Pregenerated sensors for RSPO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051920Ensembl transcript IDs: ENSMUST00000063492.8, ENSMUST00000226810.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCATTGCCATCCATCAAAATAGGCACAGGTGCATTCTCTGGTGGTaGTCTACAGCCTTGTGCCTCCTGTGGGTCCACCGTGCCAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: SIAIHQNRHRCILWW*STALCLLWVHRARD Trigger: GTCCCTGGCACGGTGGACCCACAGGAGGCACAAGGCTGTAGATCACCACCAGAGAATGCACCTGTGCCTATTTTGATGGATGGCAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR CCA 90 bp | CCATGCTTGGGCACCTCCCTCTGCAGCATTACTGAAAATGGATACTaGTCAGAGGATCAGGAATGCTGTCCACCAGTGTGGACTGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: PCLGTSLCSITENGY*SEDQECCPPVWTGE Trigger: CTCTCCAGTCCACACTGGTGGACAGCATTCCTGATCCTCTGACCAGTATCCATTTTCAGTAATGCTGCAGAGGGAGGTGCCCAAGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR TCA 90 bp | AATAACGCTGAGTCCATGCTTGGGCACCTCCCTCTGCAGCATTACTaGAAATGGATACTGGTCAGAGGATCAGGAATGCTGTCCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: NNAESMLGHLPLQHY*KWILVRGSGMLSTS Trigger: ACTGGTGGACAGCATTCCTGATCCTCTGACCAGTATCCATTTTCAGTAATGCTGCAGAGGGAGGTGCCCAAGCATGGACTCAGCGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR CCA 90 bp | TGGATACTGGTCAGAGGATCAGGAATGCTGTCCACCAGTGTGGACTaGAGAGTAGCTTTGTGCACTTTTGCAAAACAACAACATAAACAA | + |
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Preference number: 1 (lower is better) Translates to: WILVRGSGMLSTSVD*RVALCTFAKQQHKQ Trigger: TTGTTTATGTTGTTGTTTTGCAAAAGTGCACAAAGCTACTCTCCAGTCCACACTGGTGGACAGCATTCCTGATCCTCTGACCAGTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR TCA 90 bp | ATTTTTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATaGAAGTCACAAGTGAACAGTGCTTGCTTGCTTAGCATTGCCATC | + |
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Preference number: 1 (lower is better) Translates to: IFPCTFVFDSAQCEK*KSQVNSACLLSIAI Trigger: GATGGCAATGCTAAGCAAGCAAGCACTGTTCACTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR GCA 90 bp | CTCATTATCTTAGTGACAACAGCTTCCCCAGTAATTCAAGAACATTaGCAAGTGACCTATCACTCAAAGTCATGGGTTATTTTGAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LIILVTTASPVIQEH*QVTYHSKSWVILSL Trigger: CAAACTCAAAATAACCCATGACTTTGAGTGATAGGTCACTTGGCAATGTTCTTGAATTACTGGGGAAGCTGTTGTCACTAAGATAATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR CCA 90 bp | TGTTCTAATATAGTTGATTCCGATTCAACAGAGAAATGTAAGATGTaGCTCTCACTTGGGCGAAGCCATTCTATTTTCTCTCTCATTATC | + |
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Preference number: 1 (lower is better) Translates to: CSNIVDSDSTEKCKM*LSLGRSHSIFSLII Trigger: GATAATGAGAGAGAAAATAGAATGGCTTCGCCCAAGTGAGAGCCACATCTTACATTTCTCTGTTGAATCGGAATCAACTATATTAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCTCCACCAGTGTGGACTaGAGAGTAGCTTTGTGCACT | + |
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Preference number: 2 (lower is better) Translates to: CASCGSTVPGTGSYDTLCSTSVD*RVALCT Trigger: AGTGCACAAAGCTACTCTCCAGTCCACACTGGTGGA...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCTGGAGAGTAGCTTTGTaGACTTTTGCAAAACAACAA | + |
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Preference number: 2 (lower is better) Translates to: CASCGSTVPGTGSYDTLCWRVAL*TFAKQQ Trigger: TTGTTGTTTTGCAAAAGTGCACAAAGCTACTCTCCA...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTTCCACCAGTGTGGACTaGAGAGTAGCTTTGTGCACT | + |
