Pregenerated sensors for RSF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035623Ensembl transcript IDs: ENSMUST00000107153.3, ENSMUST00000123731.8, ENSMUST00000127891.3, ENSMUST00000135270.3
Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTTTCTCCGCAAACGCCTGCTTTGCCTCATTGGCCGAGAAGGATaGCGCCTCAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: VFLRKRLLCLIGREG*RLSLRLQKSVSLSS Trigger: TGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR GCA 90 bp | TCGGAGTACTTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTGCTTTaGCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: SEYFFFGVFLRKRLL*LIGREGCRLSLRLQ Trigger: CTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAGTACTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR GCA 90 bp | CGTCATCGGAGTACTTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTaGTTTGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGC | + |
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Preference number: 1 (lower is better) Translates to: RHRSTSSLGSFSANA*FASLAEKDAASVFG Trigger: GCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAGTACTCCGATGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR GCA 90 bp | TGCTTTGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTaGAGAAGTCAGTGTCGCTGTCCTCATTGGATGGTGGCTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: CFASLAEKDAASVFG*RSQCRCPHWMVALL Trigger: AAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR CCA 90 bp | CTTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCATTaGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCAGAAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: LLLWGLSPQTPALPH*PRRMPPQSSAAEVS Trigger: ACTGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR GCA 90 bp | TGCACTGGCTGTGCCATTGTCCTTGGGGGTTTGGGACTTTTCAGTTaGTTTGCCCATCAAGTTCTCAATGGCCTTGCCAGGGCTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: CTGCAIVLGGLGLFS*FAHQVLNGLARALS Trigger: GGACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAGCAACTGAAAAGTCCCAAACCCCCAAGGACAATGGCACAGCCAGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR GCA 90 bp | TGGCTGTGCCATTGTCCTTGGGGGTTTGGGACTTTTCAGTTGCTTTaGCCATCAAGTTCTCAATGGCCTTGCCAGGGCTCTGTCCATTGG | + |
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Preference number: 1 (lower is better) Translates to: WLCHCPWGFGTFQLL*PSSSQWPCQGSVHW Trigger: CCAATGGACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAGCAACTGAAAAGTCCCAAACCCCCAAGGACAATGGCACAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CCA 90 bp | TGCCCATCAAGTTCTCAATGGCCTTGCCAGGGCTCTGTCCATTGGTaGAAGGCAAGTCTACTAGGCTGTAGTCCAATGGGCTCCCTACTT | + |
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Preference number: 1 (lower is better) Translates to: CPSSSQWPCQGSVHW*KASLLGCSPMGSLL Trigger: AAGTAGGGAGCCCATTGGACTACAGCCTAGTAGACTTGCCTTCCACCAATGGACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CCA 90 bp | CTTTGCCCATCAAGTTCTCAATGGCCTTGCCAGGGCTCTGTCCATTaGTGGAAGGCAAGTCTACTAGGCTGTAGTCCAATGGGCTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: LCPSSSQWPCQGSVH*WKASLLGCSPMGSL Trigger: TAGGGAGCCCATTGGACTACAGCCTAGTAGACTTGCCTTCCACCAATGGACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR GCA 90 bp | CACTCTCGGATCCTTCACTTTCGTCATTGCTGGAGTATTTCCACCTaGCTCGTGTCCGAGAGCCAGTCCATCGAACTTTGCCTTTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: HSRILHFRHCWSIST*LVSESQSIELCLWV Trigger: AACCCAAAGGCAAAGTTCGATGGACTGGCTCTCGGACACGAGGCAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGGATCCGAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CCA 90 bp | GAAACCCCTATGGTGAGTGTGCCAGAACGGTCTCCTAGAGCAAAGTaGTATAAATGTGAGATAGGGCAGGGAGCTGTGTGCATGACCAGG | + |
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Preference number: 1 (lower is better) Translates to: ETPMVSVPERSPRAK*YKCEIGQGAVCMTR Trigger: CCTGGTCATGCACACAGCTCCCTGCCCTATCTCACATTTATACCACTTTGCTCTAGGAGACCGTTCTGGCACACTCACCATAGGGGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR CCA 90 bp | CTGCAGAGGATTTGTCACTCTCGGATCCTTCACTTTCGTCATTGCTaGAGTATTTCCACCTGCCTCGTGTCCGAGAGCCAGTCCATCGAA | + |
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Preference number: 1 (lower is better) Translates to: LQRICHSRILHFRHC*SISTCLVSESQSIE Trigger: TTCGATGGACTGGCTCTCGGACACGAGGCAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGGATCCGAGAGTGACAAATCCTCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CCA 90 bp | GCCGCCTCAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATTaGATGGTGGCTCTTCTTCACTTTCATCTGGATTTTCATCAGACA | + |
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Preference number: 1 (lower is better) Translates to: AASVFGCRSQCRCPH*MVALLHFHLDFHQT Trigger: TGTCTGATGAAAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR TCA 90 bp | CAGAAAACCCGAATATCAGGGCAAAAGCACACACTGAAGCAATGCTaGAGGCTTCAGATGTGCCAGGCAAGGCGAGTCACAAGTGCTACA | + |
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Preference number: 1 (lower is better) Translates to: QKTRISGQKHTLKQC*RLQMCQARRVTSAT Trigger: TGTAGCACTTGTGACTCGCCTTGCCTGGCACATCTGAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCCCTGATATTCGGGTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR GCA 90 bp | AAACACAGCAACATCAGTAACAGCCTAGACAACACCACAAAGTCATaGACGGGAAGAGTAATGCTGCTGGTTGCCAGGGTCTGCGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: KHSNISNSLDNTTKS*TGRVMLLVARVCVF Trigger: GAACACGCAGACCCTGGCAACCAGCAGCATTACTCTTCCCGTGCATGACTTTGTGGTGTTGTCTAGGCTGTTACTGATGTTGCTGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR CCA 90 bp | CCTCAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATTGGATaGTGGCTCTTCTTCACTTTCATCTGGATTTTCATCAGACACAAC | + |
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Preference number: 1 (lower is better) Translates to: PQSSAAEVSVAVLIG*WLFFTFIWIFIRHN Trigger: GTTGTGTCTGATGAAAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR GCA 90 bp | CACACAGAAGAATTAGTTCTGGATGGTTCGGAAGGCCACACTTTTTaGAAGGTTCATCGTCATCTGGAAGGACCGCTTCTTCACCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: HTEELVLDGSEGHTF*KVHRHLEGPLLHLP Trigger: AGGAAGGTGAAGAAGCGGTCCTTCCAGATGACGATGAACCTTGCAAAAAGTGTGGCCTTCCGAACCATCCAGAACTAATTCTTCTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR TCA 90 bp | TCCTTTCTTTCTTCATCCAAAATAGTAGAAATGTCTTTCCCACGGTaGCCTGTGATGGTGGAGATATCTTTCCCCCGGCCAACTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: SFLSSSKIVEMSFPR*PVMVEISFPRPTPP Trigger: AGGAGGAGTTGGCCGGGGGAAAGATATCTCCACCATCACAGGTCACCGTGGGAAAGACATTTCTACTATTTTGGATGAAGAAAGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR TCA 90 bp | TCTCTTCACTCTCTGAGCTGGAAAGTCTGCGCTTGTGAACTCGCCTaGTTTCTTTACCACGTCGTAGACTTTTCTGGGAACCATCACTTT | + |
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Preference number: 1 (lower is better) Translates to: SLHSLSWKVCACELA*FLYHVVDFSGNHHF Trigger: AAAGTGATGGTTCCCAGAAAAGTCTACGACGTGGTAAAGAAATCAGGCGAGTTCACAAGCGCAGACTTTCCAGCTCAGAGAGTGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR TCA 90 bp | GACATAAAGCTCTCTTCACTCTCTGAGCTGGAAAGTCTGCGCTTGTaGACTCGCCTGATTTCTTTACCACGTCGTAGACTTTTCTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: DIKLSSLSELESLRL*TRLISLPRRRLFWE Trigger: TTCCCAGAAAAGTCTACGACGTGGTAAAGAAATCAGGCGAGTTCACAAGCGCAGACTTTCCAGCTCAGAGAGTGAAGAGAGCTTTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CCA 90 bp | CAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATTGGATGGTaGCTCTTCTTCACTTTCATCTGGATTTTCATCAGACACAACAAA | + |
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Preference number: 1 (lower is better) Translates to: QSSAAEVSVAVLIGW*LFFTFIWIFIRHNK Trigger: TTTGTTGTGTCTGATGAAAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR CCA 90 bp | AGTGTCGCTGTCCTCATTGGATGGTGGCTCTTCTTCACTTTCATCTaGATTTTCATCAGACACAACAAACTCATCCTGAGATCCGTCACT | + |
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Preference number: 1 (lower is better) Translates to: SVAVLIGWWLFFTFI*IFIRHNKLILRSVT Trigger: AGTGACGGATCTCAGGATGAGTTTGTTGTGTCTGATGAAAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR TCA 90 bp | ACATTATTAAGATCAGAACACCTCCACGAACTGAAACCCCTATGGTaGGTGTGCCAGAACGGTCTCCTAGAGCAAAGTGGTATAAATGTG | + |
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Preference number: 1 (lower is better) Translates to: TLLRSEHLHELKPLW*VCQNGLLEQSGINV Trigger: CACATTTATACCACTTTGCTCTAGGAGACCGTTCTGGCACACTCACCATAGGGGTTTCAGTTCGTGGAGGTGTTCTGATCTTAATAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR GCA 90 bp | CTTCGCTCTGCACGCTCTTTCTTCTTTAAGGCGACGTCCAAATCTTaGAGCTGTTCTTCTAACTTTTCACACAGTAGTTTATGTTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LRSARSFFFKATSKS*SCSSNFSHSSLCWQ Trigger: TTGCCAACATAAACTACTGTGTGAAAAGTTAGAAGAACAGCTGCAAGATTTGGACGTCGCCTTAAAGAAGAAAGAGCGTGCAGAGCGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CCA 90 bp | AACTGGTACCAATACATGAGGCCATCTTTGTCTCGCCCAATTGGCTaGAGACGCATAGTATCAGCATCCTCCTCATTAATTATATTCTTG | + |
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Preference number: 1 (lower is better) Translates to: NWYQYMRPSLSRPIG*RRIVSASSSLIIFL Trigger: CAAGAATATAATTAATGAGGAGGATGCTGATACTATGCGTCTCCAGCCAATTGGGCGAGACAAAGATGGCCTCATGTATTGGTACCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
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| 3UTR TCA 90 bp | ACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATATCGTTaGGCATCTGTTCTAAAGCTCAGATACCACCCTGAACTAAAGACC | + |
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Preference number: 1 (lower is better) Translates to: TQNVCMHTFPRKKYR*ASVLKLRYHPELKT Trigger: GGTCTTTAGTTCAGGGTGGTATCTGAGCTTTAGAACAGATGCTCAACGATATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR TCA 90 bp | GGTATTAATCTAATCTCAGGGTCTGTCCACACAGCAGTGCACGATTaGCATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: GINLISGSVHTAVHD*HAPTLAKGKYNEKD Trigger: GTCTTTTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTGTGTGGACAGACCCTGAGATTAGATTAATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR CCA 90 bp | AAATCTTGCAGCTGTTCTTCTAACTTTTCACACAGTAGTTTATGTTaGCAAGGAGGGCAGAACCATTCTCCATCAGGGATAATCATCAGC | + |
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Preference number: 1 (lower is better) Translates to: KSCSCSSNFSHSSLC*QGGQNHSPSGIIIS Trigger: GCTGATGATTATCCCTGATGGAGAATGGTTCTGCCCTCCTTGCCAACATAAACTACTGTGTGAAAAGTTAGAAGAACAGCTGCAAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CCA 90 bp | AAACCCATCAGTGTCACTTTCATACACTGTTTCAATTCTAAGTTCTaGAACTGTAAAAATCTGGCTACCTCTCACACCTTACTGAAATCG | + |
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Preference number: 1 (lower is better) Translates to: KPISVTFIHCFNSKF*NCKNLATSHTLLKS Trigger: CGATTTCAGTAAGGTGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTATGAAAGTGACACTGATGGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR TCA 90 bp | GATTATATTCAAAATGGCATCCCAGATGGTGAACACCATGTGGCCTaGAGAGTTAACACTACTGTCAAGTTTATAGTGTACCTAGATTTT | + |
