Pregenerated sensors for RSPH9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023966Ensembl transcript IDs: ENSMUST00000024762.3, ENSMUST00000148581.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGCAGGAGAAGCCTAGGGTTCAGATATTTTATTGTGGCTTGTTaGGGAAGGAAGACAGGATCCAGCAGAAACAGCAAACCGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: RGRRSLGFRYFIVAC*GRKTGSSRNSKPFL Trigger: CAAGAACGGTTTGCTGTTTCTGCTGGATCCTGTCTTCCTTCCTCAACAAGCCACAATAAAATATCTGAACCCTAGGCTTCTCCTGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148581.8 |
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| 3UTR CAA 90 bp | CAGAGGCAGGAGAAGCCTAGGGTTCAGATATTTTATTGTGGCTTGTaGAGGAAGGAAGACAGGATCCAGCAGAAACAGCAAACCGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: QRQEKPRVQIFYCGL*RKEDRIQQKQQTVL Trigger: AAGAACGGTTTGCTGTTTCTGCTGGATCCTGTCTTCCTTCCTCAACAAGCCACAATAAAATATCTGAACCCTAGGCTTCTCCTGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148581.8 |
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| CDS-3UTR TCA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCAAGGGACGTGAGCAGTaGGGCCCGACGGTCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TVELYERVFRPHINIQPAKGREQ*GPTVRA Trigger: AGCCCTGACCGTCGGGCCTCACTGCTCACGTCCCTT...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR TCA 90 bp | AGGATCCAGCAGAAACAGCAAACCGTTCTTGTAGTTCAGCAGTTCTCAACCTGTCTCCAAAAGGGGTCTTaGAGAGGGCACCTCGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RIQQKQQTVLVVQQFSTCLQKGS*RGHLEG Trigger: TCCCTCGAGGTGCCCTCTTCAAGACCCCTTTTGGAG...ACAGGTTGAGAACTGCTGAACTACAAGAACGGTTTGCTGTTTCTGCTGGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148581.8 |
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| CDS-3UTR GCA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCTCAGGGCTGAGTCCCTaGCCACTGCCAGACGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: TVELYERVFRPHINIQPASGLSP*PLPDAN Trigger: GTTGGCGTCTGGCAGTGGGCAGGGACTCAGCCCTGA...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | CCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTCTGGCCAGAGCAGGCTaGGCAGCACCACCAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: PTVELYERVFRPHINIQPLARAG*AAPPVR Trigger: ACGCACTGGTGGTGCTGCGCAGCCTGCTCTGGCCAG...AGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | TCTTGTAGTTCAGCAGTTCTCAACCTGTGGGTCTCCACCCCCAGAAGACCATCAAAGGTCCGATTGACATaGGTGACTCCAAAAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SCSSAVLNLWVSTPRRPSKVRLT*VTPKGV Trigger: GACCCCTTTTGGAGTCACCCATGTCAATCGGACCTT...TGATGGTCTTCTGGGGGTGGAGACCCACAGGTTGAGAACTGCTGAACTACAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148581.8 |
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| CDS-3UTR CCA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCGTAGAAGGTGAGGCCTaGCCAGAGCAGGCTGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TVELYERVFRPHINIQPAVEGEA*PEQAAQ Trigger: CTGCGCAGCCTGCTCTGGCCAGGCCTCACCTTCTAC...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCACAAGGCCAAGGATaGGGCCCCAGAAAAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GPTVELYERVFRPHINIQPQGQG*GPRKGP Trigger: GGGTCCTTTTCTGGGGCCGCATCCTTGGCCTTGTGG...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCGGCTGTAGAGCGTCTTaGGTGGTGCGAGCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVELYERVFRPHINIQPAGCRAS*VVRAGP Trigger: AGGACCAGCTCGCACCACGCAAGACGCTCTACAGCC...