Pregenerated sensors for RSPH4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039552Ensembl transcript IDs: ENSMUST00000169670.8
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTaGTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACTC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCVCVCV*FTGACYPDQAGFGL Trigger: GAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACACACACACACACACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTTTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTaGCTTTGGACTCATAGAAATCTTCCTCCCTCTGCCTCCCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: VCVCLLHWSLLSRPG*LWTHRNLPPSASQV Trigger: TACTTGGGAGGCAGAGGGAGGAAGATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 90 bp | GGAAGATTTACTTGTGTTAGCAAACATGCACATGTGCTGTGCCTGTaGAGGATAGAAGAGAGCATTAGATTTCCTAGACTTGGAGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: GRFTCVSKHAHVLCL*RIEESIRFPRLGVA Trigger: TGCAACTCCAAGTCTAGGAAATCTAATGCTCTCTTCTATCCTCCACAGGCACAGCACATGTGCATGTTTGCTAACACAAGTAAATCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR GCA 90 bp | TTATGGAATTGTGAACACTCACCCAGGAAAGAGAATGCGTGCACATaGACAGTATTTATACACAGTTTCATTGGCTTCAGCACAAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: LWNCEHSPRKENACT*TVFIHSFIGFSTSN Trigger: GTTGCTTGTGCTGAAGCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR GCA 90 bp | CTTTTTGGAAGATTTACTTGTGTTAGCAAACATGCACATGTGCTGTaGCTGTGGAGGATAGAAGAGAGCATTAGATTTCCTAGACTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LFGRFTCVSKHAHVL*LWRIEESIRFPRLG Trigger: TCCAAGTCTAGGAAATCTAATGCTCTCTTCTATCCTCCACAGGCACAGCACATGTGCATGTTTGCTAACACAAGTAAATCTTCCAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR TCA 90 bp | AAACATTTGAATGCCCTTACAGGTTTTATTCCACTTATGGAATTGTaGACACTCACCCAGGAAAGAGAATGCGTGCACATGCACAGTATT | + |
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Preference number: 1 (lower is better) Translates to: KHLNALTGFIPLMEL*TLTQERECVHMHSI Trigger: AATACTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAAGTGGAATAAAACCTGTAAGGGCATTCAAATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 90 bp | TGTGGTGAGCTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTaGCAGTTCTATATACAGTTTCCAATATCATTCGTGTTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: CGELLENPLATFCKY*QFYIQFPISFVLCV Trigger: CACACACAACACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAGCTCACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 90 bp | AGAGGTTTGTTTATGAGTATTTTGCATGTGTGTGTGTGTTACACATaGATGTCAGAAAGGGATACTAGATCCCTTAGAACTGATGATTTC | + |
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Preference number: 1 (lower is better) Translates to: RGLFMSILHVCVCYT*MSERDTRSLRTDDF Trigger: GAAATCATCAGTTCTAAGGGATCTAGTATCCCTTTCTGACATCCATGTGTAACACACACACACATGCAAAATACTCATAAACAAACCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTaGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACT | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCVCVCVC*LHWSLLSRPGWLWT Trigger: AGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACACACACACACACACACACACACACACACACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTATGGAATTGTGAACACTCACCCAGGAAAGAGAATGCGTGCACATGCACAGAGAGGCCTCTCTATGTaGTTTTATAGCCAACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TYGIVNTHPGKRMRAHAQRGLSM*FYSQPG Trigger: ACCAGGTTGGCTATAAAATCACATAGAGAGGCCTCT...CTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR CCA 90 bp | AACGGTGATGTGGTGAGCTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTATAGGTCCTAGCAACTaGATTCCTGTCCTCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: NGDVVSFWKIHWLLSVNTIGPSN*IPVLRA Trigger: TGCTCTGAGGACAGGAATCCAGTTGCTAGGACCTAT...AGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAGCTCACCACATCACCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR CCA 90 bp | AACGGTGATGTGGTGAGCTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTCATGTGCTGTGCCTGTaGAGGATAGAAGAGAGCATT | + |
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Preference number: 2 (lower is better) Translates to: NGDVVSFWKIHWLLSVNTHVLCL*RIEESI Trigger: AATGCTCTCTTCTATCCTCCACAGGCACAGCACATG...AGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAGCTCACCACATCACCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR GCA 90 bp | AACGGTGATGTGGTGAGCTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTGTGTGTGTGTGTGTTTaGTTCACTGGAGCTTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: NGDVVSFWKIHWLLSVNTVCVCV*FTGACY Trigger: ATAGCAAGCTCCAGTGAAGCAAACACACACACACAC...AGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAGCTCACCACATCACCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTAGAACTGATGATTTCAAGCTATCATGTGGATGCTGGGAATCGAACCCAGGCATTCTATATCCCTTaGCACTCAAAAACTGGAATT | + |
