Pregenerated sensors for RSPO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028871Ensembl transcript IDs: ENSMUST00000030687.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCTCTCTCCCTCTCGGCAGCTGCTCCAGCTTTGGCTCCAATCTaGCATCCATCTGTCAGATGCTGTCCCAGAAGTTCCTCCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PSLSLSAAAPALAPI*HPSVRCCPRSSSRR Trigger: CCTTCTGGAGGAACTTCTGGGACAGCATCTGACAGATGGATGGCAGATTGGAGCCAAAGCTGGAGCAGCTGCCGAGAGGGAGAGAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR GCA 90 bp | TCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGCTaGTCCAGCTTTGGCTCCAATCTGCCATCCATCTGTCAGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: SQAGKALSLSLPLGS*SSFGSNLPSICQML Trigger: CAGCATCTGACAGATGGATGGCAGATTGGAGCCAAAGCTGGAGCAGCTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR CCA 90 bp | GAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGCTGCTCCAGCTTTaGCTCCAATCTGCCATCCATCTGTCAGATGCTGTCCCAGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: ESAFPLSPSRQLLQL*LQSAIHLSDAVPEV Trigger: AACTTCTGGGACAGCATCTGACAGATGGATGGCAGATTGGAGCCAAAGCTGGAGCAGCTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR CCA 90 bp | GTTGACGTTTTCAGATGTGGCCATATGTGTGCATGGATGGATGGATaGATAGTTGGATGGGTGGGTGGATGGGGTATGTGTGGACTCTCC | + |
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Preference number: 1 (lower is better) Translates to: VDVFRCGHMCAWMDG*IVGWVGGWGMCGLS Trigger: GGAGAGTCCACACATACCCCATCCACCCACCCATCCAACTATCCATCCATCCATCCATGCACACATATGGCCACATCTGAAAACGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR CAA 90 bp | GGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGCTGCTCCAGCTTaGGCTCCAATCTGCCATCCATCTGTCAGATGCTGTCCCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: GKRFPSLSLSAAAPA*APICHPSVRCCPRS Trigger: ACTTCTGGGACAGCATCTGACAGATGGATGGCAGATTGGAGCCAAAGCTGGAGCAGCTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCAGAAGTTCCTCCAGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAATGTGTGTGTGTGTGTTaGCGTTTTCAGATGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSQKFLQKVPLLSFRCWECVCVC*RFQMWP Trigger: TGGCCACATCTGAAAACGTCAACACACACACACACA...TTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTGGAGGAACTTCTGGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR-3UTR CAA 90 bp | CCGACAATCAAGTCTCACAGCTGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCGCAGCTGCTCCAGCTTaGGCTCCAATCTGCCATCCA | + |
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Preference number: 3 (lower is better) Translates to: PTIKSHSWECLSSRESAFAAAPA*APICHP Trigger: TGGATGGCAGATTGGAGCCAAAGCTGGAGCAGCTGC...GAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCAGCTGTGAGACTTGATTGTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR GCA 72 bp | GGGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGCTaGTCCAGCTTTGGCTCCAATCTGCCATCCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: GKALSLSLPLGS*SSFGSNLPSIC Trigger: ACAGATGGATGGCAGATTGGAGCCAAAGCTGGAGCAGCTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR GCA 72 bp | TCCCTCTCGGCAGCTGCTCCAGCTTTGGCTCCAATCTaGCATCCATCTGTCAGATGCTGTCCCAGAAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SLSAAAPALAPI*HPSVRCCPRSS Trigger: GGAACTTCTGGGACAGCATCTGACAGATGGATGGCAGATTGGAGCCAAAGCTGGAGCAGCTGCCGAGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR GCA 72 bp | TTCTCATCTCCGACAATCAAGTCTCACAGCTGGGAGTaGCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: FSSPTIKSHSWE*LSSRESAFPLS Trigger: AGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCAGCTGTGAGACTTGATTGTCGGAGATGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR GCA 72 bp | GGGTGGGTGGATGGGGTATGTGTGGACTCTCCCAGATaGTCCAGTTCTGGAAAGTTCTCATTATACAGTACA | + |
