Pregenerated sensors for RSPO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019880Ensembl transcript IDs: ENSMUST00000092623.5, ENSMUST00000215256.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTGGCTGCACATCTCCTGTCGTTGCAGAAGGCTAAGTGGGTCATaGGAGTTTGTAGCACACACTCAGAGATTCTCTCCTTCTGCACAG | + |
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Preference number: 1 (lower is better) Translates to: EWLHISCRCRRLSGS*EFVAHTQRFSPSAQ Trigger: CTGTGCAGAAGGAGAGAATCTCTGAGTGTGTGCTACAAACTCTCATGACCCACTTAGCCTTCTGCAACGACAGGAGATGTGCAGCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| 3UTR TCA 90 bp | GGAAAACCATTTAAGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTaGAGAAAAGATGTCCAGAAACAGACAGGTAGAAGGCAGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: GKPFKPSGPCEQYSW*RKDVQKQTGRRQTQ Trigger: CTGAGTCTGCCTTCTACCTGTCTGTTTCTGGACATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCTTAAATGGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| 3UTR GCA 90 bp | ATGGAGAAGAAATGGCTAAATGTTGAAGATGCAGGAGGAACAAAGTaGTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGATCCTTT | + |
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Preference number: 1 (lower is better) Translates to: MEKKWLNVEDAGGTK*SSLRNEGERSVRSF Trigger: AAAGGATCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGCATCTTCAACATTTAGCCATTTCTTCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGGAGATTCTCTCCTTCTaGACAGGCCTGCCTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: ERAGTMVPRVAAHLLSLQEILSF*TGLPGS Trigger: GGACCCAGGCAGGCCTGTGCAGAAGGAGAGAATCTC...CTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGTCCAGAAACTCCTGGACATCTGGTTaGGATAGCAGCATCATGAGT | + |
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Preference number: 2 (lower is better) Translates to: SQVAHVSSTVGEEKMSRNSWTSG*DSSIMS Trigger: ACTCATGATGCTGCTATCTCAACCAGATGTCCAGGA...GTTTCTGGACATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR CCA 90 bp | GGTGAACTTGAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGCCTTCTTTGAACATTTaGCTCTTTGCTGTTTACTAT | + |
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Preference number: 2 (lower is better) Translates to: GELERAGTMVPRVAAHLLPSLNI*LFAVYY Trigger: ATAGTAAACAGCAAAGAGCCAAATGTTCAAAGAAGG...CAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTCAAGTTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGGAACAAAGTGCTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGAAGTGCTAATATAGATTaGAGCCCTGTTCCAGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: AGGTKCSSLRNEGERSVRSANID*SPVPGD Trigger: GTCACCTGGAACAGGGCTCCAATCTATATTAGCACT...TCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR TCA 90 bp | AACCAAGGAGTAGTGGAAGATCAACCACACAGTGCTAATATAGATTGGAGCCCTGAGATAGCAGCATCATaGGTCTACAGTAACCTCGCA | + |
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Preference number: 2 (lower is better) Translates to: NQGVVEDQPHSANIDWSPEIAAS*VYSNLA Trigger: TGCGAGGTTACTGTAGACTCATGATGCTGCTATCTC...AGGGCTCCAATCTATATTAGCACTGTGTGGTTGATCTTCCACTACTCCTTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGTCCAGAAACAAAGTATCCCTTCTTTaGACATTTGGCTCTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SQVAHVSSTVGEEKMSRNKVSLL*TFGSLL Trigger: CAGCAAAGAGCCAAATGTTCAAAGAAGGGATACTTT...GTTTCTGGACATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGAAGAAATGGCTAAATGTTGAAGATGCAGGAGGAACAAAGTGCTCATCTCCCTTTAGTTCCAGGTaGACCCATAGGCAGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: MEKKWLNVEDAGGTKCSSPFSSR*THRQVI Trigger: TATTACCTGCCTATGGGTCCACCTGGAACTAAAGGG...AGATGAGCACTTTGTTCCTCCTGCATCTTCAACATTTAGCCATTTCTTCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR CAA 90 bp | CAACTCCACACAATATATTTAACTCTATTATGCATGTTCAGTTTCTaGCAGAGGAGGGCAACCGAAGCAATCCTAAACCACTTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QLHTIYLTLLCMFSF*QRRATEAILNHLLL Trigger: CAGAAGCAAGTGGTTTAGGATTGCTTCGGTTGCCCTCCTCTGCAAGAAACTGAACATGCATAATAGAGTTAAATATATTGTGTGGAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAACCAAGGAGTAGTGGAAGATCAACCACACAGTGCTAATATAGATTGGAGCGGTTTTGAGGGACACTaGATTTTTGAAGTTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: INQGVVEDQPHSANIDWSGFEGH*IFEVAE Trigger: TTCTGCAACTTCAAAAATGCAGTGTCCCTCAAAACC...GCTCCAATCTATATTAGCACTGTGTGGTTGATCTTCCACTACTCCTTGGTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGAAGAAATGGCTAAATGTTGAAGATGCAGGAGGAACAAAGTGCTCATCTGTATGGTTTTACTTTTaGAAGAAAGGTACAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: MEKKWLNVEDAGGTKCSSVWFYF*KKGTGT Trigger: TGTACCTGTACCTTTCTTCCAAAAGTAAAACCATAC...AGATGAGCACTTTGTTCCTCCTGCATCTTCAACATTTAGCCATTTCTTCTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR CCA 72 bp | CTTCAGGAGGCGGTGAACTTGAGAGGGCTGGAACCATaGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LQEAVNLRGLEP*YPEWLHISCRC Trigger: GCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTCAAGTTCACCGCCTCCTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGAGGGACACTGCATTTTaGAAGTTGCAGAATTACCTT | + |
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Preference number: 3 (lower is better) Translates to: ERAGTMVPRVAAHLLSLQRDTAF*KLQNYL Trigger: AAGGTAATTCTGCAACTTCAAAAATGCAGTGTCCCT...CTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR TCA 72 bp | GTTCTCCGGGACAAATCCACCCTGTACATGGAGCCATaGTTCTCTCCCCTGACAAATCTTGGTTTTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: VLRDKSTLYMEP*FSPLTNLGFEG Trigger: TCCCTCAAAACCAAGATTTGTCAGGGGAGAGAATCATGGCTCCATGTACAGGGTGGATTTGTCCCGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR TCA 72 bp | CACATCTCCTGTCGTTGCAGAAGGCTAAGTGGGTCATaGGAGTTTGTAGCACACACTCAGAGATTCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: HISCRCRRLSGS*EFVAHTQRFSP Trigger: AGGAGAGAATCTCTGAGTGTGTGCTACAAACTCTCATGACCCACTTAGCCTTCTGCAACGACAGGAGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGAGGAACAAAGTGCTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGACCTACTAGATACACCTaGTTAGAAAGTAGTATCCCT | + |
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Preference number: 3 (lower is better) Translates to: AGGTKCSSLRNEGERSVRPTRYT*LESSIP Trigger: AGGGATACTACTTTCTAACAAGGTGTATCTAGTAGG...TCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR GCA 72 bp | AAATGGCTAAATGTTGAAGATGCAGGAGGAACAAAGTaGTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: KWLNVEDAGGTK*SSLRNEGERSV Trigger: CACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGCATCTTCAACATTTAGCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR GCA 72 bp | AAGATGGTCTCCAGCTCTATGATTTCTTCCACAGCTTaGCTTATTCCAACTCCACACAATATATTTAACTCT | + |
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Preference number: 3 (lower is better) Translates to: KMVSSSMISSTA*LIPTPHNIFNS Trigger: AGAGTTAAATATATTGTGTGGAGTTGGAATAAGGCAAGCTGTGGAAGAAATCATAGAGCTGGAGACCATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR GCA 72 bp | TTATTCCAACTCCACACAATATATTTAACTCTATTATaGATGTTCAGTTTCTTGCAGAGGAGGGCAACCGAA | + |