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Preference number: 2 (lower is better) Translates to: PLELMISSYHVDAGNRTQAFYIP*HSKTGI Trigger: AATTCCAGTTTTTGAGTGTCAAGGGATATAGAATGC...CTGGGTTCGATTCCCAGCATCCACATGATAGCTTGAAATCATCAGTTCTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CAA 90 bp | TGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CKYWQFYIQFPISFV*CVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACACACAACACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAAGATGTGGTGAGCTTCTaGAAAATCCACTGGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: VPGQPELYSLTLSRRKRKDVVSF*KIHWLL Trigger: AAGTAGCCAGTGGATTTTCCAGAAGCTCACCACATC...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CAA 90 bp | GGAAAGAGAATGCGTGCACATGCACAGTATTTATACACAGTTTCATaGGCTTCAGCACAAGCAACTACAGATTTAATACATCTCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: GKRMRAHAQYLYTVS*ASAQATTDLIHLHP Trigger: TGGATGGAGATGTATTAAATCTGTAGTTGCTTGTGCTGAAGCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR GCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGAAATCTTCCTCCCTCTaGCTCCCAAGTATTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: ATFCKYWQFYIQFPISFVKSSSL*LPSIGV Trigger: AACCCCAATACTTGGGAGGCAGAGGGAGGAAGATTT...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAAAGAGAATGCGTGCACATGCACAGTATTTATACACAGTTTCATTGGCTTCTGGAAAATCCACTaGCTACTTTCTGTAAATACT | + |
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Preference number: 2 (lower is better) Translates to: PRKENACTCTVFIHSFIGFWKIH*LLSVNT Trigger: AGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAA...GCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR TCA 90 bp | CAATACTTGCCATGTTGGAAATTAACTTTGAACATTCACACCTTCAATCCTAGCTATTCATTAAAACGGTaGTGTGGTGAGCTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: QYLPCWKLTLNIHTFNPSYSLKR*CGELLE Trigger: TTCCAGAAGCTCACCACATCACCGTTTTAATGAATA...GCTAGGATTGAAGGTGTGAATGTTCAAAGTTAATTTCCAACATGGCAAGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 72 bp | CTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTaGACTCATAGAAATCTTCCTCCCTCTGCCTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LHWSLLSRPGWL*THRNLPPSASQ Trigger: TTGGGAGGCAGAGGGAGGAAGATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 72 bp | TGTTTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTaGCTTTGGACTCATAGAAATCTTCCTCCCTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: CLLHWSLLSRPG*LWTHRNLPPSA Trigger: GGCAGAGGGAGGAAGATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCTTCACTaGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCLLH*SLLSRPGWLWT Trigger: AGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACACACACACACACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTTTGCTTCACTGGAGCTTaGTATCCAGACCAGGCTGGCTTTGGACTCATAGAA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCFTGA*YPDQAGFGLIE Trigger: TTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACACACACACACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR CAA 90 bp | TTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACTCATAGAAATTCTGCCTCCCAAGTATaGGGGTTAAAGGTTTATTTC | + |
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Preference number: 3 (lower is better) Translates to: LLHWSLLSRPGWLWTHRNSASQV*GLKVYF Trigger: GAAATAAACCTTTAACCCCAATACTTGGGAGGCAGA...ATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTAGAACTGATGATTTCAAGCTATCATGTGGATGCTGGGAATCGAACCCAGCCAATATCATTCGTGTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PLELMISSYHVDAGNRTQPISFV*CVCVCV Trigger: CACACACACACACACACACAACACGAATGATATTGG...CTGGGTTCGATTCCCAGCATCCACATGATAGCTTGAAATCATCAGTTCTAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGCCAGAATTATATAGTTaGACCCTGTCAAGGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKPELYS*TLSRRK Trigger: TTTTCTCCTTGACAGGGTCAAACTATATAATTCTGG...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR GCA 72 bp | TGTGAACACTCACCCAGGAAAGAGAATGCGTGCACATaGACAGTATTTATACACAGTTTCATTGGCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: CEHSPRKENACT*TVFIHSFIGFS Trigger: GCTGAAGCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR TCA 72 bp | AATGCCCTTACAGGTTTTATTCCACTTATGGAATTGTaGACACTCACCCAGGAAAGAGAATGCGTGCACATG | + |
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Preference number: 3 (lower is better) Translates to: NALTGFIPLMEL*TLTQERECVHM Trigger: CATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAAGTGGAATAAAACCTGTAAGGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR GCA 72 bp | TGGAATTGTGAACACTCACCCAGGAAAGAGAATGCGTaGACATGCACAGTATTTATACACAGTTTCATTGGC | + |
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Preference number: 3 (lower is better) Translates to: WNCEHSPRKENA*TCTVFIHSFIG Trigger: GCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 72 bp | ACTTGTGTTAGCAAACATGCACATGTGCTGTGCCTGTaGAGGATAGAAGAGAGCATTAGATTTCCTAGACTT | + |
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Preference number: 3 (lower is better) Translates to: TCVSKHAHVLCL*RIEESIRFPRL Trigger: AAGTCTAGGAAATCTAATGCTCTCTTCTATCCTCCACAGGCACAGCACATGTGCATGTTTGCTAACACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 72 bp | CTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTaGCAGTTCTATATACAGTTTCCAATATCATTCGTG | + |
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Preference number: 3 (lower is better) Translates to: LLENPLATFCKY*QFYIQFPISFV Trigger: CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CCA 72 bp | TTTATGAGTATTTTGCATGTGTGTGTGTGTTACACATaGATGTCAGAAAGGGATACTAGATCCCTTAGAACT | + |