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Preference number: 1 (lower is better) Translates to: DYIQNGIPDGEHHVA*RVNTTVKFIVYLDF Trigger: AAAATCTAGGTACACTATAAACTTGACAGTAGTGTTAACTCTTCAGGCCACATGGTGTTCACCATCTGGGATGCCATTTTGAATATAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR CCA 90 bp | CTTATACATTTAGTAACTCAGTTCATGATGAATTCAGCATCCTTGTaGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: LIHLVTQFMMNSASL*LPRMCVCTHFLVRN Trigger: ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGCTGAATTCATCATGAACTGAGTTACTAAATGTATAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR TCA 90 bp | ATTCTTGTCACAAAGGGAACTCCACTCATCCCACATTACAATTACTaGCACATTCTCCATAATTATAACTCCCTATTTAAACAAGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: ILVTKGTPLIPHYNY*HILHNYNSLFKQAS Trigger: ACTTGCTTGTTTAAATAGGGAGTTATAATTATGGAGAATGTGTCAGTAATTGTAATGTGGGATGAGTGGAGTTCCCTTTGTGACAAGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTTGCCAGGGCTCTGTCCATTGGTGGAAGGCAAGTCTACTAGGCTGTAGTCTGAGGGCAGGGCACTaGGCTGGCTGTCACGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: WPCQGSVHWWKASLLGCSLRAGH*AGCHGQ Trigger: CTGCCCGTGACAGCCAGCCCAGTGCCCTGCCCTCAG...ACTACAGCCTAGTAGACTTGCCTTCCACCAATGGACAGAGCCCTGGCAAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CAA 90 bp | GCTCATCTTCATCTTCCTCTGGTGCCCCCACCTCCTGTCCACCACTaGTCCCATTGGGGGCTAGACTTGCACTGGCTGTGCCATTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AHLHLPLVPPPPVHH*SHWGLDLHWLCHCP Trigger: AGGACAATGGCACAGCCAGTGCAAGTCTAGCCCCCAATGGGACAAGTGGTGGACAGGAGGTGGGGGCACCAGAGGAAGATGAAGATGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCGGAGGCAGGCAGTATaGTATCCACTGTCGCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LAEKDAASVFGCRSQCRCRRQAV*YPLSQE Trigger: TTCTTGCGACAGTGGATACCATACTGCCTGCCTCCG...ACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CAA 90 bp | ACTTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCATaGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCAGAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TSSLGSFSANACFAS*AEKDAASVFGCRSQ Trigger: CTGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CAA 90 bp | ATCGGAGTACTTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTGCTTaGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: IGVLLLWGLSPQTPA*PHWPRRMPPQSSAA Trigger: TGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAGTACTCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR-3UTR CCA 90 bp | AAACGCCTGCTTTGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGAACAGCTTTACTAACTaGCCCGCTGGTGTGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: KRLLCLIGREGCRLSLRLNSFTN*PAGVRA Trigger: AGCTCTCACACCAGCGGGCCAGTTAGTAAAGCTGTT...CAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCATTGGCCGAGAAGGATGCCGCCCACAGTAGTTTATGTTaGCAAGGAGGGCAGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: GSFSANACFASLAEKDAAHSSLC*QGGQNH Trigger: ATGGTTCTGCCCTCCTTGCCAACATAAACTACTGTG...GGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CAA 90 bp | CTGGCTGTGCCATTGTCCTTGGGGGTTTGGGACTTTTCAGTTGCTTaGCCCATCAAGTTCTCAATGGCCTTGCCAGGGCTCTGTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: LAVPLSLGVWDFSVA*PIKFSMALPGLCPL Trigger: CAATGGACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAGCAACTGAAAAGTCCCAAACCCCCAAGGACAATGGCACAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CAA 90 bp | TTGCACTGGCTGTGCCATTGTCCTTGGGGGTTTGGGACTTTTCAGTaGCTTTGCCCATCAAGTTCTCAATGGCCTTGCCAGGGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LHWLCHCPWGFGTFQ*LCPSSSQWPCQGSV Trigger: GACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAGCAACTGAAAAGTCCCAAACCCCCAAGGACAATGGCACAGCCAGTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCGCTGTCCTCATTGGATGGTGGCTCTTCTTCACTTTCATCTGGATTTTCAGCCGGCGTTTCTTCCTaGGAGCAGCAGCTGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VSLSSLDGGSSSLSSGFSAGVSS*EQQLPS Trigger: AGAGGGCAGCTGCTGCTCGCAGGAAGAAACGCCGGC...TGAAAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGATCTTCATCTTCCTCTaGTGCCCCCACCTCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: STGAFSHPKFCFGPSQIWIFIFL*CPHLLS Trigger: GGACAGGAGGTGGGGGCACCAGAGGAAGATGAAGAT...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR CAA 90 bp | TGCCGCCTCAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATaGGATGGTGGCTCTTCTTCACTTTCATCTGGATTTTCATCAGAC | + |
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Preference number: 2 (lower is better) Translates to: CRLSLRLQKSVSLSS*DGGSSSLSSGFSSD Trigger: GTCTGATGAAAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
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| 3UTR-3UTR TCA 90 bp | TGCAGAAGTCAGTGTCGCTGTCCTCATTGGATGGTGGCTCTTCTTCACTTTCATACTGGCCCGCTGGTGTaGGAGCTACCGTGGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: CRSQCRCPHWMVALLHFHTGPLV*ELPWNK Trigger: TTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGT...ATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAAAAGCACACACTGAAGCAATGCTGAAGGCTTCAGATGTGCCAGGCAAGAACAGCTTTACTAACTaGCCCGCTGGTGTGAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RAKAHTEAMLKASDVPGKNSFTN*PAGVRA Trigger: AGCTCTCACACCAGCGGGCCAGTTAGTAAAGCTGTT...CTTGCCTGGCACATCTGAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGATCGCCTTCGCCGGGTTTCTACAAAATCATCACTAAAATCATCGCTAAAGCCTGCGAGCAGCAGCTaGCCTCTGGGGCCGTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: LDRLRRVSTKSSLKSSLKPASSS*PLGPFI Trigger: AATAAACGGCCCCAGAGGGCAGCTGCTGCTCGCAGG...CTTTAGCGATGATTTTAGTGATGATTTTGTAGAAACCCGGCGAAGGCGATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCAGGGCTCTGTCCATTGGTGGAAGGCAAGTCTACTAGGCTGTAGTCCAATGGTCCTCATTGGATGGTaGCTCTTCTTCACTTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: CQGSVHWWKASLLGCSPMVLIGW*LFFTFI Trigger: GATGAAAGTGAAGAAGAGCCACCATCCAATGAGGAC...CATTGGACTACAGCCTAGTAGACTTGCCTTCCACCAATGGACAGAGCCCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCTGTGCCATTGTCCTTaGGGGTTTGGGACTTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: STGAFSHPKFCFGPSQIWLCHCP*GFGTFQ Trigger: CTGAAAAGTCCCAAACCCCCAAGGACAATGGCACAG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGAAGGACTGAAGCCTTCTaGGAGTGTAGGAAGAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: KHLPSMHEALDSISSMNRRTEAF*ECRKNH Trigger: GTGGTTCTTCCTACACTCTCAGAAGGCTTCAGTCCT...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR GCA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGAACAGGGCTAGGGCTGTaGCTGAACTTTCACAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: KHLPSMHEALDSISSMNRTGLGL*LNFHNC Trigger: ACAGTTGTGAAAGTTCAGGCACAGCCCTAGCCCTGT...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 90 bp | TCACACAGAAGAATTAGTTCTGGATGGTTCGGAAGGCCACACTTTTaGCAAGGTTCATCGTCATCTGGAAGGACCGCTTCTTCACCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SHRRISSGWFGRPHF*QGSSSSGRTASSPS Trigger: GGAAGGTGAAGAAGCGGTCCTTCCAGATGACGATGAACCTTGCAAAAAGTGTGGCCTTCCGAACCATCCAGAACTAATTCTTCTGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGATCGCCTTCGCCGGGTTTCTACAAAATCATCACTAAAATCATCGCTAAAGTGGAGTATTTCCACCTaGCTCGTGTCCGAGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LDRLRRVSTKSSLKSSLKWSIST*LVSESQ Trigger: CTGGCTCTCGGACACGAGGCAGGTGGAAATACTCCA...CTTTAGCGATGATTTTAGTGATGATTTTGTAGAAACCCGGCGAAGGCGATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCAGCTGGCTCTGCAGTaGCTGCTTTCATTGTTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: STGAFSHPKFCFGPSQIWQLALQ*LLSLFY Trigger: ATAAAACAATGAAAGCAGCCACTGCAGAGCCAGCTG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCAGAAGTCAATCGAACTTTGCCTTTaGGTTTTACTTATGTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCLIGREGCRLSLRLQKSIELCL*VLLMSK Trigger: TTTGGACATAAGTAAAACCCAAAGGCAAAGTTCGAT...TGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CAA 90 bp | AGAAAAGTGAAATTCCTTGAGCCAGCAGCAGATACAGCATGTCTATaGCCGGCAACAGACAACACTGGGACAGAAAACCCGAATATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RKVKFLEPAADTACL*PATDNTGTENPNIR Trigger: CCTGATATTCGGGTTTTCTGTCCCAGTGTTGTCTGTTGCCGGCAATAGACATGCTGTATCTGCTGCTGGCTCAAGGAATTTCACTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATAGCCACAGCTGGCTCTaGAGTGGCTGCTTTCATTGT | + |
|
Preference number: 2 (lower is better) Translates to: CVRVCREVIHAMDESFGNSHSWL*SGCFHC Trigger: ACAATGAAAGCAGCCACTGCAGAGCCAGCTGTGGCT...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CCA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCAGGCAACAGACAACACTaGGACAGAAAACCCGAATAT | + |
|
Preference number: 2 (lower is better) Translates to: LPTRLNGILVTKGTPLIPGNRQH*DRKPEY Trigger: ATATTCGGGTTTTCTGTCCCAGTGTTGTCTGTTGCC...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 90 bp | CCGTCACTGATCTTGAATTCATCCTCACTCTCTTCTTCATCTAGGTaGCTATCACTGTCAAGATCATTAAGTCGCCGGCGTTTCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PSLILNSSSLSSSSR*LSLSRSLSRRRFFL Trigger: CAGGAAGAAACGCCGGCGACTTAATGATCTTGACAGTGATAGCAACCTAGATGAAGAAGAGAGTGAGGATGAATTCAAGATCAGTGACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
||
| 3UTR-3UTR GCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATACTCATTTCACTAACTaGCCACCTGGCCCAGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNTHFTN*PPGPAC Trigger: ACATGCTGGGCCAGGTGGGCAGTTAGTGAAATGAGT...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATGTGCATGACCAGGAGTaGGGAATTAGACCTCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: CVRVCREVIHAMDESFGNVHDQE*GIRPLF Trigger: GAACAGAGGTCTAATTCCCCACTCCTGGTCATGCAC...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAAGAACACCATGTGGCCTaGAGAGTTAACACTACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKEHHVA*RVNTTV Trigger: GACAGTAGTGTTAACTCTTCAGGCCACATGGTGTTC...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTGGCAAAAGCACACACTaGAGCAATGCTGAAGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VLELLLQLSSKNSSWRTIGKSTH*SNAEGF Trigger: GAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCC...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGAAAAGTGAAATTCCTTaGGCCAGCAGCAGATACAGC | + |
|
Preference number: 2 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQKSEIP*ASSRYS Trigger: GCTGTATCTGCTGCTGGCTCAAGGAATTTCACTTTT...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGAATCTTAAAGAAAAGTaGAATTCCTTGAGCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: STGAFSHPKFCFGPSQIWNLKEK*NSLSQQ Trigger: CTGCTGGCTCAAGGAATTTCACTTTTCTTTAAGATT...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | ATACATGAGGCCATCTTTGTCTCGCCCAATTGGCTGGAGACGCATAGTATCAGCAGATTGTCATCAAACTaGCACTCACAGAGATACTTT | + |
|
Preference number: 2 (lower is better) Translates to: IHEAIFVSPNWLETHSISRLSSN*HSQRYF Trigger: AAAGTATCTCTGTGAGTGTCAGTTTGATGACAATCT...GCTGATACTATGCGTCTCCAGCCAATTGGGCGAGACAAAGATGGCCTCATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCTCACAGATTTGGAATaGATTCATATCCACCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: STGAFSHPKFCFGPSQIWLTDLE*IHIHPF Trigger: AAAAGGGTGGATATGAATGCATTCCAAATCTGTGAG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107153.3 ENSMUST00000123731.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAATGGCATGTGTGTTGTTaGAAACACACGACTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKWHVCC*KHTTLQ Trigger: CTGCAGAGTCGTGTGTTTGCAACAACACACATGCCA...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTTCTTCTCCATCTCCCATGCCCAGGTACTGTTAAACTCTTGACAGATATGATCACCTGTTCGACTTaGATTTGCAGGTTCTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: AFLLHLPCPGTVKLLTDMITCST*ICRFFF Trigger: GAAGAAGAACCTGCAAATCCAAGTCGAACAGGTGAT...CATATCTGTCAAGAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAGAAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
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| 3UTR CAA 90 bp | CCTGTTCGACTTGGATTTGCAGGTTCTTCTTCTGTAAATGGAGGTTaGGGGCAAATAAAAGACAAGGAATGTGCCAATCACATACTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: PVRLGFAGSSSVNGG*GQIKDKECANHILA Trigger: AGCGAGTATGTGATTGGCACATTCCTTGTCTTTTATTTGCCCCAAACCTCCATTTACAGAAGAAGAACCTGCAAATCCAAGTCGAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGACTGGCCCGCTGGTGTaGGAGCTACCGTGGAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: AIINLQSSKLVTSQKDFKTGPLV*ELPWNK Trigger: TTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGT...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107153.3 ENSMUST00000123731.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTAGCATAAGTGGTTTTTaGAACCCAAGTCAGTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VLELLLQLSSKNSSWRTISISGF*NPSQWG Trigger: GCCCCACTGACTTGGGTTTCAAAAACCACTTATGCT...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAACTCACTCTGTACCCTTaGCCAAGTGGAAGAAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKLTLYP*PSGRSE Trigger: TTCACTTCTTCCACTTGGTCAAGGGTACAGAGTGAG...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTGAATTGATAGGTGGTTaGAAGAGCTGGTGTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLELLLQLSSKNSSWRTIELIGG*KSWCVQ Trigger: CTGCACACACCAGCTCTTGCAACCACCTATCAATTC...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTGTCTCGCCCAATTGGCTGGAGACGCATAGTATCAGCATCCTCCTCATTATGTTCGACTTGGATTTaGAGGTTCTTCTTCTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLSRPIGWRRIVSASSSLCSTWI*RFFFCK Trigger: TTTACAGAAGAAGAACCTGCAAATCCAAGTCGAACA...TAATGAGGAGGATGCTGATACTATGCGTCTCCAGCCAATTGGGCGAGACAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR-3UTR CCA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCACTCTTTATAGCCAGTTaGTCTAATGAGAATGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPTRLNGILVTKGTPLIPLFIAS*SNENVK Trigger: CTTTACATTCTCATTAGACCAACTGGCTATAAAGAG...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAAGCCTGTTCTAGACAGTaGAAAACTTCCTTAGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKACSRQ*KTSLAD Trigger: ATCAGCTAAGGAAGTTTTTCACTGTCTAGAACAGGC...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATCAACAGAAACCTCATTaGGAACATCTTCCAAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: CVRVCREVIHAMDESFGNQQKPH*EHLPSK Trigger: CTTACTTGGAAGATGTTCTCAATGAGGTTTCTGTTG...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGCTACAATACTCAAACTaGAACAGTACAGACATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQLQYSN*NSTDMN Trigger: GTTCATGTCTGTACTGTTGCAGTTTGAGTATTGTAG...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107153.3 ENSMUST00000123731.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGAAGGCGAGTCACAAGTaGTACAGCTGTACAGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AIINLQSSKLVTSQKDFKKASHK*YSCTGL Trigger: TAGCCCTGTACAGCTGTAGCACTTGTGACTCGCCTT...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTGGGGCATTTGCTAAGTaGAATACTCAGTCTTTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VLELLLQLSSKNSSWRTIGAFAK*NTQSLL Trigger: TAGCAAAGACTGAGTATTCCACTTAGCAAATGCCCC...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAATCTCCTAGAGCAAAGTaGTATAAATGTGAGATAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKSPRAK*YKCEIG Trigger: CCCTATCTCACATTTATACCACTTTGCTCTAGGAGA...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGCTTGTGAACTCGCCTaGTTTCTTTACCACGTCGTA | + |
