Pregenerated sensors for RSL24D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032215Ensembl transcript IDs: ENSMUST00000034738.14, ENSMUST00000113505.4, ENSMUST00000169399.8
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAACCCAGCCCACCTCCAACATCACAGCTGCAGGCTGAATGGCTaGAGCAGGTCAGACGGCCCAACAAAACTAAGCTGTGCTGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: NNPAHLQHHSCRLNG*SRSDGPTKLSCAVL Trigger: CAACACAGCACAGCTTAGTTTTGTTGGGCCGTCTGACCTGCTTCAGCCATTCAGCCTGCAGCTGTGATGTTGGAGGTGGGCTGGGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| 3UTR CCA 90 bp | TGGGCAGGAAGGAAAGGAGAATCTTTCCGGACAGATGTCACAACCTaGACATTCAGGCAAAGTTTAACAACCCAGCCCACCTCCAACATC | + |
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Preference number: 1 (lower is better) Translates to: WAGRKGESFRTDVTT*TFRQSLTTQPTSNI Trigger: GATGTTGGAGGTGGGCTGGGTTGTTAAACTTTGCCTGAATGTCCAGGTTGTGACATCTGTCCGGAAAGATTCTCCTTTCCTTCCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| 3UTR GCA 90 bp | ATCATTCGGATTTCACACAGGAAGACAACTGGCTCAACCATTTTATaGCCACAGTTCATGTCTTCATCTACACACAAACTTTCCTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: IIRISHRKTTGSTIL*PQFMSSSTHKLSCL Trigger: CAAACAGGAAAGTTTGTGTGTAGATGAAGACATGAACTGTGGGCATAAAATGGTTGAGCCAGTTGTCTTCCTGTGTGAAATCCGAATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGGGCCGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTTGCGGGCCACCTGACCTTGCGTaGGTTTCTCTTCTTCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LRGRKSPLHSSVLRAGCGPPDLA*VSLLLK Trigger: TTTAAGAAGAAGAGAAACCCACGCAAGGTCAGGTGG...CCCGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCGGCCCCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113505.4 |
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| 3UTR-3UTR CCA 90 bp | CGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTTGCGGGCAGCACCGTATGTCCTGCACCTTCTaGAGCTCTTTGTTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RKSPLHSSVLRAGCGQHRMSCTF*SSLFFF Trigger: GAAGAAGAACAAAGAGCTCCAGAAGGTGCAGGACAT...ACGGTGCTGCCCGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113505.4 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAACATCACAGCTGCAGGCTGAATGGCTGAAGCAGGTCAGACGGCCCAACGAACAGTCAGTTCCTTaGGTGACCTCCATCTCAATA | + |
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Preference number: 2 (lower is better) Translates to: PPTSQLQAEWLKQVRRPNEQSVP*VTSISI Trigger: TATTGAGATGGAGGTCACGCAAGGAACTGACTGTTC...GTTGGGCCGTCTGACCTGCTTCAGCCATTCAGCCTGCAGCTGTGATGTTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| 3UTR-3UTR GCA 90 bp | GAACCAATGAATAACTTAGGGGCCGAAAGTCTCCACTCCACTCCAGCGTGCTCAACCTCCTTGATGTCCTaGACCTTCTGGAGCTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: EPMNNLGAESLHSTPACSTSLMS*TFWSSL Trigger: CAAAGAGCTCCAGAAGGTGCAGGACATCAAGGAGGT...TGAGCACGCTGGAGTGGAGTGGAGACTTTCGGCCCCTAAGTTATTCATTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113505.4 |
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| 3UTR CAA 90 bp | TTATGCCCACAGTTCATGTCTTCATCTACACACAAACTTTCCTGTTaGCGTGCGCATAACACAGTGAAGCAGAGTGCTGAGCTGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: LCPQFMSSSTHKLSC*RAHNTVKQSAELRP Trigger: AGGTCTCAGCTCAGCACTCTGCTTCACTGTGTTATGCGCACGCAAACAGGAAAGTTTGTGTGTAGATGAAGACATGAACTGTGGGCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| 3UTR CCA 72 bp | CCGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTaGTTGCGGGCAGCACCGTTAGGAAGCTTCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PKVSTPLQRAQG*LRAAPLGSFLH Trigger: ATGGAGGAAGCTTCCTAACGGTGCTGCCCGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113505.4 |
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| 3UTR TCA 72 bp | ACAACCCAGCCCACCTCCAACATCACAGCTGCAGGCTaGATGGCTGAAGCAGGTCAGACGGCCCAACAAAAC | + |