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Preference number: 3 (lower is better) Translates to: FMSILHVCVCYT*MSERDTRSLRT Trigger: AGTTCTAAGGGATCTAGTATCCCTTTCTGACATCCATGTGTAACACACACACACATGCAAAATACTCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR TCA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGGACATGGGTCCCTGCTaGAATGCGGGCAATTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKDMGPC*NAGNLC Trigger: GCACAAATTGCCCGCATTTCAGCAGGGACCCATGTC...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGAAAGAGAATGCGTGCACATGCACAGTATTTATACACAGTTTCATTGGCGGGGCTCATTCTGGGTaGGGGTTCGGTGTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PRKENACTCTVFIHSFIGGAHSG*GFGVCP Trigger: AGGACAGACACCGAACCCGCACCCAGAATGAGCCCC...GCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CCA 90 bp | ACTTATGGAATTGTGAACACTCACCCAGGAAAGAGAATGCGTGCACATGCACAGTCTGGGCTGCTTCACTaGCTCCAACCTCAGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TYGIVNTHPGKRMRAHAQSGLLH*LQPQAG Trigger: ACCAGCCTGAGGTTGGAGCCAGTGAAGCAGCCCAGA...CTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR GCA 90 bp | TTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACTCATAGAAATAAGCATACTCTGGGCTaGTTCACTGGCTCCAACCTC | + |
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Preference number: 4 (lower is better) Translates to: LLHWSLLSRPGWLWTHRNKHTLG*FTGSNL Trigger: GAGGTTGGAGCCAGTGAAGCAGCCCAGAGTATGCTT...ATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTTTGCTTCACTGGAGCTaGCTATCCAGACCAGGCTGGCTTTGGACTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCLLHWS*LSRPGWLWTHR Trigger: TCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACACACACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR GCA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGGATTTAAGCCAGACTTaGTGCTGGTACTCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKDLSQT*CWYSAG Trigger: ACCTGCTGAGTACCAGCAGCAAGTCTGGCTTAAATC...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTTTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGCTGATTCCATCACATTaGGCAGAGAACTTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVFASLELAIQTRLLIPSH*AENFLP Trigger: TGGCAGAAAGTTCTCTGCCCAATGTGATGGAATCAG...CAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAAACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CCA 90 bp | AGCATTAGATTTCCTAGACTTGGAGTTGCAGGTAGTGGTAAGCCCCCTGACATAAACTGGTGGTGGGCTTaGGGGTGTGTAATTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SIRFPRLGVAGSGKPPDINWWWA*GCVILH Trigger: GTGGAGAATTACACACCCCCAAGCCCACCACCAGTT...TATGTCAGGGGGCTTACCACTACCTGCAACTCCAAGTCTAGGAAATCTAATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR TCA 90 bp | TTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACTCATAGAAATGCAGCTACAGGATCCTaGGTAGTTTCAGTGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLHWSLLSRPGWLWTHRNAATGS*VVSVLR Trigger: TCTCAACACTGAAACTACTCAGGATCCTGTAGCTGC...ATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR TCA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGTGGCATACTGTGGAATaGGATTTGAAGACAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKWHTVE*DLKTAV Trigger: CACAGCTGTCTTCAAATCTCATTCCACAGTATGCCA...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CCA 90 bp | CCCTTAGAACTGATGATTTCAAGCTATCATGTGGATGCTGGGAATCGAACCCAGTCAGCCCTTTGTGCTTaGACTTGTTCCTGCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PLELMISSYHVDAGNRTQSALCA*TCSCWH Trigger: ATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGA...CTGGGTTCGATTCCCAGCATCCACATGATAGCTTGAAATCATCAGTTCTAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CCA 90 bp | CCCTTAGAACTGATGATTTCAAGCTATCATGTGGATGCTGGGAATCGAACCCAGATTTCCTGGGAAGGGTaGGTAGCTTATGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLELMISSYHVDAGNRTQISWEG*VAYDSC Trigger: GCAGCTGTCATAAGCTACCCACCCTTCCCAGGAAAT...CTGGGTTCGATTCCCAGCATCCACATGATAGCTTGAAATCATCAGTTCTAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CCA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGACCAAGTCAATCACTTaGATGCCTTCAAAGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKTKSIT*MPSKSG Trigger: CCCTGACTTTGAAGGCATCCAAGTGATTGACTTGGT...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR GCA 90 bp | AGCATTAGATTTCCTAGACTTGGAGTTGCAGGTAGTGGTAAGCCCCCTGACATAACGTCTGACTCTCCTTaGCATAATCTCTCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SIRFPRLGVAGSGKPPDITSDSP*HNLSAS Trigger: GGAAGCAGAGAGATTATGGCAAGGAGAGTCAGACGT...TATGTCAGGGGGCTTACCACTACCTGCAACTCCAAGTCTAGGAAATCTAATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CCA 90 bp | ACTTATGGAATTGTGAACACTCACCCAGGAAAGAGAATGCGTGCACATGCACAGATTGCTCTCATTTCCTaGGAAGGGTGGGTAGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TYGIVNTHPGKRMRAHAQIALIS*EGWVAY Trigger: ATAAGCTACCCACCCTTCCCAGGAAATGAGAGCAAT...CTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | AGCATTAGATTTCCTAGACTTGGAGTTGCAGGTAGTGGTAAGCCCCCTGACATATTGATAAACTGGTGGTaGGCTTGGGGGTGTGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SIRFPRLGVAGSGKPPDILINWW*AWGCVI Trigger: AATTACACACCCCCAAGCCCACCACCAGTTTATCAA...TATGTCAGGGGGCTTACCACTACCTGCAACTCCAAGTCTAGGAAATCTAATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAATTGAGAGGAGTGGAATaGAACTGCAGAGGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGQPELYSLTLSRRKRKLRGVE*NCRGGG Trigger: CCCTCCTCCTCTGCAGTTTCATTCCACTCCTCTCAA...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGTTCAAAATAATAAGCTaGTTCCATCACATTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKFKIIS*FHHIGQ Trigger: CTGCCCAATGTGATGGAATCAGCTTATTATTTTGAA...