Pregenerated sensors for RSPH10B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075569Ensembl transcript IDs: ENSMUST00000166847.8, ENSMUST00000169758.2, ENSMUST00000212711.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGCACTCAGCGACTTCTTaGGCTTGGGCTCTGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LWNICLSFLSTCPCSSTMHSATS*AWALTA Trigger: GGCAGTCAGAGCCCAAGCTCAAGAAGTCGCTGAGTG...CATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | TATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCTGGGCGTGAGAGGCTaGGAGGCTGGGATCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: YFMEHLSQLSVYLSLQLDLGVRG*EAGISD Trigger: ATCGGAGATCCCAGCCTCTCAGCCTCTCACGCCCAG...GTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR GCA 90 bp | TTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGCCTTCCCATGTCTCTTaGCATGACACCAGTGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LWNICLSFLSTCPCSSTMPSHVS*HDTSGR Trigger: TCGGCCACTGGTGTCATGGCAAGAGACATGGGAAGG...CATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR CCA 90 bp | TTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGGCACTCGGGCTCCTGTaGATGCTCTGGTTCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: LWNICLSFLSTCPCSSTMALGLL*MLWFSI Trigger: GATACTGAACCAGAGCATCCACAGGAGCCCGAGTGC...CATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CCA 90 bp | TTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGGCTGGGATCTCCGATaGCTCCTTGAGCACAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FMEHLSQLSVYLSLQLDHGWDLR*LLEHSD Trigger: ATCACTGTGCTCAAGGAGCCATCGGAGATCCCAGCC...ATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | TTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCAACACATGGCCATTCTTaGAGGTCATTCTGCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FYGTFVSAFCLLVLAARPTHGHS*RSFCPC Trigger: GCAGGGGCAGAATGACCTTCAAGAATGGCCATGTGT...TGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR TCA 90 bp | CTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCCACTCAGCGACTTCTTaGGCTTGGGCTCTGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LYFMEHLSQLSVYLSLQLHSATS*AWALTA Trigger: GGCAGTCAGAGCCCAAGCTCAAGAAGTCGCTGAGTG...GAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGTCTATCTGCCTCTGCTaGGCCAGCTCTGCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FILWNICLSFLSTCPCSSSICLC*ASSASW Trigger: CCAGGAAGCAGAGCTGGCTCAGCAGAGGCAGATAGA...CGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCCTGGGCGTGAGAGGCTaGGAGGCTGGGATCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: KHFILWNICLSFLSTCPCLGVRG*EAGISD Trigger: ATCGGAGATCCCAGCCTCTCAGCCTCTCACGCCCAG...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR GCA 90 bp | TTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATATTCTGCCCCTGCCCTaGTTTTTGTTGGAAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FMEHLSQLSVYLSLQLDHILPLP*FLLEAH Trigger: GTGGGCTTCCAACAAAAAGCAGGGCAGGGGCAGAAT...ATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR GCA 90 bp | TTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGAGCTTGGGCTCTGACTaGCTGATTTTACCATCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LWNICLSFLSTCPCSSTMSLGSD*LILPSG Trigger: GCCTGATGGTAAAATCAGGCAGTCAGAGCCCAAGCT...CATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | ATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCACTCCTCGTTTGTTGTaGGCCACCTCATTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ILWNICLSFLSTCPCSSTTPRLL*ATSFCL Trigger: AAGGCAGAATGAGGTGGCTCACAACAAACGAGGAGT...GGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR TCA 90 bp | TTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATCTTGAGCTTGGGCTCTaGCTGCCTGATTTTACCATC | + |
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Preference number: 4 (lower is better) Translates to: FMEHLSQLSVYLSLQLDHLELGL*LPDFTI Trigger: GATGGTAAAATCAGGCAGTCAGAGCCCAAGCTCAAG...ATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CCA 90 bp | CACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCGCACTCGGGCTCCTGTaGATGCTCTGGTTCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: HFILWNICLSFLSTCPCSALGLL*MLWFSI Trigger: GATACTGAACCAGAGCATCCACAGGAGCCCGAGTGC...GCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGGGCTGGGATCTCCGATaGCTCCTTGAGCACAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FILWNICLSFLSTCPCSSGWDLR*LLEHSD Trigger: ATCACTGTGCTCAAGGAGCCATCGGAGATCCCAGCC...CGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | TTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATACGGTCCAGGCTCTGTaGGTAATCCATTTCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FMEHLSQLSVYLSLQLDHTVQAL*VIHFSF Trigger: GAAACTGAAATGGATTACTCACAGAGCCTGGACCGT...ATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR TCA 90 bp | TTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGTCCGCTGTTGCTCACTaGATAAGTGACCTTTTACCT | + |
