGGGTCTACCTCTAACTCAGGTTCATAAATGTGTATTATAACTTCATCACTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR GCA 90 bp	CTGAGTCCACACTTGACACAAAACATGTTGCCCTCAAATCTAACATGGGCATTGGACTGGATCTTTCACTaGTTCTACTATGTGAGCGTG	+
Preference number: 4 (lower is better) Translates to: LSPHLTQNMLPSNLTWALDWIFH*FYYVSV Trigger: CACGCTCACATAGTAGAAGCAGTGAAAGATCCAGTC...CAATGCCCATGTTAGATTTGAGGGCAACATGTTTTGTGTCAAGTGTGGACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTCCGCGTTTGATGCTGTaGACTTCTTTGTCTTTGCCT	+
Preference number: 4 (lower is better) Translates to: SVRSCHFSSLTEKRTSVAPRLML*TSLSLP Trigger: AGGCAAAGACAAAGAAGTGCACAGCATCAAACGCGG...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	ACACTGCCTAGCAGGAGTGCTGCAAGAGCTCTTATTTCTCAGAAATTCTTTTTCCCGCGTTTGATGCTGTaGACTTCTTTGTCTTTGCCT	+
Preference number: 4 (lower is better) Translates to: TLPSRSAARALISQKFFFPRLML*TSLSLP Trigger: AGGCAAAGACAAAGAAGTGCACAGCATCAAACGCGG...GAAAAAGAATTTCTGAGAAATAAGAGCTCTTGCAGCACTCCTGCTAGGCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TTTATGATACCTAAAAACCTTAAGAAAGGGGAGCTAAGGGATTCAAGAAGGGTTTGCGGCTGTATGTCCTaGTGTCTGAAGAGCTGCTTG	+
Preference number: 4 (lower is better) Translates to: FMIPKNLKKGELRDSRRVCGCMS*CLKSCL Trigger: CAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCA...AACCCTTCTTGAATCCCTTAGCTCCCCTTTCTTAAGGTTTTTAGGTATCATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	GCATTGCTTAGACTTCTTAGCGGACCTTTTATGATACCTAAAAACCTTAAGAAAGGCCCCTGGAACGACTaGGACTTCTTTTCCTTCTGG	+
Preference number: 4 (lower is better) Translates to: ALLRLLSGPFMIPKNLKKGPWND*DFFSFW Trigger: CCAGAAGGAAAAGAAGTCGCAGTCGTTCCAGGGGCC...TTTCTTAAGGTTTTTAGGTATCATAAAAGGTCCGCTAAGAAGTCTAAGCAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTTGCTTCATCAGCTTTTaGAGCAGCTTCAAGGACCAA	+
Preference number: 4 (lower is better) Translates to: SVRSCHFSSLTEKRTSVACFISF*SSFKDQ Trigger: TTGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCA...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CCA 90 bp	CATCACCCCTCCCATGCCATCCAGGTTTCAAACATTTGTATATTTCTGATCTACGACTTCTTTTCCTTCTaGAGCCATAAGAAGAGCTGC	+
Preference number: 4 (lower is better) Translates to: HHPSHAIQVSNICIFLIYDFFSF*SHKKSC Trigger: GCAGCTCTTCTTATGGCTCCAGAAGGAAAAGAAGTC...GTAGATCAGAAATATACAAATGTTTGAAACCTGGATGGCATGGGAGGGGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CAA 72 bp	TGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTaGTCTATTAGAGAATGTCATTCTACACACGACACA	+
Preference number: 4 (lower is better) Translates to: WHVWYGLQRCPR*SIRECHSTHDT Trigger: TGTGTCGTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACTGGACCTTCTGGTTCTaGTTTTTGACCGAGACCTTT	+