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGGCGCAGCACCACCAGTaGGTTGCCCCTTTCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: GPTVELYERVFRPHINIQAQHHQ*VAPFHL Trigger: CAGATGGAAAGGGGCAACGCACTGGTGGTGCTGCGC...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR TCA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCTCCAAAAGGGGTCTTaGAGAGGGCACCTCGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GPTVELYERVFRPHINIQLQKGS*RGHLEG Trigger: TCCCTCGAGGTGCCCTCTTCAAGACCCCTTTTGGAG...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGGCACCACCAGTGCGTTaGCCCTTTCCATCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: GPTVELYERVFRPHINIQAPPVR*PFPSGC Trigger: GCATCCAGATGGAAAGGGGCAACGCACTGGTGGTGC...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCTTGCGTGGTGCGAGCTaGTCCTCACTCAAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TVELYERVFRPHINIQPALRGAS*SSLKPC Trigger: ACAGGGCTTGAGTGAGGACCAGCTCGCACCACGCAA...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | CCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGTAGAGCGTCTTGCGTaGTGCGAGCTGGTCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: PTVELYERVFRPHINIQPVERLA*CELVLT Trigger: AGTGAGGACCAGCTCGCACCACGCAAGACGCTCTAC...AGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCTGGCCATCTCCTCTGTaGCAGGGGGCAAGAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINIWPSPL*QGARDS Trigger: GGAGTCTCTTGCCCCCTGCCACAGAGGAGATGGCCA...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCGAGCGTCTTGCGTGGTaGGAGCTGGTCCTCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINIERLAW*ELVLTQ Trigger: TTGAGTGAGGACCAGCTCGCACCACGCAAGACGCTC...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCCTCACCACAGATATCTaGATGGCCATCTCCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TVELYERVFRPHINIQPALTTDI*MAISSV Trigger: CACAGAGGAGATGGCCATGCAGATATCTGTGGTGAG...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCCCTTTCCATCTGGATaGTCCAAGACCCTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINIPFPSG*SKTLWG Trigger: TCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGG...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| 3UTR CAA 72 bp | CAGGAGAAGCCTAGGGTTCAGATATTTTATTGTGGCTaGTTGAGGAAGGAAGACAGGATCCAGCAGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: QEKPRVQIFYCG*LRKEDRIQQKQ Trigger: CTGTTTCTGCTGGATCCTGTCTTCCTTCCTCAACAAGCCACAATAAAATATCTGAACCCTAGGCTTCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148581.8 |
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| CDS-3UTR TCA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGTGTCAATCTGGTCAATaGTGGACACCAAGCGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GPTVELYERVFRPHINIQCQSGQ*WTPSES Trigger: AGACTCGCTTGGTGTCCATCATTGACCAGATTGACA...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCTCACTCAAGCCCTGTaGGATGTAGTAATCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINILTQAL*DVVIRH Trigger: GTGGCGGATTACTACATCGCACAGGGCTTGAGTGAG...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCAGAGACTCCACTCTGTaGAGTTCAGGCTGTAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINIRDSTL*SSGCRA Trigger: CGCTCTACAGCCTGAACTGCACAGAGTGGAGTCTCT...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCAGCCATAGTTCTTGGTaGGAGGAGCGTGGTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINISHSSW*EERGRR Trigger: CCTTCTACCACGCTCCTCGCACCAAGAACTATGGCT...