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Preference number: 4 (lower is better) Translates to: LWNICLSFLSTCPCSSTMSAVAH*ISDLLP Trigger: AGGTAAAAGGTCACTTATTCAGTGAGCAACAGCGGA...CATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | ATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCTCTGCTTCCTGGAGCTaGTTTTCCTTCACTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ILWNICLSFLSTCPCSSTSASWS*FSFTFS Trigger: GGAGAAAGTGAAGGAAAATCAGCTCCAGGAAGCAGA...GGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCTCTATCTGCCTCTGCTaGGCCAGCTCTGCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KHFILWNICLSFLSTCPCSICLC*ASSASW Trigger: CCAGGAAGCAGAGCTGGCTCAGCAGAGGCAGATAGA...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR GCA 90 bp | TTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGTGGTGATGGAACCTaGAGTCTTTCAGGAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: FYGTFVSAFCLLVLAARPCGDGT*SLSGIS Trigger: GGAGATTCCTGAAAGACTGCAGGTTCCATCACCACA...TGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CCA 90 bp | AACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCATGGTGTTTCCACGACTaGGACAACAGCACTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NTLFYGTFVSAFCLLVLAWCFHD*DNSTGG Trigger: GCCCCCAGTGCTGTTGTCCCAGTCGTGGAAACACCA...TGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR CCA 90 bp | TTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGCGAAGTCTTGTTTCCTaGCCTCCTCTTCCCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: FILWNICLSFLSTCPCSSRSLVS*PPLPVG Trigger: TCCTACGGGAAGAGGAGGCCAGGAAACAAGACTTCG...CGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | ACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGTCCTCCTTAGCTCTGTaGTGTTCCTCAGGACTGCGT | + |
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Preference number: 4 (lower is better) Translates to: TLYFMEHLSQLSVYLSLQSSLAL*CSSGLR Trigger: ACGCAGTCCTGAGGAACATCACAGAGCTAAGGAGGA...CTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR TCA 90 bp | ACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTACGACTTGGTGCTGCTaGAGTGGACTTCGGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TLFYGTFVSAFCLLVLAATTWCC*SGLRSH Trigger: ATGACTCCGAAGTCCACTTCAGCAGCACCAAGTCGT...AGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | ATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCACCAGGCCTCTTCCTTaGGTCTTGAAGTTCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: ILWNICLSFLSTCPCSSTTRPLP*VLKFIL Trigger: CAAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGT...GGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | ATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCCCTTCACTTTCTCCTTaGGCATCTCTTCACGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: ILWNICLSFLSTCPCSSTPSLSP*ASLHVC Trigger: ACAAACGTGAAGAGATGCTCAAGGAGAAAGTGAAGG...GGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | TTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCACCTTCACTTTCTCCTTaGGCATCTCTTCACGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: FYGTFVSAFCLLVLAARPPSLSP*ASLHVC Trigger: ACAAACGTGAAGAGATGCTCAAGGAGAAAGTGAAGG...TGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR GCA 90 bp | TTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGATCTCTTTTCGGGGCTTaGTTGAGTGGTGTTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: LFYGTFVSAFCLLVLAARSLFGA*LSGVST Trigger: CGTGGAAACACCACTCAAGCAAGCCCCGAAAAGAGA...TCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR GCA 90 bp | TTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGAACTGCGTATTCCACCTaGTTCTTTTCCTCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LFYGTFVSAFCLLVLAARTAYST*FFSSSW Trigger: CCAGGAGGAGGAAAAGAAGCAGGTGGAATACGCAGT...TCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR GCA 90 bp | TTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGTCATCTGGTCAAACATaGAGCAGAGAGAGAAGCATA | + |