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | CAATACTTGCCATGTTGGAAATTAACTTTGAACATTCACACCTTCAATCCTAGCCCTAGAGGACTGACATaGGTCCCTGCTGAAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QYLPCWKLTLNIHTFNPSPRGLT*VPAEMR Trigger: CCGCATTTCAGCAGGGACCCATGTCAGTCCTCTAGG...GCTAGGATTGAAGGTGTGAATGTTCAAAGTTAATTTCCAACATGGCAAGTATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | AACGGTGATGTGGTGAGCTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTTTCTTGATAAACTGGTaGTGGGCTTGGGGGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NGDVVSFWKIHWLLSVNTFLINW*WAWGCV Trigger: TACACACCCCCAAGCCCACCACCAGTTTATCAAGAA...AGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAGCTCACCACATCACCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGAGGGTGGGTAGCTTATaGCAGCTGCATCTAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVRVGSL*QLHLVA Trigger: GGCGACTAGATGCAGCTGTCATAAGCTACCCACCCT...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | AGCATTAGATTTCCTAGACTTGGAGTTGCAGGTAGTGGTAAGCCCCCTGACATACAAGAGGGTATATTCTaGATCCCCAAATCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIRFPRLGVAGSGKPPDIQEGIF*IPKSSD Trigger: ATCTGAAGATTTGGGGATTCAGAATATACCCTCTTG...TATGTCAGGGGGCTTACCACTACCTGCAACTCCAAGTCTAGGAAATCTAATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | CAATACTTGCCATGTTGGAAATTAACTTTGAACATTCACACCTTCAATCCTAGCGCTCTTGTGTCATCCTaGAAGCCTGTTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QYLPCWKLTLNIHTFNPSALVSS*KPVPPP Trigger: TGGAGGAGGAACAGGCTTTCAGGATGACACAAGAGC...GCTAGGATTGAAGGTGTGAATGTTCAAAGTTAATTTCCAACATGGCAAGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | ACTTATGGAATTGTGAACACTCACCCAGGAAAGAGAATGCGTGCACATGCACAGTGCCTTTTGTGTCTCTaGTATTTCATATGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TYGIVNTHPGKRMRAHAQCLLCL*YFICWK Trigger: CTTCCAGCATATGAAATAGCAGAGACACAAAAGGCA...CTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAAAGAGAATGCGTGCACATGCACAGTATTTATACACAGTTTCATTGGCTCCCTGGAGAAAAAGTaGCTTTTGTGTCTCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PRKENACTCTVFIHSFIGSLEKK*LLCLCY Trigger: ATAGCAGAGACACAAAAGGCACTTTTTCTCCAGGGA...GCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | ACTTATGGAATTGTGAACACTCACCCAGGAAAGAGAATGCGTGCACATGCACAGAGTCAATCACTTGGATaGCTTCAAAGTCAGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TYGIVNTHPGKRMRAHAQSQSLG*LQSQGF Trigger: AAAACCCTGACTTTGAAGGCATCCAAGTGATTGACT...CTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTGTTCACAATTCCATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | TGCATTCTATATCCCTTGACACTCAAAAACTGGAATTTTCCTAGAAGCATTGTGACCTCAAGCATACTCTaGGCTGCTTCACTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CILYPLTLKNWNFPRSIVTSSIL*AASLAP Trigger: TGGAGCCAGTGAAGCAGCCCAGAGTATGCTTGAGGT...CACAATGCTTCTAGGAAAATTCCAGTTTTTGAGTGTCAAGGGATATAGAATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | AACGGTGATGTGGTGAGCTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTCGTGATGAACCCAATTaGATAGAGACTCCACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGDVVSFWKIHWLLSVNTRDEPN*IETPPS Trigger: ACTTGGTGGAGTCTCTATCCAATTGGGTTCATCACG...AGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAGCTCACCACATCACCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | CAATACTTGCCATGTTGGAAATTAACTTTGAACATTCACACCTTCAATCCTAGCGGGTCCCTGCTGAAATaGGGGCAATTTGTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QYLPCWKLTLNIHTFNPSGSLLK*GQFVLL Trigger: TAAGAGCACAAATTGCCCGCATTTCAGCAGGGACCC...GCTAGGATTGAAGGTGTGAATGTTCAAAGTTAATTTCCAACATGGCAAGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGAAAGAGAATGCGTGCACATGCACAGTATTTATACACAGTTTCATTGGCCAAATCTTCAGATATTaGTGTCAAAAGAGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRKENACTCTVFIHSFIGQIFRY*CQKRRS Trigger: GGACCTCCTCTTTTGACACCAATATCTGAAGATTTG...GCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGCTCCAGGCCAAAGATTaGAGCGAAGGACAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVLQAKD*SEGQQW Trigger: CCATTGCTGTCCTTCGCTCCAATCTTTGGCCTGGAG...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| 3UTR CAA 72 bp | TGGCAGTTCTATATACAGTTTCCAATATCATTCGTGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WQFYIQFPISFV*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAACACGAATGATATTGGAAACTGTATATAGAACTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGAGAATCCTAGAGGACTaGCATGGGTCCCTGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVRILED*HGSLLK Trigger: TTTCAGCAGGGACCCATGTCAGTCCTCTAGGATTCT...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGCAGCAGGTAGGCTTTTaGATTCTGAATGGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVQQVGF*ILNGHL Trigger: GAGGTGGCCATTCAGAATGCAAAAGCCTACCTGCTG...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGTTAAGCCAGACTTGCTaGTGGTACTCAGCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVLSQTC*WYSAGR Trigger: CCTACCTGCTGAGTACCAGCAGCAAGTCTGGCTTAA...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGGGGCAGAGAACTTTCTaGCATTTCCTCCTCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVGQRTF*HFLLQF Trigger: GAACTGGAGGAGGAAATGGCAGAAAGTTCTCTGCCC...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGCCAGACCCAAGATCTTaGCCCAGAAGCGACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVPDPRS*PRSDIF Trigger: AAAGATGTCGCTTCTGGGGCAAGATCTTGGGTCTGG...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGTTCCTCCTCCAGTTCTaGATCAGCACCTTCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVFLLQF*ISTFQM Trigger: CATTTGGAAGGTGCTGATTCAGAACTGGAGGAGGAA...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTTTTGGAAGATTTACTTGTGTTAGCAAACATGCACATGTGCTGTGCCTGTTGTGTATCAGTAAGTTaGTTGAGGGCGAGGAATACT | + |
|