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Preference number: 2 (lower is better) Translates to: GQVLMTHCAHHKSTDASASTSVD*RVALCT Trigger: AGTGCACAAAGCTACTCTCCAGTCCACACTGGTGGA...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGTTGGGCACCTCCCTCTaGAGCATTACTGAAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: CSRNFHSIPLARTQSHCRLGTSL*SITENG Trigger: TCCATTTTCAGTAATGCTGCAGAGGGAGGTGCCCAA...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGGCACAGTGTGAGAAATaGAAGTCACAAGTGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: CSRNFHSIPLARTQSHCRAQCEK*KSQVNS Trigger: ACTGTTCACTTGTGACTTTCATTTCTCACACTGTGC...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTACTGAAAATGGATACTaGTCAGAGGATCAGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: GQVLMTHCAHHKSTDASATENGY*SEDQEC Trigger: GCATTCCTGATCCTCTGACCAGTATCCATTTTCAGT...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGACTGAAAATGGATACTaGTCAGAGGATCAGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: CSRNFHSIPLARTQSHCRTENGY*SEDQEC Trigger: GCATTCCTGATCCTCTGACCAGTATCCATTTTCAGT...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGTTGGGCACCTCCCTCTaGAGCATTACTGAAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: FHAHLSLTVHSVRNESHKLGTSL*SITENG Trigger: TCCATTTTCAGTAATGCTGCAGAGGGAGGTGCCCAA...CTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTCATTGTAGGACCGTTTaGAGGTCACTGATGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: ININAKEVVLPMQGKERLHCRTV*RSLMLR Trigger: TCTCAGCATCAGTGACCTTCAAACGGTCCTACAATG...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTCAGAAAACCTCAAAATaGCCCAGCTATTTCTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: GQVLMTHCAHHKSTDASAQKTSK*PSYFLY Trigger: ATACAAGAAATAGCTGGGGCATTTTGAGGTTTTCTG...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTTCAGCACTGATCCTCTaGCATCAGTCATTTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: ININAKEVVLPMQGKERLSALIL*HQSFDS Trigger: AGAGTCAAATGACTGATGTCAGAGGATCAGTGCTGA...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTCAAGATGCCTCATGCTaGTTTCTCTCTGTGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: ININAKEVVLPMQGKERLQDASC*FLSVCM Trigger: CATACACACAGAGAGAAAGCAGCATGAGGCATCTTG...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTATGCTGAGAACGCCATaGGGTGACACTAAACATTTT | + |
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Preference number: 2 (lower is better) Translates to: ININAKEVVLPMQGKERLMLRTP*GDTKHF Trigger: AAAATGTTTAGTGTCACCTCATGGCGTTCTCAGCAT...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTTCTTATGACACACTGTaGTCATCACAAGAGTACAGA | + |
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Preference number: 2 (lower is better) Translates to: ININAKEVVLPMQGKERLSYDTL*SSQEYR Trigger: TCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGA...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR CAA 90 bp | TCTCATTATCTTAGTGACAACAGCTTCCCCAGTAATTCAAGAACATaGCCAAGTGACCTATCACTCAAAGTCATGGGTTATTTTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SHYLSDNSFPSNSRT*PSDLSLKVMGYFEF Trigger: AAACTCAAAATAACCCATGACTTTGAGTGATAGGTCACTTGGCAATGTTCTTGAATTACTGGGGAAGCTGTTGTCACTAAGATAATGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTCAGAAAACCTCAAAATaGCCCAGCTATTTCTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: ININAKEVVLPMQGKERLQKTSK*PSYFLY Trigger: ATACAAGAAATAGCTGGGGCATTTTGAGGTTTTCTG...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTGTTCTAACTTTTTCCTaGATCAGCCAGGGAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: ININAKEVVLPMQGKERLVLTFS*ISQGNN Trigger: ATTATTTCCCTGGCTGATCCAGGAAAAAGTTAGAAC...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR TCA 72 bp | CTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATaGCACACTGTGCTCATCACAAGAGTACAGATGCAT | + |