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCCACAGATATCTGCATaGCCATCTCCTCTGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINIPQISA*PSPLWQ Trigger: CTGCCACAGAGGAGATGGCCATGCAGATATCTGTGG...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | CCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTAAGGTCCGATTGACATaGGTGACTCCAAAAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PTVELYERVFRPHINIQPKVRLT*VTPKGV Trigger: GACCCCTTTTGGAGTCACCCATGTCAATCGGACCTT...AGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCTTGCCCCTTTCCATCTaGATGCTCCAAGACCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KGPTVELYERVFRPHINILPLSI*MLQDPL Trigger: CAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAA...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | CCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTTGTAGCCATAGTTCTTaGTGCGAGGAGCGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: PTVELYERVFRPHINIQPCSHSS*CEERGR Trigger: TCTACCACGCTCCTCGCACCAAGAACTATGGCTACA...AGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CCA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGACAGCCTTGTCAATCTaGTCAATGATGGACACCAAG | + |
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Preference number: 4 (lower is better) Translates to: GPTVELYERVFRPHINIQTALSI*SMMDTK Trigger: CTTGGTGTCCATCATTGACCAGATTGACAAGGCTGT...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCCCTTCGTTAACCTTCTaGAACTCTGTGTGTTCATAC | + |
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Preference number: 4 (lower is better) Translates to: TVELYERVFRPHINIQPAPSLTF*NSVCSY Trigger: GTATGAACACACAGAGTTGCAGAAGGTTAACGAAGG...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR GCA 90 bp | CCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTTGTTCTTCTCTCCTGTaGCTACGTAGATGTAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PTVELYERVFRPHINIQPCSSLL*LRRCSH Trigger: ATGGCTACATCTACGTAGGCACAGGAGAGAAGAACA...AGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 90 bp | ATAAGGGACGTGAGCAGTGAGGCCCGACGGTCAGGGCTGAGTCCCTaGCCACTGCCAGACGCCAACTCCAGAGACAACAAGAGGCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: IRDVSSEARRSGLSP*PLPDANSRDNKRLS Trigger: CGACAGCCTCTTGTTGTCTCTGGAGTTGGCGTCTGGCAGTGGGCAGGGACTCAGCCCTGACCGTCGGGCCTCACTGCTCACGTCCCTTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 90 bp | GTAGAGCGTCTTGCGTGGTGCGAGCTGGTCCTCACTCAAGCCCTGTaGGATGTAGTAATCCGCCACAAGGCCAAGGATGCGGCCCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: VERLAWCELVLTQAL*DVVIRHKAKDAAPE Trigger: TTCTGGGGCCGCATCCTTGGCCTTGTGGCGGATTACTACATCGCACAGGGCTTGAGTGAGGACCAGCTCGCACCACGCAAGACGCTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 90 bp | GCAGGCTGCGCAGCACCACCAGTGCGTTGCCCCTTTCCATCTGGATaGTCCAAGACCCTCTGGGGATGTCATATTCCAGGGAGTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: AGCAAPPVRCPFPSG*SKTLWGCHIPGSPG Trigger: TCCTGGACTCCCTGGAATATGACATCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAACGCACTGGTGGTGCTGCGCAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 90 bp | CAGAGCAGGCTGCGCAGCACCACCAGTGCGTTGCCCCTTTCCATCTaGATGCTCCAAGACCCTCTGGGGATGTCATATTCCAGGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: QSRLRSTTSALPLSI*MLQDPLGMSYSRES Trigger: GGACTCCCTGGAATATGACATCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAACGCACTGGTGGTGCTGCGCAGCCTGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 90 bp | CACTCAAGCCCTGTGCGATGTAGTAATCCGCCACAAGGCCAAGGATaGGGCCCCAGAAAAGGACCCTCGCGAAGCGGTAATCGCGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HSSPVRCSNPPQGQG*GPRKGPSRSGNRAS Trigger: TGAAGCGCGATTACCGCTTCGCGAGGGTCCTTTTCTGGGGCCGCATCCTTGGCCTTGTGGCGGATTACTACATCGCACAGGGCTTGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 90 bp | CCACCAGTGCGTTGCCCCTTTCCATCTGGATGCTCCAAGACCCTCTaGGGATGTCATATTCCAGGGAGTCCAGGAAATCCAGCGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PPVRCPFPSGCSKTL*GCHIPGSPGNPARA Trigger: AGCCCTCGCTGGATTTCCTGGACTCCCTGGAATATGACATCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAACGCACTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS TCA 90 bp | CCTTCTGCAACTCTGTGTGTTCATACTCGTGTGAAGGGTCGCCCATaGAACGGCCACTCACCACAGATATCTGCATGGCCATCTCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PSATLCVHTRVKGRP*NGHSPQISAWPSPL Trigger: CAGAGGAGATGGCCATGCAGATATCTGTGGTGAGTGGCCGTTTCATGGGCGACCCTTCACACGAGTATGAACACACAGAGTTGCAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 90 bp | TTCTCCAGCAAGGTCTTGTTCTTCAGATCAATAGCCTCCCTGAAGTaGAAGTACGAGCTAAGCTTCCTGACCTCGGACAGGGGCAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: FSSKVLFFRSIASLK*KYELSFLTSDRGRP Trigger: AGGCCTGCCCCTGTCCGAGGTCAGGAAGCTTAGCTCGTACTTCCACTTCAGGGAGGCTATTGATCTGAAGAACAAGACCTTGCTGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024762.3 ENSMUST00000148581.8 |
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| CDS-3UTR CAA 90 bp | ATCCAGCAGAAACAGCAAACCGTTCTTGTAGTTCAGCAGTTCTCAACCTGTGGGACTCCAAAAGGGGTCTaGAAGAGGGCACCTCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: IQQKQQTVLVVQQFSTCGTPKGV*KRAPRG Trigger: CCCTCGAGGTGCCCTCTTCAAGACCCCTTTTGGAGT...CCCACAGGTTGAGAACTGCTGAACTACAAGAACGGTTTGCTGTTTCTGCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148581.8 |
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| CDS CCA 90 bp | TTGAAGAGGGCACCTCGAGGGATGATAGCTACAGCCTTGTCAATCTaGTCAATGATGGACACCAAGCGAGTCTCTTCCTTGATCTGGACC | + |
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Preference number: 5 (lower is better) Translates to: LKRAPRGMIATALSI*SMMDTKRVSSLIWT Trigger: GGTCCAGATCAAGGAAGAGACTCGCTTGGTGTCCATCATTGACCAGATTGACAAGGCTGTAGCTATCATCCCTCGAGGTGCCCTCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS TCA 90 bp | CTCTCCTTCGTTAACCTTCTGCAACTCTGTGTGTTCATACTCGTGTaGAGGGTCGCCCATGAAACGGCCACTCACCACAGATATCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LSFVNLLQLCVFILV*RVAHETATHHRYLH Trigger: ATGCAGATATCTGTGGTGAGTGGCCGTTTCATGGGCGACCCTTCACACGAGTATGAACACACAGAGTTGCAGAAGGTTAACGAAGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CAA 90 bp | TGTAGTTCAGCAGTTCTCAACCTGTGGGTCTCCACCCCCAGAAGACCATCAGGATTCTCCAGCAAGGTCTaGTTCTTCAGATCAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: CSSAVLNLWVSTPRRPSGFSSKV*FFRSIA Trigger: GGCTATTGATCTGAAGAACAAGACCTTGCTGGAGAA...TCCTGATGGTCTTCTGGGGGTGGAGACCCACAGGTTGAGAACTGCTGAACTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148581.8 |
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| CDS-3UTR CAA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGACTCCAAAAGGGGTCTaGAAGAGGGCACCTCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GPTVELYERVFRPHINIQTPKGV*KRAPRG Trigger: CCCTCGAGGTGCCCTCTTCAAGACCCCTTTTGGAGT...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 90 bp | ACCACCACTTCTTCATCAAAGACCTTCTCTCCTTCGTTAACCTTCTaGAACTCTGTGTGTTCATACTCGTGTGAAGGGTCGCCCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: TTTSSSKTFSPSLTF*NSVCSYSCEGSPMK Trigger: TTTCATGGGCGACCCTTCACACGAGTATGAACACACAGAGTTGCAGAAGGTTAACGAAGGAGAGAAGGTCTTTGATGAAGAAGTGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 90 bp | TCAATCTGGTCAATGATGGACACCAAGCGAGTCTCTTCCTTGATCTaGACCACCACTTCTTCATCAAAGACCTTCTCTCCTTCGTTAACC | + |