Preference number: 4 (lower is better) Translates to: YGLQRCPRLSIRECHSTHWTFWF*FLTETF Trigger: AAAGGTCTCGGTCAAAAAGCAGAACCAGAAGGTCCA...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACGACTGGATCTTTCACTaGTTCTACTATGTGAGCGTG	+
Preference number: 4 (lower is better) Translates to: YGLQRCPRLSIRECHSTHDWIFH*FYYVSV Trigger: CACGCTCACATAGTAGAAGCAGTGAAAGATCCAGTC...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	CACATCTGCTACATATGTGGCACAGGATTATTTACTCTGCTTTTGAACACTGGGAATCCCTTCTGGTTCTaGTTTTTGACCGAGACCTTT	+
Preference number: 4 (lower is better) Translates to: HICYICGTGLFTLLLNTGNPFWF*FLTETF Trigger: AAAGGTCTCGGTCAAAAAGCAGAACCAGAAGGGATT...CCCAGTGTTCAAAAGCAGAGTAAATAATCCTGTGCCACATATGTAGCAGATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CAA 72 bp	ACATCACCCCTCCCATGCCATCCAGGTTTCAAACATTaGTATATTTCTGATCTACTGAGCCTAGAAGGTATA	+
Preference number: 4 (lower is better) Translates to: TSPLPCHPGFKH*YISDLLSLEGI Trigger: TATACCTTCTAGGCTCAGTAGATCAGAAATATACAAATGTTTGAAACCTGGATGGCATGGGAGGGGTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR TCA 90 bp	CCTAGTGATGAAGTTATAATACACATTTATGAACCTGAGTTAGAGGTAGACCCATCTGGTTCTGCTTTTTaGCCGAGACCTTTGAACTCT	+
Preference number: 4 (lower is better) Translates to: PSDEVIIHIYEPELEVDPSGSAF*PRPLNS Trigger: AGAGTTCAAAGGTCTCGGTCAAAAAGCAGAACCAGA...TGGGTCTACCTCTAACTCAGGTTCATAAATGTGTATTATAACTTCATCACTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR GCA 90 bp	TTTATGATACCTAAAAACCTTAAGAAAGGGGAGCTAAGGGATTCAAGAAGGGTTTGCTTCATCAGCTTTTaGAGCAGCTTCAAGGACCAA	+
Preference number: 4 (lower is better) Translates to: FMIPKNLKKGELRDSRRVCFISF*SSFKDQ Trigger: TTGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCA...AACCCTTCTTGAATCCCTTAGCTCCCCTTTCTTAAGGTTTTTAGGTATCATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	CCTAGTGATGAAGTTATAATACACATTTATGAACCTGAGTTAGAGGTAGACCCATGCTTCATCAGCTTTTaGAGCAGCTTCAAGGACCAA	+
Preference number: 4 (lower is better) Translates to: PSDEVIIHIYEPELEVDPCFISF*SSFKDQ Trigger: TTGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCA...TGGGTCTACCTCTAACTCAGGTTCATAAATGTGTATTATAACTTCATCACTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
3UTR CAA 72 bp	ACACAAAACATGTTGCCCTCAAATCTAACATGGGCATaGCTTAGACTTCTTAGCGGACCTTTTATGATACCT	+
Preference number: 4 (lower is better) Translates to: TQNMLPSNLTWA*LRLLSGPFMIP Trigger: AGGTATCATAAAAGGTCCGCTAAGAAGTCTAAGCAATGCCCATGTTAGATTTGAGGGCAACATGTTTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR GCA 90 bp	GCATTGCTTAGACTTCTTAGCGGACCTTTTATGATACCTAAAAACCTTAAGAAATGCTTGATCTGCGCCTaGGTCTTCTCTCATAAGAAT	+
Preference number: 4 (lower is better) Translates to: ALLRLLSGPFMIPKNLKKCLICA*VFSHKN Trigger: ATTCTTATGAGAGAAGACGCAGGCGCAGATCAAGCA...TTTCTTAAGGTTTTTAGGTATCATAAAAGGTCCGCTAAGAAGTCTAAGCAATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS GCA 90 bp	AGTCGGACCTCGGCCTCCTCCCGCCCTTCTTGCGGCTGTATGTCCTaGTGTCTGAAGAGCTGCTTGAAGACGAGCGCCTCCGGTGTTTCT	+