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Preference number: 3 (lower is better) Translates to: LFQLHTIYLTLL*MFSFLQRRATE Trigger: TTCGGTTGCCCTCCTCTGCAAGAAACTGAACATGCATAATAGAGTTAAATATATTGTGTGGAGTTGGAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | AGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGAAGCGGGCTCTTCTCTTCTaGTGCTGCTGCCTCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: RAGTMVPRVAAHLLSLQKRALLF*CCCLSL Trigger: CAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGCCCG...CTTCTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGAAGTCTTGTCTCGCTGGTTaGGGGGCACAGGTTACCCTT | + |
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Preference number: 4 (lower is better) Translates to: RAGTMVPRVAAHLLSLQKSCLAG*GAQVTL Trigger: AAGGGTAACCTGTGCCCCCCAACCAGCGAGACAAGA...CTTCTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR GCA 90 bp | GTTTGTAGCACACACTCAGAGATTCTCTCCTTCTGCACAGGCCTGCCTGGGTCCCGGGCTCTTCTCTTCTaGTGCTGCTGCCTCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VCSTHSEILSFCTGLPGSRALLF*CCCLSL Trigger: CAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGCCCG...GGACCCAGGCAGGCCTGTGCAGAAGGAGAGAATCTCTGAGTGTGTGCTACAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGAAGTGGACTCCAAACCTTTaGTGTCAGAGGAGGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RAGTMVPRVAAHLLSLQKWTPNL*CQRRSL Trigger: CAAGCTCCTCCTCTGACAGCAAAGGTTTGGAGTCCA...CTTCTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR GCA 90 bp | CTTGAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCTCTCTTTGTTTTCCTaGTGGTCTGGGGTCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: LERAGTMVPRVAAHLLSLLSLFS*WSGVSM Trigger: CATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAG...CAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR GCA 90 bp | GGTGAACTTGAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGGCTCTTCTCTTCTGCTaGTGCTGCCTCTCTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: GELERAGTMVPRVAAHLLALLFC*CCLSLF Trigger: AAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGC...CAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTCAAGTTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | CTTGAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGTCTTTGTTTTCCTGCTaGTCTGGGGTCTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: LERAGTMVPRVAAHLLSLSLFSC*SGVSML Trigger: CAGCATTGAGACCCCAGACCAGCAGGAAAACAAAGA...CAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR TCA 90 bp | AGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGAAGCAGTCTGGGCTTACATaGCAAACAGCCATTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: RAGTMVPRVAAHLLSLQKQSGLT*QTAIVI Trigger: GATTACAATGGCTGTTTGTCATGTAAGCCCAGACTG...CTTCTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | GTTTGTAGCACACACTCAGAGATTCTCTCCTTCTGCACAGGCCTGCCTGGGTCCCTTCTCTTCTGCTGCTaGTGCCTCTCTTTGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VCSTHSEILSFCTGLPGSLLFCC*CLSLFS Trigger: GGAAAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAG...GGACCCAGGCAGGCCTGTGCAGAAGGAGAGAATCTCTGAGTGTGTGCTACAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGAAGATGGACTCCATTCACTaGCCTCACAGTGTACAATAC | + |
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Preference number: 4 (lower is better) Translates to: RAGTMVPRVAAHLLSLQKMDSIH*PHSVQY Trigger: GTATTGTACACTGTGAGGCCAGTGAATGGAGTCCAT...CTTCTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | GATGTCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGTCTTGTCTCGCTGGTTaGGGGGCACAGGTTACCCTT | + |
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Preference number: 4 (lower is better) Translates to: DVQKQTGRRQTQSSFFRRSCLAG*GAQVTL Trigger: AAGGGTAACCTGTGCCCCCCAACCAGCGAGACAAGA...CCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | TCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTCTGGGGTCTCAATGCTaGACTCCAAACCTTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SRNRQVEGRLSPVSSGGGLGSQC*TPNLCC Trigger: ACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAG...ACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR GCA 90 bp | GATGTCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCCCTTGGCTGAAGGATaGTGTAGTATATCTCGGACC | + |