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Preference number: 3 (lower is better) Translates to: GWVDGVCVDSPR*SSSGKFSLYST Trigger: TGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGGGAGAGTCCACACATACCCCATCCACCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR CCA 72 bp | TGGGGTATGTGTGGACTCTCCCAGATGCTCCAGTTCTaGAAAGTTCTCATTATACAGTACAGCACTGTACTC | + |
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Preference number: 3 (lower is better) Translates to: WGMCGLSQMLQF*KVLIIQYSTVL Trigger: GAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGGGAGAGTCCACACATACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| 3UTR CCA 72 bp | TTCCTCCAGAAGGTTCCACTCCTTAGTTTCAGATGCTaGGAAAGGTTCTCTCAGATATGTCTTCCAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FLQKVPLLSFRC*ERFSQICLPRA Trigger: TGCTCTTGGAAGACATATCTGAGAGAACCTTTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTGGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR GCA 90 bp | TGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGGTCCCTGGCTGTGGCTaGTGTTGCCCTTTGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: WECLSSRESAFPLSPSRQVPGCG*CCPLCL Trigger: GAGACACAAAGGGCAACAGCAGCCACAGCCAGGGAC...CTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | CCGACAATCAAGTCTCACAGCTGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCCCCTTGGCGCAGGCTTaGCTCCCCTCAGCACTGATC | + |
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Preference number: 4 (lower is better) Translates to: PTIKSHSWECLSSRESAFPLAQA*LPSALI Trigger: GATCAGTGCTGAGGGGAGCCAAGCCTGCGCCAAGGG...GAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCAGCTGTGAGACTTGATTGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | CACAGCTGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTACTTGCGGGTCTCTTTaGTGTCGGAGCAGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HSWECLSSRESAFPLSPSTCGSL*CRSRWC Trigger: ACACCACCTGCTCCGACACCAAAGAGACCCGCAAGT...AGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCAGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | TGCTCCAGCTTTGGCTCCAATCTGCCATCCATCTGTCAGATGCTGTCCCAGAAGGGCTCCCCTCAGCACTaGTCCGCCTCTGTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CSSFGSNLPSICQMLSQKGSPQH*SASVSC Trigger: GCAAGAGACAGAGGCGGATCAGTGCTGAGGGGAGCC...CTTCTGGGACAGCATCTGACAGATGGATGGCAGATTGGAGCCAAAGCTGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | GCCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGCTGCTCCGCTCGATCTTGCATTTaGTGCATTTGTTCATGTCGG | + |
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Preference number: 4 (lower is better) Translates to: ASQAGKALSLSLPLGSCSARSCI*CICSCR Trigger: CCGACATGAACAAATGCATCAAATGCAAGATCGAGC...GGAGCAGCTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | GGGTGGGTGGATGGGGTATGTGTGGACTCTCCCAGATGCTCCAGTTCTGGAAAGTGCAGAAGTTGTGGCTaGAGCAGGCCTCACAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GWVDGVCVDSPRCSSSGKCRSCG*SRPHSA Trigger: AGCACTGTGAGGCCTGCTTCAGCCACAACTTCTGCA...CTTTCCAGAACTGGAGCATCTGGGAGAGTCCACACATACCCCATCCACCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR GCA 90 bp | CACAGCTGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTTGTTCATGTCGGGGTTaGGGGCATCAAAGTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: HSWECLSSRESAFPLSPSCSCRG*GHQSIQ Trigger: CTGGATACTTTGATGCCCGCAACCCCGACATGAACA...AGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGGTGGATGGGGTATGTGTGGACTCTCCCAGATGCTCCAGTTCTGGAAAGTTGGTGCAGAAGTTGTaGCTGAAGCAGGCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GWVDGVCVDSPRCSSSGKLVQKL*LKQASQ Trigger: CTGTGAGGCCTGCTTCAGCCACAACTTCTGCACCAA...CTTTCCAGAACTGGAGCATCTGGGAGAGTCCACACATACCCCATCCACCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | TGTGGACTCTCCCAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCTCTGTCTCTTGCCCTTaGTCCCCCGGCTGCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: CGLSQMLQFWKVLIIQYSSVSCP*SPGCPR Trigger: CCGTGGGCAGCCGGGGGATCAAGGGCAAGAGACAGA...GCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGGGAGAGTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | TGTGGACTCTCCCAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCTGGTGTCGGAGCAGGTaGTGTGGTCTCCCCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: CGLSQMLQFWKVLIIQYSWCRSR*CGLPRE Trigger: CTCCCGGGGGAGACCACACCACCTGCTCCGACACCA...GCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGGGAGAGTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | AAACCTTTAAGCAGTTTCCAAGTCAGGTCATCCGTGACGTGTACCACGGATGTGTGGCCCTGTTGTCCCTaGCTGTGGCTGCTGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KPLSSFQVRSSVTCTTDVWPCCP*LWLLLP Trigger: GGGCAACAGCAGCCACAGCCAGGGACAACAGGGCCA...CACATCCGTGGTACACGTCACGGATGACCTGACTTGGAAACTGCTTAAAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTTGACGTTTTCAGATGTGGCCATATGTGTGCATAGGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVLTFSDVAICVHRQTPT*RMSFLS Trigger: GGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCCT...ATGCACACATATGGCCACATCTGAAAACGTCAACACACACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAAAGGTTCTCTCAGATATGTCGCCCTCAGGGCAGGCTaGATAGCAGCGGCCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RRFHSLVSDAGKGSLRYVALRAG*IAAALV Trigger: CACAAGGGCCGCTGCTATCCAGCCTGCCCTGAGGGC...GACATATCTGAGAGAACCTTTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | AGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAAAGGTTCTCTCAGATATGTCTCGGAGCAGGTGGTGTaGTCTCCCCCGGGAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: RRFHSLVSDAGKGSLRYVSEQVV*SPPGAW Trigger: CCATGCTCCCGGGGGAGACCACACCACCTGCTCCGA...GACATATCTGAGAGAACCTTTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCCAGAAGTTCCTCCAGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAACACATTGTGCAGGACTaGCGCACTCCATGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSQKFLQKVPLLSFRCWEHIVQD*RTPWCC Trigger: ACAGCACCATGGAGTGCGGCAGTCCTGCACAATGTG...TTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTGGAGGAACTTCTGGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCCAGAAGTTCCTCCAGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAATTCTTCCTGGCCGGATaGCTGTTGGCATTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSQKFLQKVPLLSFRCWEFFLAG*LLAFSL Trigger: GAGGGAGAATGCCAACAGGCATCCGGCCAGGAAGAA...TTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTGGAGGAACTTCTGGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTCCACAGGAGAGCTCACAGCCCTTaGCGCAGGCTTGGCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LQFWKVLIIQYSTVLFHRRAHSP*RRLGSP Trigger: AGGGGAGCCAAGCCTGCGCCAAGGGCTGTGAGCTCT...CCTGTGGAAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAAAGGTTCTCTCAGATATGTTGGCCGGATGCCTGTTaGCATTCTCCCTCCGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QKVPLLSFRCWERFSQICWPDAC*HSPSGP Trigger: AGGGCCGGAGGGAGAATGCCAACAGGCATCCGGCCA...ACATATCTGAGAGAACCTTTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | GTACCACGGATGTGTAATAATTCTCATCTCCGACAATCAAGTCTCACAGCTGGGTCCTCTCCAGCAGAATaGAGAGCTTGGGCGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: VPRMCNNSHLRQSSLTAGSSPAE*RAWAST Trigger: AGTGCTCGCCCAAGCTCTTCATTCTGCTGGAGAGGA...CCCAGCTGTGAGACTTGATTGTCGGAGATGAGAATTATTACACATCCGTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR GCA 90 bp | CTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTCCACAGGGGCTGTGGCTGCTGTTaGCCTTTGTGTCTCCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LQFWKVLIIQYSTVLFHRGCGCC*PLCLRE Trigger: CTCTCGGAGACACAAAGGGCAACAGCAGCCACAGCC...CCTGTGGAAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | CCAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTACAGCTTCCTCTTCTTaGAGCAGGGTCCCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: PDAPVLESSHYTVQHCTLTASSS*SRVPTG Trigger: CCCCGTGGGGACCCTGCTCCAAGAAGAGGAAGCTGT...AAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CCA 