Preference number: 5 (lower is better) Translates to: SRTSASSRPSCGCMS*CLKSCLKTSASGVS Trigger: AGAAACACCGGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGAGGAGGCCGAGGTCCGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS-3UTR CAA 90 bp	GGGCAACGGAATCCACAGCAGGCAACAGAGTCAGGGGTAGCCCTGGCTGCAGTTAATTGCAGTCTGGCTTaGGCCTGCTCAGCTGGAGGC	+
Preference number: 5 (lower is better) Translates to: GQRNPQQATESGVALAAVNCSLA*ACSAGG Trigger: GCCTCCAGCTGAGCAGGCCAAAGCCAGACTGCAATT...AACTGCAGCCAGGGCTACCCCTGACTCTGTTGCCTGCTGTGGATTCCGTTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CAA 90 bp	AGCTACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTGGAGTATGTCCCTGAGCGTGGACGAGGCCTaGACCTGGACCTTCTGGTTC	+
Preference number: 5 (lower is better) Translates to: SYQEVGDRLEAGGWSMSLSVDEA*TWTFWF Trigger: GAACCAGAAGGTCCAGGTCAAGGCCTCGTCCACGCT...CAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	CCCCGCCCGTACCAACCCACACTGGCACACCAAGTCACTGCACACTGCAGGACTATGCTTCATCAGCTTTaGCAGCAGCTTCAAGGACCA	+
Preference number: 5 (lower is better) Translates to: PRPYQPTLAHQVTAHCRTMLHQL*QQLQGP Trigger: TGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCAT...AGTCCTGCAGTGTGCAGTGACTTGGTGTGCCAGTGTGGGTTGGTACGGGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS GCA 90 bp	TCCTCCCGCCCTTCTTGCGGCTGTATGTCCTGCTGTCTGAAGAGCTaGTTGAAGACGAGCGCCTCCGGTGTTTCTTTTTCCTCTTGCTTC	+
Preference number: 5 (lower is better) Translates to: SSRPSCGCMSCCLKS*LKTSASGVSFSSCF Trigger: GAAGCAAGAGGAAAAAGAAACACCGGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS GCA 90 bp	GAGACCTTTGAACTCTATAGGGTTTCCCTCGGCCCCTGGAACGACTaGGACTTCTTTTCCTTCTGGAGCCATAAGAAGAGCTGCTGCTTG	+
Preference number: 5 (lower is better) Translates to: ETFELYRVSLGPWND*DFFSFWSHKKSCCL Trigger: CAAGCAGCAGCTCTTCTTATGGCTCCAGAAGGAAAAGAAGTCGCAGTCGTTCCAGGGGCCGAGGGAAACCCTATAGAGTTCAAAGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162693.8
CDS-3UTR CAA 90 bp	ACTTTATCAATGGACTGCACCATGCACTTAGAGCTGAGTGAGCTACCAGGAGGTAATTGCAGTCTGGCTTaGGCCTGCTCAGCTGGAGGC	+
Preference number: 5 (lower is better) Translates to: TLSMDCTMHLELSELPGGNCSLA*ACSAGG Trigger: GCCTCCAGCTGAGCAGGCCAAAGCCAGACTGCAATT...ACCTCCTGGTAGCTCACTCAGCTCTAAGTGCATGGTGCAGTCCATTGATAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GCTACAGGCCTCCACGCAGTGGAGCCAGCTGACCATGGCCTGACATTGCTCAAAAGAGCGATTAATCTCTaGAACCACTTTTCTTCAGCC	+
Preference number: 5 (lower is better) Translates to: ATGLHAVEPADHGLTLLKRAINL*NHFSSA Trigger: GGCTGAAGAAAAGTGGTTCAAGAGATTAATCGCTCT...TTTGAGCAATGTCAGGCCATGGTCAGCTGGCTCCACTGCGTGGAGGCCTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	TTTGCTTCCCGACAGGCATTAGTGAGTGGCTTTCCTGGGACGTGGCCTCTTGCATTCTACCAGGGTGGCTaGGTCTTCTTCTTTTCTTCT	+