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Preference number: 4 (lower is better) Translates to: DVQKQTGRRQTQSSFFRRPLAEG*CSISRT Trigger: GGTCCGAGATATACTACAGCATCCTTCAGCCAAGGG...CCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | GATGTCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGGGCACAGGTTACCCTTaGCTGAAGGATGCTGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: DVQKQTGRRQTQSSFFRRGTGYP*LKDAVV Trigger: TACTACAGCATCCTTCAGCCAAGGGTAACCTGTGCC...CCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR TCA 90 bp | AGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGTCCAGAAACCCTCCTTGGCAGCCTTaGCTGACATTAGGATGCATT | + |
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Preference number: 4 (lower is better) Translates to: SQVAHVSSTVGEEKMSRNPPWQP*LTLGCI Trigger: AATGCATCCTAATGTCAGTCAAGGCTGCCAAGGAGG...GTTTCTGGACATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | AACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTGAACTTCTCTCTTTGTTTTCCTaGTGGTCTGGGGTCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: NRQVEGRLSPVSSGGGELLSLFS*WSGVSM Trigger: CATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAG...AAGTTCACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR GCA 90 bp | AACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTGAACTTGCTCTTCTCTTCTGCTaGTGCTGCCTCTCTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: NRQVEGRLSPVSSGGGELALLFC*CCLSLF Trigger: AAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGC...AAGTTCACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGAACAAAGTGCTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGACTGGGGTCTCAATGCTaGACTCCAAACCTTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AGGTKCSSLRNEGERSVRLGSQC*TPNLCC Trigger: ACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAG...TCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR TCA 90 bp | AACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTGAACTTTCCTCGCTCTCCCTTTaGACACTTCTTTCTTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: NRQVEGRLSPVSSGGGELSSLSL*TLLSLY Trigger: GTACAAAGAAAGAAGTGTTCAAAGGGAGAGCGAGGA...AAGTTCACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR TCA 90 bp | AACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTGAACTTGTGTACAGTGCTGACTaGTACCGATTTCTGTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NRQVEGRLSPVSSGGGELVYSAD*YRFLLL Trigger: AAGCAACAGAAATCGGTATCAGTCAGCACTGTACAC...AAGTTCACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | AACCATTTAAGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGGGTCTGGGGTCTCAATaGTGGACTCCAAACCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: NHLSQVAHVSSTVGEEKMGLGSQ*WTPNLC Trigger: GCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACC...CATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCTTAAATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CCA 90 bp | AACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTGAACTTTCCGTAATATCCACTTaGACACGAAGAGAGACACAC | + |