90 bp | GTACCACGGATGTGTAATAATTCTCATCTCCGACAATCAAGTCTCACAGCTGGGCCTTGCTGTTCTTCCTaGCCGGATGCCTGTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VPRMCNNSHLRQSSLTAGPCCSS*PDACWH Trigger: ATGCCAACAGGCATCCGGCCAGGAAGAACAGCAAGG...CCCAGCTGTGAGACTTGATTGTCGGAGATGAGAATTATTACACATCCGTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | AAGTTCTCATTATACAGTACAGCACTGTACTCTTCCACAGGTATCTGGAGACCGCCAGGTAGGTCCTACTaGTGTGAGTGGCCCTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KFSLYSTALYSSTGIWRPPGRSY*CEWPCC Trigger: ACAACAGGGCCACTCACATCAGTAGGACCTACCTGG...CGGTCTCCAGATACCTGTGGAAGAGTACAGTGCTGTACTGTATAATGAGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR GCA 90 bp | TCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTCCACAGGTGAGCATGGAGCACTCTaGGTGTCCGCTCTTCCGATC | + |
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Preference number: 4 (lower is better) Translates to: SSSGKFSLYSTALYSSTGEHGAL*VSALPI Trigger: GATCGGAAGAGCGGACACGCAGAGTGCTCCATGCTC...ACCTGTGGAAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | CAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTCGCAACCGTTGACTTCTaGACAGAGCTCACAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QMLQFWKVLIIQYSTVLFATVDF*TELTAL Trigger: AAGGGCTGTGAGCTCTGTTCAGAAGTCAACGGTTGC...GAAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR TCA 90 bp | CCAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTAAGTACAAGCCCTCCTaGCACTTGGTGCAGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: PDAPVLESSHYTVQHCTLKYKPS*HLVQKL Trigger: CAACTTCTGCACCAAGTGTCAGGAGGGCTTGTACTT...AAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR GCA 90 bp | CCAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTAAGCAGGCCTCACAGTaGTCGATCTTGCATTTGATG | + |
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Preference number: 4 (lower is better) Translates to: PDAPVLESSHYTVQHCTLKQASQ*SILHLM Trigger: CATCAAATGCAAGATCGAGCACTGTGAGGCCTGCTT...AAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 90 bp | CCTCTGGGCAGGGCGTCCTGCGCACGGTACACTTGCGGGTCTCTTTaGTGTCGGAGCAGGTGGTGTGGTCTCCCCCGGGAGCATGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: PLGRASCARYTCGSL*CRSRWCGLPREHGA Trigger: TGCTCCATGCTCCCGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGACCCGCAAGTGTACCGTGCGCAGGACGCCCTGCCCAGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS GCA 90 bp | TGTCGGAGCAGGTGGTGTGGTCTCCCCCGGGAGCATGGAGCACTCTaGGTGTCCGCTCTTCCGATCCCTTCCGGAAACCGCACAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: CRSRWCGLPREHGAL*VSALPIPSGNRTAS Trigger: GGAAGCTGTGCGGTTTCCGGAAGGGATCGGAAGAGCGGACACGCAGAGTGCTCCATGCTCCCGGGGGAGACCACACCACCTGCTCCGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 90 bp | CGCACGGTACACTTGCGGGTCTCTTTGGTGTCGGAGCAGGTGGTGTaGTCTCCCCCGGGAGCATGGAGCACTCTGCGTGTCCGCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RTVHLRVSLVSEQVV*SPPGAWSTLRVRSS Trigger: GGAAGAGCGGACACGCAGAGTGCTCCATGCTCCCGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGACCCGCAAGTGTACCGTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 90 bp | TCCTGCGCACGGTACACTTGCGGGTCTCTTTGGTGTCGGAGCAGGTaGTGTGGTCTCCCCCGGGAGCATGGAGCACTCTGCGTGTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SCARYTCGSLWCRSR*CGLPREHGALCVSA Trigger: AGCGGACACGCAGAGTGCTCCATGCTCCCGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGACCCGCAAGTGTACCGTGCGCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 90 bp | GTCTCTTTGGTGTCGGAGCAGGTGGTGTGGTCTCCCCCGGGAGCATaGAGCACTCTGCGTGTCCGCTCTTCCGATCCCTTCCGGAAACCG | + |