Preference number: 5 (lower is better) Translates to: FASRQALVSGFPGTWPLAFYQGG*VFFFSS Trigger: AGAAGAAAAGAAGAAGACCAAGCCACCCTGGTAGAA...TGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	AGCTACCAGGAGGTAGGGGACAGACTAGAAGCAGGTGGCTGGAGTATGTCCCTGGGTTCTACTGCCTTTTaGACGTCTTTACTTGATCTG	+
Preference number: 5 (lower is better) Translates to: SYQEVGDRLEAGGWSMSLGSTAF*TSLLDL Trigger: CAGATCAAGTAAAGACGTCAAAAAGGCAGTAGAACC...CAGGGACATACTCCAGCCACCTGCTTCTAGTCTGTCCCCTACCTCCTGGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GTGCAATACTGCCACCTGGTGGTCCAACTGGAAAATGACTTTCCTAATCCTTCAAAGAAGAGCTGCTGCTaGATCTGCGCCTGCGTCTTC	+
Preference number: 5 (lower is better) Translates to: VQYCHLVVQLENDFPNPSKKSCC*ICACVF Trigger: GAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCTT...TGAAGGATTAGGAAAGTCATTTTCCAGTTGGACCACCAGGTGGCAGTATTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CAA 90 bp	TTTGCTTCCCGACAGGCATTAGTGAGTGGCTTTCCTGGGACGTGGCCTCTTGCATTTTCTCTTTTCTCTTaGTCCCGGACTTTACGTCTG	+
Preference number: 5 (lower is better) Translates to: FASRQALVSGFPGTWPLAFSLFS*SRTLRL Trigger: CAGACGTAAAGTCCGGGACAAAGAGAAAAGAGAAAA...TGCAAGAGGCCACGTCCCAGGAAAGCCACTCACTAATGCCTGTCGGGAAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	CTGAGTCCACACTTGACACAAAACATGTTGCCCTCAAATCTAACATGGGCATTGAATTGCAGTCTGGCTTaGGCCTGCTCAGCTGGAGGC	+
Preference number: 5 (lower is better) Translates to: LSPHLTQNMLPSNLTWALNCSLA*ACSAGG Trigger: GCCTCCAGCTGAGCAGGCCAAAGCCAGACTGCAATT...CAATGCCCATGTTAGATTTGAGGGCAACATGTTTTGTGTCAAGTGTGGACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCAATTGCAGTCTGGCTTaGGCCTGCTCAGCTGGAGGC	+
Preference number: 5 (lower is better) Translates to: ASFILGMFICRAKENSLCNCSLA*ACSAGG Trigger: GCCTCCAGCTGAGCAGGCCAAAGCCAGACTGCAATT...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GAGATTAATCCCTTCCGAAATCCCTACTGCATAGCCGTGTTCACATTAACAACCAAGAAGAGCTGCTGCTaGATCTGCGCCTGCGTCTTC	+
Preference number: 5 (lower is better) Translates to: EINPFRNPYCIAVFTLTTKKSCC*ICACVF Trigger: GAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCTT...GGTTGTTAATGTGAACACGGCTATGCAGTAGGGATTTCGGAAGGGATTAATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCAAGAAGAGCTGCTGCTaGATCTGCGCCTGCGTCTTC	+
Preference number: 5 (lower is better) Translates to: ASFILGMFICRAKENSLCKKSCC*ICACVF Trigger: GAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCTT...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	ATCATGACACTGGGTCAGGCACATAGTCTAGCATGGGCATTAAGGTCTGGCTATATGCTTCATCAGCTTTaGCAGCAGCTTCAAGGACCA	+