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Preference number: 4 (lower is better) Translates to: LWNICLSFLSTCPCSSTMSSGQT*SRERSI Trigger: TATGCTTCTCTCTCTGCTGCATGTTTGACCAGATGA...CATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR GCA 90 bp | ACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCTGCTGAGCCAGCTCTaGTTCCTGGAGCTGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLFYGTFVSAFCLLVLAALLSQL*FLELIF Trigger: GAAAATCAGCTCCAGGAAGCAGAGCTGGCTCAGCAG...AGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGTGCCCTGCTTTTTGTTaGAAGCCCACTCTCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FILWNICLSFLSTCPCSSCPAFC*KPTLPH Trigger: ATGAGGGAGAGTGGGCTTCCAACAAAAAGCAGGGCA...CGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR CCA 90 bp | ACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCGAAGTCTTGTTTCCTaGCCTCCTCTTCCCGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: TLYFMEHLSQLSVYLSLQRSLVS*PPLPVG Trigger: TCCTACGGGAAGAGGAGGCCAGGAAACAAGACTTCG...CTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | CAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGATGGGCTCTTCGTACTaGGTCTCCTCTTCACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QTLYFMEHLSQLSVYLSLMGSSY*VSSSLC Trigger: GCAGAGTGAAGAGGAGACTCAGTACGAAGAGCCCAT...CAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR TCA 90 bp | CACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCGCTGTGTGCCACACTTaGACATACCAAATCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: HFILWNICLSFLSTCPCSAVCHT*TYQIHS Trigger: GGAATGGATTTGGTATGTTCAAGTGTGGCACACAGC...GCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR TCA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCACGACTTGGTGCTGCTaGAGTGGACTTCGGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: KHFILWNICLSFLSTCPCTTWCC*SGLRSH Trigger: ATGACTCCGAAGTCCACTTCAGCAGCACCAAGTCGT...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR GCA 90 bp | ACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTAGGTCATTCTGCCCCTaGCCTGCTTTTTGTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TLFYGTFVSAFCLLVLAARSFCP*PAFCWK Trigger: CTTCCAACAAAAAGCAGGGCAGGGGCAGAATGACCT...AGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR GCA 90 bp | TGCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTCTGCTGAGCCAGCTCTaGTTCCTGGAGCTGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: CKHFILWNICLSFLSTCPLLSQL*FLELIF Trigger: GAAAATCAGCTCCAGGAAGCAGAGCTGGCTCAGCAG...AGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CCA 90 bp | TATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATTCCTCATGCCATTaGTCACCTCTCCTTCATAAG | + |
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Preference number: 4 (lower is better) Translates to: YFMEHLSQLSVYLSLQLDHSSCH*SPLLHK Trigger: CTTATGAAGGAGAGGTGACCAATGGCATGAGGAATG...GTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR CCA 90 bp | TGCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTGTTCCAAAGCCATTCTaGATCCCCTTCTCCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: CKHFILWNICLSFLSTCPVPKPF*IPFSQW Trigger: CCACTGGGAGAAGGGGATCCAGAATGGCTTTGGAAC...AGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR CCA 90 bp | ACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTTTGGTGCTGCTGAAGTaGACTTCGGAGTCATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TLFYGTFVSAFCLLVLAALVLLK*TSESWL Trigger: AAGCCATGACTCCGAAGTCCACTTCAGCAGCACCAA...AGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | GCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTCATAGCTTTCCACTATaGGCTTGGTCAGGATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ANTLFYGTFVSAFCLLVLHSFPL*AWSGWA Trigger: AGCCCATCCTGACCAAGCTCATAGTGGAAAGCTATG...AAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR TCA 90 bp | CTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCTCCGCTGTTGCTCACTaGATAAGTGACCTTTTACCT | + |