|
Preference number: 2 (lower is better) Translates to: AIINLQSSKLVTSQKDFKACELA*FLYHVV Trigger: TACGACGTGGTAAAGAAATCAGGCGAGTTCACAAGC...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGACGCATAGTATCAGCATCCTCCTCATTAATTATATTCTTGAATTTAAGCTTCTCCATCTCCCATaGCCAGGTACTGTTAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: LETHSISILLINYILEFKLLHLP*PGTVKL Trigger: GAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAG...CTTAAATTCAAGAATATAATTAATGAGGAGGATGCTGATACTATGCGTCTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR-3UTR CCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATTCTGTTAGCACAATCTaGTTGTCAAAGCTTCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNSVSTI*LSKLHY Trigger: ATAATGAAGCTTTGACAACCAGATTGTGCTAACAGA...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 90 bp | ATATTAACAAACAAGGACTATGTAGATTACAGCATACATGTGGTCTaGGCATTCTCTGCTAAGAGAACCAGAAACGTCTTGAGAATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: ILTNKDYVDYSIHVV*AFSAKRTRNVLRMS Trigger: TGACATTCTCAAGACGTTTCTGGTTCTCTTAGCAGAGAATGCCAAGACCACATGTATGCTGTAATCTACATAGTCCTTGTTTGTTAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAATATATATTAGCTGCCTaGATTACTCTTTATAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKYILAA*ITLYSQ Trigger: CTGGCTATAAAGAGTAATCCAGGCAGCTAATATATA...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGCAGTCCATCGAACTTTaGCTTTGGGTTTTACTTATG | + |
|
Preference number: 2 (lower is better) Translates to: AIINLQSSKLVTSQKDFKQSIEL*LWVLLM Trigger: CATAAGTAAAACCCAAAGGCAAAGTTCGATGGACTG...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | CAGGGCACTGGGCTGGCTGTCACGGGCAGGCTGGTCTaGGTCCCCATGAGCATTGTCACAGCTCTCCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: QGTGLAVTGRLV*VPMSIVTALLV Trigger: GACGAGGAGAGCTGTGACAATGCTCATGGGGACGCAGACCAGCCTGCCCGTGACAGCCAGCCCAGTGCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | CGCAAACGCCTGCTTTGCCTCATTGGCCGAGAAGGATaGCGCCTCAGTCTTCGGCTGCAGAAGTCAGTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: RKRLLCLIGREG*RLSLRLQKSVS Trigger: CGACACTGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
||
| 3UTR CCA 72 bp | TGGGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCATTaGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: WGLSPQTPALPH*PRRMPPQSSAA Trigger: TGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
||
| 3UTR GCA 72 bp | CTTCTTCCTCATCACTCTCTATCCGGTAGGGCTTCTTaGTGCTCTCCTGCTCTGAGGGCAGGGCACTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLPHHSLSGRAS*CSPALRAGHWA Trigger: AGCCCAGTGCCCTGCCCTCAGAGCAGGAGAGCAGCAAGAAGCCCTACCGGATAGAGAGTGATGAGGAAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | TCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTaGAGAAGTCAGTGTCGCTGTCCTCATTGGATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLAEKDAASVFG*RSQCRCPHWMV Trigger: CACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCATTGGCCGAGAAGGATGCCGCCCCTTCACTTTCGTCATaGCTGGAGTATTTCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSFSANACFASLAEKDAAPSLSS*LEYFHL Trigger: CAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGG...GGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGCCTCAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATTGGATGGTGGAAGGCTGCAGAGGATTaGTCACTCTCGGATCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPQSSAAEVSVAVLIGWWKAAED*SLSDPS Trigger: TGAAGGATCCGAGAGTGACAAATCCTCTGCAGCCTT...CCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | TTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTGCTTTaGCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FFFGVFLRKRLL*LIGREGCRLSL Trigger: AAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | AGTACTTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTaGTTTGCCTCATTGGCCGAGAAGGATGCCGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: STSSLGSFSANA*FASLAEKDAAS Trigger: TGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CCA 72 bp | AGTTCTCAATGGCCTTGCCAGGGCTCTGTCCATTGGTaGAAGGCAAGTCTACTAGGCTGTAGTCCAATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSQWPCQGSVHW*KASLLGCSPMG Trigger: GCCCATTGGACTACAGCCTAGTAGACTTGCCTTCCACCAATGGACAGAGCCCTGGCAAGGCCATTGAGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGGGCTCTGTCCATTGGTGGAAGGCAAGTCTACTAGGCTGTAGTCCAATGGGAAGGCCACACTTTTaGCAAGGTTCATCGTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: CQGSVHWWKASLLGCSPMGRPHF*QGSSSS Trigger: AGATGACGATGAACCTTGCAAAAAGTGTGGCCTTCC...CATTGGACTACAGCCTAGTAGACTTGCCTTCCACCAATGGACAGAGCCCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR TCA 72 bp | CGAATATCAGGGCAAAAGCACACACTGAAGCAATGCTaGAGGCTTCAGATGTGCCAGGCAAGGCGAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: RISGQKHTLKQC*RLQMCQARRVT Trigger: TGTGACTCGCCTTGCCTGGCACATCTGAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCCCTGATATTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR GCA 72 bp | ATCCTTCACTTTCGTCATTGCTGGAGTATTTCCACCTaGCTCGTGTCCGAGAGCCAGTCCATCGAACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ILHFRHCWSIST*LVSESQSIELC Trigger: GCAAAGTTCGATGGACTGGCTCTCGGACACGAGGCAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | AGGATTTGTCACTCTCGGATCCTTCACTTTCGTCATTaGTGGAGTATTTCCACCTGCCTCGTGTCCGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RICHSRILHFRH*WSISTCLVSES Trigger: GCTCTCGGACACGAGGCAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGGATCCGAGAGTGACAAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | CATTGTCCTTGGGGGTTTGGGACTTTTCAGTTGCTTTaGCCATCAAGTTCTCAATGGCCTTGCCAGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HCPWGFGTFQLL*PSSSQWPCQGS Trigger: AGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAGCAACTGAAAAGTCCCAAACCCCCAAGGACAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CCA 72 bp | ATGGTGAGTGTGCCAGAACGGTCTCCTAGAGCAAAGTaGTATAAATGTGAGATAGGGCAGGGAGCTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: MVSVPERSPRAK*YKCEIGQGAVC Trigger: GCACACAGCTCCCTGCCCTATCTCACATTTATACCACTTTGCTCTAGGAGACCGTTCTGGCACACTCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CCA 72 bp | ATTTGTCACTCTCGGATCCTTCACTTTCGTCATTGCTaGAGTATTTCCACCTGCCTCGTGTCCGAGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ICHSRILHFRHC*SISTCLVSESQ Trigger: CTGGCTCTCGGACACGAGGCAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGGATCCGAGAGTGACAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CCA 72 bp | TTCCTCCTCCTCATCGTCATCGGAGTACTTCTTCTTTaGGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FLLLIVIGVLLL*GLSPQTPALPH Trigger: ATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAGTACTCCGATGACGATGAGGAGGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCACCACTTGTCCCATTGGGGGCTAGACTTGCACTGGCTGTGCCATTGTCCATCGCTTCGATTCTTTaGTTAGCTCATCATCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CPPLVPLGARLALAVPLSIASIL*LAHHLQ Trigger: CTGAAGATGATGAGCTAACAAAAGAATCGAAGCGAT...GGACAATGGCACAGCCAGTGCAAGTCTAGCCCCCAATGGGACAAGTGGTGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | AATTCCTTGAGCCAGCAGCAGATACAGCATGTCTATTaGCGGCAACAGACAACACTGGGACAGAAAACCCGA | + |
|
Preference number: 3 (lower is better) Translates to: NSLSQQQIQHVY*RQQTTLGQKTR Trigger: TCGGGTTTTCTGTCCCAGTGTTGTCTGTTGCCGGCAATAGACATGCTGTATCTGCTGCTGGCTCAAGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR GCA 72 bp | AACATCAGTAACAGCCTAGACAACACCACAAAGTCATaGACGGGAAGAGTAATGCTGCTGGTTGCCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: NISNSLDNTTKS*TGRVMLLVARV Trigger: GACCCTGGCAACCAGCAGCATTACTCTTCCCGTGCATGACTTTGTGGTGTTGTCTAGGCTGTTACTGATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR GCA 72 bp | TTTCAGTTGCTTTGCCCATCAAGTTCTCAATGGCCTTaGCAGGGCTCTGTCCATTGGTGGAAGGCAAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FQLLCPSSSQWP*QGSVHWWKASL Trigger: TAGACTTGCCTTCCACCAATGGACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAGCAACTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CCA 72 bp | GACCAAGTGGAAGAAGTGAAGGAAACCACCTCAGTGTaGCATGTGTGTTGTTGCAAACACACGACTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DQVEEVKETTSV*HVCCCKHTTLQ Trigger: CTGCAGAGTCGTGTGTTTGCAACAACACACATGCCACACTGAGGTGGTTTCCTTCACTTCTTCCACTTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCAGTGGCATGTGTGTTGTaGCAAACACACGACTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPTRLNGILVTKGTPLIPVACVL*QTHDSA Trigger: TGCAGAGTCGTGTGTTTGCAACAACACACATGCCAC...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR TCA 72 bp | TCTCTGAGCTGGAAAGTCTGCGCTTGTGAACTCGCCTaGTTTCTTTACCACGTCGTAGACTTTTCTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLSWKVCACELA*FLYHVVDFSGN Trigger: GTTCCCAGAAAAGTCTACGACGTGGTAAAGAAATCAGGCGAGTTCACAAGCGCAGACTTTCCAGCTCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR TCA 72 bp | CTCTCTTCACTCTCTGAGCTGGAAAGTCTGCGCTTGTaGACTCGCCTGATTTCTTTACCACGTCGTAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSSLSELESLRL*TRLISLPRRRL Trigger: AAGTCTACGACGTGGTAAAGAAATCAGGCGAGTTCACAAGCGCAGACTTTCCAGCTCAGAGAGTGAAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR GCA 72 bp | AAGTGGTATAAATGTGAGATAGGGCAGGGAGCTGTGTaGATGACCAGGAGTGGGGAATTAGACCTCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KWYKCEIGQGAV*MTRSGELDLCS Trigger: AGAACAGAGGTCTAATTCCCCACTCCTGGTCATGCACACAGCTCCCTGCCCTATCTCACATTTATACCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CCA 72 bp | GTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATTaGATGGTGGCTCTTCTTCACTTTCATCTGGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: VFGCRSQCRCPH*MVALLHFHLDF Trigger: AAAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
||
| 3UTR-3UTR CAA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCAAGAATTGATAGGTGGTaGCAAGAGCTGGTGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPTRLNGILVTKGTPLIPRIDRW*QELVCA Trigger: TGCACACACCAGCTCTTGCAACCACCTATCAATTCT...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGAACCCTAAATTCTGTTTaGGGCCCTCACAGATTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KHLPSMHEALDSISSMNRTLNSV*GPHRFG Trigger: TCCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGT...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGAAAAACCGCCTATTCTaGAAGCAAAGGGCTTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: STGAFSHPKFCFGPSQIWKNRLF*KQRAYP Trigger: AGGATAAGCCCTTTGCTTCAAGAATAGGCGGTTTTT...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTCAGCAGCTAGCTTGCTaGCCACTTCCAGGGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VLELLLQLSSKNSSWRTIQQLAC*PLPGFL Trigger: GAGAAACCCTGGAAGTGGCAAGCAAGCTAGCTGCTG...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR TCA 72 bp | ACAGTGGCTTTACCTGATTGCAGGACTGAAGCCTTCTaGGAGTGTAGGAAGAACCACTTACCACACAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TVALPDCRTEAF*ECRKNHLPHSS Trigger: ACTACTGTGTGGTAAGTGGTTCTTCCTACACTCTCAGAAGGCTTCAGTCCTGCAATCAGGTAAAGCCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR TCA 72 bp | TCTTCATCCAAAATAGTAGAAATGTCTTTCCCACGGTaGCCTGTGATGGTGGAGATATCTTTCCCCCGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSSKIVEMSFPR*PVMVEISFPRP Trigger: TGGCCGGGGGAAAGATATCTCCACCATCACAGGTCACCGTGGGAAAGACATTTCTACTATTTTGGATGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