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Preference number: 4 (lower is better) Translates to: NRQVEGRLSPVSSGGGELSVIST*TRRETH Trigger: GTGTGTCTCTCTTCGTGTCCAAGTGGATATTACGGA...AAGTTCACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR TCA 90 bp | GCAGGAGGAACAAAGTGCTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGATCCTCGCTCTCCCTTTaGACACTTCTTTCTTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: AGGTKCSSLRNEGERSVRSSLSL*TLLSLY Trigger: GTACAAAGAAAGAAGTGTTCAAAGGGAGAGCGAGGA...TCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | AACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTGAACTTCTCCTATCTGCTTCATaGCAATCCTTTCCAGAACAA | + |
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Preference number: 4 (lower is better) Translates to: NRQVEGRLSPVSSGGGELLLSAS*QSFPEQ Trigger: TTGTTCTGGAAAGGATTGGCATGAAGCAGATAGGAG...AAGTTCACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | AACCATTTAAGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGCTTCTCTTCTGCTGCTaGTGCCTCTCTTTGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: NHLSQVAHVSSTVGEEKMLLFCC*CLSLFS Trigger: GGAAAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAG...CATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCTTAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAATGGCTAAATGTTGAAGATGCAGGAGGAACAAAGTGCTCATCTCTAACAGCCATTGTAATCTaGACACGTTGCACAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EKKWLNVEDAGGTKCSSLTAIVI*TRCTAS Trigger: GGAGGCTGTGCAACGTGTTCAGATTACAATGGCTGT...TAGAGATGAGCACTTTGTTCCTCCTGCATCTTCAACATTTAGCCATTTCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CCA 90 bp | AACCAAGGAGTAGTGGAAGATCAACCACACAGTGCTAATATAGATTGGAGCCCTATGGACTCCATTCACTaGCCTCACAGTGTACAATAC | + |
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Preference number: 4 (lower is better) Translates to: NQGVVEDQPHSANIDWSPMDSIH*PHSVQY Trigger: GTATTGTACACTGTGAGGCCAGTGAATGGAGTCCAT...AGGGCTCCAATCTATATTAGCACTGTGTGGTTGATCTTCCACTACTCCTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | ATAAACCAAGGAGTAGTGGAAGATCAACCACACAGTGCTAATATAGATTGGAGCAGACACACTCCTATCTaGTTCATGCCAATCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: INQGVVEDQPHSANIDWSRHTPI*FMPILS Trigger: GGAAAGGATTGGCATGAAGCAGATAGGAGTGTGTCT...GCTCCAATCTATATTAGCACTGTGTGGTTGATCTTCCACTACTCCTTGGTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR GCA 90 bp | AGAAAAGATGATTCTTCTCCAGCTGTCGTCATTACATTGAGGATATCTTATAGCTGGACTCCAAACCTTTaGTGTCAGAGGAGGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RKDDSSPAVVITLRISYSWTPNL*CQRRSL Trigger: CAAGCTCCTCCTCTGACAGCAAAGGTTTGGAGTCCA...GCTATAAGATATCCTCAATGTAATGACGACAGCTGGAGAAGAATCATCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CCA 90 bp | AGAAAAGATGATTCTTCTCCAGCTGTCGTCATTACATTGAGGATATCTTATAGCCCTCGGGAGGCGTTTTaGCTGCCAATGTATTCCATA | + |
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Preference number: 4 (lower is better) Translates to: RKDDSSPAVVITLRISYSPREAF*LPMYSI Trigger: TATGGAATACATTGGCAGCCAAAACGCCTCCCGAGG...GCTATAAGATATCCTCAATGTAATGACGACAGCTGGAGAAGAATCATCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR CAA 72 bp | TTTATTGTGGTGGCTTTCTCTCCTACTAGATACACCTaGTTAGAAAGTAGTATCCCTTTAGTTCCAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FIVVAFSPTRYT*LESSIPLVPGG Trigger: TCCACCTGGAACTAAAGGGATACTACTTTCTAACAAGGTGTATCTAGTAGGAGAGAAAGCCACCACAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| 3UTR CAA 72 bp | ACAATATATTTAACTCTATTATGCATGTTCAGTTTCTaGCAGAGGAGGGCAACCGAAGCAATCCTAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: TIYLTLLCMFSF*QRRATEAILNH Trigger: GTGGTTTAGGATTGCTTCGGTTGCCCTCCTCTGCAAGAAACTGAACATGCATAATAGAGTTAAATATATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CAA 90 bp | GAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGTGCTGCTGCCTCTCTTaGTTTTCCTGCTGGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ERAGTMVPRVAAHLLSLQCCCLS*FSCWSG Trigger: CCCAGACCAGCAGGAAAACAAAGAGAGGCAGCAGCA...CTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGTGCTGCTGCCTCTCTTaGTTTTCCTGCTGGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LERAGTMVPRVAAHLLSLCCCLS*FSCWSG Trigger: CCCAGACCAGCAGGAAAACAAAGAGAGGCAGCAGCA...CAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGAAGTGTAATCTGAACACGTaGCACAGCCTCCTTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RAGTMVPRVAAHLLSLQKCNLNT*HSLLGS Trigger: GCTGCCAAGGAGGCTGTGCAACGTGTTCAGATTACA...CTTCTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS GCA 90 bp | TCTCGGGCTCTTCTCTTCTGCTGCTGCTGCCTCTCTTTGTTTTCCTaGTGGTCTGGGGTCTCAATGCTGGACTCCAAACCTTTGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SRALLFCCCCLSLFS*WSGVSMLDSKPLLS Trigger: TGACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGCCCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS GCA 90 bp | ACCGATTTCTGTTGCTTGTCTCGGGCTCTTCTCTTCTGCTGCTGCTaGCTCTCTTTGTTTTCCTGCTGGTCTGGGGTCTCAATGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: TDFCCLSRALLFCCC*LSLFSCWSGVSMLD Trigger: GTCCAGCATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGCCCGAGACAAGCAACAGAAATCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS GCA 90 bp | GACGATTTCTGTTGCTTGTCTCGGGCTCTTCTCTTCTGCTGCTGCTaGCTCTCTTTGTTTTCCTGCTGGTCTGGGGTCTCAATGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: DDFCCLSRALLFCCC*LSLFSCWSGVSMLD Trigger: GTCCAGCATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGCCCGAGACAAGCAACAGAAATCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215256.2 |
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| CDS GCA 90 bp | GCGATAGACGATTTCTGTTGCTTGTCTCGGGCTCTTCTCTTCTGCTaGTGCTGCCTCTCTTTGTTTTCCTGCTGGTCTGGGGTCTCAATG | + |
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Preference number: 5 (lower is better) Translates to: AIDDFCCLSRALLFC*CCLSLFSCWSGVSM Trigger: CATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAGGCAGCAGCAGCAGAAGAGAAGAGCCCGAGACAAGCAACAGAAATCGTCTATCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215256.2 |
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| CDS CCA 90 bp | GCTGCTGCCTCTCTTTGTTTTCCTGCTGGTCTGGGGTCTCAATGCTaGACTCCAAACCTTTGCTGTCAGAGGAGGAGCTTGTTTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: AAASLCFPAGLGSQC*TPNLCCQRRSLFPF Trigger: GAAAGGAAACAAGCTCCTCCTCTGACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAGGCAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | TCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTTCCTCGGGAGGCGTTTaGGCTGCCAATGTATTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SRNRQVEGRLSPVSSGGGSSGGV*AANVFH Trigger: ATGGAATACATTGGCAGCCAAAACGCCTCCCGAGGA...ACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CAA 90 bp | GATGTCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGGGGCACAGGTTACCCTaGGCTGAAGGATGCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: DVQKQTGRRQTQSSFFRRGHRLP*AEGCCS Trigger: ACTACAGCATCCTTCAGCCAAGGGTAACCTGTGCCC...CCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGAACAAAGTGCTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGACGTTGCACAGCCTCCTaGGCAGCCTTGACTGACATT | + |