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Preference number: 5 (lower is better) Translates to: SIWSMMDTKRVSSLI*TTTSSSKTFSPSLT Trigger: GGTTAACGAAGGAGAGAAGGTCTTTGATGAAGAAGTGGTGGTCCAGATCAAGGAAGAGACTCGCTTGGTGTCCATCATTGACCAGATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CAA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTTCAAAGGTCCGATaGACATGGGTGACTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: GPTVELYERVFRPHINIQPSKVR*TWVTPK Trigger: TTTTGGAGTCACCCATGTCAATCGGACCTTTGAAGG...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CAA 90 bp | AAAGGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCAAGCGAGTCTCTTCCTaGATCTGGACCACCACTTCT | + |
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Preference number: 5 (lower is better) Translates to: KGPTVELYERVFRPHINIKRVSS*IWTTTS Trigger: AGAAGTGGTGGTCCAGATCAAGGAAGAGACTCGCTT...GATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CAA 90 bp | ACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGCCTGCCTTCTCCAGCAAGGTCTaGTTCTTCAGATCAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: TVELYERVFRPHINIQPAFSSKV*FFRSIA Trigger: GGCTATTGATCTGAAGAACAAGACCTTGCTGGAGAA...GGCAGGCTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS-3UTR CAA 90 bp | GGCCCAACAGTTGAACTTTATGAAAGAGTGTTTCGACCCCACATAAATATCCAGATGATAGCTACAGCCTaGTCAATCTGGTCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: GPTVELYERVFRPHINIQMIATA*SIWSMM Trigger: CATCATTGACCAGATTGACAAGGCTGTAGCTATCAT...CTGGATATTTATGTGGGGTCGAAACACTCTTTCATAAAGTTCAACTGTTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS TCA 72 bp | GTAATCGCGCTTCACCAGCATAAGGGACGTGAGCAGTaGGGCCCGACGGTCAGGGCTGAGTCCCTGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: VIALHQHKGREQ*GPTVRAESLPT Trigger: AGTGGGCAGGGACTCAGCCCTGACCGTCGGGCCTCACTGCTCACGTCCCTTATGCTGGTGAAGCGCGATTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 72 bp | CTTGCGTGGTGCGAGCTGGTCCTCACTCAAGCCCTGTaGGATGTAGTAATCCGCCACAAGGCCAAGGATGCG | + |
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Preference number: 6 (lower is better) Translates to: LAWCELVLTQAL*DVVIRHKAKDA Trigger: CGCATCCTTGGCCTTGTGGCGGATTACTACATCGCACAGGGCTTGAGTGAGGACCAGCTCGCACCACGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 72 bp | GACTCCACTCTGTGCAGTTCAGGCTGTAGAGCGTCTTaGGTGGTGCGAGCTGGTCCTCACTCAAGCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: DSTLCSSGCRAS*VVRAGPHSSPV Trigger: CACAGGGCTTGAGTGAGGACCAGCTCGCACCACGCAAGACGCTCTACAGCCTGAACTGCACAGAGTGGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 72 bp | TCTCCTCTGTGGCAGGGGGCAAGAGACTCCACTCTGTaGAGTTCAGGCTGTAGAGCGTCTTGCGTGGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: SPLWQGARDSTL*SSGCRASCVVR Trigger: TCGCACCACGCAAGACGCTCTACAGCCTGAACTGCACAGAGTGGAGTCTCTTGCCCCCTGCCACAGAGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 72 bp | CCACTCTGTGCAGTTCAGGCTGTAGAGCGTCTTGCGTaGTGCGAGCTGGTCCTCACTCAAGCCCTGTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: PLCAVQAVERLA*CELVLTQALCD