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Preference number: 4 (lower is better) Translates to: LYFMEHLSQLSVYLSLQLSAVAH*ISDLLP Trigger: AGGTAAAAGGTCACTTATTCAGTGAGCAACAGCGGA...GAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR TCA 90 bp | TGCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTCTTGAGCTTGGGCTCTaGCTGCCTGATTTTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: CKHFILWNICLSFLSTCPLELGL*LPDFTI Trigger: GATGGTAAAATCAGGCAGTCAGAGCCCAAGCTCAAG...AGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGGTCTCCTCTTCACTCTaGTCCATTTGTACTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FILWNICLSFLSTCPCSSVSSSL*SICTES Trigger: AGACTCAGTACAAATGGAGCAGAGTGAAGAGGAGAC...CGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR GCA 90 bp | AACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAAGCTTGGGCTCTGACTaGCTGATTTTACCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLFYGTFVSAFCLLVLASLGSD*LILPSG Trigger: GCCTGATGGTAAAATCAGGCAGTCAGAGCCCAAGCT...TGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CCA 90 bp | GCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTTTCTTTTCCTCCTCCTaGCTTTCCTCGGGGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: ANTLFYGTFVSAFCLLVLFFSSS*LSSGYM Trigger: CATGTACCCCGAGGAAAGCCAGGAGGAGGAAAAGAA...AAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CCA 90 bp | AACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCATTGGTGCTGCTGAAGTaGACTTCGGAGTCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTLFYGTFVSAFCLLVLALVLLK*TSESWL Trigger: AAGCCATGACTCCGAAGTCCACTTCAGCAGCACCAA...TGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCATATTTCTCACCCTGTaGAGACATAAACACCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFMEHLSQLSVYLSLQLIFLTL*RHKHQA Trigger: GGCCTGGTGTTTATGTCTCCACAGGGTGAGAAATAT...GAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR TCA 90 bp | TATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCTCTTCCTTGAGTCTTaGAGTTCATTTTGGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: YFMEHLSQLSVYLSLQLDLFLES*SSFWRL Trigger: AAGTCTCCAAAATGAACTTCAAGACTCAAGGAAGAG...GTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR TCA 90 bp | ACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGACCAGGCCTCTTCCTTaGGTCTTGAAGTTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLYFMEHLSQLSVYLSLQTRPLP*VLKFIL Trigger: CAAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGT...CTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR TCA 90 bp | TTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATTGTTCACCCATATGTTaGGTTTCTCTTTCTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FMEHLSQLSVYLSLQLDHCSPIC*VSLSVH Trigger: ATGAACAGAAAGAGAAACTCAACATATGGGTGAACA...ATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR TCA 90 bp | AACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCATCTGCTTCCTGGAGCTaGTTTTCCTTCACTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTLFYGTFVSAFCLLVLASASWS*FSFTFS Trigger: GGAGAAAGTGAAGGAAAATCAGCTCCAGGAAGCAGA...TGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR GCA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCGATGTTCCTCAGGACTaGGTATTCCACCTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KHFILWNICLSFLSTCPCDVPQD*VFHLLL Trigger: AAGAAGCAGGTGGAATACGCAGTCCTGAGGAACATC...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR GCA 90 bp | AACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCATGTGGTGATGGAACCTaGAGTCTTTCAGGAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTLFYGTFVSAFCLLVLACGDGT*SLSGIS Trigger: GGAGATTCCTGAAAGACTGCAGGTTCCATCACCACA...TGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCTTCATATTTCTCCTGTaGAGACATAAACACCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFMEHLSQLSVYLSLQLFIFLL*RHKHQA Trigger: GGCCTGGTGTTTATGTCTCCACAGGAGAAATATGAA...GAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212711.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCCTCTTCCTTGAGTCTTaGAGTTCATTTTGGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: HFILWNICLSFLSTCPCSLFLES*SSFWRL Trigger: AAGTCTCCAAAATGAACTTCAAGACTCAAGGAAGAG...GCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTTGATTGTAATAGATaGAGCCCTTCCCATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLYFMEHLSQLSVYLSLQLDCNR*SPSHVS Trigger: AGAGACATGGGAAGGGCTCCATCTATTACAATCAAG...CTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCAGACCTTCATACACATaGCCATTCTTGAAGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LYFMEHLSQLSVYLSLQLRPSYT*PFLKVI Trigger: AATGACCTTCAAGAATGGCCATGTGTATGAAGGTCT...GAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR GCA 90 bp | GCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTTCATCTGGTCAAACATaGAGCAGAGAGAGAAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ANTLFYGTFVSAFCLLVLSSGQT*SRERSI Trigger: TATGCTTCTCTCTCTGCTGCATGTTTGACCAGATGA...AAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CCA 90 bp | CAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGTTGTTTCGAGGCTTCTaGGTTATCAGAAATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTLYFMEHLSQLSVYLSLLFRGF*VIRNGG Trigger: TCCTCCATTTCTGATAACCCAGAAGCCTCGAAACAA...CAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTCCACTTCTTGCTTACTaGCATTGCTATCTTGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CKHFILWNICLSFLSTCPPLLAY*HCYLVS Trigger: CGAAACAAGATAGCAATGCCAGTAAGCAAGAAGTGG...AGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR TCA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAAGAACTGTGCAATGTaGTCATTGGAAAACAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KHFILWNICLSFLSTCPCKNCAM*SLENRP Trigger: AGGTCTGTTTTCCAATGATCACATTGCACAGTTCTT...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTATGTTGTTCTCCCACTaGCCTTCATATATGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKHFILWNICLSFLSTCPMLFSH*PSYMFP Trigger: AGGAAACATATATGAAGGGCAGTGGGAGAACAACAT...AGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTGTTCTAAATGGAGAGTaGATTTCTTCGATTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CKHFILWNICLSFLSTCPVLNGE*ISSIGM Trigger: CATCCCAATCGAAGAAATCCACTCTCCATTTAGAAC...AGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CCA 90 bp | CAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGGTTCTAAATGGAGAGTaGATTTCTTCGATTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QTLYFMEHLSQLSVYLSLVLNGE*ISSIGM Trigger: CATCCCAATCGAAGAAATCCACTCTCCATTTAGAAC...CAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR TCA 90 bp | GCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTTGTTCACCCATATGTTaGGTTTCTCTTTCTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ANTLFYGTFVSAFCLLVLCSPIC*VSLSVH Trigger: ATGAACAGAAAGAGAAACTCAACATATGGGTGAACA...AAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTGTGCAATGTGATCATTaGAAAACAGACCTTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: CKHFILWNICLSFLSTCPVQCDH*KTDLHT Trigger: TGTATGAAGGTCTGTTTTCCAATGATCACATTGCAC...AGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS GCA 90 bp | AGGGTCTCAGGCTCCCTGACAGCACTGACTGAAGACCCCCGAGGCTaGCGGCTCCTTTGCGAGGCATCTGACCAACGGTCCAGGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RVSGSLTALTEDPRG*RLLCEASDQRSRLC Trigger: ACAGAGCCTGGACCGTTGGTCAGATGCCTCGCAAAGGAGCCGGCAGCCTCGGGGGTCTTCAGTCAGTGCTGTCAGGGAGCCTGAGACCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS CCA 90 bp | CGAAGTCTTGTTTCCTGGCCTCCTCTTCCCGTAGGATGTTCAGCCTaGCTTCTAGCTCTTCGTTCTCTATCTGCCTCTGCTGAGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSLVSWPPLPVGCSA*LLALRSLSASAEPA Trigger: AGCTGGCTCAGCAGAGGCAGATAGAGAACGAAGAGCTAGAAGCCAGGCTGAACATCCTACGGGAAGAGGAGGCCAGGAAACAAGACTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS GCA 90 bp | ATCCTCCTTAGCTCTGTGATGTTCCTCAGGACTGCGTATTCCACCTaGTTCTTTTCCTCCTCCTGGCTTTCCTCGGGGTACATGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILLSSVMFLRTAYST*FFSSSWLSSGYMSS Trigger: GCTGGACATGTACCCCGAGGAAAGCCAGGAGGAGGAAAAGAAGCAGGTGGAATACGCAGTCCTGAGGAACATCACAGAGCTAAGGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS TCA 90 bp | GGGCTCTTCGTACTGAGTCTCCTCTTCACTCTGCTCCATTTGTACTaGGTCTCTTTTCGGGGCTTGCTTGAGTGGTGTTTCCACGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLFVLSLLFTLLHLY*VSFRGLLEWCFHDW Trigger: CCAGTCGTGGAAACACCACTCAAGCAAGCCCCGAAAAGAGACTCAGTACAAATGGAGCAGAGTGAAGAGGAGACTCAGTACGAAGAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000169758.2 |
||
| CDS GCA 90 bp | GAGACTTTGTCCTCACTCAGCGACTTCTTGAGCTTGGGCTCTGACTaGCTGATTTTACCATCAGGCAGAGCGCCTATCTTGTCTAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ETLSSLSDFLSLGSD*LILPSGRAPILSKD Trigger: GTCCTTAGACAAGATAGGCGCTCTGCCTGATGGTAAAATCAGGCAGTCAGAGCCCAAGCTCAAGAAGTCGCTGAGTGAGGACAAAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CAA 90 bp | TTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATCCCCTGCCCTGCTTTTaGTTGGAAGCCCACTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FMEHLSQLSVYLSLQLDHPLPCF*LEAHSP Trigger: GGGAGAGTGGGCTTCCAACAAAAAGCAGGGCAGGGG...ATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACCATGGTCAAGTTCGAAGTCTaGTTTCCTGGCCTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWNICLSFLSTCPCSSTMVKFEV*FPGLLF