||
| 3UTR TCA 72 bp | TCACATTATGGTCTTGATCCAACTGGTACCAATACATaGGGCCATCTTTGTCTCGCCCAATTGGCTGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SHYGLDPTGTNT*GHLCLAQLAGD Trigger: GTCTCCAGCCAATTGGGCGAGACAAAGATGGCCTCATGTATTGGTACCAGTTGGATCAAGACCATAATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR GCA 72 bp | CTTCTGGTAGAAGAACTAGTGAGGGCTAACACCTCATaGCTACCAACGAGGCTAAACGGTATTCTTGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LLVEELVRANTS*LPTRLNGILVT Trigger: TGTGACAAGAATACCGTTTAGCCTCGTTGGTAGGCATGAGGTGTTAGCCCTCACTAGTTCTTCTACCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR GCA 72 bp | GAATTAGTTCTGGATGGTTCGGAAGGCCACACTTTTTaGAAGGTTCATCGTCATCTGGAAGGACCGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ELVLDGSEGHTF*KVHRHLEGPLL Trigger: AAGAAGCGGTCCTTCCAGATGACGATGAACCTTGCAAAAAGTGTGGCCTTCCGAACCATCCAGAACTAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CCA 72 bp | AGATACAGCATGTCTATTGCCGGCAACAGACAACACTaGGACAGAAAACCCGAATATCAGGGCAAAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RYSMSIAGNRQH*DRKPEYQGKST Trigger: TGTGCTTTTGCCCTGATATTCGGGTTTTCTGTCCCAGTGTTGTCTGTTGCCGGCAATAGACATGCTGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CCA 72 bp | GCTGTTCATAAACATAACATGCAGGCCCCCGGCCTATaGCCAGGATGCAATAAATACAGATCAAACAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: AVHKHNMQAPGL*PGCNKYRSNKP Trigger: GGGTTTGTTTGATCTGTATTTATTGCATCCTGGCCATAGGCCGGGGGCCTGCATGTTATGTTTATGAACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | CAACATACACCAAACGTTCTTTCCTTCGCTCTGCACGCTCTTTCTTCTTTAAGGTGGGCCCTCACAGATTaGGAATGCATTCATATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QHTPNVLSFALHALSSLRWALTD*ECIHIH Trigger: GTGGATATGAATGCATTCCAAATCTGTGAGGGCCCA...CCTTAAAGAAGAAAGAGCGTGCAGAGCGAAGGAAAGAACGTTTGGTGTATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAACTGGTACCAATACATGAGGCCATCTTTGTCTCGCCCAATTGGCTGGAGTCTGTAAATGGAGGTTaGGGGCAAATAAAAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: IQLVPIHEAIFVSPNWLESVNGG*GQIKDK Trigger: CTTGTCTTTTATTTGCCCCAAACCTCCATTTACAGA...CTCCAGCCAATTGGGCGAGACAAAGATGGCCTCATGTATTGGTACCAGTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTCTTCTCCATCTCCCATGCCCAGGTACTGTTAAACTCTTGACAGATATGACCAGCAGGGTGATTTaGTTGAGTCAATCACCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AFLLHLPCPGTVKLLTDMTSRVI*LSQSPV Trigger: AACAGGTGATTGACTCAACAAAATCACCCTGCTGGT...CATATCTGTCAAGAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAGAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR CCA 72 bp | GTTACACTCTACAACAAGCACTGTATCGGCACAGCGTaGACAAACCCATCAGTGTCACTTTCATACACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VTLYNKHCIGTA*TNPSVSLSYTV Trigger: AACAGTGTATGAAAGTGACACTGATGGGTTTGTCCACGCTGTGCCGATACAGTGCTTGTTGTAGAGTGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CCA 72 bp | CAATACATGAGGCCATCTTTGTCTCGCCCAATTGGCTaGAGACGCATAGTATCAGCATCCTCCTCATTAATT | + |
|
Preference number: 3 (lower is better) Translates to: QYMRPSLSRPIG*RRIVSASSSLI Trigger: AATTAATGAGGAGGATGCTGATACTATGCGTCTCCAGCCAATTGGGCGAGACAAAGATGGCCTCATGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATTGGGCCCTCACAGATTaGGAATGCATTCATATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNWALTD*ECIHIH Trigger: GTGGATATGAATGCATTCCAAATCTGTGAGGGCCCA...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATAGTGTGGCATGTGTGTaGTTGCAAACACACGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNSVACV*LQTHDS Trigger: AGAGTCGTGTGTTTGCAACAACACACATGCCACACT...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTGTCGCTGTCCTCATTGGATGGTGGCTCTTCTTCACTTTCATCTGGATTCATCGAACTTTGCCTTaGGGTTTTACTTATGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VSVAVLIGWWLFFTFIWIHRTLP*GFTYVQ Trigger: TTGGACATAAGTAAAACCCAAAGGCAAAGTTCGATG...AATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGCATTGGGGGCTAGACTaGCACTGGCTGTGCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: AIINLQSSKLVTSQKDFKHWGLD*HWLCHC Trigger: ACAATGGCACAGCCAGTGCAAGTCTAGCCCCCAATG...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR TCA 72 bp | CAAAATGGCATCCCAGATGGTGAACACCATGTGGCCTaGAGAGTTAACACTACTGTCAAGTTTATAGTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QNGIPDGEHHVA*RVNTTVKFIVY Trigger: GTACACTATAAACTTGACAGTAGTGTTAACTCTTCAGGCCACATGGTGTTCACCATCTGGGATGCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR TCA 72 bp | CTTAATGCAACTTTTTATCCTCTCACTCTGTACCCTTaGCCAAGTGGAAGAAGTGAAGGAAACCACCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LNATFYPLTLYP*PSGRSEGNHLS Trigger: ACTGAGGTGGTTTCCTTCACTTCTTCCACTTGGTCAAGGGTACAGAGTGAGAGGATAAAAAGTTGCATTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR GCA 72 bp | GATTTTGTTGAGTCAATCACCTGTTCGACTTGGATTTaGAGGTTCTTCTTCTGTAAATGGAGGTTTGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DFVESITCSTWI*RFFFCKWRFGA Trigger: TGCCCCAAACCTCCATTTACAGAAGAAGAACCTGCAAATCCAAGTCGAACAGGTGATTGACTCAACAAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR TCA 72 bp | GTGTGTATGCACACATTTCCTCGTAAGAAATATCGTTaGGCATCTGTTCTAAAGCTCAGATACCACCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VCMHTFPRKKYR*ASVLKLRYHPE Trigger: TTCAGGGTGGTATCTGAGCTTTAGAACAGATGCTCAACGATATTTCTTACGAGGAAATGTGTGCATACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR GCA 72 bp | GCACGCTCTTTCTTCTTTAAGGCGACGTCCAAATCTTaGAGCTGTTCTTCTAACTTTTCACACAGTAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ARSFFFKATSKS*SCSSNFSHSSL Trigger: TAAACTACTGTGTGAAAAGTTAGAAGAACAGCTGCAAGATTTGGACGTCGCCTTAAAGAAGAAAGAGCGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CCA 72 bp | CAGGGTGATTTTGTTGAGTCAATCACCTGTTCGACTTaGATTTGCAGGTTCTTCTTCTGTAAATGGAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QGDFVESITCST*ICRFFFCKWRF Trigger: AAACCTCCATTTACAGAAGAAGAACCTGCAAATCCAAGTCGAACAGGTGATTGACTCAACAAAATCACCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR GCA 72 bp | AATTCAGCATCCTTGTGGTTACCCAGAATGTGTGTATaGACACATTTCCTCGTAAGAAATATCGTTGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NSASLWLPRMCV*THFLVRNIVEH Trigger: ATGCTCAACGATATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGCTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR GCA 72 bp | ACTCATTTCAAGATAGCCTTTCTTCTCCATCTCCCATaGCCAGGTACTGTTAAACTCTTGACAGATATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: THFKIAFLLHLP*PGTVKLLTDMK Trigger: TTTCATATCTGTCAAGAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAGAAAGGCTATCTTGAAATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| 3UTR CCA 72 bp | TTAGTAACTCAGTTCATGATGAATTCAGCATCCTTGTaGTTACCCAGAATGTGTGTATGCACACATTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVTQFMMNSASL*LPRMCVCTHFL Trigger: GAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGCTGAATTCATCATGAACTGAGTTACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR TCA 72 bp | GGAACTGTAAAAATCTGGCTACCTCTCACACCTTACTaGAATCGCAAACTAAACACTTGGAATATTACACTG | + |
|
Preference number: 3 (lower is better) Translates to: GTVKIWLPLTPY*NRKLNTWNITL Trigger: CAGTGTAATATTCCAAGTGTTTAGTTTGCGATTTCAGTAAGGTGTGAGAGGTAGCCAGATTTTTACAGTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CCA 72 bp | TCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAACCTTaGCACTCAAAAGAAAAAGTTACCTCATTTAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSVLCSQLSSKP*HSKEKVTSFKL Trigger: CAACTTAAATGAGGTAACTTTTTCTTTTGAGTGCCAAGGTTTGCTAGATAACTGGCTACACAACACTGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACCAGTCCATCGAACTTaGCCTTTGGGTTTTACTTAT | + |
|
Preference number: 3 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSPVHRT*PLGFTY Trigger: ATAAGTAAAACCCAAAGGCAAAGTTCGATGGACTGG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR TCA 72 bp | ACAAAGGGAACTCCACTCATCCCACATTACAATTACTaGCACATTCTCCATAATTATAACTCCCTATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKGTPLIPHYNY*HILHNYNSLFK Trigger: TTTAAATAGGGAGTTATAATTATGGAGAATGTGTCAGTAATTGTAATGTGGGATGAGTGGAGTTCCCTTTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | TTGGGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCATaGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFSANACFAS*AEKDAASVFGC Trigger: GCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CAA 72 bp | CCTCCTGTCCACCACTTGTCCCATTGGGGGCTAGACTaGCACTGGCTGTGCCATTGTCCTTGGGGGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPVHHLSHWGLD*HWLCHCPWGFG Trigger: CCCAAACCCCCAAGGACAATGGCACAGCCAGTGCAAGTCTAGCCCCCAATGGGACAAGTGGTGGACAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| CDS-3UTR GCA 90 bp | ATACATGAGGCCATCTTTGTCTCGCCCAATTGGCTGGAGACGCATAGTATCAGCTCTGGCGGCGGCGCCTaGAGCACCCGCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHEAIFVSPNWLETHSISSGGGA*STRSSS Trigger: AGAGCTGGAGCGGGTGCTGCAGGCGCCGCCGCCAGA...GCTGATACTATGCGTCTCCAGCCAATTGGGCGAGACAAAGATGGCCTCATGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCAGAAGTCAAGGCTCCTCCCAGAGTaGCTCACAACCAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLIGREGCRLSLRLQKSRLLPE*LTTSSR Trigger: CCTGGAGCTGGTTGTGAGCCACTCTGGGAGGAGCCT...TGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135270.3 |
||
| 3UTR CAA 72 bp | CTTCTTCTTTGGGGTCTTTCTCCGCAAACGCCTGCTTaGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLWGLSPQTPA*PHWPRRMPPQS Trigger: AGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAAAGCACACACTGAAGCAATGCTGAAGGCTTCAGATGTGCCAGGCAAGTTCATCTTCCTCTGGTaGCCCCACCTCCTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RAKAHTEAMLKASDVPGKFIFLW*PHLLST Trigger: GGTGGACAGGAGGTGGGGGCACCAGAGGAAGATGAA...CTTGCCTGGCACATCTGAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAGAAGTGAAGGAAACCACCTCAGTGTGGCATGTGTGTTGTTGCAAACAGCCGGCGTTTCTTCCTaGGAGCAGCAGCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRSEGNHLSVACVLLQTAGVSS*EQQLPS Trigger: AGAGGGCAGCTGCTGCTCGCAGGAAGAAACGCCGGC...TGTTTGCAACAACACACATGCCACACTGAGGTGGTTTCCTTCACTTCTTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCAATCACCTGTTCGACTTGGATTTGCAGGTTCTTCTTCTGTAAATGGAGGCACCCGCTCCAGCTCTaGGAACGGCAACTCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESITCSTWICRFFFCKWRHPLQL*ERQLGQ Trigger: CTGCCCGAGTTGCCGTTCCCAGAGCTGGAGCGGGTG...CCTCCATTTACAGAAGAAGAACCTGCAAATCCAAGTCGAACAGGTGATTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAAAGCACACACTGAAGCAATGCTGAAGGCTTCAGATGTGCCAGGCAAGATCTTCATCTTCCTCTaGTGCCCCCACCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAKAHTEAMLKASDVPGKIFIFL*CPHLLS Trigger: GGACAGGAGGTGGGGGCACCAGAGGAAGATGAAGAT...CTTGCCTGGCACATCTGAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | CTTCCTCCTCCTCATCGTCATCGGAGTACTTCTTCTTaGGGGTCTTTCTCCGCAAACGCCTGCTTTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPPHRHRSTSS*GSFSANACFAS Trigger: TGAGGCAAAGCAGGCGTTTGCGGAGAAAGACCCCAAAGAAGAAGTACTCCGATGACGATGAGGAGGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAATCACCTGTTCGACTTGGATTTGCAGGTTCTTCTTCTGTAAATGGAGGAGACTACGGCGAAGTTaGGGCACGAACCCGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESITCSTWICRFFFCKWRRLRRS*GTNPGS Trigger: GCTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCT...CCTCCATTTACAGAAGAAGAACCTGCAAATCCAAGTCGAACAGGTGATTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR CCA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAATCCGTTGCCGATGTCTaGCGGCGGCGCCTGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKSVADV*RRRLQH Trigger: GTGCTGCAGGCGCCGCCGCCAGACATCGGCAACGGA...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CTTTGCCTCATTGGCCGAGAAGGATGCCGCCTCAGTCTTCGGCTGCAGAAGTCACACAGTAGTTTATGTTaGCAAGGAGGGCAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLIGREGCRLSLRLQKSHSSLC*QGGQNH Trigger: ATGGTTCTGCCCTCCTTGCCAACATAAACTACTGTG...TGACTTCTGCAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAATGAGGCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135270.