Trigger: ATCGCACAGGGCTTGAGTGAGGACCAGCTCGCACCACGCAAGACGCTCTACAGCCTGAACTGCACAGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 72 bp | CCTGTGCGATGTAGTAATCCGCCACAAGGCCAAGGATaGGGCCCCAGAAAAGGACCCTCGCGAAGCGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: PVRCSNPPQGQG*GPRKGPSRSGN Trigger: ATTACCGCTTCGCGAGGGTCCTTTTCTGGGGCCGCATCCTTGGCCTTGTGGCGGATTACTACATCGCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 72 bp | CTCTGTGCAGTTCAGGCTGTAGAGCGTCTTGCGTGGTaGGAGCTGGTCCTCACTCAAGCCCTGTGCGATGTA | + |
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Preference number: 6 (lower is better) Translates to: LCAVQAVERLAW*ELVLTQALCDV Trigger: TACATCGCACAGGGCTTGAGTGAGGACCAGCTCGCACCACGCAAGACGCTCTACAGCCTGAACTGCACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 72 bp | GCAGCACCACCAGTGCGTTGCCCCTTTCCATCTGGATaGTCCAAGACCCTCTGGGGATGTCATATTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AAPPVRCPFPSG*SKTLWGCHIPG Trigger: CCCTGGAATATGACATCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAACGCACTGGTGGTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 72 bp | CTGCGCAGCACCACCAGTGCGTTGCCCCTTTCCATCTaGATGCTCCAAGACCCTCTGGGGATGTCATATTCC | + |
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Preference number: 6 (lower is better) Translates to: LRSTTSALPLSI*MLQDPLGMSYS Trigger: GGAATATGACATCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAACGCACTGGTGGTGCTGCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 72 bp | CACTCACCACAGATATCTGCATGGCCATCTCCTCTGTaGCAGGGGGCAAGAGACTCCACTCTGTGCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HSPQISAWPSPL*QGARDSTLCSS Trigger: TGAACTGCACAGAGTGGAGTCTCTTGCCCCCTGCCACAGAGGAGATGGCCATGCAGATATCTGTGGTGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 72 bp | CGTTGCCCCTTTCCATCTGGATGCTCCAAGACCCTCTaGGGATGTCATATTCCAGGGAGTCCAGGAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: RCPFPSGCSKTL*GCHIPGSPGNP Trigger: TGGATTTCCTGGACTCCCTGGAATATGACATCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CAA 72 bp | AAGGTCCGATTGACATGGGTGACTCCAAAAGGGGTCTaGAAGAGGGCACCTCGAGGGATGATAGCTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: KVRLTWVTPKGV*KRAPRGMIATA Trigger: GGCTGTAGCTATCATCCCTCGAGGTGCCCTCTTCAAGACCCCTTTTGGAGTCACCCATGTCAATCGGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024762.3 ENSMUST00000148581.8 |
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| CDS TCA 72 bp | ACTCTGTGTGTTCATACTCGTGTGAAGGGTCGCCCATaGAACGGCCACTCACCACAGATATCTGCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLCVHTRVKGRP*NGHSPQISAWP Trigger: TGGCCATGCAGATATCTGTGGTGAGTGGCCGTTTCATGGGCGACCCTTCACACGAGTATGAACACACAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CAA 72 bp | AGCGAGGGCTCCAAGTCCGACTTCTCCAGCAAGGTCTaGTTCTTCAGATCAATAGCCTCCCTGAAGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SEGSKSDFSSKV*FFRSIASLKWK Trigger: CTTCCACTTCAGGGAGGCTATTGATCTGAAGAACAAGACCTTGCTGGAGAAGTCGGACTTGGAGCCCTCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024762.3 ENSMUST00000148581.8 |
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| CDS CAA 90 bp | AGGCCTTCAAAGGTCCGATTGACATGGGTGACTCCAAAAGGGGTCTaGAAGAGGGCACCTCGAGGGATGATAGCTACAGCCTTGTCAATC | + |
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Preference number: 6 (lower is better) Translates to: RPSKVRLTWVTPKGV*KRAPRGMIATALSI Trigger: GATTGACAAGGCTGTAGCTATCATCCCTCGAGGTGCCCTCTTCAAGACCCCTTTTGGAGTCACCCATGTCAATCGGACCTTTGAAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024762.3 ENSMUST00000148581.8 |