Preference number: 5 (lower is better) Translates to: IMTLGQAHSLAWALRSGYMLHQL*QQLQGP Trigger: TGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCAT...ATAGCCAGACCTTAATGCCCATGCTAGACTATGTGCCTGACCCAGTGTCATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	TTTATGATACCTAAAAACCTTAAGAAAGGGGAGCTAAGGGATTCAAGAAGGGTTAGCGTGGACGAGGCCTaGACCTGGACCTTCTGGTTC	+
Preference number: 5 (lower is better) Translates to: FMIPKNLKKGELRDSRRVSVDEA*TWTFWF Trigger: GAACCAGAAGGTCCAGGTCAAGGCCTCGTCCACGCT...AACCCTTCTTGAATCCCTTAGCTCCCCTTTCTTAAGGTTTTTAGGTATCATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	ATCATGACACTGGGTCAGGCACATAGTCTAGCATGGGCATTAAGGTCTGGCTATTTCTACCAGGGTGGCTaGGTCTTCTTCTTTTCTTCT	+
Preference number: 5 (lower is better) Translates to: IMTLGQAHSLAWALRSGYFYQGG*VFFFSS Trigger: AGAAGAAAAGAAGAAGACCAAGCCACCCTGGTAGAA...ATAGCCAGACCTTAATGCCCATGCTAGACTATGTGCCTGACCCAGTGTCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	CATAGCTCTTCCCTCTGGCATGTTTGGTATGGACTTCAGAGATGTCCACGCTTGAGAGCGATTAATCTCTaGAACCACTTTTCTTCAGCC	+
Preference number: 5 (lower is better) Translates to: HSSSLWHVWYGLQRCPRLRAINL*NHFSSA Trigger: GGCTGAAGAAAAGTGGTTCAAGAGATTAATCGCTCT...CAAGCGTGGACATCTCTGAAGTCCATACCAAACATGCCAGAGGGAAGAGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCATGCTTCATCAGCTTTaGCAGCAGCTTCAAGGACCA	+
Preference number: 5 (lower is better) Translates to: ASFILGMFICRAKENSLCMLHQL*QQLQGP Trigger: TGGTCCTTGAAGCTGCTGCAAAAGCTGATGAAGCAT...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	ACTTTATCAATGGACTGCACCATGCACTTAGAGCTGAGTGAGCTACCAGGAGGTTCCTCACTCCTTTCTTaGGCTTTTAATGCTTCATCA	+
Preference number: 5 (lower is better) Translates to: TLSMDCTMHLELSELPGGSSLLS*AFNASS Trigger: TGATGAAGCATTAAAAGCCAAAGAAAGGAGTGAGGA...ACCTCCTGGTAGCTCACTCAGCTCTAAGTGCATGGTGCAGTCCATTGATAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	CCCCTCCCATGCCATCCAGGTTTCAAACATTTGTATATTTCTGATCTACTGAGCCTTCCCAGGACCTTTTaGACGTCTTTACTTGATCTG	+
Preference number: 5 (lower is better) Translates to: PLPCHPGFKHLYISDLLSLPRTF*TSLLDL Trigger: CAGATCAAGTAAAGACGTCAAAAAGGTCCTGGGAAG...GCTCAGTAGATCAGAAATATACAAATGTTTGAAACCTGGATGGCATGGGAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CAA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCTTTTCTCTTTTCTCTTaGTCCCGGACTTTACGTCTG	+
Preference number: 5 (lower is better) Translates to: ASFILGMFICRAKENSLCFSLFS*SRTLRL Trigger: CAGACGTAAAGTCCGGGACAAAGAGAAAAGAGAAAA...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	CACATCTGCTACATATGTGGCACAGGATTATTTACTCTGCTTTTGAACACTGGGTTCTACCAGGGTGGCTaGGTCTTCTTCTTTTCTTCT	+
Preference number: 5 (lower is better) Translates to: HICYICGTGLFTLLLNTGFYQGG*VFFFSS Trigger: AGAAGAAAAGAAGAAGACCAAGCCACCCTGGTAGAA...CCCAGTGTTCAAAAGCAGAGTAAATAATCCTGTGCCACATATGTAGCAGATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CAA 90 bp	GAGATTAATCCCTTCCGAAATCCCTACTGCATAGCCGTGTTCACATTAACAACCGGTTCTACTGCCTTTTaGACGTCTTTACTTGATCTG	+