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Preference number: 3 (lower is better) Translates to: LLWVHRARDRFL*HTVLITRVQMH Trigger: ATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR TCA 72 bp | GAGTCCATGCTTGGGCACCTCCCTCTGCAGCATTACTaGAAATGGATACTGGTCAGAGGATCAGGAATGCTG | + |
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Preference number: 3 (lower is better) Translates to: ESMLGHLPLQHY*KWILVRGSGML Trigger: CAGCATTCCTGATCCTCTGACCAGTATCCATTTTCAGTAATGCTGCAGAGGGAGGTGCCCAAGCATGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGACGCTGAGTCCATGCTaGGGCACCTCCCTCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: FHAHLSLTVHSVRNESHKTLSPC*GTSLCS Trigger: GCTGCAGAGGGAGGTGCCCAAGCATGGACTCAGCGT...CTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTACGCTGAGTCCATGCTaGGGCACCTCCCTCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: ININAKEVVLPMQGKERLTLSPC*GTSLCS Trigger: GCTGCAGAGGGAGGTGCCCAAGCATGGACTCAGCGT...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGGTGAACAGTGCTTGCTaGCTTAGCATTGCCATCCAT | + |
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Preference number: 3 (lower is better) Translates to: CSRNFHSIPLARTQSHCRVNSAC*LSIAIH Trigger: ATGGATGGCAATGCTAAGCAAGCAAGCACTGTTCAC...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR CCA 72 bp | ATGCTGCTTTCTCTCTGTGTGTATGGTGACATGAACTaGGGAAGTTCTATCAGCACTGATCCTCTGACATCA | + |
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Preference number: 3 (lower is better) Translates to: MLLSLCVYGDMN*GSSISTDPLTS Trigger: TGATGTCAGAGGATCAGTGCTGATAGAACTTCCCCAGTTCATGTCACCATACACACAGAGAGAAAGCAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR TCA 72 bp | TTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGTaGACAGTGCTTGCTTGCTTAGCATTGCCATCCATC | + |
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Preference number: 3 (lower is better) Translates to: LTVHSVRNESHK*TVLACLALPSI Trigger: GATGGATGGCAATGCTAAGCAAGCAAGCACTGTTCACTTGTGACTTTCATTTCTCACACTGTGCACTGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR TCA 72 bp | TGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATaGAAGTCACAAGTGAACAGTGCTTGCTTGCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: CTFVFDSAQCEK*KSQVNSACLLS Trigger: GCTAAGCAAGCAAGCACTGTTCACTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR TCA 72 bp | GTCATCAATTTTGGGACTCAAAAGAAATTTGGCTTCTaGTGGCAAGATGCCTCATGCTGCTTTCTCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VINFGTQKKFGF*WQDASCCFLSV Trigger: CACAGAGAGAAAGCAGCATGAGGCATCTTGCCATCAGAAGCCAAATTTCTTTTGAGTCCCAAAATTGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR GCA 72 bp | AGTTTTGCCAATGCAAGGCAAGGAAAGGCTTCGCCTTaGTTTGGATGTTTCCTCAAAACTATGCAACTTATT | + |
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Preference number: 3 (lower is better) Translates to: SFANARQGKASP*FGCFLKTMQLI Trigger: AATAAGTTGCATAGTTTTGAGGAAACATCCAAAGCAAGGCGAAGCCTTTCCTTGCCTTGCATTGGCAAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTGGACTCAAAAGAAATTaGGCTTCTGATGGCAAGATG | + |