Trigger: GAAGAGGAGGCCAGGAAACAAGACTTCGAACTTGAC...CATGGTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS TCA 90 bp | TCATATTTCTCACCCTGTGGAGACATAAACACCAGGCCTCTTCCTTaGGTCTTGAAGTTCATTTTGGAGACTTTGTCCTCACTCAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SYFSPCGDINTRPLP*VLKFILETLSSLSD Trigger: GTCGCTGAGTGAGGACAAAGTCTCCAAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGTGTTTATGTCTCCACAGGGTGAGAAATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CAA 90 bp | TATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACAGCGACTTCTTGAGCTaGGGCTCTGACTGCCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: YFMEHLSQLSVYLSLQLDSDFLS*GSDCLI Trigger: AATCAGGCAGTCAGAGCCCAAGCTCAAGAAGTCGCT...GTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CAA 90 bp | TTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGAACTGGGGGCCACTTCTaGCTTACTGGCATTGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: LFYGTFVSAFCLLVLAARTGGHF*LTGIAI Trigger: GATAGCAATGCCAGTAAGCAAGAAGTGGCCCCCAGT...TCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CAA 90 bp | AACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCATCCCCATGGCGCATGTaGTTCTCCCACTGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTLFYGTFVSAFCLLVLASPWRM*FSHCPS Trigger: TGAAGGGCAGTGGGAGAACAACATGCGCCATGGGGA...TGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CAA 90 bp | TATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGACTACACATGGCCATTCTaGAAGGTCATTCTGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFMEHLSQLSVYLSLQLDYTWPF*KVILPL Trigger: CAGGGGCAGAATGACCTTCAAGAATGGCCATGTGTA...GTCGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCAGCGACTTCTTGAGCTaGGGCTCTGACTGCCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LYFMEHLSQLSVYLSLQLSDFLS*GSDCLI Trigger: AATCAGGCAGTCAGAGCCCAAGCTCAAGAAGTCGCT...GAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS TCA 90 bp | TTTTCATATTTCTCCTGTGGAGACATAAACACCAGGCCTCTTCCTTaGGTCTTGAAGTTCATTTTGGAGACTTTGTCCTCACTCAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FSYFSCGDINTRPLP*VLKFILETLSSLSD Trigger: GTCGCTGAGTGAGGACAAAGTCTCCAAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGTGTTTATGTCTCCACAGGAGAAATATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212711.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCCCAAATGTAAGTGCCTaGTCCATGCATCAGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYFMEHLSQLSVYLSLQLPNVSA*SMHQSF Trigger: GAAGGACTGATGCATGGACAAGGCACTTACATTTGG...GAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CAA 90 bp | CAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCACTTCTTCTTCTTCTaGCCAGGGCTGGCCTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QTLYFMEHLSQLSVYLSLHFFFF*PGLALL Trigger: TAGCAAGGCCAGCCCTGGCAAGAAGAAGAAGAAGTG...CAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CAA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCCACTTCTTCTTCTTCTaGCCAGGGCTGGCCTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KHFILWNICLSFLSTCPCHFFFF*PGLALL Trigger: TAGCAAGGCCAGCCCTGGCAAGAAGAAGAAGAAGTG...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
||
| CDS-3UTR CAA 90 bp | ACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGACTGGCATTGCTATCTaGTTTCGAGGCTTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLYFMEHLSQLSVYLSLQTGIAI*FRGFWV Trigger: AACCCAGAAGCCTCGAAACAAGATAGCAATGCCAGT...CTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
||
| CDS-3UTR CAA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCGTAGGTGTTTCCGCCTaGAAAGACAGCAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KHFILWNICLSFLSTCPCVGVSA*KDSKAF Trigger: GAAGGCTTTGCTGTCTTTCAAGGCGGAAACACCTAC...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR CAA 90 bp | CACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCCACCAGGCCTCTTCCTaGAGTCTTGAAGTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: HFILWNICLSFLSTCPCSHQASS*SLEVHF Trigger: AAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGTG...GCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTCGCACCAGGCCTCTTCCTaGAGTCTTGAAGTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: FILWNICLSFLSTCPCSSHQASS*SLEVHF Trigger: AAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGTG...CGAGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CAA 90 bp | CAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGGTCAAGTTCGAAGTCTaGTTTCCTGGCCTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: QTLYFMEHLSQLSVYLSLVKFEV*FPGLLF Trigger: GAAGAGGAGGCCAGGAAACAAGACTTCGAACTTGAC...CAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTGTCTTGAAGTTCATTTaGGAGACTTTGTCCTCACTC | + |