Preference number: 4 (lower is better) Translates to: IFLEDLLVLANMHMCCACCVSVS*LRARNT Trigger: AGTATTCCTCGCCCTCAAGCAACTTACTGATACACA...ACAGGCACAGCACATGTGCATGTTTGCTAACACAAGTAAATCTTCCAAAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAAGCGACATCTTTGGATTaGGTGTGTATCAGTAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPGQPELYSLTLSRRKRKATSLD*VCISKL Trigger: CAACTTACTGATACACACCCAATCCAAAGATGTCGC...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR TCA 90 bp | TGCATTCTATATCCCTTGACACTCAAAAACTGGAATTTTCCTAGAAGCATTGTGTGTGTAGTGAGAAGTTaGTTGCTTTGCAGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CILYPLTLKNWNFPRSIVCVVRS*LLCSRR Trigger: TCTTCTGCTGCAAAGCAATCAACTTCTCACTACACA...CACAATGCTTCTAGGAAAATTCCAGTTTTTGAGTGTCAAGGGATATAGAATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | AACGGTGATGTGGTGAGCTTCTGGAAAATCCACTGGCTACTTTCTGTAAATACTTTTCTTGATTTTTCTTaGAGTGACAATTTGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGDVVSFWKIHWLLSVNTFLDFS*SDNLCR Trigger: CCTGCACAAATTGTCACTGCAAGAAAAATCAAGAAA...AGTATTTACAGAAAGTAGCCAGTGGATTTTCCAGAAGCTCACCACATCACCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAAATTGGAAAAAGCATATaGTCCAGGCCAAAGATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPGQPELYSLTLSRRKRKIGKSI*SRPKIG Trigger: TCCAATCTTTGGCCTGGAGCATATGCTTTTTCCAAT...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGATATTCTTGATAAACTaGTGGTGGGCTTGGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATFCKYWQFYIQFPISFVIFLIN*WWAWGC Trigger: ACACCCCCAAGCCCACCACCAGTTTATCAAGAATAT...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTTGGAAGATTTACTTGTGTTAGCAAACATGCACATGTGCTGTGCCTGTAATAGACATACTTGTTaGCACCCGTTCTACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFLEDLLVLANMHMCCACNRHTC*HPFYFL Trigger: AAGAAAGTAGAACGGGTGCCAACAAGTATGTCTATT...ACAGGCACAGCACATGTGCATGTTTGCTAACACAAGTAAATCTTCCAAAAAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | GGTCCAGCGGTGAGGTCTCCCGTAGACAGGCTGACTCTAGACTGGTaGCTCCAAGAGGGGCTCATTCTGGGTGCGGGTTCGGTGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GPAVRSPVDRLTLDW*LQEGLILGAGSVSV Trigger: GACAGACACCGAACCCGCACCCAGAATGAGCCCCTCTTGGAGCCACCAGTCTAGAGTCAGCCTGTCTACGGGAGACCTCACCGCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | TCTGGTCCAGCGGTGAGGTCTCCCGTAGACAGGCTGACTCTAGACTaGTGGCTCCAAGAGGGGCTCATTCTGGGTGCGGGTTCGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGPAVRSPVDRLTLD*WLQEGLILGAGSVS Trigger: AGACACCGAACCCGCACCCAGAATGAGCCCCTCTTGGAGCCACCAGTCTAGAGTCAGCCTGTCTACGGGAGACCTCACCGCTGGACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | TTGCATTCTGAATGGCCACCTCAAGCATACTCTGGGCTGCTTCACTaGCTCCAACCTCAGGCTGGTCTGGGTCACAGTTACTGTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHSEWPPQAYSGLLH*LQPQAGLGHSYCLS Trigger: GCTCAGACAGTAACTGTGACCCAGACCAGCCTGAGGTTGGAGCCAGTGAAGCAGCCCAGAGTATGCTTGAGGTGGCCATTCAGAATGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGTTCGGTGTCTGTCCTTaGCTCCTCTTCCCGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKFGVCP*LLFPVL Trigger: GAGTACCGGGAAGAGGAGCAAAGGACAGACACCGAA...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS GCA 90 bp | CTGTCTGAGCCTTCCTCTTGTAAAAGGTCAAATCTCAGCCCTTTGTaGTTGGACTTGTTCCTGCTGGCATCCCTTAGCCCACAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSEPSSCKRSNLSPL*LDLFLLASLSPQRS Trigger: TGACCTCTGTGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACCTTTTACAAGAGGAAGGCTCAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | AGCTATCATGTGGATGCTGGGAATCGAACCCAGGTCCTCAGCAAGAGTAACAAGTCCAGACCCAAGATCTaGCCCCAGAAGCGACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SYHVDAGNRTQVLSKSNKSRPKI*PQKRHL Trigger: AAGATGTCGCTTCTGGGGCAAGATCTTGGGTCTGGA...CTTGTTACTCTTGCTGAGGACCTGGGTTCGATTCCCAGCATCCACATGATAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACTCATAGAAATGCCTCACTTCCTCCATaGTCCCTCTCCTCAGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: LLHWSLLSRPGWLWTHRNASLPP*SLSSAI Trigger: GATAGCTGAGGAGAGGGACAATGGAGGAAGTGAGGC...ATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACTCATAGAAATGCTCCAGGCCAAAGATaGGAGCGAAGGACAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLHWSLLSRPGWLWTHRNAPGQR*ERRTAM Trigger: CATTGCTGTCCTTCGCTCCAATCTTTGGCCTGGAGC...ATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS TCA 90 bp | CTTCCTCTCCTTCCTCTTCACCAAACTGATAGAATCCTAGAGGACTaGCATGGGTCCCTGCTGAAATGCGGGCAATTTGTGCTCTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLLPLHQTDRILED*HGSLLKCGQFVLLS Trigger: ACTTAAGAGCACAAATTGCCCGCATTTCAGCAGGGACCCATGTCAGTCCTCTAGGATTCTATCAGTTTGGTGAAGAGGAAGGAGAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS TCA 90 bp | CTCATCGTCCTCATCTTCATCTTCAGTTCCTTCGTTCTCCTCAGTTaGAAGTGCAACTGGCTCTTGTGTCATCCTGAAAGCCTGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LIVLIFIFSSFVLLS*KCNWLLCHPESLFL Trigger: GAGGAACAGGCTTTCAGGATGACACAAGAGCCAGTTGCACTTTCAACTGAGGAGAACGAAGGAACTGAAGATGAAGATGAGGACGATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTTCACTGGAGCTTGCTATCCAGACCAGGCTGGCTTTGGACTCATAGAAATTCAAATCTCAGCCCTTaGTGCTTGGACTTGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLHWSLLSRPGWLWTHRNSNLSP*CLDLFL Trigger: CAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGA...ATTTCTATGAGTCCAAAGCCAGCCTGGTCTGGATAGCAAGCTCCAGTGAAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS GCA 90 bp | GATGAACCCAATTGGATAGAGACTCCACCAAGTCAATCACTTGGATaGCTTCAAAGTCAGGGTTTTCCTCATAGCTGTCTCGACCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: DEPNWIETPPSQSLG*LQSQGFPHSCLDHL Trigger: AAGGTGGTCGAGACAGCTATGAGGAAAACCCTGACTTTGAAGGCATCCAAGTGATTGACTTGGTGGAGTCTCTATCCAATTGGGTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | AATTTCTGGTCCACTGGGATATTCTTGATAAACTGGTGGTGGGCTTaGGGGTGTGTAATTCTCCACACAGTACTTATGACCCCAGCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: NFWSTGIFLINWWWA*GCVILHTVLMTPAY Trigger: ATAGGCTGGGGTCATAAGTACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGAACTGATGATTTCAAGCTATCATGTGGATGCTGGGAATCGAACCCAGCTTCGTTCTCCTCAGTaGAAAGTGCAACTGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLELMISSYHVDAGNRTQLRSPQ*KVQLAL Trigger: AAGAGCCAGTTGCACTTTCAACTGAGGAGAACGAAG...CTGGGTTCGATTCCCAGCATCCACATGATAGCTTGAAATCATCAGTTCTAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS TCA 90 bp | CAGGCCAAAGATTGGAGCGAAGGACAGCAATGGCATACTGTGGAATaGGATTTGAAGACAGCTGTGTTGTCCAAGAGGGTATATTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QAKDWSEGQQWHTVE*DLKTAVLSKRVYSE Trigger: TTCAGAATATACCCTCTTGGACAACACAGCTGTCTTCAAATCTCATTCCACAGTATGCCATTGCTGTCCTTCGCTCCAATCTTTGGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CCA 90 bp | TACAGCGACCCTGAGGAAGAATATACTGCACGTGATGAACCCAATTaGATAGAGACTCCACCAAGTCAATCACTTGGATGCCTTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YSDPEEEYTARDEPN*IETPPSQSLGCLQS Trigger: ACTTTGAAGGCATCCAAGTGATTGACTTGGTGGAGTCTCTATCCAATTGGGTTCATCACGTGCAGTATATTCTTCCTCAGGGTCGCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | TTCTGTAATTTCTGGTCCACTGGGATATTCTTGATAAACTGGTGGTaGGCTTGGGGGTGTGTAATTCTCCACACAGTACTTATGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FCNFWSTGIFLINWW*AWGCVILHTVLMTP Trigger: TGGGGTCATAAGTACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAAATTACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS TCA 90 bp | CTCATCTGTCCCCAAACCAACTCCAGCTTGTTCAAAATAATAAGCTaGTTCCATCACATTGGGCAGAGAACTTTCTGCCATTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LICPQTNSSLFKIIS*FHHIGQRTFCHFLL Trigger: GAGGAGGAAATGGCAGAAAGTTCTCTGCCCAATGTGATGGAATCAGCTTATTATTTTGAACAAGCTGGAGTTGGTTTGGGGACAGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS TCA 90 bp | AAGATTGGAGCGAAGGACAGCAATGGCATACTGTGGAATGAGATTTaGAGACAGCTGTGTTGTCCAAGAGGGTATATTCTGAATCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KIGAKDSNGILWNEI*RQLCCPRGYILNPQ Trigger: TTGGGGATTCAGAATATACCCTCTTGGACAACACAGCTGTCTTCAAATCTCATTCCACAGTATGCCATTGCTGTCCTTCGCTCCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | TCTGCAGGACGCTCATCTAGTATCTTGGTCAACACTTTAGAAAGATaGTCATATAGATTTAAGCCAGACTTGCTGCTGGTACTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGRSSSILVNTLER*SYRFKPDLLLVLSR Trigger: CCTGCTGAGTACCAGCAGCAAGTCTGGCTTAAATCTATATGACCATCTTTCTAAAGTGTTGACCAAGATACTAGATGAGCGTCCTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | CATTTCTGTAATTTCTGGTCCACTGGGATATTCTTGATAAACTGGTaGTGGGCTTGGGGGTGTGTAATTCTCCACACAGTACTTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: HFCNFWSTGIFLINW*WAWGCVILHTVLMT Trigger: GGTCATAAGTACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAAATTACAGAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CAA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAAGCTGATTCCATCACATaGGGCAGAGAACTTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPGQPELYSLTLSRRKRKADSIT*GRELSA Trigger: GGCAGAAAGTTCTCTGCCCAATGTGATGGAATCAGC...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGAAAGAGAATGCGTGCACATGCACAGTATTTATACACAGTTTCATTGGCTCTTTTTGTATAGGGTaGAACCAATTACAGCGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PRKENACTCTVFIHSFIGSFCIG*NQLQRP Trigger: GGGTCGCTGTAATTGGTTCAACCCTATACAAAAAGA...GCCAATGAAACTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTCTATATCCCTTGACACTCAAAAACTGGAATTTTCCTAGAAGCATTGTGAAACTGGTGGTGGGCTaGGGGGTGTGTAATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CILYPLTLKNWNFPRSIVKLVVG*GVCNSP Trigger: TGGAGAATTACACACCCCCAAGCCCACCACCAGTTT...CACAATGCTTCTAGGAAAATTCCAGTTTTTGAGTGTCAAGGGATATAGAATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 90 bp | ATTCATTTCTGTAATTTCTGGTCCACTGGGATATTCTTGATAAACTaGTGGTGGGCTTGGGGGTGTGTAATTCTCCACACAGTACTTATG | + |
|
Preference number: 5 (lower is better) Translates to: IHFCNFWSTGIFLIN*WWAWGCVILHTVLM Trigger: CATAAGTACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAAATTACAGAAATGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | CAATACTTGCCATGTTGGAAATTAACTTTGAACATTCACACCTTCAATCCTAGCGTATCAGTAAGTTGCTaGAGGGCGAGGAATACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QYLPCWKLTLNIHTFNPSVSVSC*RARNTR Trigger: CCGAGTATTCCTCGCCCTCAAGCAACTTACTGATAC...GCTAGGATTGAAGGTGTGAATGTTCAAAGTTAATTTCCAACATGGCAAGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAAGTGTGTATCAGTAAGTaGCTTGAGGGCGAGGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: VPGQPELYSLTLSRRKRKVCISK*LEGEEY Trigger: GTATTCCTCGCCCTCAAGCAACTTACTGATACACAC...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAACACCAAGTCAATCACTaGGATGCCTTCAAAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPGQPELYSLTLSRRKRKHQVNH*DAFKVR Trigger: CCTGACTTTGAAGGCATCCAAGTGATTGACTTGGTG...