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTCTGAGGGCAGGGCACTaGGCTGGCTGTCACGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLELLLQLSSKNSSWRTILRAGH*AGCHGQ Trigger: CTGCCCGTGACAGCCAGCCCAGTGCCCTGCCCTCAG...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGTCCCACGGTGACCTGTaGTGGTGGAGATATCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STGAFSHPKFCFGPSQIWSHGDL*WWRYLS Trigger: GGAAAGATATCTCCACCATCACAGGTCACCGTGGGA...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCATGCTGTTTGCAAAGATaGCGGCTCCCCTTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTRLNGILVTKGTPLIPCCLQR*RLPFHS Trigger: GGAGTGGAAGGGGAGCCGGCATCTTTGCAAACAGCA...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCATGGAGTATTTCCACCTaGCTCGTGTCCGAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTRLNGILVTKGTPLIPWSIST*LVSESQ Trigger: CTGGCTCTCGGACACGAGGCAGGTGGAAATACTCCA...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGAGACTACGGCGAAGTTaGGGCACGAACCCGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFETQVSGAFAKWNTQSLRLRRS*GTNPGS Trigger: GCTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCT...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGGTTCTTCTAGAGCGCTaGCTGCAGAACACTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STGAFSHPKFCFGPSQIWVLLER*LQNTSQ Trigger: CTGGGAAGTGTTCTGCAGCCAGCGCTCTAGAAGAAC...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | GAGGATTTGTCACTCTCGGATCCTTCACTTTCGTCATaGCTGGAGTATTTCCACCTGCCTCGTGTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EDLSLSDPSLSS*LEYFHLPRVRE Trigger: CTCTCGGACACGAGGCAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGGATCCGAGAGTGACAAATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| CDS-3UTR GCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGTCTGGCGGCGGCGCCTaGAGCACCCGCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKSGGGA*STRSSS Trigger: AGAGCTGGAGCGGGTGCTGCAGGCGCCGCCGCCAGA...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATACGGGCAGGCTGGTCTaGGTCCCCATGAGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNTGRLV*VPMSIV Trigger: GACAATGCTCATGGGGACGCAGACCAGCCTGCCCGT...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCAGGCATTCTATGCCTaGGGTGTGGTTCTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STGAFSHPKFCFGPSQIWQAFYA*GVVLTL Trigger: AAGAGTGAGAACCACACCCCAGGCATAGAATGCCTG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | AAATTCCTTGAGCCAGCAGCAGATACAGCATGTCTATaGCCGGCAACAGACAACACTGGGACAGAAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: KFLEPAADTACL*PATDNTGTENP Trigger: CGGGTTTTCTGTCCCAGTGTTGTCTGTTGCCGGCAATAGACATGCTGTATCTGCTGCTGGCTCAAGGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | TTTTCAGTTGCTTTGCCCATCAAGTTCTCAATGGCCTaGCCAGGGCTCTGTCCATTGGTGGAAGGCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVALPIKFSMA*PGLCPLVEGKS Trigger: AGACTTGCCTTCCACCAATGGACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGGGCAAAGCAACTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| CDS-3UTR TCA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCACTCTTCCTTGCTTTCTaGGTCTACAGTTTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTRLNGILVTKGTPLIPLFLAF*VYSLWG Trigger: CCCCCACAAACTGTAGACTCAGAAAGCAAGGAAGAG...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGAATGTCTTTCCCACGGTaGCCTGTGATGGTGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KHLPSMHEALDSISSMNRMSFPR*PVMVEI Trigger: TATCTCCACCATCACAGGTCACCGTGGGAAAGACAT...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAGCTGCTCTCCTGCTCTaGGGGCAGGGCACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSAALLL*GQGTGL Trigger: CAGCCCAGTGCCCTGCCCTCAGAGCAGGAGAGCAGC...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCACAGAAGTATCCTCCATaGCAGAGGTCTGGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTRLNGILVTKGTPLIPQKYPP*QRSGHC Trigger: ACAATGCCCAGACCTCTGGCATGGAGGATACTTCTG...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGATTCTTGTCTGCTGTTTaGAAAGATGCCGGCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KHLPSMHEALDSISSMNRFLSAV*KDAGSP Trigger: AGGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAA...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAAAGCACACACTGAAGCAATGCTGAAGGCTTCAGATGTGCCAGGCAAGCAGTCCATCGAACTTTaGCTTTGGGTTTTACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAKAHTEAMLKASDVPGKQSIEL*LWVLPC Trigger: GCAAGGTAAAACCCAAAGGCAAAGTTCGATGGACTG...CTTGCCTGGCACATCTGAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAATTCTTGCTGCTCTCCTaGTCTGAGGGCAGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKFLLLS*SEGRAL Trigger: CAGTGCCCTGCCCTCAGAGCAGGAGAGCAGCAAGAA...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAATCCGGTAGGGCTTCTTaGTGCTCTCCTGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKSGRAS*CSPALR Trigger: CCTCAGAGCAGGAGAGCAGCAAGAAGCCCTACCGGA...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAAGGGCATTGTCCAGTTTaGCCACTTCCTCCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKGHCPV*PLPPSR Trigger: CCTCGAGGGAGGAAGTGGCCAAACTGGACAATGCCC...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCTTCACTCTCTGAGCTaGAAAGTCTGCGCTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STGAFSHPKFCFGPSQIWLHSLS*KVCACE Trigger: TTCACAAGCGCAGACTTTCCAGCTCAGAGAGTGAAG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | AGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATaGGATGGTGGCTCTTCTTCACTTTCATCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLQKSVSLSS*DGGSSSLSSGF Trigger: AAATCCAGATGAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123731.8 ENSMUST00000135270.3 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGATCCTCATCTGCTTCTaGATAGTCATCTGTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STGAFSHPKFCFGPSQIWILICF*IVICAS Trigger: CGAAGCACAGATGACTATTCAGAAGCAGATGAGGAT...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATCGCAAACGCCTGCTTTaGCTCATTGGCCGAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVRVCREVIHAMDESFGNRKRLL*LIGREG Trigger: TCCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCG...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATTTCTCCGCAAACGCCTaGTTTGCCTCATTGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CVRVCREVIHAMDESFGNFSANA*FASLAE Trigger: CTCGGCCAATGAGGCAAAGCAGGCGTTTGCGGAGAA...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACACCCGCTCCAGCTCTaGGAACGGCAACTCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSHPLQL*ERQLGQ Trigger: CTGCCCGAGTTGCCGTTCCCAGAGCTGGAGCGGGTG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGCCTCATCCTCTAGGGTaGGGCTTTCCCGAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQPHPLG*GFPEKN Trigger: ATTCTTCTCGGGAAAGCCCCACCCTAGAGGATGAGG...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGTCTCACTCTTACTTCTaGGGGCCTTCTCTTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: STGAFSHPKFCFGPSQIWSHSYF*GPSLQL Trigger: AAGTTGAAGAGAAGGCCCCCAGAAGTAAGAGTGAGA...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGTCCATGCCAGAGGTCTaGGCATTGTCCAGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFETQVSGAFAKWNTQSLSMPEV*ALSSLA Trigger: GGCCAAACTGGACAATGCCCAGACCTCTGGCATGGA...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAACACCACTTGTCCCATTaGGGGCTAGACTTGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKHHLSH*GLDLHW Trigger: CCAGTGCAAGTCTAGCCCCCAATGGGACAAGTGGTG...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTGCTCCAAGCTGCCTTTaGGATCTTTTGGGTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLELLLQLSSKNSSWRTIAPSCL*DLLGPL Trigger: GAGCGGACCCAAAAGATCTCAAAGGCAGCTTGGAGC...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGACACTTTCAGAGTCTCTaGTGTTCTCCTCGGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KHLPSMHEALDSISSMNRHFQSL*CSPRIL Trigger: AAGAATCCGAGGAGAACAGCAGAGACTCTGAAAGTG...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGGACTTGCACTGGCTGTaGCATTGTCCTTGGGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFETQVSGAFAKWNTQSLDLHWL*HCPWGF Trigger: AAACCCCCAAGGACAATGGCACAGCCAGTGCAAGTC...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAGAAGTGAAGGAAACCACCTCAGTGTGGCATGTGTGTTGTTGCAAACAGCTGTCCTCATTGGATaGTGGCTCTTCTTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGRSEGNHLSVACVLLQTAVLIG*WLFFTF Trigger: GAAAGTGAAGAAGAGCCACCATCCAATGAGGACAGC...TGTTTGCAACAACACACATGCCACACTGAGGTGGTTTCCTTCACTTCTTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | AGAAGTGAAGGAAACCACCTCAGTGTGGCATGTGTGTaGTTGCAAACACACGACTCTGCAGTTACACTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSEGNHLSVACV*LQTHDSAVTLY Trigger: GTAGAGTGTAACTGCAGAGTCGTGTGTTTGCAACAACACACATGCCACACTGAGGTGGTTTCCTTCACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | AGAATTAGTTCTGGATGGTTCGGAAGGCCACACTTTTaGCAAGGTTCATCGTCATCTGGAAGGACCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RISSGWFGRPHF*QGSSSSGRTAS Trigger: AGAAGCGGTCCTTCCAGATGACGATGAACCTTGCAAAAAGTGTGGCCTTCCGAACCATCCAGAACTAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| 3UTR CAA 72 bp | CAAATCTTGCCTCTCCCTACCAGCAGGGTGATTTTGTaGAGTCAATCACCTGTTCGACTTGGATTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QILPLPTSRVIL*SQSPVRLGFAG Trigger: ACCTGCAAATCCAAGTCGAACAGGTGATTGACTCAACAAAATCACCCTGCTGGTAGGGAGAGGCAAGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGACTGGTACCAATACATaGGGCCATCTTTGTCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFETQVSGAFAKWNTQSLTGTNT*GHLCLA Trigger: GGCGAGACAAAGATGGCCTCATGTATTGGTACCAGT...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGAGTTCGACCCACACTTaGTTTCTCTTCTTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQSSTHT*FLFFLA Trigger: GGCAAGGAAGAAGAGAAAGCAAGTGTGGGTCGAACT...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACCTGCGAGCAGCAGCTaGCCTCTGGGGCCGTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSPASSS*PLGPFI Trigger: AATAAACGGCCCCAGAGGGCAGCTGCTGCTCGCAGG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCAAAGGTCCTTTGACTaGACTGTCAAAATCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: STGAFSHPKFCFGPSQIWQRSFD*TVKIIT Trigger: AGTGATGATTTTGACAGTCCAGTCAAAGGACCTTTG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGTGTCGCTGTCCTCATTaGATGGTGGCTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFETQVSGAFAKWNTQSLCRCPH*MVALLH Trigger: GTGAAGAAGAGCCACCATCCAATGAGGACAGCGACA...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAAGGCTCTGTCCATTGGTaGAAGGCAAGTCTACTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKGSVHW*KASLLG Trigger: GCCTAGTAGACTTGCCTTCCACCAATGGACAGAGCC...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTCCATCAAGTTCTCAATaGCCTTGCCAGGGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLELLLQLSSKNSSWRTIPSSSQ*PCQGSV Trigger: GACAGAGCCCTGGCAAGGCCATTGAGAACTTGATGG...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAGAAGTGAAGGAAACCACCTCAGTGTGGCATGTGTGTTGTTGCAAACACTCACATTATGGTCTTaGTCCAACTGGTACCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SGRSEGNHLSVACVLLQTLTLWS*SNWYQY Trigger: GTATTGGTACCAGTTGGATCAAGACCATAATGTGAG...TGTTTGCAACAACACACATGCCACACTGAGGTGGTTTCCTTCACTTCTTCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAGAAGTGAAGGAAACCACCTCAGTGTGGCATGTGTGTTGTTGCAAACATCTGCTTTCTTCAAGTaGTCCTTCTTGTCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRSEGNHLSVACVLLQTSAFFK*SFLSAV Trigger: AACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGA...TGTTTGCAACAACACACATGCCACACTGAGGTGGTTTCCTTCACTTCTTCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGATTTTTCCCATCTGTCTaGTGTAACGGATTTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KHLPSMHEALDSISSMNRFFPSV*CNGFAN Trigger: ATTGGCAAATCCGTTACAGCAGACAGATGGGAAAAA...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATCTTCTCCATCTCCCATaGCCAGGTACTGTTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNLLHLP*PGTVKL Trigger: GAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAG...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATGTGATCCTTCTTGTCTaGTGTTTGCAAAGATGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNVILLV*CLQRCR Trigger: CCGGCATCTTTGCAAACAGCAGACAAGAAGGATCAC...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAATTGGCCGAGAAGGATaGCGCCTCAGTCTTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSIGREG*RLSLRL Trigger: CAGCCGAAGACTGAGGCGGCATCCTTCTCGGCCAAT...