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Preference number: 5 (lower is better) Translates to: VSLVSEQVVWSPPGA*STLRVRSSDPFRKP Trigger: CGGTTTCCGGAAGGGATCGGAAGAGCGGACACGCAGAGTGCTCCATGCTCCCGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | TGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGATCCGCCTCTGTCTCTaGCCCTTGATCCCCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: WECLSSRESAFPLSPSRQIRLCL*PLIPRL Trigger: CAGCCGGGGGATCAAGGGCAAGAGACAGAGGCGGAT...CTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS GCA 90 bp | GCTGCTGTTGCCCTTTGTGTCTCCGAGAGTTGGAGCCCGGCTCCTTaGTGTTCTTCCTGGCCGGATGCCTGTTGGCATTCTCCCTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: AAVALCVSESWSPAP*CSSWPDACWHSPSG Trigger: GCCGGAGGGAGAATGCCAACAGGCATCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 90 bp | GCATCAAAGTATCCAGGTGGGCAGGACGGCAGGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCCAGCAGAATGAAGAGCTTGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASKYPGGQDGRQTPT*RMSFLSSRMKSLGE Trigger: CTCGCCCAAGCTCTTCATTCTGCTGGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCCTGCCGTCCTGCCCACCTGGATACTTTGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 90 bp | TTGTCCCTGGCTGTGGCTGCTGTTGCCCTTTGTGTCTCCGAGAGTTaGAGCCCGGCTCCTTGCTGTTCTTCCTGGCCGGATGCCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLAVAAVALCVSES*SPAPCCSSWPDACW Trigger: CCAACAGGCATCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCCACAGCCAGGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS TCA 90 bp | CAGAATGAAGAGCTTGGGCGAGCACTTGAGGCAACCGTTGACTTCTaGACAGAGCTCACAGCCCTTGGCGCAGGCTTGGCTCCCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNEELGRALEATVDF*TELTALGAGLAPLS Trigger: GCTGAGGGGAGCCAAGCCTGCGCCAAGGGCTGTGAGCTCTGTTCAGAAGTCAACGGTTGCCTCAAGTGCTCGCCCAAGCTCTTCATTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 90 bp | CAACCGTTGACTTCTGAACAGAGCTCACAGCCCTTGGCGCAGGCTTaGCTCCCCTCAGCACTGATCCGCCTCTGTCTCTTGCCCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: QPLTSEQSSQPLAQA*LPSALIRLCLLPLI Trigger: GATCAAGGGCAAGAGACAGAGGCGGATCAGTGCTGAGGGGAGCCAAGCCTGCGCCAAGGGCTGTGAGCTCTGTTCAGAAGTCAACGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | GCCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGCTGCTCCTTGTTCATGTCGGGGTaGCGGGCATCAAAGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASQAGKALSLSLPLGSCSLFMSG*RASKYP Trigger: TGGATACTTTGATGCCCGCAACCCCGACATGAACAA...GGAGCAGCTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCAAGCCGGGAAAGCGCTTTCCCTCTCTCTCCCTCTCGGCAGCTGCTCCACTTGAGGCAACCGTaGACTTCTGAACAGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CLSSRESAFPLSPSRQLLHLRQP*TSEQSS Trigger: TGAGCTCTGTTCAGAAGTCAACGGTTGCCTCAAGTG...GAGCAGCTGCCGAGAGGGAGAGAGAGGGAAAGCGCTTTCCCGGCTTGAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | CCGACAATCAAGTCTCACAGCTGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCAGCTTGGGCGAGCACTaGAGGCAACCGTTGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PTIKSHSWECLSSRESAFSLGEH*RQPLTS Trigger: AGAAGTCAACGGTTGCCTCAAGTGCTCGCCCAAGCT...GAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCAGCTGTGAGACTTGATTGTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | TTCCTCCAGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAAAGGTTCTCTCAGCTGGCCGGATGCCTGTaGGCATTCTCCCTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLQKVPLLSFRCWERFSQLAGCL*AFSLRP Trigger: GGGCCGGAGGGAGAATGCCAACAGGCATCCGGCCAG...CTGAGAGAACCTTTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTTGACGTTTTCAGATGTGGCCATATGTGTGCATCAGAGCTCACAGCCCTaGGCGCAGGCTTGGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVLTFSDVAICVHQSSQP*AQAWLP Trigger: GGGGAGCCAAGCCTGCGCCAAGGGCTGTGAGCTCTG...ATGCACACATATGGCCACATCTGAAAACGTCAACACACACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | ACTCTCCCAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTCTCTGTCTCTTGCCCTaGATCCCCCGGCTGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: TLPDAPVLESSHYTVQHCLCLLP*IPRLPT Trigger: CGTGGGCAGCCGGGGGATCAAGGGCAAGAGACAGAG...ACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGGGAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | CTCATCTCCGACAATCAAGTCTCACAGCTGGGAGTGCCTCTCAAGCCGGGAAAGTTGCATTTGATGCATTaGTTCATGTCGGGGTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LISDNQVSQLGVPLKPGKLHLMH*FMSGLR Trigger: CCGCAACCCCGACATGAACAAATGCATCAAATGCAA...CTTTCCCGGCTTGAGAGGCACTCCCAGCTGTGAGACTTGATTGTCGGAGATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | ACTCTCCCAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTCACAGCTTCCTCTTCTaGGAGCAGGGTCCCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPDAPVLESSHYTVQHCHSFLF*EQGPHG Trigger: CCCGTGGGGACCCTGCTCCAAGAAGAGGAAGCTGTG...ACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTGGGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTTGACGTTTTCAGATGTGGCCATATGTGTGCATCACTTGCGGGTCTCTTaGGTGTCGGAGCAGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVLTFSDVAICVHHLRVS*VSEQVV Trigger: CACCACCTGCTCCGACACCAAAGAGACCCGCAAGTG...ATGCACACATATGGCCACATCTGAAAACGTCAACACACACACACACACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | CCGACAATCAAGTCTCACAGCTGGGAGTGCCTCTCAAGCCGGGAAAGCGCTTTCTGCTCGATCTTGCATTaGATGCATTTGTTCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PTIKSHSWECLSSRESAFCSILH*MHLFMS Trigger: CGACATGAACAAATGCATCAAATGCAAGATCGAGCA...GAAAGCGCTTTCCCGGCTTGAGAGGCACTCCCAGCTGTGAGACTTGATTGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAAAGGTTCTCTCAGATATGTTTGTGTCTCCGAGAGTaGGAGCCCGGCTCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKVPLLSFRCWERFSQICLCLRE*EPGSLL Trigger: CAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAA...ACATATCTGAGAGAACCTTTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGGTTCCACTCCTTAGTTTCAGATGCTGGGAAAGGTTCTCTCAGATATGTTGGCTGTGGCTGCTGTaGCCCTTTGTGTCTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKVPLLSFRCWERFSQICWLWLL*PFVSPR Trigger: TCTCGGAGACACAAAGGGCAACAGCAGCCACAGCCA...ACATATCTGAGAGAACCTTTCCCAGCATCTGAAACTAAGGAGTGGAACCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | CAGATGCTCCAGTTCTGGAAAGTTCTCATTATACAGTACAGCACTGTACTCTTCAGCAGAATGAAGAGCTaGGGCGAGCACTTGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QMLQFWKVLIIQYSTVLFSRMKS*GEHLRQ Trigger: TTGCCTCAAGTGCTCGCCCAAGCTCTTCATTCTGCT...GAAGAGTACAGTGCTGTACTGTATAATGAGAACTTTCCAGAACTGGAGCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS-3UTR CAA 90 bp | AAACCTTTAAGCAGTTTCCAAGTCAGGTCATCCGTGACGTGTACCACGGATGTGTCACAGTGCTCGATCTaGCATTTGATGCATTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPLSSFQVRSSVTCTTDVSQCSI*HLMHLF Trigger: GAACAAATGCATCAAATGCAAGATCGAGCACTGTGA...CACATCCGTGGTACACGTCACGGATGACCTGACTTGGAAACTGCTTAAAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | CCCTCTGGGCAGGGCGTCCTGCGCACGGTACACTTGCGGGTCTCTTaGGTGTCGGAGCAGGTGGTGTGGTCTCCCCCGGGAGCATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSGQGVLRTVHLRVS*VSEQVVWSPPGAWS Trigger: GCTCCATGCTCCCGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGACCCGCAAGTGTACCGTGCGCAGGACGCCCTGCCCAGAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | CTCCTCTTCTGCCCCTCTGGGCAGGGCGTCCTGCGCACGGTACACTaGCGGGTCTCTTTGGTGTCGGAGCAGGTGGTGTGGTCTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LLFCPSGQGVLRTVH*RVSLVSEQVVWSPP Trigger: CGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGACCCGCAAGTGTACCGTGCGCAGGACGCCCTGCCCAGAGGGGCAGAAGAGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 72 bp | AGGGCGTCCTGCGCACGGTACACTTGCGGGTCTCTTTaGTGTCGGAGCAGGTGGTGTGGTCTCCCCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RASCARYTCGSL*CRSRWCGLPRE Trigger: CTCCCGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGACCCGCAAGTGTACCGTGCGCAGGACGCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | CAGGGCGTCCTGCGCACGGTACACTTGCGGGTCTCTTaGGTGTCGGAGCAGGTGGTGTGGTCTCCCCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QGVLRTVHLRVS*VSEQVVWSPPG Trigger: TCCCGGGGGAGACCACACCACCTGCTCCGACACCAAAGAGACCCGCAAGTGTACCGTGCGCAGGACGCCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS GCA 72 bp | AGGTGGTGTGGTCTCCCCCGGGAGCATGGAGCACTCTaGGTGTCCGCTCTTCCGATCCCTTCCGGAAACCGC | + |