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Preference number: 3 (lower is better) Translates to: ININAKEVVLPMQGKERLGLKRN*ASDGKM Trigger: CATCTTGCCATCAGAAGCCAAATTTCTTTTGAGTCC...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR GCA 72 bp | TTAGTGACAACAGCTTCCCCAGTAATTCAAGAACATTaGCAAGTGACCTATCACTCAAAGTCATGGGTTATT | + |
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Preference number: 3 (lower is better) Translates to: LVTTASPVIQEH*QVTYHSKSWVI Trigger: AATAACCCATGACTTTGAGTGATAGGTCACTTGGCAATGTTCTTGAATTACTGGGGAAGCTGTTGTCACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR CCA 72 bp | ATAGTTGATTCCGATTCAACAGAGAAATGTAAGATGTaGCTCTCACTTGGGCGAAGCCATTCTATTTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: IVDSDSTEKCKM*LSLGRSHSIFS Trigger: AGAGAAAATAGAATGGCTTCGCCCAAGTGAGAGCCACATCTTACATTTCTCTGTTGAATCGGAATCAACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTTTTTTCCATGCACATTaGTCTTTGACAGTGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: ININAKEVVLPMQGKERLFFHAH*SLTVHS Trigger: ACTGTGCACTGTCAAAGACAAATGTGCATGGAAAAA...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS-3UTR CCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCCCATCTTGCATCTCCTaGACTCCGCAATGGTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: CASCGSTVPGTGSYDTLCPSCIS*TPQWSD Trigger: GTCCGACCATTGCGGAGTCCAGGAGATGCAAGATGG...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS-3UTR CCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCCTGGACAGTGCCTCATaGCCATCTTGCATCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CASCGSTVPGTGSYDTLCLDSAS*PSCISW Trigger: CCAGGAGATGCAAGATGGCCATGAGGCACTGTCCAG...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS-3UTR GCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCACGTGCGGTTGTTTCTaGTACACGTTCCCCATTCGC | + |
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Preference number: 4 (lower is better) Translates to: CASCGSTVPGTGSYDTLCTCGCF*YTFPIR Trigger: GCGAATGGGGAACGTGTAGCAGAAACAACCGCACGT...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS-3UTR GCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCAGGAAGACGCTGTGCTaGTCTTGGGCTCTCTCAATC | + |
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Preference number: 4 (lower is better) Translates to: CASCGSTVPGTGSYDTLCRKTLC*SWALSI Trigger: GATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCT...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS-3UTR GCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCTCTGTTGACATCGGCTaGAACCATTGTCCTTCGAAC | + |
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Preference number: 4 (lower is better) Translates to: CASCGSTVPGTGSYDTLCSVDIG*NHCPSN Trigger: GTTCGAAGGACAATGGTTGCAGCCGATGTCAACAGA...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS-3UTR GCA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCCACAGTTTTCTATTCTaGATCGTGCACATCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: CASCGSTVPGTGSYDTLCHSFLF*IVHICS Trigger: TGAACAGATGTGCACGATGCAGAATAGAAAACTGTG...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS-3UTR GCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGGCGAGGAAGACGCTGTaGTGCTCTTGGGCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSRNFHSIPLARTQSHCRARKTL*CSWALS Trigger: TGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCTCGC...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGTGCGTCTCCATCGGTTaGCTTGGCACTGGCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSRNFHSIPLARTQSHCRCVSIG*LGTGCN Trigger: ATTACAGCCAGTGCCAAGGCAACCGATGGAGACGCA...