Preference number: 5 (lower is better) Translates to: EINPFRNPYCIAVFTLTTGSTAF*TSLLDL Trigger: CAGATCAAGTAAAGACGTCAAAAAGGCAGTAGAACC...GGTTGTTAATGTGAACACGGCTATGCAGTAGGGATTTCGGAAGGGATTAATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTTTTTCTCTTTTCTCTTaGTCCCGGACTTTACGTCTG	+
Preference number: 5 (lower is better) Translates to: SVRSCHFSSLTEKRTSVAFSLFS*SRTLRL Trigger: CAGACGTAAAGTCCGGGACAAAGAGAAAAGAGAAAA...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCTGCACTTCTTTGTCTTaGCCTTTATCCTTCTCCTTT	+
Preference number: 5 (lower is better) Translates to: ASFILGMFICRAKENSLCCTSLS*PLSFSF Trigger: AAAGGAGAAGGATAAAGGCAAAGACAAAGAAGTGCA...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	CTGAGTCCACACTTGACACAAAACATGTTGCCCTCAAATCTAACATGGGCATTGTGCACTTCTTTGTCTTaGCCTTTATCCTTCTCCTTT	+
Preference number: 5 (lower is better) Translates to: LSPHLTQNMLPSNLTWALCTSLS*PLSFSF Trigger: AAAGGAGAAGGATAAAGGCAAAGACAAAGAAGTGCA...CAATGCCCATGTTAGATTTGAGGGCAACATGTTTTGTGTCAAGTGTGGACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GCCTCCTTCATTCTCGGCATGTTTATTTGTAGAGCCAAGGAAAATAGCCTTTGCTCCTCACTCCTTTCTTaGGCTTTTAATGCTTCATCA	+
Preference number: 5 (lower is better) Translates to: ASFILGMFICRAKENSLCSSLLS*AFNASS Trigger: TGATGAAGCATTAAAAGCCAAAGAAAGGAGTGAGGA...GCAAAGGCTATTTTCCTTGGCTCTACAAATAAACATGCCGAGAATGAAGGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACTTCTACCAGGGTGGCTaGGTCTTCTTCTTTTCTTCT	+
Preference number: 5 (lower is better) Translates to: YGLQRCPRLSIRECHSTHFYQGG*VFFFSS Trigger: AGAAGAAAAGAAGAAGACCAAGCCACCCTGGTAGAA...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	CACATCTGCTACATATGTGGCACAGGATTATTTACTCTGCTTTTGAACACTGGGTCCTCACTCCTTTCTTaGGCTTTTAATGCTTCATCA	+
Preference number: 5 (lower is better) Translates to: HICYICGTGLFTLLLNTGSSLLS*AFNASS Trigger: TGATGAAGCATTAAAAGCCAAAGAAAGGAGTGAGGA...CCCAGTGTTCAAAAGCAGAGTAAATAATCCTGTGCCACATATGTAGCAGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065047.13
CDS-3UTR CAA 90 bp	AGTGTAAGGTCCTGCCACTTTTCATCCTTAACAGAGAAGAGAACTTCAGTAGCTTCCTCACTCCTTTCTTaGGCTTTTAATGCTTCATCA	+
Preference number: 5 (lower is better) Translates to: SVRSCHFSSLTEKRTSVASSLLS*AFNASS Trigger: TGATGAAGCATTAAAAGCCAAAGAAAGGAGTGAGGA...AGCTACTGAAGTTCTCTTCTCTGTTAAGGATGAAAAGTGGCAGGACCTTACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	TATGGACTTCAGAGATGTCCACGCTTGTCTATTAGAGAATGTCATTCTACACACAGAGCGATTAATCTCTaGAACCACTTTTCTTCAGCC	+
Preference number: 5 (lower is better) Translates to: YGLQRCPRLSIRECHSTHRAINL*NHFSSA Trigger: GGCTGAAGAAAAGTGGTTCAAGAGATTAATCGCTCT...GTGTGTAGAATGACATTCTCTAATAGACAAGCGTGGACATCTCTGAAGTCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	TTTATGATACCTAAAAACCTTAAGAAAGGGGAGCTAAGGGATTCAAGAAGGGTTTGCACTTCTTTGTCTTaGCCTTTATCCTTCTCCTTT	+