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCATCCGGTGTAGCCGCTTaGGGGATGGTTTGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSSGVAA*GMVCLP Trigger: AGGAAGGCAAACCATCCCGCAAGCGGCTACACCGGA...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACCCAGCCATCGAGAGTaGGAGAGGAGTTTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSPSHRE*ERSFSH Trigger: GTGGCTGAAACTCCTCTCCCACTCTCGATGGCTGGG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAACTCTTATCGGCTTTCTaGACTCTGATCTCAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKLLSAF*TLISAT Trigger: AGTCGCTGAGATCAGAGTCCAGAAAGCCGATAAGAG...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | TTTCAAATCTTGCCTCTCCCTACCAGCAGGGTGATTTaGTTGAGTCAATCACCTGTTCGACTTGGATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQILPLPTSRVI*LSQSPVRLGFA Trigger: TGCAAATCCAAGTCGAACAGGTGATTGACTCAACAAAATCACCCTGCTGGTAGGGAGAGGCAAGATTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGTTTCTAGCTTTACAATaGCTGGCAGTTTCGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQFLALQ*LAVSQA Trigger: AGCTTGCGAAACTGCCAGTCATTGTAAAGCTAGAAA...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGCCTCAGTCTTCGGCTaGAGAAGTCAGTGTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKASVFG*RSQCRC Trigger: ACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGC...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATCTCCACCAATTCTTTTaGTACTTCTCCGTTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNLHQFF*YFSVAD Trigger: ATCGGCAACGGAGAAGTACCAAAAGAATTGGTGGAG...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATCTGTGGCAGACAAAGTaGGTTTTAAAGAGAGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNLWQTK*VLKRDP Trigger: CGGATCTCTCTTTAAAACCCACTTTGTCTGCCACAG...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGTCTGTTTCTCCTTaGCCCCAGCCATCGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSRSVSP*PQPSRV Trigger: CACTCTCGATGGCTGGGGCCAAGGAGAAACAGACCT...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TACACTGTTTCAATTCTAAGTTCTGGAACTGTAAAAATCTGGCTACCTCTCACAGCAGCAGCTGCCCTCTaGGGCCGTTTATTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YTVSILSSGTVKIWLPLTAAAAL*GRLFSF Trigger: AAAGGAAAATAAACGGCCCCAGAGGGCAGCTGCTGC...TGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | TATGACTGTTTACATGGGAATAGCTTGTCCTCAGTGTaGTGTAGCCAGTTATCTAGCAAACCTTGGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YDCLHGNSLSSV*CSQLSSKPWHS Trigger: TGAGTGCCAAGGTTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACAGTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGTACACAAAGGTCCTTTaGCTGGACTGTCAAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQYTKVL*LDCQNH Trigger: ATGATTTTGACAGTCCAGTCAAAGGACCTTTGTGTA...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATTCTTTGTGCTGGTTATaGCAGAATTTAAGCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNSLCWL*QNLSTP Trigger: CGGAGTGCTTAAATTCTGTCATAACCAGCACAAAGA...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATTCTTCCTTTCAGAGGTaGTCTCAGTGTTTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNSSFQR*SQCFLK Trigger: CTTCAGAAAACACTGAGATCACCTCTGAAAGGAAGA...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCAGGGTTTTACCTTGCTTaGTTTAGAATTTGTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPTRLNGILVTKGTPLIPGFYLA*FRICIL Trigger: AAGGATACAAATTCTAAAGCAAGCAAGGTAAAACCC...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGTTCACGTTTCTTCAGTaGTATCTTGGCTTGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VFETQVSGAFAKWNTQSLFTFLQ*YLGLLI Trigger: GATCAGCAAGCCAAGATACCACTGAAGAAACGTGAA...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATGGATGTCCTTATCAATaGAGGTCTTCTTGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNGCPYQ*RSSWLS Trigger: AGAAAGCCAAGAAGACCTCCATTGATAAGGACATCC...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGCGGAGGCAGGCAGTATaGTATCCACTGTCGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKRRQAV*YPLSQE Trigger: TTCTTGCGACAGTGGATACCATACTGCCTGCCTCCG...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATCGTCGTAGACTTTTCTaGGAACCATCACTTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVRVCREVIHAMDESFGNRRRLF*EPSLSE Trigger: TTCAGAAAGTGATGGTTCCCAGAAAAGTCTACGACG...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAATTGTCCTTGGGGGTTTaGGACTTTTCAGTTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKLSLGV*DFSVAL Trigger: CAAAGCAACTGAAAAGTCCCAAACCCCCAAGGACAA...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TACACTGTTTCAATTCTAAGTTCTGGAACTGTAAAAATCTGGCTACCTCTCACACTGTGCCATTGTCCTTaGGGGTTTGGGACTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTVSILSSGTVKIWLPLTLCHCP*GFGTFQ Trigger: CTGAAAAGTCCCAAACCCCCAAGGACAATGGCACAG...TGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | AACAAGGACTATGTAGATTACAGCATACATGTGGTCTaGGCATTCTCTGCTAAGAGAACCAGAAACGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKDYVDYSIHVV*AFSAKRTRNVL Trigger: CAAGACGTTTCTGGTTCTCTTAGCAGAGAATGCCAAGACCACATGTATGCTGTAATCTACATAGTCCTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | ACTAACAGCATGATCCTAATTACCTCAAGAGTTACTTaGATTGCTAGTCTTGGAGCTTCTGCTTCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TNSMILITSRVT*IASLGASASAL Trigger: GAGAGCTGAAGCAGAAGCTCCAAGACTAGCAATCAAAGTAACTCTTGAGGTAATTAGGATCATGCTGTTAGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | CTTGGATTTGCAGGTTCTTCTTCTGTAAATGGAGGTTaGGGGCAAATAAAAGACAAGGAATGTGCCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGFAGSSSVNGG*GQIKDKECANH Trigger: GTGATTGGCACATTCCTTGTCTTTTATTTGCCCCAAACCTCCATTTACAGAAGAAGAACCTGCAAATCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR TCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATTTTAGTTGGAGTAGCTaGCTTACACAAAGGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNFSWSS*LTQRSF Trigger: AAAGGACCTTTGTGTAAGTCAGCTACTCCAACTAAA...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAAATCTTGCCTCTCCCTACCAGCAGGGTGATTTTGTTGAGTCAATCACCTGTTCTCATTAACTTCAAATaGAGCTCCACCAATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QILPLPTSRVILLSQSPVLINFK*SSTNSF Trigger: AAAAGAATTGGTGGAGCTGCATTTGAAGTTAATGAG...AACAGGTGATTGACTCAACAAAATCACCCTGCTGGTAGGGAGAGGCAAGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAACGCTCTGCATTCCTTTaGTTCTACTTTAATGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKRSAFL*FYFNGF Trigger: AAACCCATTAAAGTAGAAGCAAAGGAATGCAGAGCG...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAAGATCTCAGCGACTTTTaGTGTGGGTCTAGATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKDLSDF*CGSRYS Trigger: AGAATATCTAGACCCACAGCAAAAGTCGCTGAGATC...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGCTTGCGGGATGGTTTaGCTTCCTCTTCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKACGMV*LPLHHP Trigger: AGGATGATGAAGAGGAAGGCAAACCATCCCGCAAGC...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAAACTTTTCAGTTGCTTTaGCCATCAAGTTCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKTFQLL*PSSSQW Trigger: CCATTGAGAACTTGATGGGCAAAGCAACTGAAAAGT...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAACATACACCAAACGTTCTTTCCTTCGCTCTGCACGCTCTTTCTTCTTTAAGGCAGCATTGCCTTGCTTaGTTTAGAATTTGTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHTPNVLSFALHALSSLRQHCLA*FRICIL Trigger: AAGGATACAAATTCTAAAGCAAGCAAGGCAATGCTG...CCTTAAAGAAGAAAGAGCGTGCAGAGCGAAGGAAAGAACGTTTGGTGTATGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCATCTCGCCCAATTGGCTaGAGACGCATAGTATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSSRPIG*RRIVSA Trigger: TGCTGATACTATGCGTCTCCAGCCAATTGGGCGAGA...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TACACTGTTTCAATTCTAAGTTCTGGAACTGTAAAAATCTGGCTACCTCTCACATTTGTCTCGCCCAATTaGCTGGAGACGCATAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: YTVSILSSGTVKIWLPLTFVSPN*LETHSI Trigger: GATACTATGCGTCTCCAGCCAATTGGGCGAGACAAA...TGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATGAAGAATCTTCCTGTTaGCTCGAGTTTTTCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNEESSC*LEFFNR Trigger: CCTATTGAAAAACTCGAGCCAACAGGAAGATTCTTC...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TACACTGTTTCAATTCTAAGTTCTGGAACTGTAAAAATCTGGCTACCTCTCACATCTATGCCTGGGGTGTaGTTCTCACTCTTACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTVSILSSGTVKIWLPLTSMPGV*FSLLLL Trigger: CAGAAGTAAGAGTGAGAACCACACCCCAGGCATAGA...TGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGAAACTCAGGCTCTTGTaGAGGAATGATGTTTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQKLRLL*RNDVFN Trigger: ATTGAAAACATCATTCCTCCACAAGAGCCTGAGTTT...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTCAAGAAGAGCCATCTTaGTCATCTTGTTCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: VLELLLQLSSKNSSWRTIQEEPS*SSCSSM Trigger: CATAGAAGAACAAGATGATCAAGATGGCTCTTCTTG...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAGCTTGTGAACTCGCCTaGTTTCTTTACCACGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSACELA*FLYHVV Trigger: TACGACGTGGTAAAGAAATCAGGCGAGTTCACAAGC...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCATTGTGCTTTCAGGAGTaGAAGAGTCTCAGCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSLCFQE*KSLSQL Trigger: GAGTTGGCTGAGACTCTTGCACTCCTGAAAGCACAA...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGCTTCTTCATCTAGGTTaGTATCACTGTCAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFETQVSGAFAKWNTQSLLLHLG*YHCQDH Trigger: ATGATCTTGACAGTGATAGCAACCTAGATGAAGAAG...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TACACTGTTTCAATTCTAAGTTCTGGAACTGTAAAAATCTGGCTACCTCTCACATACTGCAGGGTTCTGTaGCAGACAAAGTGGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YTVSILSSGTVKIWLPLTYCRVL*QTKWVL Trigger: TAAAACCCACTTTGTCTGCCACAGAACCCTGCAGTA...TGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAGACGCATAGTATCAGCATCCTCCTCATTAATTATATTCTTGAATTTAAGCTCCACCAATTCTTTTaGTACTTCTCCGTTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LETHSISILLINYILEFKLHQFF*YFSVAD Trigger: ATCGGCAACGGAGAAGTACCAAAAGAATTGGTGGAG...CTTAAATTCAAGAATATAATTAATGAGGAGGATGCTGATACTATGCGTCTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR CCA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATATTGGACTCAATTTTTaGATGTCCTTATCAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNIGLNF*MSLSME Trigger: CTCCATTGATAAGGACATCCAAAAATTGAGTCCAAT...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATAACTTCTTCTGGTATTaGACTCAATTTTTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVRVCREVIHAMDESFGNNFFWY*TQFLDV Trigger: GACATCCAAAAATTGAGTCCAATACCAGAAGAAGTT...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATCCTTACAACTTCTTCTaGTATTGGACTCAATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CVRVCREVIHAMDESFGNPYNFF*YWTQFL Trigger: CAAAAATTGAGTCCAATACCAGAAGAAGTTGTAAGG...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACACAGTAGTTTATGTTaGCAAGGAGGGCAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSHSSLC*QGGQNH Trigger: ATGGTTCTGCCCTCCTTGCCAACATAAACTACTGTG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGTCCTCATTGGATGGTaGCTCTTCTTCACTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKVLIGW*LFFTFI Trigger: GATGAAAGTGAAGAAGAGCCACCATCCAATGAGGAC...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| 3UTR CAA 72 bp | CATTTAGTAACTCAGTTCATGATGAATTCAGCATCCTaGTGGTTACCCAGAATGTGTGTATGCACACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLVTQFMMNSAS*WLPRMCVCTHF Trigger: GAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGCTGAATTCATCATGAACTGAGTTACTAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGAGTTGTTTCCCTTCATaGCTCAAAGCACTGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKSCFPS*LKALMV Trigger: TACCATCAGTGCTTTGAGTCATGAAGGGAAACAACT...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTCTCATTAACTTCAAATaGAGCTCCACCAATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLELLLQLSSKNSSWRTILINFK*SSTNSF Trigger: AAAAGAATTGGTGGAGCTGCATTTGAAGTTAATGAG...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR GCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGACAGGATCAATTTGTaGTTTCAGGAGTGCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKDRINL*FQECKS Trigger: ACTCTTGCACTCCTGAAAGCACAAATTGATCCTGTC...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGGTATCTTGGCTTGCTaGTCATTTTTAAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKGILAC*SFLSFS Trigger: AGAGAAGCTTAAAAATGATCAGCAAGCCAAGATACC...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGGATCTCAGTGTTTTCTaGAGCAGTACTGTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIINLQSSKLVTSQKDFKDLSVF*SSTVSF Trigger: GAAAGAAACAGTACTGCTTCAGAAAACACTGAGATC...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR TCA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGATTGTCATCAAACTaGCACTCACAGAGATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSRLSSN*HSQRYF Trigger: AAAGTATCTCTGTGAGTGTCAGTTTGATGACAATCT...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | GCAGCGGCCCGTAGCGTTCCAAGAAGGAGCAGACTACGGCGAAGTTaGGGCACGAACCCGGGCAGCCCGGAGGAGCCATCGCCGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAARSVPRRSRLRRS*GTNPGSPEEPSPLP Trigger: CGGCAGCGGCGATGGCTCCTCCGGGCTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCTGCTCCTTCTTGGAACGCTACGGGCCGCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107153.3 ENSMUST00000127891.3 |