|
Preference number: 6 (lower is better) Translates to: RWCGLPREHGAL*VSALPIPSGNR Trigger: GCGGTTTCCGGAAGGGATCGGAAGAGCGGACACGCAGAGTGCTCCATGCTCCCGGGGGAGACCACACCACCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS GCA 72 bp | CCTTCCTCCTCTTCTGCCCCTCTGGGCAGGGCGTCCTaGGCACGGTACACTTGCGGGTCTCTTTGGTGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSAPLGRAS*ARYTCGSLWCR Trigger: CCGACACCAAAGAGACCCGCAAGTGTACCGTGCGCAGGACGCCCTGCCCAGAGGGGCAGAAGAGGAGGAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 72 bp | GTGTCGGAGCAGGTGGTGTGGTCTCCCCCGGGAGCATaGAGCACTCTGCGTGTCCGCTCTTCCGATCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSEQVVWSPPGA*STLRVRSSDPF Trigger: GAAGGGATCGGAAGAGCGGACACGCAGAGTGCTCCATGCTCCCGGGGGAGACCACACCACCTGCTCCGACAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | GCTTGGCTCCCCTCAGCACTGATCCGCCTCTGTCTCTaGCCCTTGATCCCCCGGCTGCCCACGGCGATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AWLPSALIRLCL*PLIPRLPTAMC Trigger: ACACATCGCCGTGGGCAGCCGGGGGATCAAGGGCAAGAGACAGAGGCGGATCAGTGCTGAGGGGAGCCAAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | CAGGCTTGGCTCCCCTCAGCACTGATCCGCCTCTGTCTCTTGCCCTaGATCCCCCGGCTGCCCACGGCGATGTGTGTCCAGCTCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: QAWLPSALIRLCLLP*IPRLPTAMCVQLRT Trigger: GGTTCTGAGCTGGACACACATCGCCGTGGGCAGCCGGGGGATCAAGGGCAAGAGACAGAGGCGGATCAGTGCTGAGGGGAGCCAAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 72 bp | TCCGAGAGTTGGAGCCCGGCTCCTTGCTGTTCTTCCTaGCCGGATGCCTGTTGGCATTCTCCCTCCGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SESWSPAPCCSS*PDACWHSPSGP Trigger: AGGGCCGGAGGGAGAATGCCAACAGGCATCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | GGCCCTGTTGTCCCTGGCTGTGGCTGCTGTTGCCCTTaGTGTCTCCGAGAGTTGGAGCCCGGCTCCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPVVPGCGCCCP*CLRELEPGSLL Trigger: CAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCCACAGCCAGGGACAACAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | GGCTGCTGTTGCCCTTTGTGTCTCCGAGAGTTGGAGCCCGGCTCCTaGCTGTTCTTCCTGGCCGGATGCCTGTTGGCATTCTCCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GCCCPLCLRELEPGS*LFFLAGCLLAFSLR Trigger: CCGGAGGGAGAATGCCAACAGGCATCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS GCA 72 bp | GGGTCCCCACGGGGACCACTCGCTCATTTCACATTGTaGAGGACTGCCGCACTCCATGGTGCTGTTAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSPRGPLAHFTL*RTAALHGAVSG Trigger: GCCGCTAACAGCACCATGGAGTGCGGCAGTCCTGCACAATGTGAAATGAGCGAGTGGTCCCCGTGGGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 72 bp | TATCCAGGTGGGCAGGACGGCAGGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCCAGCAGAATGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: YPGGQDGRQTPT*RMSFLSSRMKS Trigger: GCTCTTCATTCTGCTGGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCCTGCCGTCCTGCCCACCTGGATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | GGCTGTGGCTGCTGTTGCCCTTTGTGTCTCCGAGAGTaGGAGCCCGGCTCCTTGCTGTTCTTCCTGGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GCGCCCPLCLRE*EPGSLLFFLAG Trigger: TCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | TGTGAGTGGCCCTGTTGTCCCTGGCTGTGGCTGCTGTaGCCCTTTGTGTCTCCGAGAGTTGGAGCCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CEWPCCPWLWLL*PFVSPRVGARL Trigger: GAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCCACAGCCAGGGACAACAGGGCCACTCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | GTTGTCCCTGGCTGTGGCTGCTGTTGCCCTTTGTGTCTCCGAGAGTaGGAGCCCGGCTCCTTGCTGTTCTTCCTGGCCGGATGCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVPGCGCCCPLCLRE*EPGSLLFFLAGCLL Trigger: CAACAGGCATCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCCACAGCCAGGGACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 