Preference number: 5 (lower is better) Translates to: FMIPKNLKKGELRDSRRVCTSLS*PLSFSF Trigger: AAAGGAGAAGGATAAAGGCAAAGACAAAGAAGTGCA...AACCCTTCTTGAATCCCTTAGCTCCCCTTTCTTAAGGTTTTTAGGTATCATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS-3UTR CAA 90 bp	GCATTGCTTAGACTTCTTAGCGGACCTTTTATGATACCTAAAAACCTTAAGAAAGGTTCTACTGCCTTTTaGACGTCTTTACTTGATCTG	+
Preference number: 5 (lower is better) Translates to: ALLRLLSGPFMIPKNLKKGSTAF*TSLLDL Trigger: CAGATCAAGTAAAGACGTCAAAAAGGCAGTAGAACC...TTTCTTAAGGTTTTTAGGTATCATAAAAGGTCCGCTAAGAAGTCTAAGCAATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2
CDS TCA 72 bp	ATGCGAGCGAAGCTGGCGGTCTCTAGACCAGGACCTTaGGTCGGACCTCGGCCTCCTCCCGCCCTTCTTGCG	+
Preference number: 6 (lower is better) Translates to: MRAKLAVSRPGP*VGPRPPPALLA Trigger: CGCAAGAAGGGCGGGAGGAGGCCGAGGTCCGACTCAAGGTCCTGGTCTAGAGACCGCCAGCTTCGCTCGCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS GCA 72 bp	TCGGCCTCCTCCCGCCCTTCTTGCGGCTGTATGTCCTaGTGTCTGAAGAGCTGCTTGAAGACGAGCGCCTCC	+
Preference number: 6 (lower is better) Translates to: SASSRPSCGCMS*CLKSCLKTSAS Trigger: GGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGAGGAGGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS GCA 72 bp	ACCTTGAGTCGGACCTCGGCCTCCTCCCGCCCTTCTTaGGGCTGTATGTCCTGCTGTCTGAAGAGCTGCTTG	+
Preference number: 6 (lower is better) Translates to: TLSRTSASSRPS*GCMSCCLKSCL Trigger: CAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGAGGAGGCCGAGGTCCGACTCAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS CAA 72 bp	GACCTTGAGTCGGACCTCGGCCTCCTCCCGCCCTTCTaGCGGCTGTATGTCCTGCTGTCTGAAGAGCTGCTT	+
Preference number: 6 (lower is better) Translates to: DLESDLGLLPPF*RLYVLLSEELL Trigger: AAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGAGGAGGCCGAGGTCCGACTCAAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS CAA 90 bp	CTAGACCAGGACCTTGAGTCGGACCTCGGCCTCCTCCCGCCCTTCTaGCGGCTGTATGTCCTGCTGTCTGAAGAGCTGCTTGAAGACGAG	+
Preference number: 6 (lower is better) Translates to: LDQDLESDLGLLPPF*RLYVLLSEELLEDE Trigger: CTCGTCTTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGAGGAGGCCGAGGTCCGACTCAAGGTCCTGGTCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS CAA 90 bp	TCCCGCCCTTCTTGCGGCTGTATGTCCTGCTGTCTGAAGAGCTGCTaGAAGACGAGCGCCTCCGGTGTTTCTTTTTCCTCTTGCTTCTGC	+
Preference number: 6 (lower is better) Translates to: SRPSCGCMSCCLKSC*KTSASGVSFSSCFC Trigger: GCAGAAGCAAGAGGAAAAAGAAACACCGGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGGGCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS GCA 72 bp	CCTTCTTGCGGCTGTATGTCCTGCTGTCTGAAGAGCTaGTTGAAGACGAGCGCCTCCGGTGTTTCTTTTTCC	+