||
| CDS CCA 90 bp | GGAGGTCTTCTTGGCTTTCTCCACCCTTTCCAGGCATTCTATGCCTaGGGTGTGGTTCTCACTCTTACTTCTGGGGGCCTTCTCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGLLGFLHPFQAFYA*GVVLTLTSGGLLFN Trigger: GTTGAAGAGAAGGCCCCCAGAAGTAAGAGTGAGAACCACACCCCAGGCATAGAATGCCTGGAAAGGGTGGAGAAAGCCAAGAAGACCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | TGCACAGAGCCCTTTGTTTCAGAAGTATCCTCCATGCCAGAGGTCTaGGCATTGTCCAGTTTGGCCACTTCCTCCCTCGAGGACTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTEPFVSEVSSMPEV*ALSSLATSSLEDSE Trigger: TTCTGAGTCCTCGAGGGAGGAAGTGGCCAAACTGGACAATGCCCAGACCTCTGGCATGGAGGATACTTCTGAAACAAAGGGCTCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGGAGGTCTGTTTCTCCTaGGCCCCAGCCATCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STGAFSHPKFCFGPSQIWEVCFS*APAIES Trigger: ACTCTCGATGGCTGGGGCCAAGGAGAAACAGACCTC...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS GCA 90 bp | CAATGGAGGTCTTCTTGGCTTTCTCCACCCTTTCCAGGCATTCTATaGCTGGGGTGTGGTTCTCACTCTTACTTCTGGGGGCCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QWRSSWLSPPFPGIL*LGCGSHSYFWGPSL Trigger: AAGAGAAGGCCCCCAGAAGTAAGAGTGAGAACCACACCCCAGGCATAGAATGCCTGGAAAGGGTGGAGAAAGCCAAGAAGACCTCCATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTTGAGTCAATCACCTGTTCGACTTGGATTTGCAGGTTCTTCTTCTGTAAATGGCAGACTACGGCGAAGTaGGGGCACGAACCCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VESITCSTWICRFFFCKWQTTAK*GHEPGQ Trigger: CTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCTG...CCATTTACAGAAGAAGAACCTGCAAATCCAAGTCGAACAGGTGATTGACTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS GCA 90 bp | ATTTGTTTTTCTGCACAGAGCCCTTTGTTTCAGAAGTATCCTCCATaGCAGAGGTCTGGGCATTGTCCAGTTTGGCCACTTCCTCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ICFSAQSPLFQKYPP*QRSGHCPVWPLPPS Trigger: CGAGGGAGGAAGTGGCCAAACTGGACAATGCCCAGACCTCTGGCATGGAGGATACTTCTGAAACAAAGGGCTCTGTGCAGAAAAACAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | TTTCATCTGCTTTCTCAGTTTTCACAGCTGGTTCTTCTAGAGCGCTaGCTGCAGAACACTTCCCAGAATCCACTGACCGCTCATCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FHLLSQFSQLVLLER*LQNTSQNPLTAHQL Trigger: GAGCTGATGAGCGGTCAGTGGATTCTGGGAAGTGTTCTGCAGCCAGCGCTCTAGAAGAACCAGCTGTGAAAACTGAGAAAGCAGATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | TGCAGGGTTCTGTGGCAGACAAAGTGGGTTTTAAAGAGAGATCCGTaGCTTTCTCAGAAGGTTCGAGAGGCATGTCCATGTTCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRVLWQTKWVLKRDP*LSQKVREACPCSEA Trigger: GGCTTCTGAACATGGACATGCCTCTCGAACCTTCTGAGAAAGCCACGGATCTCTCTTTAAAACCCACTTTGTCTGCCACAGAACCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | TTCTTGGCTTTCTCCACCCTTTCCAGGCATTCTATGCCTGGGGTGTaGTTCTCACTCTTACTTCTGGGGGCCTTCTCTTCAACTTTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLAFSTLSRHSMPGV*FSLLLLGAFSSTFV Trigger: TACGAAAGTTGAAGAGAAGGCCCCCAGAAGTAAGAGTGAGAACCACACCCCAGGCATAGAATGCCTGGAAAGGGTGGAGAAAGCCAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CCGCCTCAGTCTTCGGCTGCAGAAGTCAGTGTCGCTGTCCTCATTGGATGGTGGATTTCCTTGTTCTTGTaGATCTCCTTTCAAGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPQSSAAEVSVAVLIGWWISLFL*ISFQVH Trigger: ATGCACTTGAAAGGAGATCAACAAGAACAAGGAAAT...CCACCATCCAATGAGGACAGCGACACTGACTTCTGCAGCCGAAGACTGAGGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135270.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATCCGCAAACGCCTGCTTaGCCTCATTGGCCGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVRVCREVIHAMDESFGNPQTPA*PHWPRR Trigger: CCTTCTCGGCCAATGAGGCAAAGCAGGCGTTTGCGG...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCAAAGTTCTCAATGGCCTaGCCAGGGCTCTGTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LPTRLNGILVTKGTPLIPKFSMA*PGLCPL Trigger: CAATGGACAGAGCCCTGGCAAGGCCATTGAGAACTT...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGGCACTGGCTGTGCCATaGTCCTTGGGGGTTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VFETQVSGAFAKWNTQSLALAVP*SLGVWD Trigger: GTCCCAAACCCCCAAGGACAATGGCACAGCCAGTGC...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAACCTCCTGTCCACCACTaGTCCCATTGGGGGCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKPPVHH*SHWGLD Trigger: GTCTAGCCCCCAATGGGACAAGTGGTGGACAGGAGG...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS GCA 90 bp | GGTTCTCACTCTTACTTCTGGGGGCCTTCTCTTCAACTTTCGTACTaGAGGGTTCTGTGGCAGACAAAGTGGGTTTTAAAGAGAGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: GSHSYFWGPSLQLSY*RVLWQTKWVLKRDP Trigger: CGGATCTCTCTTTAAAACCCACTTTGTCTGCCACAGAACCCTGCAGTACGAAAGTTGAAGAGAAGGCCCCCAGAAGTAAGAGTGAGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | TACTTCTGGGGGCCTTCTCTTCAACTTTCGTACTGCAGGGTTCTGTaGCAGACAAAGTGGGTTTTAAAGAGAGATCCGTGGCTTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YFWGPSLQLSYCRVL*QTKWVLKRDPWLSQ Trigger: CTGAGAAAGCCACGGATCTCTCTTTAAAACCCACTTTGTCTGCCACAGAACCCTGCAGTACGAAAGTTGAAGAGAAGGCCCCCAGAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCAAAGGCTGCAGAGGATTaGTCACTCTCGGATCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPTRLNGILVTKGTPLIPKAAED*SLSDPS Trigger: TGAAGGATCCGAGAGTGACAAATCCTCTGCAGCCTT...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATCCACCACTTGTCCCATaGGGGGCTAGACTTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNPPLVP*GARLAL Trigger: CAGTGCAAGTCTAGCCCCCAATGGGACAAGTGGTGG...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | TCCTCATCCTCTAGGGTGGGGCTTTCCCGAGAAGAATCTTCCTGTTaGCTCGAGTTTTTCAATAGGACAGGATCAATTTGTGCTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSRVGLSREESSC*LEFFNRTGSICAFR Trigger: CCTGAAAGCACAAATTGATCCTGTCCTATTGAAAAACTCGAGCCAACAGGAAGATTCTTCTCGGGAAAGCCCCACCCTAGAGGATGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGCAGACTACGGCGAAGTaGGGGCACGAACCCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AIINLQSSKLVTSQKDFKQTTAK*GHEPGQ Trigger: CTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCTG...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTTGGGCATTGTCCAGTTaGGCCACTTCCTCCCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLELLLQLSSKNSSWRTIWALSS*ATSSLE Trigger: CTCGAGGGAGGAAGTGGCCAAACTGGACAATGCCCA...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | AAACACTTACCCAGTATGCATGAGGCCCTGGATTCGATCTCCAGCATGAACAGATCTGCACAGAGCCCTTaGTTTCAGAAGTATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KHLPSMHEALDSISSMNRSAQSP*FQKYPP Trigger: TGGAGGATACTTCTGAAACAAAGGGCTCTGTGCAGA...TCTGTTCATGCTGGAGATCGAATCCAGGGCCTCATGCATACTGGGTAAGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS GCA 90 bp | AGAATTTGTATCCTTCTCTGCTTTCTTCAAGTGATCCTTCTTGTCTaGTGTTTGCAAAGATGCCGGCTCCCCTTCCACTCCATCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RICILLCFLQVILLV*CLQRCRLPFHSIFS Trigger: GGAGAAGATGGAGTGGAAGGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGAGAAGGATACAAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATTACATGAGGCCATCTTaGTCTCGCCCAATTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNYMRPS*SRPIGW Trigger: CCAGCCAATTGGGCGAGACAAAGATGGCCTCATGTA...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCAAAAGCACACACTGAAGCAATGCTGAAGGCTTCAGATGTGCCAGGCAAGATCGCTTCGATTCTTTaGTTAGCTCATCATCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAKAHTEAMLKASDVPGKIASIL*LAHHLQ Trigger: CTGAAGATGATGAGCTAACAAAAGAATCGAAGCGAT...CTTGCCTGGCACATCTGAAGCCTTCAGCATTGCTTCAGTGTGTGCTTTTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTCCAGGGCTCTGTCCATaGGTGGAAGGCAAGTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: VLELLLQLSSKNSSWRTIPGLCP*VEGKST Trigger: AGTAGACTTGCCTTCCACCAATGGACAGAGCCCTGG...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CTACCAACGAGGCTAAACGGTATTCTTGTCACAAAGGGAACTCCACTCATCCCAATTGTCCTTGGGGGTTaGGGACTTTTCAGTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPTRLNGILVTKGTPLIPIVLGG*GLFSCF Trigger: AAAGCAACTGAAAAGTCCCAAACCCCCAAGGACAAT...TGGGATGAGTGGAGTTCCCTTTGTGACAAGAATACCGTTTAGCCTCGTTGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 90 bp | ACCTTGCTTGCTTTAGAATTTGTATCCTTCTCTGCTTTCTTCAAGTaGTCCTTCTTGTCTGCTGTTTGCAAAGATGCCGGCTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLALEFVSFSAFFK*SFLSAVCKDAGSPS Trigger: GGAAGGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGAGAAGGATACAAATTCTAAAGCAAGCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 90 bp | AGAGTGGCTCACAACCAGCTCCAGGGGATCTATAGCACCCTCTTCTaGCCTTTGTGGAGGAATGATGTTTTCAATACTGATACCAACATA | + |
|
Preference number: 5 (lower is better) Translates to: RVAHNQLQGIYSTLF*PLWRNDVFNTDTNI Trigger: TATGTTGGTATCAGTATTGAAAACATCATTCCTCCACAAAGGTCAGAAGAGGGTGCTATAGATCCCCTGGAGCTGGTTGTGAGCCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135270.3 |
||
| CDS-3UTR CAA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATGCTCCACCAATTCTTTaGGTACTTCTCCGTTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNAPPIL*VLLRCR Trigger: TCGGCAACGGAGAAGTACCAAAAGAATTGGTGGAGC...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCCAAGAAGAGCCATCTaGATCATCTTGTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: STGAFSHPKFCFGPSQIWPRRAI*IILFFY Trigger: ATAGAAGAACAAGATGATCAAGATGGCTCTTCTTGG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGTGCACGATTGACATGCACCAACTCTTGCTAAAGGGAAGTATAATGAAATCAATGGAGGTCTTCTaGGCTTTCTCCACCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQCTIDMHQLLLKGSIMKSMEVF*AFSTLS Trigger: GGAAAGGGTGGAGAAAGCCAAGAAGACCTCCATTGA...TTTCATTATACTTCCCTTTAGCAAGAGTTGGTGCATGTCAATCGTGCACTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | TTGGGCCCTCACAGATTTGGAATGCATTCATATCCACCCTTTTCACAAAGTCAGAAGTTCGACCCACACTaGCTTTCTCTTCTTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPHRFGMHSYPPFSQSQKFDPH*LSLLPC Trigger: GCAAGGAAGAAGAGAAAGCAAGTGTGGGTCGAACTT...CTGACTTTGTGAAAAGGGTGGATATGAATGCATTCCAAATCTGTGAGGGCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGTCTTCTTCATCTAGGTaGCTATCACTGTCAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: STGAFSHPKFCFGPSQIWSSSSR*LSLSRS Trigger: TGATCTTGACAGTGATAGCAACCTAGATGAAGAAGA...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAATCCGGTGTAGCCGCTaGCGGGATGGTTTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSIRCSR*RDGLPS Trigger: GGAAGGCAAACCATCCCGCAAGCGGCTACACCGGAT...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGTGCTTTCTCCCACCCTAAATTCTGTTTTGGGCCCTCACAGATTTGGCAACTTCTTCTGGTATaGGACTCAATTTTTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: STGAFSHPKFCFGPSQIWQLLLV*DSIFGC Trigger: ACATCCAAAAATTGAGTCCAATACCAGAAGAAGTTG...CCAAATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGCCAGAGGTCTGGGCATaGTCCAGTTTGGCCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIINLQSSKLVTSQKDFKPEVWA*SSLATS Trigger: GGAAGTGGCCAAACTGGACAATGCCCAGACCTCTGG...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGCCAGTCCATCGAACTTaGCCTTTGGGTTTTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFETQVSGAFAKWNTQSLPVHRT*PLGFTL Trigger: CAAGGTAAAACCCAAAGGCAAAGTTCGATGGACTGG...