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Preference number: 5 (lower is better) Translates to: TLFYGTFVSAFCLLVLAAVLKFI*ETLSSL Trigger: GAGTGAGGACAAAGTCTCCAAAATGAACTTCAAGAC...AGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CAA 90 bp | AAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCGTAGTAAAATTTCCCTaGTCCATGACGGAAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: KHFILWNICLSFLSTCPCVVKFP*SMTEAI Trigger: AATGGCTTCCGTCATGGACAAGGGAAATTTTACTAC...GCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS-3UTR CAA 90 bp | CAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGGTCTTGAAGTTCATTTaGGAGACTTTGTCCTCACTC | + |
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Preference number: 5 (lower is better) Translates to: QTLYFMEHLSQLSVYLSLVLKFI*ETLSSL Trigger: GAGTGAGGACAAAGTCTCCAAAATGAACTTCAAGAC...CAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGCAGCTTTGTTCACCCATATGTaGAGTTTCTCTTTCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TLFYGTFVSAFCLLVLAALFTHM*SFSFCS Trigger: TGAACAGAAAGAGAAACTCAACATATGGGTGAACAA...AGCTGCAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS-3UTR CAA 90 bp | CAAACACTTTATTTTATGGAACATTTGTCTCAGCTTTCTGTCTACTTGTCCTTGTTGTTCACCCATATGTaGAGTTTCTCTTTCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: QTLYFMEHLSQLSVYLSLLFTHM*SFSFCS Trigger: TGAACAGAAAGAGAAACTCAACATATGGGTGAACAA...CAAGGACAAGTAGACAGAAAGCTGAGACAAATGTTCCATAAAATAAAGTGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS TCA 72 bp | CTTCCGCAGGGTCTCAGGCTCCCTGACAGCACTGACTaGAGACCCCCGAGGCTGCCGGCTCCTTTGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LPQGLRLPDSTD*RPPRLPAPLRG Trigger: GCCTCGCAAAGGAGCCGGCAGCCTCGGGGGTCTTCAGTCAGTGCTGTCAGGGAGCCTGAGACCCTGCGGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS GCA 72 bp | GGCTCCCTGACAGCACTGACTGAAGACCCCCGAGGCTaGCGGCTCCTTTGCGAGGCATCTGACCAACGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GSLTALTEDPRG*RLLCEASDQRS Trigger: GGACCGTTGGTCAGATGCCTCGCAAAGGAGCCGGCAGCCTCGGGGGTCTTCAGTCAGTGCTGTCAGGGAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS TCA 72 bp | CCTTCTCCCAGTGGCCCGTGTACTCCTCGTTTGTTGTaGGCCACCTCATTCTGCCTTCCCCATGGCGCATGT | + |
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Preference number: 6 (lower is better) Translates to: PSPSGPCTPRLL*ATSFCLPHGAC Trigger: ACATGCGCCATGGGGAAGGCAGAATGAGGTGGCTCACAACAAACGAGGAGTACACGGGCCACTGGGAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS CCA 72 bp | GCTGGGCGTGAGAGGCTGAGAGGCTGGGATCTCCGATaGCTCCTTGAGCACAGTGATGTCAAGTTCGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: AGRERLRGWDLR*LLEHSDVKFEV Trigger: GACTTCGAACTTGACATCACTGTGCTCAAGGAGCCATCGGAGATCCCAGCCTCTCAGCCTCTCACGCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS CCA 72 bp | TGTGTTCCAAAGCCATTCTGGATCCCCTTCTCCCAGTaGCCCGTGTACTCCTCGTTTGTTGTGAGCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: CVPKPFWIPFSQ*PVYSSFVVSHL Trigger: GAGGTGGCTCACAACAAACGAGGAGTACACGGGCCACTGGGAGAAGGGGATCCAGAATGGCTTTGGAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS GCA 72 bp | AGCTCTGTGATGTTCCTCAGGACTGCGTATTCCACCTaGTTCTTTTCCTCCTCCTGGCTTTCCTCGGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SSVMFLRTAYST*FFSSSWLSSGY Trigger: GTACCCCGAGGAAAGCCAGGAGGAGGAAAAGAAGCAGGTGGAATACGCAGTCCTGAGGAACATCACAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS CCA 72 bp | GTTTCCTGGCCTCCTCTTCCCGTAGGATGTTCAGCCTaGCTTCTAGCTCTTCGTTCTCTATCTGCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VSWPPLPVGCSA*LLALRSLSASA Trigger: AGCAGAGGCAGATAGAGAACGAAGAGCTAGAAGCCAGGCTGAACATCCTACGGGAAGAGGAGGCCAGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS GCA 72 bp | TCCTCACTCAGCGACTTCTTGAGCTTGGGCTCTGACTaGCTGATTTTACCATCAGGCAGAGCGCCTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSLSDFLSLGSD*LILPSGRAPIL Trigger: CAAGATAGGCGCTCTGCCTGATGGTAAAATCAGGCAGTCAGAGCCCAAGCTCAAGAAGTCGCTGAGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS CAA 90 bp | TTGGGCTCTGACTGCCTGATTTTACCATCAGGCAGAGCGCCTATCTaGTCTAAGGACGACTTGGTGCTGCTGAAGTGGACTTCGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LGSDCLILPSGRAPI*SKDDLVLLKWTSES Trigger: TGACTCCGAAGTCCACTTCAGCAGCACCAAGTCGTCCTTAGACAAGATAGGCGCTCTGCCTGATGGTAAAATCAGGCAGTCAGAGCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS TCA 72 bp | TTTGTCCTCACTCAGCGACTTCTTGAGCTTGGGCTCTaGCTGCCTGATTTTACCATCAGGCAGAGCGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: FVLTQRLLELGL*LPDFTIRQSAY Trigger: ATAGGCGCTCTGCCTGATGGTAAAATCAGGCAGTCAGAGCCCAAGCTCAAGAAGTCGCTGAGTGAGGACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS GCA 72 bp | ACATGGCCATTCTTGAAGGTCATTCTGCCCCTGCCCTaGTTTTTGTTGGAAGCCCACTCTCCCTCATACATG | + |
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Preference number: 6 (lower is better) Translates to: TWPFLKVILPLP*FLLEAHSPSYM Trigger: CATGTATGAGGGAGAGTGGGCTTCCAACAAAAAGCAGGGCAGGGGCAGAATGACCTTCAAGAATGGCCATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS CAA 72 bp | GACTGCCTGATTTTACCATCAGGCAGAGCGCCTATCTaGTCTAAGGACGACTTGGTGCTGCTGAAGTGGACT | + |
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Preference number: 6 (lower is better) Translates to: DCLILPSGRAPI*SKDDLVLLKWT Trigger: AGTCCACTTCAGCAGCACCAAGTCGTCCTTAGACAAGATAGGCGCTCTGCCTGATGGTAAAATCAGGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS CAA 90 bp | CTGATTTTACCATCAGGCAGAGCGCCTATCTTGTCTAAGGACGACTaGGTGCTGCTGAAGTGGACTTCGGAGTCATGGCTTGTGATTGCA | + |
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Preference number: 6 (lower is better) Translates to: LILPSGRAPILSKDD*VLLKWTSESWLVIA Trigger: TGCAATCACAAGCCATGACTCCGAAGTCCACTTCAGCAGCACCAAGTCGTCCTTAGACAAGATAGGCGCTCTGCCTGATGGTAAAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS GCA 72 bp | CTCTTCGTTCTCTATCTGCCTCTGCTGAGCCAGCTCTaGTTCCTGGAGCTGATTTTCCTTCACTTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LFVLYLPLLSQL*FLELIFLHFLL Trigger: AAGGAGAAAGTGAAGGAAAATCAGCTCCAGGAAGCAGAGCTGGCTCAGCAGAGGCAGATAGAGAACGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS CAA 72 bp | TTGGAGACTTTGTCCTCACTCAGCGACTTCTTGAGCTaGGGCTCTGACTGCCTGATTTTACCATCAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LETLSSLSDFLS*GSDCLILPSGR Trigger: TCTGCCTGATGGTAAAATCAGGCAGTCAGAGCCCAAGCTCAAGAAGTCGCTGAGTGAGGACAAAGTCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000212711.2 |
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| CDS TCA 72 bp | GTACTGAGTCTCCTCTTCACTCTGCTCCATTTGTACTaGGTCTCTTTTCGGGGCTTGCTTGAGTGGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VLSLLFTLLHLY*VSFRGLLEWCF Trigger: GAAACACCACTCAAGCAAGCCCCGAAAAGAGACTCAGTACAAATGGAGCAGAGTGAAGAGGAGACTCAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000169758.2 |
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| CDS CAA 72 bp | ACTGGGGGCCACTTCTTGCTTACTGGCATTGCTATCTaGTTTCGAGGCTTCTGGGTTATCAGAAATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: TGGHFLLTGIAI*FRGFWVIRNGG Trigger: TCCTCCATTTCTGATAACCCAGAAGCCTCGAAACAAGATAGCAATGCCAGTAAGCAAGAAGTGGCCCCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166847.8 ENSMUST00000169758.2 |
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| CDS TCA 72 bp | TCACCCTGTGGAGACATAAACACCAGGCCTCTTCCTTaGGTCTTGAAGTTCATTTTGGAGACTTTGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SPCGDINTRPLP*VLKFILETLSS Trigger: TGAGGACAAAGTCTCCAAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGTGTTTATGTCTCCACAGGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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| CDS TCA 72 bp | TTCTCCTGTGGAGACATAAACACCAGGCCTCTTCCTTaGGTCTTGAAGTTCATTTTGGAGACTTTGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: FSCGDINTRPLP*VLKFILETLSS Trigger: TGAGGACAAAGTCTCCAAAATGAACTTCAAGACTCAAGGAAGAGGCCTGGTGTTTATGTCTCCACAGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212711.2 |
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| CDS CCA 72 bp | CTGTTCATCTTTGGGCTTTTCATATTTCTCACCCTGTaGAGACATAAACACCAGGCCTCTTCCTTGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LFIFGLFIFLTL*RHKHQASSLSL Trigger: AAGACTCAAGGAAGAGGCCTGGTGTTTATGTCTCCACAGGGTGAGAAATATGAAAAGCCCAAAGATGAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166847.8 |
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