Preference number: 6 (lower is better) Translates to: PSCGCMSCCLKS*LKTSASGVSFS Trigger: GGAAAAAGAAACACCGGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS CCA 72 bp	GAGACCTTTGAACTCTATAGGGTTTCCCTCGGCCCCTaGAACGACTGCGACTTCTTTTCCTTCTGGAGCCAT	+
Preference number: 6 (lower is better) Translates to: ETFELYRVSLGP*NDCDFFSFWSH Trigger: ATGGCTCCAGAAGGAAAAGAAGTCGCAGTCGTTCCAGGGGCCGAGGGAAACCCTATAGAGTTCAAAGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162693.8
CDS CAA 72 bp	TCTTGCGGCTGTATGTCCTGCTGTCTGAAGAGCTGCTaGAAGACGAGCGCCTCCGGTGTTTCTTTTTCCTCT	+
Preference number: 6 (lower is better) Translates to: SCGCMSCCLKSC*KTSASGVSFSS Trigger: AGAGGAAAAAGAAACACCGGAGGCGCTCGTCTTCAAGCAGCTCTTCAGACAGCAGGACATACAGCCGCAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000160504.2 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162362.8 ENSMUST00000162693.8
CDS GCA 72 bp	TGCGACTTCTTTTCCTTCTGGAGCCATAAGAAGAGCTaGTGCTTGATCTGCGCCTGCGTCTTCTCTCATAAG	+
Preference number: 6 (lower is better) Translates to: CDFFSFWSHKKS*CLICACVFSHK Trigger: CTTATGAGAGAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCTTATGGCTCCAGAAGGAAAAGAAGTCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000161726.2 ENSMUST00000162036.8
CDS CAA 72 bp	TTTCACTGCTTCTACTATGTGAGCGTGGACGAGGCCTaGACCTGGACCTTCTCTCATAAGAATGCGAGCGAA	+
Preference number: 6 (lower is better) Translates to: FHCFYYVSVDEA*TWTFSHKNASE Trigger: TTCGCTCGCATTCTTATGAGAGAAGGTCCAGGTCAAGGCCTCGTCCACGCTCACATAGTAGAAGCAGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046542.13
CDS GCA 72 bp	GACTTCTTTTCCTTCTGGAGCCATAAGAAGAGCTGCTaGTTGATCTGCGCCTGCGTCTTCTCTCATAAGAAT	+
Preference number: 6 (lower is better) Translates to: DFFSFWSHKKSC*LICACVFSHKN Trigger: ATTCTTATGAGAGAAGACGCAGGCGCAGATCAAGCAGCAGCTCTTCTTATGGCTCCAGAAGGAAAAGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000161726.2 ENSMUST00000162036.8
CDS CAA 72 bp	CCCATCAGCCTTTCTTGTCGGAGAGCGATTAATCTCTaGAACCACTTTTCTTCAGCCTCGGCCTTTTCAATA	+
Preference number: 6 (lower is better) Translates to: PISLSCRRAINL*NHFSSASAFSI Trigger: TATTGAAAAGGCCGAGGCTGAAGAAAAGTGGTTCAAGAGATTAATCGCTCTCCGACAAGAAAGGCTGATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046542.13 ENSMUST00000065074.14 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162693.8
CDS CAA 72 bp	CTACCAGGGTGGCTTGGTCTTCTTCTTTTCTTCTCTTaGCTTCTTCCTCACTCCTTTCTTTGGCTTTTAATG	+
Preference number: 6 (lower is better) Translates to: LPGWLGLLLFFS*LLPHSFLWLLM Trigger: CATTAAAAGCCAAAGAAAGGAGTGAGGAAGAAGCAAAGAGAAGAAAAGAAGAAGACCAAGCCACCCTGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000046542.13 ENSMUST00000065047.13 ENSMUST00000065074.14 ENSMUST00000161726.2 ENSMUST00000162036.8 ENSMUST00000162693.8

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