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGGACAGCCAGAATTATATAGTTTGACCCTGTCAAGGAGAAAAAGAAAATCCACTGGGATATTCTaGATAAACTGGTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPGQPELYSLTLSRRKRKSTGIF*INWWWA Trigger: AGCCCACCACCAGTTTATCAAGAATATCCCAGTGGA...TTTTCTTTTTCTCCTTGACAGGGTCAAACTATATAATTCTGGCTGTCCTGGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS-3UTR CAA 90 bp | ATCTTTTTGGAAGATTTACTTGTGTTAGCAAACATGCACATGTGCTGTGCCTGTGAGAAGTTGATTGCTTaGCAGCAGAAGATGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IFLEDLLVLANMHMCCACEKLIA*QQKMIP Trigger: GGGAATCATCTTCTGCTGCAAAGCAATCAACTTCTC...ACAGGCACAGCACATGTGCATGTTTGCTAACACAAGTAAATCTTCCAAAAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | CAATACTTGCCATGTTGGAAATTAACTTTGAACATTCACACCTTCAATCCTAGCTTTCCTCGGCGTGGCTaGTGTAGTGAGAAGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: QYLPCWKLTLNIHTFNPSFPRRG*CSEKLI Trigger: AATCAACTTCTCACTACACAAGCCACGCCGAGGAAA...GCTAGGATTGAAGGTGTGAATGTTCAAAGTTAATTTCCAACATGGCAAGTATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | GCTACTTTCTGTAAATACTGGCAGTTCTATATACAGTTTCCAATATCATTCGTGAGATTTAAGCCAGACTaGCTGCTGGTACTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATFCKYWQFYIQFPISFVRFKPD*LLVLSR Trigger: CCTGCTGAGTACCAGCAGCAAGTCTGGCTTAAATCT...CACGAATGATATTGGAAACTGTATATAGAACTGCCAGTATTTACAGAAAGTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTTTTGGAAGATTTACTTGTGTTAGCAAACATGCACATGTGCTGTGCCTGTCCAAATCTTCAGATATaGGTGTCAAAAGAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFLEDLLVLANMHMCCACPNLQI*VSKEEV Trigger: GACCTCCTCTTTTGACACCAATATCTGAAGATTTGG...ACAGGCACAGCACATGTGCATGTTTGCTAACACAAGTAAATCTTCCAAAAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTCTATATCCCTTGACACTCAAAAACTGGAATTTTCCTAGAAGCATTGTGTTGAAGACAGCTGTGTaGTCCAAGAGGGTATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: CILYPLTLKNWNFPRSIVLKTAV*SKRVYS Trigger: AGAATATACCCTCTTGGACAACACAGCTGTCTTCAA...CACAATGCTTCTAGGAAAATTCCAGTTTTTGAGTGTCAAGGGATATAGAATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 72 bp | GCGGTGAGGTCTCCCGTAGACAGGCTGACTCTAGACTaGTGGCTCCAAGAGGGGCTCATTCTGGGTGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AVRSPVDRLTLD*WLQEGLILGAG Trigger: ACCCGCACCCAGAATGAGCCCCTCTTGGAGCCACCAGTCTAGAGTCAGCCTGTCTACGGGAGACCTCACCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 72 bp | GTGAGGTCTCCCGTAGACAGGCTGACTCTAGACTGGTaGCTCCAAGAGGGGCTCATTCTGGGTGCGGGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: VRSPVDRLTLDW*LQEGLILGAGS Trigger: CGAACCCGCACCCAGAATGAGCCCCTCTTGGAGCCACCAGTCTAGAGTCAGCCTGTCTACGGGAGACCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS GCA 72 bp | TCTAGACTGGTGGCTCCAAGAGGGGCTCATTCTGGGTaGGGGTTCGGTGTCTGTCCTTTGCTCCTCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRLVAPRGAHSG*GFGVCPLLLFP Trigger: CGGGAAGAGGAGCAAAGGACAGACACCGAACCCGCACCCAGAATGAGCCCCTCTTGGAGCCACCAGTCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS TCA 72 bp | GCATCCCTTAGCCCACAGAGGTCAGGTTGGGGTGTCTaGGACTGCGGGAAAGTACTTTCCTCGGCGTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASLSPQRSGWGV*DCGKVLSSAWL Trigger: AAGCCACGCCGAGGAAAGTACTTTCCCGCAGTCTCAGACACCCCAACCTGACCTCTGTGGGCTAAGGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS GCA 72 bp | GGTCAAATCTCAGCCCTTTGTGCTTGGACTTGTTCCTaGTGGCATCCCTTAGCCCACAGAGGTCAGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GQISALCAWTCS*WHPLAHRGQVG Trigger: CCCAACCTGACCTCTGTGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CAA 90 bp | CCTTCCTCTTGTAAAAGGTCAAATCTCAGCCCTTTGTGCTTGGACTaGTTCCTGCTGGCATCCCTTAGCCCACAGAGGTCAGGTTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSSCKRSNLSPLCLD*FLLASLSPQRSGWG Trigger: ACCCCAACCTGACCTCTGTGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACCTTTTACAAGAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CAA 90 bp | TCTGAGCCTTCCTCTTGTAAAAGGTCAAATCTCAGCCCTTTGTGCTaGGACTTGTTCCTGCTGGCATCCCTTAGCCCACAGAGGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SEPSSCKRSNLSPLC*DLFLLASLSPQRSG Trigger: ACCTGACCTCTGTGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACCTTTTACAAGAGGAAGGCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CAA 90 bp | TTACTGTCTGAGCCTTCCTCTTGTAAAAGGTCAAATCTCAGCCCTTaGTGCTTGGACTTGTTCCTGCTGGCATCCCTTAGCCCACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSEPSSCKRSNLSP*CLDLFLLASLSPQR Trigger: CCTCTGTGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACCTTTTACAAGAGGAAGGCTCAGACAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CAA 90 bp | CTTGCCCCAGAAGCGACATCTTTGGATTGGGTGTGTATCAGTAAGTaGCTTGAGGGCGAGGAATACTCGGTAAGTCTCATCTGTCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LAPEATSLDWVCISK*LEGEEYSVSLICPQ Trigger: TTGGGGACAGATGAGACTTACCGAGTATTCCTCGCCCTCAAGCAACTTACTGATACACACCCAATCCAAAGATGTCGCTTCTGGGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS GCA 72 bp | CCTTCCTCTTGTAAAAGGTCAAATCTCAGCCCTTTGTaGTTGGACTTGTTCCTGCTGGCATCCCTTAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSSCKRSNLSPL*LDLFLLASLSP Trigger: TGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACCTTTTACAAGAGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 72 bp | TGTAAAAGGTCAAATCTCAGCCCTTTGTGCTTGGACTaGTTCCTGCTGGCATCCCTTAGCCCACAGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CKRSNLSPLCLD*FLLASLSPQRS Trigger: TGACCTCTGTGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACCTTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 72 bp | TCCTCTTGTAAAAGGTCAAATCTCAGCCCTTTGTGCTaGGACTTGTTCCTGCTGGCATCCCTTAGCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSCKRSNLSPLC*DLFLLASLSPQ Trigger: CTGTGGGCTAAGGGATGCCAGCAGGAACAAGTCCAAGCACAAAGGGCTGAGATTTGACCTTTTACAAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS TCA 72 bp | CTTCCTCTTCACCAAACTGATAGAATCCTAGAGGACTaGCATGGGTCCCTGCTGAAATGCGGGCAATTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPLHQTDRILED*HGSLLKCGQFV Trigger: CACAAATTGCCCGCATTTCAGCAGGGACCCATGTCAGTCCTCTAGGATTCTATCAGTTTGGTGAAGAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CAA 90 bp | AAGTACTTTCCTCGGCGTGGCTTGTGTAGTGAGAAGTTGATTGCTTaGCAGCAGAAGATGATTCCCAAGGATCAGAATAAGGTGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: KYFPRRGLCSEKLIA*QQKMIPKDQNKVSR Trigger: CCGGGACACCTTATTCTGATCCTTGGGAATCATCTTCTGCTGCAAAGCAATCAACTTCTCACTACACAAGCCACGCCGAGGAAAGTACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CCA 72 bp | TCCACTGGGATATTCTTGATAAACTGGTGGTGGGCTTaGGGGTGTGTAATTCTCCACACAGTACTTATGACC | + |