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Preference number: 5 (lower is better) Translates to: AGGTKCSSLRNEGERSVRRCTAS*AALTDI Trigger: AATGTCAGTCAAGGCTGCCAAGGAGGCTGTGCAACG...TCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CAA 90 bp | GTTTGTAGCACACACTCAGAGATTCTCTCCTTCTGCACAGGCCTGCCTGGGTCCGTTTCAGTCCCCCTTTaGAAGCCACATGTTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VCSTHSEILSFCTGLPGSVSVPL*KPHVFP Trigger: AGGAAAAACATGTGGCTTCAAAAGGGGGACTGAAAC...GGACCCAGGCAGGCCTGTGCAGAAGGAGAGAATCTCTGAGTGTGTGCTACAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | AGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGTCCAGAAACGGGCACAGGTTACCCTaGGCTGAAGGATGCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SQVAHVSSTVGEEKMSRNGHRLP*AEGCCS Trigger: ACTACAGCATCCTTCAGCCAAGGGTAACCTGTGCCC...GTTTCTGGACATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGTGTCAGAGGAGGAGCTaGTTTCCTTTCTTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LERAGTMVPRVAAHLLSLCQRRS*FPFFLL Trigger: AAGAAGAAAGAAAGGAAACAAGCTCCTCCTCTGACA...CAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | TCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGCGGTGACGATTTCTGTTGCTaGTCTCGGGCTCTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SRNRQVEGRLSPVSSGGGDDFCC*SRALLF Trigger: GAAGAGAAGAGCCCGAGACAAGCAACAGAAATCGTC...ACCGCCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | GTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGTCCAGAAACAGACAGGCCTCCTTGGCAGCCTaGACTGACATTAGGATGCAT | + |
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Preference number: 5 (lower is better) Translates to: VAHVSSTVGEEKMSRNRQASLAA*TDIRMH Trigger: ATGCATCCTAATGTCAGTCAAGGCTGCCAAGGAGGC...CTGTCTGTTTCTGGACATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CAA 90 bp | GAGAGGGCTGGAACCATGGTACCCAGAGTGGCTGCACATCTCCTGTCGTTGCAGGTGCAGAAATTTTTGTaGAAACAGGTATCACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: ERAGTMVPRVAAHLLSLQVQKFL*KQVSQS Trigger: TGACTGTGATACCTGTTTCAACAAAAATTTCTGCAC...CTGCAACGACAGGAGATGTGCAGCCACTCTGGGTACCATGGTTCCAGCCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGAACAAAGTGCTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGAACCGATTTCTGTTGCTaGTCTCGGGCTCTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGGTKCSSLRNEGERSVRTDFCC*SRALLF Trigger: GAAGAGAAGAGCCCGAGACAAGCAACAGAAATCGGT...TCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CAA 90 bp | GATGTCCAGAAACAGACAGGTAGAAGGCAGACTCAGTCCAGTTTCTTCAGGAGGTTCCTCGCTCTCCCTTaGAACACTTCTTTCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DVQKQTGRRQTQSSFFRRFLALP*NTSFFV Trigger: TACAAAGAAAGAAGTGTTCAAAGGGAGAGCGAGGAA...CCTCCTGAAGAAACTGGACTGAGTCTGCCTTCTACCTGTCTGTTTCTGGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS GCA 90 bp | TGTTTTCCTGCTGGTCTGGGGTCTCAATGCTGGACTCCAAACCTTTaGTGTCAGAGGAGGAGCTTGTTTCCTTTCTTTCTTCTTTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: CFPAGLGSQCWTPNL*CQRRSLFPFFLLYS Trigger: TGAATAAAGAAGAAAGAAAGGAAACAAGCTCCTCCTCTGACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACCAGCAGGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGAACAAAGTGCTCATCTCTAAGAAACGAAGGGGAAAGGTCAGTGAGATGTCAGAGGAGGAGCTaGTTTCCTTTCTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGGTKCSSLRNEGERSVRCQRRS*FPFFLL Trigger: AAGAAGAAAGAAAGGAAACAAGCTCCTCCTCTGACA...TCTCACTGACCTTTCCCCTTCGTTTCTTAGAGATGAGCACTTTGTTCCTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CAA 90 bp | AACCATTTAAGCCAAGTGGCCCATGTGAGCAGTACAGTTGGTGAAGAAAAGATGGATAGACGATTTCTGTaGCTTGTCTCGGGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NHLSQVAHVSSTVGEEKMDRRFL*LVSGSS Trigger: AGAAGAGCCCGAGACAAGCAACAGAAATCGTCTATC...CATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCTTAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215256.2 |