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGACGTGCGGTTGTTTCTaGTACACGTTCCCCATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSRNFHSIPLARTQSHCRTCGCF*YTFPIR Trigger: GCGAATGGGGAACGTGTAGCAGAAACAACCGCACGT...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTACGCTGTGCTGCTCTTaGGCTCTCTCAATCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQVLMTHCAHHKSTDASATLCCS*ALSISF Trigger: GAAGCTGATTGAGAGAGCCCAAGAGCAGCACAGCGT...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGCCCCATTCGCTCCAATaGCCAACTTCACAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSRNFHSIPLARTQSHCRPHSLQ*PTSQPS Trigger: AGAAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGG...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGTTTCCTCCTGGACAGTaGCTCATGGCCATCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSRNFHSIPLARTQSHCRFPPGQ*LMAILH Trigger: ATGCAAGATGGCCATGAGGCACTGTCCAGGAGGAAA...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTTTTCCTCCTGGACAGTaGCTCATGGCCATCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQVLMTHCAHHKSTDASAFPPGQ*LMAILH Trigger: ATGCAAGATGGCCATGAGGCACTGTCCAGGAGGAAA...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGTCTGTTGACATCGGCTaGAACCATTGTCCTTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSRNFHSIPLARTQSHCRSVDIG*NHCPSN Trigger: GTTCGAAGGACAATGGTTGCAGCCGATGTCAACAGA...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | TTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGGCCTCATGGCCATCTTaGATCTCCTGGACTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FHAHLSLTVHSVRNESHKASWPS*ISWTPQ Trigger: TTGCGGAGTCCAGGAGATGCAAGATGGCCATGAGGC...CTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTGCCTCATGGCCATCTTaGATCTCCTGGACTCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ININAKEVVLPMQGKERLASWPS*ISWTPQ Trigger: TTGCGGAGTCCAGGAGATGCAAGATGGCCATGAGGC...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | TTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGAGGAAGACGCTGTGCTaGTCTTGGGCTCTCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FHAHLSLTVHSVRNESHKRKTLC*SWALSI Trigger: GATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCT...CTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTCCATCTTGCATCTCCTaGACTCCGCAATGGTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ININAKEVVLPMQGKERLPSCIS*TPQWSD Trigger: GTCCGACCATTGCGGAGTCCAGGAGATGCAAGATGG...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTTGCGTCTCCATCGGTTaGCTTGGCACTGGCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ININAKEVVLPMQGKERLCVSIG*LGTGCN Trigger: ATTACAGCCAGTGCCAAGGCAACCGATGGAGACGCA...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGTGTTCTCTTTCCTCCTaGACAGTGCCTCATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FHAHLSLTVHSVRNESHKCSLSS*TVPHGH Trigger: ATGGCCATGAGGCACTGTCCAGGAGGAAAGAGAACA...CTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR TCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTCCCCATTCGCTCCAATaGCCAACTTCACAACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ININAKEVVLPMQGKERLPHSLQ*PTSQPS Trigger: AGAAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGG...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGTTCTATTCTGCATCGTaGACATCTGTTCATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRNFHSIPLARTQSHCRFYSAS*TSVHIW Trigger: CCAGATATGAACAGATGTGCACGATGCAGAATAGAA...