|
Preference number: 6 (lower is better) Translates to: STGIFLINWWWA*GCVILHTVLMT Trigger: GGTCATAAGTACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 72 bp | TTCTGGTCCACTGGGATATTCTTGATAAACTGGTGGTaGGCTTGGGGGTGTGTAATTCTCCACACAGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: FWSTGIFLINWW*AWGCVILHTVL Trigger: AAGTACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CAA 72 bp | CCTCGGCGTGGCTTGTGTAGTGAGAAGTTGATTGCTTaGCAGCAGAAGATGATTCCCAAGGATCAGAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRRGLCSEKLIA*QQKMIPKDQNK Trigger: CTTATTCTGATCCTTGGGAATCATCTTCTGCTGCAAAGCAATCAACTTCTCACTACACAAGCCACGCCGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 72 bp | TTGCCATTGGAAAAAGCATATGCTCCAGGCCAAAGATaGGAGCGAAGGACAGCAATGGCATACTGTGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LPLEKAYAPGQR*ERRTAMAYCGM Trigger: CATTCCACAGTATGCCATTGCTGTCCTTCGCTCCAATCTTTGGCCTGGAGCATATGCTTTTTCCAATGGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 72 bp | GTCCACTGGGATATTCTTGATAAACTGGTGGTGGGCTaGGGGGTGTGTAATTCTCCACACAGTACTTATGAC | + |
|
Preference number: 6 (lower is better) Translates to: VHWDILDKLVVG*GVCNSPHSTYD Trigger: GTCATAAGTACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS TCA 72 bp | GCGAAGGACAGCAATGGCATACTGTGGAATGAGATTTaGAGACAGCTGTGTTGTCCAAGAGGGTATATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AKDSNGILWNEI*RQLCCPRGYIL Trigger: CAGAATATACCCTCTTGGACAACACAGCTGTCTTCAAATCTCATTCCACAGTATGCCATTGCTGTCCTTCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 72 bp | AATTTCTGGTCCACTGGGATATTCTTGATAAACTGGTaGTGGGCTTGGGGGTGTGTAATTCTCCACACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: NFWSTGIFLINW*WAWGCVILHTV Trigger: TACTGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 90 bp | ACTGGGATCATTCATTTCTGTAATTTCTGGTCCACTGGGATATTCTaGATAAACTGGTGGTGGGCTTGGGGGTGTGTAATTCTCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: TGIIHFCNFWSTGIF*INWWWAWGCVILHT Trigger: TGTGTGGAGAATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAAATTACAGAAATGAATGATCCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS GCA 72 bp | AATTGGATAGAGACTCCACCAAGTCAATCACTTGGATaGCTTCAAAGTCAGGGTTTTCCTCATAGCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: NWIETPPSQSLG*LQSQGFPHSCL Trigger: GAGACAGCTATGAGGAAAACCCTGACTTTGAAGGCATCCAAGTGATTGACTTGGTGGAGTCTCTATCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS TCA 72 bp | CCCCAAACCAACTCCAGCTTGTTCAAAATAATAAGCTaGTTCCATCACATTGGGCAGAGAACTTTCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PQTNSSLFKIIS*FHHIGQRTFCH Trigger: ATGGCAGAAAGTTCTCTGCCCAATGTGATGGAATCAGCTTATTATTTTGAACAAGCTGGAGTTGGTTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 72 bp | ATCTTCTTCCTCTTCCTCTTCTTCATCTTCATCTTTTaGTATAGGGTTGAACCAATTACAGCGACCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IFFLFLFFIFIF*YRVEPITATLR Trigger: CCTCAGGGTCGCTGTAATTGGTTCAACCCTATACAAAAAGATGAAGATGAAGAAGAGGAAGAGGAAGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 72 bp | ATTCATTTCTGTAATTTCTGGTCCACTGGGATATTCTaGATAAACTGGTGGTGGGCTTGGGGGTGTGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: IHFCNFWSTGIF*INWWWAWGCVI Trigger: AATTACACACCCCCAAGCCCACCACCAGTTTATCAAGAATATCCCAGTGGACCAGAAATTACAGAAATGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CCA 72 bp | CGCTCATCTAGTATCTTGGTCAACACTTTAGAAAGATaGTCATATAGATTTAAGCCAGACTTGCTGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSSSILVNTLER*SYRFKPDLLLV Trigger: TACCAGCAGCAAGTCTGGCTTAAATCTATATGACCATCTTTCTAAAGTGTTGACCAAGATACTAGATGAGCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS CAA 90 bp | TTTTCAATGATGTCAACAGCATCTGCAGGACGCTCATCTAGTATCTaGGTCAACACTTTAGAAAGATGGTCATATAGATTTAAGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSMMSTASAGRSSSI*VNTLERWSYRFKPD Trigger: GTCTGGCTTAAATCTATATGACCATCTTTCTAAAGTGTTGACCAAGATACTAGATGAGCGTCCTGCAGATGCTGTTGACATCATTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
||
| CDS GCA 72 bp | CAAATGTCCCTGGAGAAAAAGTGCCTTTTGTGTCTCTaGTATTTCATATGCTGGAAGCATCTCATATTCATT | + |
|
Preference number: 6 (lower is better) Translates to: QMSLEKKCLLCL*YFICWKHLIFI Trigger: AATGAATATGAGATGCTTCCAGCATATGAAATAGCAGAGACACAAAAGGCACTTTTTCTCCAGGGACATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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| CDS CAA 90 bp | CTTTTCTTCATCTTCTTCCTCTTCCTCTTCTTCATCTTCATCTTTTaGTATAGGGTTGAACCAATTACAGCGACCCTGAGGAAGAATATA | + |
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Preference number: 6 (lower is better) Translates to: LFFIFFLFLFFIFIF*YRVEPITATLRKNI Trigger: TATATTCTTCCTCAGGGTCGCTGTAATTGGTTCAACCCTATACAAAAAGATGAAGATGAAGAAGAGGAAGAGGAAGAAGATGAAGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169670.8 |
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