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Preference number: 3 (lower is better) Translates to: TTQPTSNITAAG*MAEAGQTAQQN Trigger: GTTTTGTTGGGCCGTCTGACCTGCTTCAGCCATTCAGCCTGCAGCTGTGATGTTGGAGGTGGGCTGGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| 3UTR GCA 72 bp | CTGAAGCAGGTCAGACGGCCCAACAAAACTAAGCTGTaGTGTGTTGTGTGCTGCCATTATGCAACTGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LKQVRRPNKTKL*CVVCCHYATVR Trigger: TCTGACAGTTGCATAATGGCAGCACACAACACAGCACAGCTTAGTTTTGTTGGGCCGTCTGACCTGCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR GCA 90 bp | GCCGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTTGCGGGCAGCACCACCTCCTTGATGTCCTaGACCTTCTGGAGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: AESLHSTPACSGLVAGSTTSLMS*TFWSSL Trigger: CAAAGAGCTCCAGAAGGTGCAGGACATCAAGGAGGT...GGTGCTGCCCGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| 3UTR CAA 72 bp | AAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTaGCGGGCAGCACCGTTAGGAAGCTTCCTCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: KVSTPLQRAQGW*RAAPLGSFLHV Trigger: GACATGGAGGAAGCTTCCTAACGGTGCTGCCCGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113505.4 |
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| CDS-3UTR GCA 90 bp | CCCAGCCCACCTCCAACATCACAGCTGCAGGCTGAATGGCTGAAGCAGGTCAGAACCTCCTTGATGTCCTaGACCTTCTGGAGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PSPPPTSQLQAEWLKQVRTSLMS*TFWSSL Trigger: CAAAGAGCTCCAGAAGGTGCAGGACATCAAGGAGGT...TCTGACCTGCTTCAGCCATTCAGCCTGCAGCTGTGATGTTGGAGGTGGGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR GCA 90 bp | GCCGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTTGCGGGCAGCACCTATGACACTTGGATTTaGAGAATCGGAACACCTACA | + |
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Preference number: 4 (lower is better) Translates to: AESLHSTPACSGLVAGSTYDTWI*RIGTPT Trigger: TGTAGGTGTTCCGATTCTGCAAATCCAAGTGTCATA...GGTGCTGCCCGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113505.4 |
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| CDS-3UTR GCA 90 bp | AATAACTTAGGGGCCGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTTATGAGATGGATGTTCTaGTTGACCTCCTTGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: NNLGAESLHSTPACSGLVMRWMF*LTSLMS Trigger: GGACATCAAGGAGGTCAAGCAGAACATCCATCTCAT...AACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCGGCCCCTAAGTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| 3UTR CAA 72 bp | GCTTTTACAGGCTGCAACGTTGAAGGGGGAAGCACATaGAATCACCCTTGTCTGAAGGACCTTATGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: AFTGCNVEGGST*NHPCLKDLMEP Trigger: TGGTTCCATAAGGTCCTTCAGACAAGGGTGATTCAATGTGCTTCCCCCTTCAACGTTGCAGCCTGTAAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034738.14 ENSMUST00000113505.4 ENSMUST00000169399.8 |
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| CDS-3UTR GCA 90 bp | TGTCTGAAGGACCTTATGGAACCAATGAATAACTTAGGGGCCGAAAGTCTCCACATGAGATGGATGTTCTaGTTGACCTCCTTGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: CLKDLMEPMNNLGAESLHMRWMF*LTSLMS Trigger: GGACATCAAGGAGGTCAAGCAGAACATCCATCTCAT...GTGGAGACTTTCGGCCCCTAAGTTATTCATTGGTTCCATAAGGTCCTTCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| CDS-3UTR CCA 90 bp | GCTTCTAGATCAATGCTGGGCAGGAAGGAAAGGAGAATCTTTCCGGACAGATGTTTCCACAGCTCACGCTaGTATTTCACAGGTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: ASRSMLGRKERRIFPDRCFHSSR*YFTGSF Trigger: AAATGAACCTGTGAAATACCAGCGTGAGCTGTGGAA...ACATCTGTCCGGAAAGATTCTCCTTTCCTTCCTGCCCAGCATTGATCTAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR CCA 90 bp | GGGGGAAGCACATTGAATCACCCTTGTCTGAAGGACCTTATGGAACCAATGAATATGTCCTGCACCTTCTaGAGCTCTTTGTTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GGSTLNHPCLKDLMEPMNMSCTF*SSLFFF Trigger: GAAGAAGAACAAAGAGCTCCAGAAGGTGCAGGACAT...ATTCATTGGTTCCATAAGGTCCTTCAGACAAGGGTGATTCAATGTGCTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| 3UTR CAA 72 bp | CAGTTCATGTCTTCATCTACACACAAACTTTCCTGTTaGCGTGCGCATAACACAGTGAAGCAGAGTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QFMSSSTHKLSC*RAHNTVKQSAE Trigger: CTCAGCACTCTGCTTCACTGTGTTATGCGCACGCAAACAGGAAAGTTTGTGTGTAGATGAAGACATGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| 3UTR CAA 72 bp | AGGTCAGACGGCCCAACAAAACTAAGCTGTGCTGTGTaGTGTGCTGCCATTATGCAACTGTCAGAAATTACT | + |
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Preference number: 4 (lower is better) Translates to: RSDGPTKLSCAV*CAAIMQLSEIT Trigger: AGTAATTTCTGACAGTTGCATAATGGCAGCACACAACACAGCACAGCTTAGTTTTGTTGGGCCGTCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR GCA 90 bp | ACGGAAAATAGTACATCATTCGGATTTCACACAGGAAGACAACTGGCTCAACCAAGAATCGGAACACCTTaGAATCGTTGCGGACGAACA | + |
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Preference number: 4 (lower is better) Translates to: TENSTSFGFHTGRQLAQPRIGTP*NRCGRT Trigger: TGTTCGTCCGCAACGATTGCAAGGTGTTCCGATTCT...TGGTTGAGCCAGTTGTCTTCCTGTGTGAAATCCGAATGATGTACTATTTTCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR CCA 90 bp | CTATCCCAACGCACGGAAAATAGTACATCATTCGGATTTCACACAGGAAGACAAATGTCCTGCACCTTCTaGAGCTCTTTGTTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSQRTENSTSFGFHTGRQMSCTF*SSLFFF Trigger: GAAGAAGAACAAAGAGCTCCAGAAGGTGCAGGACAT...TTGTCTTCCTGTGTGAAATCCGAATGATGTACTATTTTCCGTGCGTTGGGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCCATTATGCAACTGTCAGAAATTACTAAACATACTAGACCAAAACAAACCACCTGACCTTGCGTaGGTTTCTCTTCTTCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: VLPLCNCQKLLNILDQNKPPDLA*VSLLLK Trigger: TTTAAGAAGAAGAGAAACCCACGCAAGGTCAGGTGG...TTTGTTTTGGTCTAGTATGTTTAGTAATTTCTGACAGTTGCATAATGGCAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR CAA 90 bp | CCGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTTGCGGGCAGCACCGACACCTACAGGACACTaGCAATCGTTGCGGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: PKVSTPLQRAQGWLRAAPTPTGH*QSLRTN Trigger: GTTCGTCCGCAACGATTGCAAGTGTCCTGTAGGTGT...CGGTGCTGCCCGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113505.4 |
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| CDS-3UTR CAA 90 bp | AACTTAGGGGCCGAAAGTCTCCACTCCACTCCAGCGTGCTCAGGGCTGGTTGCGCAGAATCGGAACACCTaGCAATCGTTGCGGACGAAC | + |
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Preference number: 5 (lower is better) Translates to: NLGAESLHSTPACSGLVAQNRNT*QSLRTN Trigger: GTTCGTCCGCAACGATTGCAAGGTGTTCCGATTCTG...CGCAACCAGCCCTGAGCACGCTGGAGTGGAGTGGAGACTTTCGGCCCCTAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR CAA 90 bp | GTCAGACGGCCCAACAAAACTAAGCTGTGCTGTGTTGTGTGCTGCCATTATGCAACCTTCTGGAGCTCTTaGTTCTTCTTCAACCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VRRPNKTKLCCVVCCHYATFWSS*FFFNLF Trigger: GAACAGGTTGAAGAAGAACAAAGAGCTCCAGAAGGT...TGCATAATGGCAGCACACAACACAGCACAGCTTAGTTTTGTTGGGCCGTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034738.14 |
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| CDS-3UTR CAA 90 bp | GGGGGAAGCACATTGAATCACCCTTGTCTGAAGGACCTTATGGAACCAATGAATACCTTCTGGAGCTCTTaGTTCTTCTTCAACCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: GGSTLNHPCLKDLMEPMNTFWSS*FFFNLF Trigger: GAACAGGTTGAAGAAGAACAAAGAGCTCCAGAAGGT...ATTCATTGGTTCCATAAGGTCCTTCAGACAAGGGTGATTCAATGTGCTTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034738.14 ENSMUST00000169399.8 |
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