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTCACAGTTTTCTATTCTaGATCGTGCACATCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQVLMTHCAHHKSTDASAHSFLF*IVHICS Trigger: TGAACAGATGTGCACGATGCAGAATAGAAAACTGTG...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGAAGAACAACTTCTGTTaGCATCGGCTGCAACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FHAHLSLTVHSVRNESHKKNNFC*HRLQPL Trigger: CAATGGTTGCAGCCGATGTCAACAGAAGTTGTTCTT...CTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CCA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTCGCAATGGTCGGACATaGTATTGTGTCTTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ININAKEVVLPMQGKERLRNGRT*YCVFCW Trigger: CCAGCAAAAGACACAATACCATGTCCGACCATTGCG...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| 3UTR CAA 72 bp | CTTAGTGACAACAGCTTCCCCAGTAATTCAAGAACATaGCCAAGTGACCTATCACTCAAAGTCATGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSDNSFPSNSRT*PSDLSLKVMGY Trigger: ATAACCCATGACTTTGAGTGATAGGTCACTTGGCAATGTTCTTGAATTACTGGGGAAGCTGTTGTCACTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| 3UTR CAA 72 bp | TTTCATAAGTCATCAATTTTGGGACTCAAAAGAAATTaGGCTTCTGATGGCAAGATGCCTCATGCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHKSSILGLKRN*ASDGKMPHAAF Trigger: GAAAGCAGCATGAGGCATCTTGCCATCAGAAGCCAAATTTCTTTTGAGTCCCAAAATTGATGACTTATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCAATCCACACGTGCGGTaGTTTCTGCTACACGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CASCGSTVPGTGSYDTLCNPHVR*FLLHVP Trigger: GGGAACGTGTAGCAGAAACAACCGCACGTGTGGATT...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCCATCGGCTGCAACCATaGTCCTTCGAACAAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: CASCGSTVPGTGSYDTLCHRLQP*SFEQDK Trigger: TTTGTCTTGTTCGAAGGACAATGGTTGCAGCCGATG...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCAAAGAACAACTTCTGTaGACATCGGCTGCAACCATT | + |
|
Preference number: 5 (lower is better) Translates to: CASCGSTVPGTGSYDTLCKEQLL*TSAATI Trigger: AATGGTTGCAGCCGATGTCAACAGAAGTTGTTCTTT...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTTGCCTCATGGCCATCTaGCATCTCCTGGACTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQVLMTHCAHHKSTDASACLMAI*HLLDSA Trigger: TGCGGAGTCCAGGAGATGCAAGATGGCCATGAGGCA...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS CCA 90 bp | TATTGGTTCACTCTGTCTGTAGCGAGGAAGACGCTGTGCTGCTCTTaGGCTCTCTCAATCAGCTTCCGCCTCTTCTTCTTGTTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YWFTLSVARKTLCCS*ALSISFRLFFLFLF Trigger: GAAGAGAAACAAGAAGAAGAGGCGGAAGCTGATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCTCGCTACAGACAGAGTGAACCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCCTCCTGTGGGTCCACCGTGCCAGGGACAGGTTCTTATGACACACTGTGCTTCGTACAAAAGTCTTaGCTAAAGCAAGAATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CASCGSTVPGTGSYDTLCFVQKS*LKQESQ Trigger: CTGTGATTCTTGCTTTAGCAAAGACTTTTGTACGAA...GCACAGTGTGTCATAAGAACCTGTCCCTGGCACGGTGGACCCACAGGAGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS CCA 90 bp | CCTCATGGCCATCTTGCATCTCCTGGACTCCGCAATGGTCGGACATaGTATTGTGTCTTTTGCTGGCTTTTTAACAATCTGCCGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PHGHLASPGLRNGRT*YCVFCWLFNNLPCS Trigger: AGAACACGGCAGATTGTTAAAAAGCCAGCAAAAGACACAATACCATGTCCGACCATTGCGGAGTCCAGGAGATGCAAGATGGCCATGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | GGACAGGTTCTTATGACACACTGTGCTCATCACAAGAGTACAGATGCATCAGCTTCTCCATCGGTTGCCTaGGCACTGGCTGTAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GQVLMTHCAHHKSTDASASPSVA*ALAVIH Trigger: ATGGATTACAGCCAGTGCCAAGGCAACCGATGGAGA...AGCTGATGCATCTGTACTCTTGTGATGAGCACAGTGTGTCATAAGAACCTGTCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGAATCCACACGTGCGGTaGTTTCTGCTACACGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRNFHSIPLARTQSHCRNPHVR*FLLHVP Trigger: GGGAACGTGTAGCAGAAACAACCGCACGTGTGGATT...