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| CDS CCA 90 bp | CCTTTTGAAGCCACATGTTTTTCCTTTCTTCATACATGGACTCCATaGACTCCATTCACTGGCCTCACAGTGTACAATACTGACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: PFEATCFSFLHTWTP*TPFTGLTVYNTDTF Trigger: GAATGTGTCAGTATTGTACACTGTGAGGCCAGTGAATGGAGTCCATGGAGTCCATGTATGAAGAAAGGAAAAACATGTGGCTTCAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGAAATGGCTAAATGTTGAAGATGCAGGAGGAACAAAGTGCTCATCTCTAGTTTCAGTCCCCCTTTaGAAGCCACATGTTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EKKWLNVEDAGGTKCSSLVSVPL*KPHVFP Trigger: AGGAAAAACATGTGGCTTCAAAAGGGGGACTGAAAC...TAGAGATGAGCACTTTGTTCCTCCTGCATCTTCAACATTTAGCCATTTCTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS-3UTR CAA 90 bp | ATAAACCAAGGAGTAGTGGAAGATCAACCACACAGTGCTAATATAGATTGGAGCTTCCTCGCTCTCCCTTaGAACACTTCTTTCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: INQGVVEDQPHSANIDWSFLALP*NTSFFV Trigger: TACAAAGAAAGAAGTGTTCAAAGGGAGAGCGAGGAA...GCTCCAATCTATATTAGCACTGTGTGGTTGATCTTCCACTACTCCTTGGTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS CCA 90 bp | TGTACATTTATTTATATCTGGATATCGAGTTCCGTAATATCCACTTaGACACGAAGAGAGACACACTCCTATCTGCTTCATGCCAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CTFIYIWISSSVIST*TRRETHSYLLHANP Trigger: AGGATTGGCATGAAGCAGATAGGAGTGTGTCTCTCTTCGTGTCCAAGTGGATATTACGGAACTCGATATCCAGATATAAATAAATGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS GCA 72 bp | GCCTCTCTTTGTTTTCCTGCTGGTCTGGGGTCTCAATaGTGGACTCCAAACCTTTGCTGTCAGAGGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASLCFPAGLGSQ*WTPNLCCQRRS Trigger: GCTCCTCCTCTGACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACCAGCAGGAAAACAAAGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS CAA 72 bp | CTCCAGTTCCCAATAGAGAGCGATAGACGATTTCTGTaGCTTGTCTCGGGCTCTTCTCTTCTGCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQFPIESDRRFL*LVSGSSLLLLL Trigger: CAGCAGCAGCAGAAGAGAAGAGCCCGAGACAAGCAACAGAAATCGTCTATCGCTCTCTATTGGGAACTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215256.2 |
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| CDS GCA 72 bp | GCTGGTCTGGGGTCTCAATGCTGGACTCCAAACCTTTaGTGTCAGAGGAGGAGCTTGTTTCCTTTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGLGSQCWTPNL*CQRRSLFPFFL Trigger: AAGAAAGAAAGGAAACAAGCTCCTCCTCTGACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS CAA 90 bp | GAAGGATGCTGTAGTATATCTCGGACCCGTGTTTCAGTCCCCCTTTaGAAGCCACATGTTTTTCCTTTCTTCATACATGGACTCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: EGCCSISRTRVSVPL*KPHVFPFFIHGLHG Trigger: TCCATGGAGTCCATGTATGAAGAAAGGAAAAACATGTGGCTTCAAAAGGGGGACTGAAACACGGGTCCGAGATATACTACAGCATCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS CAA 90 bp | TTGTTTTCCTGCTGGTCTGGGGTCTCAATGCTGGACTCCAAACCTTaGCTGTCAGAGGAGGAGCTTGTTTCCTTTCTTTCTTCTTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: LFSCWSGVSMLDSKP*LSEEELVSFLSSLF Trigger: GAATAAAGAAGAAAGAAAGGAAACAAGCTCCTCCTCTGACAGCAAAGGTTTGGAGTCCAGCATTGAGACCCCAGACCAGCAGGAAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092623.5 ENSMUST00000215256.2 |
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| CDS CAA 90 bp | TTGTACATTTATTTATATCTGGATATCGAGTTCCGTAATATCCACTaGGACACGAAGAGAGACACACTCCTATCTGCTTCATGCCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: LYIYLYLDIEFRNIH*DTKRDTLLSASCQS Trigger: GGATTGGCATGAAGCAGATAGGAGTGTGTCTCTCTTCGTGTCCAAGTGGATATTACGGAACTCGATATCCAGATATAAATAAATGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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| CDS CCA 72 bp | ATTTATATCTGGATATCGAGTTCCGTAATATCCACTTaGACACGAAGAGAGACACACTCCTATCTGCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: IYIWISSSVIST*TRRETHSYLLH Trigger: ATGAAGCAGATAGGAGTGTGTCTCTCTTCGTGTCCAAGTGGATATTACGGAACTCGATATCCAGATATAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092623.5 |
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