72 bp | GCTGTGGCTGCTGTTGCCCTTTGTGTCTCCGAGAGTTaGAGCCCGGCTCCTTGCTGTTCTTCCTGGCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AVAAVALCVSES*SPAPCCSSWPD Trigger: ATCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCCACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | GCAGGGTCCCCACGGGGACCACTCGCTCATTTCACATaGTGCAGGACTGCCGCACTCCATGGTGCTGTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSPRGPLAHFT*CRTAALHGAVS Trigger: GCTAACAGCACCATGGAGTGCGGCAGTCCTGCACAATGTGAAATGAGCGAGTGGTCCCCGTGGGGACCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | TCCGATCCCTTCCGGAAACCGCACAGCTTCCTCTTCTaGGAGCAGGGTCCCCACGGGGACCACTCGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: SDPFRKPHSFLF*EQGPHGDHSLI Trigger: AATGAGCGAGTGGTCCCCGTGGGGACCCTGCTCCAAGAAGAGGAAGCTGTGCGGTTTCCGGAAGGGATCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | GATGTGAGTGGCCCTGTTGTCCCTGGCTGTGGCTGCTGTTGCCCTTaGTGTCTCCGAGAGTTGGAGCCCGGCTCCTTGCTGTTCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DVSGPVVPGCGCCCP*CLRELEPGSLLFFL Trigger: CAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCAACAGCAGCCACAGCCAGGGACAACAGGGCCACTCACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS TCA 72 bp | GAGCTTGGGCGAGCACTTGAGGCAACCGTTGACTTCTaGACAGAGCTCACAGCCCTTGGCGCAGGCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ELGRALEATVDF*TELTALGAGLA Trigger: AGCCAAGCCTGCGCCAAGGGCTGTGAGCTCTGTTCAGAAGTCAACGGTTGCCTCAAGTGCTCGCCCAAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CCA 72 bp | ACTTCTGAACAGAGCTCACAGCCCTTGGCGCAGGCTTaGCTCCCCTCAGCACTGATCCGCCTCTGTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSEQSSQPLAQA*LPSALIRLCLL Trigger: CAAGAGACAGAGGCGGATCAGTGCTGAGGGGAGCCAAGCCTGCGCCAAGGGCTGTGAGCTCTGTTCAGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | TGCCCTTTGTGTCTCCGAGAGTTGGAGCCCGGCTCCTaGCTGTTCTTCCTGGCCGGATGCCTGTTGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: CPLCLRELEPGS*LFFLAGCLLAF Trigger: GAATGCCAACAGGCATCCGGCCAGGAAGAACAGCAAGGAGCCGGGCTCCAACTCTCGGAGACACAAAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | GTCCGCTCTTCCGATCCCTTCCGGAAACCGCACAGCTTCCTCTTCTaGGAGCAGGGTCCCCACGGGGACCACTCGCTCATTTCACATTGT | + |
|
Preference number: 6 (lower is better) Translates to: VRSSDPFRKPHSFLF*EQGPHGDHSLISHC Trigger: ACAATGTGAAATGAGCGAGTGGTCCCCGTGGGGACCCTGCTCCAAGAAGAGGAAGCTGTGCGGTTTCCGGAAGGGATCGGAAGAGCGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | CTCTCCAGCAGAATGAAGAGCTTGGGCGAGCACTTGAGGCAACCGTaGACTTCTGAACAGAGCTCACAGCCCTTGGCGCAGGCTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSRMKSLGEHLRQP*TSEQSSQPLAQAWL Trigger: GAGCCAAGCCTGCGCCAAGGGCTGTGAGCTCTGTTCAGAAGTCAACGGTTGCCTCAAGTGCTCGCCCAAGCTCTTCATTCTGCTGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 90 bp | ACGCCCACCTGGCGGATGTCGTTCCTCTCCAGCAGAATGAAGAGCTaGGGCGAGCACTTGAGGCAACCGTTGACTTCTGAACAGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPTWRMSFLSSRMKS*GEHLRQPLTSEQSS Trigger: TGAGCTCTGTTCAGAAGTCAACGGTTGCCTCAAGTGCTCGCCCAAGCTCTTCATTCTGCTGGAGAGGAACGACATCCGCCAGGTGGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | AGAATGAAGAGCTTGGGCGAGCACTTGAGGCAACCGTaGACTTCTGAACAGAGCTCACAGCCCTTGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RMKSLGEHLRQP*TSEQSSQPLAQ Trigger: CTGCGCCAAGGGCTGTGAGCTCTGTTCAGAAGTCAACGGTTGCCTCAAGTGCTCGCCCAAGCTCTTCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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| CDS CAA 72 bp | TGGCGGATGTCGTTCCTCTCCAGCAGAATGAAGAGCTaGGGCGAGCACTTGAGGCAACCGTTGACTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WRMSFLSSRMKS*GEHLRQPLTSE Trigger: TTCAGAAGTCAACGGTTGCCTCAAGTGCTCGCCCAAGCTCTTCATTCTGCTGGAGAGGAACGACATCCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030687.8 |
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