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS TCA 90 bp | CCACACGTGCGGTTGTTTCTGCTACACGTTCCCCATTCGCTCCAATaGCCAACTTCACAACCTTCTACACATTCCATAGTCTCATCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PHVRLFLLHVPHSLQ*PTSQPSTHSIVSSN Trigger: GTTAGATGAGACTATGGAATGTGTAGAAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGGAACGTGTAGCAGAAACAACCGCACGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS GCA 90 bp | TCTCTCAATCAGCTTCCGCCTCTTCTTCTTGTTTCTCTTCTCTTTTaGCTTTGGTGTTCTCTTTCCTCCTGGACAGTGCCTCATGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLNQLPPLLLVSLLF*LWCSLSSWTVPHGH Trigger: ATGGCCATGAGGCACTGTCCAGGAGGAAAGAGAACACCAAAGGCAAAAGAGAAGAGAAACAAGAAGAAGAGGCGGAAGCTGATTGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATGCACATTTGTCTTTGACAGTGCACAGTGTGAGAAATGAAAGTCACAAGTGCCTCATGGCCATCTaGCATCTCCTGGACTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FHAHLSLTVHSVRNESHKCLMAI*HLLDSA Trigger: TGCGGAGTCCAGGAGATGCAAGATGGCCATGAGGCA...CTTGTGACTTTCATTTCTCACACTGTGCACTGTCAAAGACAAATGTGCATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGCATCGGCTGCAACCATaGTCCTTCGAACAAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: CSRNFHSIPLARTQSHCRHRLQP*SFEQDK Trigger: TTTGTCTTGTTCGAAGGACAATGGTTGCAGCCGATG...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGCAGGAATTTCCACAGCATACCCCTAGCTAGAACACAGTCTCATTGTAGGTGGTCGGACATGGTATaGTGTCTTTTGCTGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSRNFHSIPLARTQSHCRWSDMV*CLLLAF Trigger: AAAAGCCAGCAAAAGACACAATACCATGTCCGACCA...CCTACAATGAGACTGTGTTCTAGCTAGGGGTATGCTGTGGAAATTCCTGCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTTCTCCATCGGTTGCCTaGGCACTGGCTGTAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ININAKEVVLPMQGKERLSPSVA*ALAVIH Trigger: ATGGATTACAGCCAGTGCCAAGGCAACCGATGGAGA...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS-3UTR CAA 90 bp | ATCAACATAAATGCTAAAGAGGTAGTTTTGCCAATGCAAGGCAAGGAAAGGCTTTTCGTACAAAAGTCTTaGCTAAAGCAAGAATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: ININAKEVVLPMQGKERLFVQKS*LKQESQ Trigger: CTGTGATTCTTGCTTTAGCAAAGACTTTTGTACGAA...AAGCCTTTCCTTGCCTTGCATTGGCAAAACTACCTCTTTAGCATTTATGTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS GCA 72 bp | TGGTTCACTCTGTCTGTAGCGAGGAAGACGCTGTGCTaGTCTTGGGCTCTCTCAATCAGCTTCCGCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WFTLSVARKTLC*SWALSISFRLF Trigger: GAAGAGGCGGAAGCTGATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCTCGCTACAGACAGAGTGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS CAA 72 bp | GTTCTCTTTCCTCCTGGACAGTGCCTCATGGCCATCTaGCATCTCCTGGACTCCGCAATGGTCGGACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VLFPPGQCLMAI*HLLDSAMVGHG Trigger: ACCATGTCCGACCATTGCGGAGTCCAGGAGATGCAAGATGGCCATGAGGCACTGTCCAGGAGGAAAGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS GCA 72 bp | TTCTCTTTCCTCCTGGACAGTGCCTCATGGCCATCTTaGATCTCCTGGACTCCGCAATGGTCGGACATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FSFLLDSASWPS*ISWTPQWSDMV Trigger: TACCATGTCCGACCATTGCGGAGTCCAGGAGATGCAAGATGGCCATGAGGCACTGTCCAGGAGGAAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS GCA 72 bp | TATTGGTTCACTCTGTCTGTAGCGAGGAAGACGCTGTaGTGCTCTTGGGCTCTCTCAATCAGCTTCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YWFTLSVARKTL*CSWALSISFRL Trigger: GAGGCGGAAGCTGATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCTCGCTACAGACAGAGTGAACCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS CCA 72 bp | ACTCTGTCTGTAGCGAGGAAGACGCTGTGCTGCTCTTaGGCTCTCTCAATCAGCTTCCGCCTCTTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLSVARKTLCCS*ALSISFRLFFL Trigger: CAAGAAGAAGAGGCGGAAGCTGATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCTCGCTACAGACAGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS CAA 72 bp | CACTCTGTCTGTAGCGAGGAAGACGCTGTGCTGCTCTaGGGCTCTCTCAATCAGCTTCCGCCTCTTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HSVCSEEDAVLL*GSLNQLPPLLL Trigger: AAGAAGAAGAGGCGGAAGCTGATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCTCGCTACAGACAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
||
| CDS CCA 72 bp | CCGCCTCTTCTTCTTGTTTCTCTTCTCTTTTGCCTTTaGTGTTCTCTTTCCTCCTGGACAGTGCCTCATGGC | + |
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Preference number: 6 (lower is better) Translates to: PPLLLVSLLFCL*CSLSSWTVPHG Trigger: GCCATGAGGCACTGTCCAGGAGGAAAGAGAACACCAAAGGCAAAAGAGAAGAGAAACAAGAAGAAGAGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS CAA 90 bp | TTATTGGTTCACTCTGTCTGTAGCGAGGAAGACGCTGTGCTGCTCTaGGGCTCTCTCAATCAGCTTCCGCCTCTTCTTCTTGTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLVHSVCSEEDAVLL*GSLNQLPPLLLVSL Trigger: AAGAGAAACAAGAAGAAGAGGCGGAAGCTGATTGAGAGAGCCCAAGAGCAGCACAGCGTCTTCCTCGCTACAGACAGAGTGAACCAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS GCA 72 bp | CAGCTTCCGCCTCTTCTTCTTGTTTCTCTTCTCTTTTaGCTTTGGTGTTCTCTTTCCTCCTGGACAGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: QLPPLLLVSLLF*LWCSLSSWTVP Trigger: AGGCACTGTCCAGGAGGAAAGAGAACACCAAAGGCAAAAGAGAAGAGAAACAAGAAGAAGAGGCGGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS CAA 72 bp | TCCGCCTCTTCTTCTTGTTTCTCTTCTCTTTTGCCTTaGGTGTTCTCTTTCCTCCTGGACAGTGCCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: SASSSCFSSLLP*VFSFLLDSASW Trigger: CCATGAGGCACTGTCCAGGAGGAAAGAGAACACCAAAGGCAAAAGAGAAGAGAAACAAGAAGAAGAGGCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS TCA 72 bp | CGGTTGTTTCTGCTACACGTTCCCCATTCGCTCCAATaGCCAACTTCACAACCTTCTACACATTCCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLFLLHVPHSLQ*PTSQPSTHSIV Trigger: GACTATGGAATGTGTAGAAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGGAACGTGTAGCAGAAACAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS CCA 72 bp | CATCTTGCATCTCCTGGACTCCGCAATGGTCGGACATaGTATTGTGTCTTTTGCTGGCTTTTTAACAATCTG | + |
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Preference number: 6 (lower is better) Translates to: HLASPGLRNGRT*YCVFCWLFNNL Trigger: CAGATTGTTAAAAAGCCAGCAAAAGACACAATACCATGTCCGACCATTGCGGAGTCCAGGAGATGCAAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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| CDS CAA 72 bp | ATAACTAGCTCGCTTATTGCGTCTCCATCGGTTGCCTaGGCACTGGCTGTAATCCATACAGTTCAGAATGAT | + |
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Preference number: 6 (lower is better) Translates to: ITSSLIASPSVA*ALAVIHTVQND Trigger: ATCATTCTGAACTGTATGGATTACAGCCAGTGCCAAGGCAACCGATGGAGACGCAATAAGCGAGCTAGTTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063492.8 ENSMUST00000226810.2 |
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