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| CDS CAA 90 bp | AAAGGGGTCTTGAAGAGGGCACCTCGAGGGATGATAGCTACAGCCTaGTCAATCTGGTCAATGATGGACACCAAGCGAGTCTCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KGVLKRAPRGMIATA*SIWSMMDTKRVSSL Trigger: CAAGGAAGAGACTCGCTTGGTGTCCATCATTGACCAGATTGACAAGGCTGTAGCTATCATCCCTCGAGGTGCCCTCTTCAAGACCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CAA 90 bp | AGGAAATCCAGCGAGGGCTCCAAGTCCGACTTCTCCAGCAAGGTCTaGTTCTTCAGATCAATAGCCTCCCTGAAGTGGAAGTACGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: RKSSEGSKSDFSSKV*FFRSIASLKWKYEL Trigger: TAGCTCGTACTTCCACTTCAGGGAGGCTATTGATCTGAAGAACAAGACCTTGCTGGAGAAGTCGGACTTGGAGCCCTCGCTGGATTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024762.3 ENSMUST00000148581.8 |
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| CDS TCA 72 bp | GTTAACCTTCTGCAACTCTGTGTGTTCATACTCGTGTaGAGGGTCGCCCATGAAACGGCCACTCACCACAGA | + |
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Preference number: 6 (lower is better) Translates to: VNLLQLCVFILV*RVAHETATHHR Trigger: TCTGTGGTGAGTGGCCGTTTCATGGGCGACCCTTCACACGAGTATGAACACACAGAGTTGCAGAAGGTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 72 bp | GCACCTCGAGGGATGATAGCTACAGCCTTGTCAATCTaGTCAATGATGGACACCAAGCGAGTCTCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: APRGMIATALSI*SMMDTKRVSSL Trigger: CAAGGAAGAGACTCGCTTGGTGTCCATCATTGACCAGATTGACAAGGCTGTAGCTATCATCCCTCGAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CAA 72 bp | TTGAAGAGGGCACCTCGAGGGATGATAGCTACAGCCTaGTCAATCTGGTCAATGATGGACACCAAGCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: LKRAPRGMIATA*SIWSMMDTKRV Trigger: GACTCGCTTGGTGTCCATCATTGACCAGATTGACAAGGCTGTAGCTATCATCCCTCGAGGTGCCCTCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CCA 72 bp | AAGGTCTTGTTCTTCAGATCAATAGCCTCCCTGAAGTaGAAGTACGAGCTAAGCTTCCTGACCTCGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: KVLFFRSIASLK*KYELSFLTSDR Trigger: CCTGTCCGAGGTCAGGAAGCTTAGCTCGTACTTCCACTTCAGGGAGGCTATTGATCTGAAGAACAAGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024762.3 ENSMUST00000148581.8 |
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| CDS CAA 90 bp | GCCTTGTCAATCTGGTCAATGATGGACACCAAGCGAGTCTCTTCCTaGATCTGGACCACCACTTCTTCATCAAAGACCTTCTCTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: ALSIWSMMDTKRVSS*IWTTTSSSKTFSPS Trigger: CGAAGGAGAGAAGGTCTTTGATGAAGAAGTGGTGGTCCAGATCAAGGAAGAGACTCGCTTGGTGTCCATCATTGACCAGATTGACAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS CAA 72 bp | ATCTGGTCAATGATGGACACCAAGCGAGTCTCTTCCTaGATCTGGACCACCACTTCTTCATCAAAGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: IWSMMDTKRVSS*IWTTTSSSKTF Trigger: GAAGGTCTTTGATGAAGAAGTGGTGGTCCAGATCAAGGAAGAGACTCGCTTGGTGTCCATCATTGACCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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| CDS GCA 72 bp | TCTTCATCAAAGACCTTCTCTCCTTCGTTAACCTTCTaGAACTCTGTGTGTTCATACTCGTGTGAAGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SSSKTFSPSLTF*NSVCSYSCEGS Trigger: CGACCCTTCACACGAGTATGAACACACAGAGTTGCAGAAGGTTAACGAAGGAGAGAAGGTCTTTGATGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024762.3 |
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