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 90 bp | TTTTTAAGCTTCTCTGTTTCCTCAGTAGATTTCTCTATGATGTCTTaGGATTTGATGTTGCTACCAAAGTCGGCTCGCTCAGGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLSFSVSSVDFSMMS*DLMLLPKSARSGSC Trigger: GCAGGAGCCTGAGCGAGCCGACTTTGGTAGCAACATCAAATCTCAAGACATCATAGAGAAATCTACTGAGGAAACAGAGAAGCTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | CAACTTCTTCTGGTATTGGACTCAATTTTTGGATGTCCTTATCAATaGAGGTCTTCTTGGCTTTCTCCACCCTTTCCAGGCATTCTATGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLLVLDSIFGCPYQ*RSSWLSPPFPGILC Trigger: GCATAGAATGCCTGGAAAGGGTGGAGAAAGCCAAGAAGACCTCCATTGATAAGGACATCCAAAAATTGAGTCCAATACCAGAAGAAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 90 bp | TCTAGAGCACCCCTTACAACTTCTTCTGGTATTGGACTCAATTTTTaGATGTCCTTATCAATGGAGGTCTTCTTGGCTTTCTCCACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRAPLTTSSGIGLNF*MSLSMEVFLAFSTL Trigger: AAGGGTGGAGAAAGCCAAGAAGACCTCCATTGATAAGGACATCCAAAAATTGAGTCCAATACCAGAAGAAGTTGTAAGGGGTGCTCTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTGTAAATGGAGGTTTGGGGCAAATAAAAGACAAGGAATGTGCCAATCAGCTCCACCAATTCTTTaGGTACTTCTCCGTTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FFCKWRFGANKRQGMCQSAPPIL*VLLRCR Trigger: TCGGCAACGGAGAAGTACCAAAAGAATTGGTGGAGC...TGATTGGCACATTCCTTGTCTTTTATTTGCCCCAAACCTCCATTTACAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAGAAGTGAAGGAAACCACCTCAGTGTGGCATGTGTGTTGTTGCAAACAATCCTAATTGTCAACTaGATGCCTTCCTTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGRSEGNHLSVACVLLQTILIVN*MPSFFL Trigger: AAGGAAGAAGGAAGGCATCAAGTTGACAATTAGGAT...TGTTTGCAACAACACACATGCCACACTGAGGTGGTTTCCTTCACTTCTTCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGCTTCTTGTCTGCTGTTaGCAAAGATGCCGGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AIINLQSSKLVTSQKDFKLLVCC*QRCRLP Trigger: GGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAAG...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGCATCGAACTTTGCCTTaGGGTTTTACCTTGCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VFETQVSGAFAKWNTQSLHRTLP*GFTLLA Trigger: AGCAAGCAAGGTAAAACCCAAAGGCAAAGTTCGATG...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | TGTTTACATGGGAATAGCTTGTCCTCAGTGTTGTGTAGCCAGTTATCTAGCAAACCTTCACTTTCGTCATaGCTGGAGTATTTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLHGNSLSSVLCSQLSSKPSLSS*LEYFHL Trigger: CAGGTGGAAATACTCCAGCAATGACGAAAGTGAAGG...TTTGCTAGATAACTGGCTACACAACACTGAGGACAAGCTATTCCCATGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTGGAGCTTCTGCTTCAGCTCTCATCTAAAAACAGTAGTTGGAGAACTATTGGAAGGCCACACTTTTaGCAAGGTTCATCGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VLELLLQLSSKNSSWRTIGRPHF*QGSSSS Trigger: AGATGACGATGAACCTTGCAAAAAGTGTGGCCTTCC...AATAGTTCTCCAACTACTGTTTTTAGATGAGAGCTGAAGCAGAAGCTCCAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGGATCCGTCACTGATCTaGAATTCATCCTCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFETQVSGAFAKWNTQSLDPSLI*NSSSLS Trigger: AGAGAGTGAGGATGAATTCAAGATCAGTGACGGATC...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | TACACTGTTTCAATTCTAAGTTCTGGAACTGTAAAAATCTGGCTACCTCTCACAGCTGTGCCATTGTCCTaGGGGGTTTGGGACTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YTVSILSSGTVKIWLPLTAVPLS*GVWDFS Trigger: TGAAAAGTCCCAAACCCCCAAGGACAATGGCACAGC...TGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACATTGGGGGCTAGACTaGCACTGGCTGTGCCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSHWGLD*HWLCHC Trigger: ACAATGGCACAGCCAGTGCAAGTCTAGCCCCCAATG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATAGAAAACTCAGGCTCTaGTGGAGGAATGATGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CVRVCREVIHAMDESFGNRKLRL*WRNDVF Trigger: GAAAACATCATTCCTCCACAAGAGCCTGAGTTTTCT...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS GCA 90 bp | GCCTTTGGGTTTTACCTTGCTTGCTTTAGAATTTGTATCCTTCTCTaGTTTCTTCAAGTGATCCTTCTTGTCTGCTGTTTGCAAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: AFGFYLACFRICILL*FLQVILLVCCLQRC Trigger: GCATCTTTGCAAACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGAGAAGGATACAAATTCTAAAGCAAGCAAGGTAAAACCCAAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCGTGTGTGTAGGGAGGTAATTCATGCAATGGATGAAAGCTTTGGAAATTTACACAAAGGTCCTTaGACTGGACTGTCAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: CVRVCREVIHAMDESFGNLHKGP*TGLSKS Trigger: TGATTTTGACAGTCCAGTCAAAGGACCTTTGTGTAA...ATTTCCAAAGCTTTCATCCATTGCATGAATTACCTCCCTACACACACGCACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACGGAGTACTTCTTCTTaGGGGTCTTTCTCCGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSRSTSS*GSFSAN Trigger: GTTTGCGGAGAAAGACCCCAAAGAAGAAGTACTCCG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGTTTTCTGGTTCCTTCTaGATCGCCTTCGCCGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AIINLQSSKLVTSQKDFKFSGSF*IAFAGF Trigger: AAACCCGGCGAAGGCGATCAAGAAGGAACCAGAAAA...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGTCATCTTCAGAGTTCTaGGACATAAAGCTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFETQVSGAFAKWNTQSLSSSEF*DIKLSS Trigger: TGAAGAGAGCTTTATGTCCAAGAACTCTGAAGATGA...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATGGTACTGTTAAACTCTaGACAGATCTTGATCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNGTVKL*TDLDQV Trigger: TACTTGATCAAGATCTGTCAAGAGTTTAACAGTACC...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS-3UTR CAA 90 bp | GCATCCTTGTGGTTACCCAGAATGTGTGTATGCACACATTTCCTCGTAAGAAATGCCATCTTGATCATCTaGTTCTTCTATGTACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASLWLPRMCVCTHFLVRNAILII*FFYVHS Trigger: AGAATGTACATAGAAGAACAAGATGATCAAGATGGC...ATTTCTTACGAGGAAATGTGTGCATACACACATTCTGGGTAACCACAAGGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS-3UTR CAA 90 bp | GTTTTTGAAACCCAAGTCAGTGGGGCATTTGCTAAGTGGAATACTCAGTCTTTGTTTCTCTATGATGTCTaGAGATTTGATGTTGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: VFETQVSGAFAKWNTQSLFLYDV*RFDVAT Trigger: GGTAGCAACATCAAATCTCAAGACATCATAGAGAAA...CAAAGACTGAGTATTCCACTTAGCAAATGCCCCACTGACTTGGGTTTCAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 90 bp | TCACTCAGCTTAATTTCACGTTTCTTCAGTGGTATCTTGGCTTGCTaGTCATTTTTAAGCTTCTCTGTTTCCTCAGTAGATTTCTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLISRFFSGILAC*SFLSFSVSSVDFSM Trigger: CATAGAGAAATCTACTGAGGAAACAGAGAAGCTTAAAAATGATCAGCAAGCCAAGATACCACTGAAGAAACGTGAAATTAAGCTGAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS-3UTR CAA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCATTAGAATTTCTGGGCTaGCATTTTCAAGGGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSLEFLG*HFQGTD Trigger: GTCAGTCCCTTGAAAATGCAAGCCCAGAAATTCTAA...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS-3UTR CAA 90 bp | GCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCAAGAATGGGCTCCCTACTTaGTTTTCAAAGTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIINLQSSKLVTSQKDFKNGLPT*FSKSSS Trigger: GGAAGAAGACTTTGAAAACAAAGTAGGGAGCCCATT...CTTGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS-3UTR CAA 90 bp | TACACTGTTTCAATTCTAAGTTCTGGAACTGTAAAAATCTGGCTACCTCTCACAATTTCCTTGTTCTTGTaGATCTCCTTTCAAGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YTVSILSSGTVKIWLPLTISLFL*ISFQVH Trigger: ATGCACTTGAAAGGAGATCAACAAGAACAAGGAAAT...TGTGAGAGGTAGCCAGATTTTTACAGTTCCAGAACTTAGAATTGAAACAGTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS-3UTR CAA 90 bp | CAGCAATTATTAATCTTCAAAGTTCAAAACTGGTCACTTCCCAGAAAGACTTCACAATGCAGCATTGCCTaGCTTGCTTTAGAATTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QQLLIFKVQNWSLPRKTSQCSIA*LALEFV Trigger: TACAAATTCTAAAGCAAGCAAGGCAATGCTGCATTG...TGAAGTCTTTCTGGGAAGTGACCAGTTTTGAACTTTGAAGATTAATAATTGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123731.8 |
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| CDS CCA 72 bp | CGTAGCGTTCCAAGAAGGAGCAGACTACGGCGAAGTTaGGGCACGAACCCGGGCAGCCCGGAGGAGCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: RSVPRRSRLRRS*GTNPGSPEEPS Trigger: CGATGGCTCCTCCGGGCTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCTGCTCCTTCTTGGAACGCTACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107153.3 ENSMUST00000127891.3 |
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| CDS CAA 90 bp | GAGCCCTTTGTTTCAGAAGTATCCTCCATGCCAGAGGTCTGGGCATaGTCCAGTTTGGCCACTTCCTCCCTCGAGGACTCAGAATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EPFVSEVSSMPEVWA*SSLATSSLEDSESS Trigger: AGAGGATTCTGAGTCCTCGAGGGAGGAAGTGGCCAAACTGGACAATGCCCAGACCTCTGGCATGGAGGATACTTCTGAAACAAAGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS GCA 72 bp | TCTTCTTGGCTTTCTCCACCCTTTCCAGGCATTCTATaGCTGGGGTGTGGTTCTCACTCTTACTTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSWLSPPFPGIL*LGCGSHSYFWG Trigger: CCCCCAGAAGTAAGAGTGAGAACCACACCCCAGGCATAGAATGCCTGGAAAGGGTGGAGAAAGCCAAGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS GCA 72 bp | CTTCAAGTGATCCTTCTTGTCTGCTGTTTGCAAAGATaGCGGCTCCCCTTCCACTCCATCTTCTCCGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQVILLVCCLQR*RLPFHSIFSVS Trigger: GCTGACGGAGAAGATGGAGTGGAAGGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAAGGATCACTTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS GCA 72 bp | TCTGCACAGAGCCCTTTGTTTCAGAAGTATCCTCCATaGCAGAGGTCTGGGCATTGTCCAGTTTGGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SAQSPLFQKYPP*QRSGHCPVWPL Trigger: AAGTGGCCAAACTGGACAATGCCCAGACCTCTGGCATGGAGGATACTTCTGAAACAAAGGGCTCTGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CCA 72 bp | CTTTCTCAGTTTTCACAGCTGGTTCTTCTAGAGCGCTaGCTGCAGAACACTTCCCAGAATCCACTGACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSQFSQLVLLER*LQNTSQNPLTA Trigger: AGCGGTCAGTGGATTCTGGGAAGTGTTCTGCAGCCAGCGCTCTAGAAGAACCAGCTGTGAAAACTGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 90 bp | TGTATCCTTCTCTGCTTTCTTCAAGTGATCCTTCTTGTCTGCTGTTaGCAAAGATGCCGGCTCCCCTTCCACTCCATCTTCTCCGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CILLCFLQVILLVCC*QRCRLPFHSIFSVS Trigger: GCTGACGGAGAAGATGGAGTGGAAGGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGAGAAGGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 72 bp | TCAGAAGCCCAGGCTCCTCTAACCTTGCTTTCTGACTaGGGCTCTCTATGTCAGGTACAGAGCTGTCTATAC | + |
|
Preference number: 6 (lower is better) Translates to: SEAQAPLTLLSD*GSLCQVQSCLY Trigger: GTATAGACAGCTCTGTACCTGACATAGAGAGCCTCAGTCAGAAAGCAAGGTTAGAGGAGCCTGGGCTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS GCA 72 bp | ATCCTTCTCTGCTTTCTTCAAGTGATCCTTCTTGTCTaGTGTTTGCAAAGATGCCGGCTCCCCTTCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILLCFLQVILLV*CLQRCRLPFHS Trigger: GGAGTGGAAGGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGAGAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 72 bp | GGGCCTTCTCTTCAACTTTCGTACTGCAGGGTTCTGTaGCAGACAAAGTGGGTTTTAAAGAGAGATCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPSLQLSYCRVL*QTKWVLKRDPW Trigger: CCACGGATCTCTCTTTAAAACCCACTTTGTCTGCCACAGAACCCTGCAGTACGAAAGTTGAAGAGAAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 72 bp | ATTCTATGCCTGGGGTGTGGTTCTCACTCTTACTTCTaGGGGCCTTCTCTTCAACTTTCGTACTGCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ILCLGCGSHSYF*GPSLQLSYCRV Trigger: AACCCTGCAGTACGAAAGTTGAAGAGAAGGCCCCCAGAAGTAAGAGTGAGAACCACACCCCAGGCATAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 72 bp | CTCTGCTTTCTTCAAGTGATCCTTCTTGTCTGCTGTTaGCAAAGATGCCGGCTCCCCTTCCACTCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCFLQVILLVCC*QRCRLPFHSIF Trigger: GAAGATGGAGTGGAAGGGGAGCCGGCATCTTTGCAAACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CCA 72 bp | CTGTGGCAGACAAAGTGGGTTTTAAAGAGAGATCCGTaGCTTTCTCAGAAGGTTCGAGAGGCATGTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LWQTKWVLKRDP*LSQKVREACPC Trigger: ACATGGACATGCCTCTCGAACCTTCTGAGAAAGCCACGGATCTCTCTTTAAAACCCACTTTGTCTGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 90 bp | GGTATTGGACTCAATTTTTGGATGTCCTTATCAATGGAGGTCTTCTaGGCTTTCTCCACCCTTTCCAGGCATTCTATGCCTGGGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GIGLNFWMSLSMEVF*AFSTLSRHSMPGVW Trigger: CCACACCCCAGGCATAGAATGCCTGGAAAGGGTGGAGAAAGCCAAGAAGACCTCCATTGATAAGGACATCCAAAAATTGAGTCCAATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CCA 72 bp | CAACTTTCGTACTGCAGGGTTCTGTGGCAGACAAAGTaGGTTTTAAAGAGAGATCCGTGGCTTTCTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QLSYCRVLWQTK*VLKRDPWLSQK Trigger: CTTCTGAGAAAGCCACGGATCTCTCTTTAAAACCCACTTTGTCTGCCACAGAACCCTGCAGTACGAAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS TCA 72 bp | CACAACCAGCTCCAGGGGATCTATAGCACCCTCTTCTaGCCTTTGTGGAGGAATGATGTTTTCAATACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HNQLQGIYSTLF*PLWRNDVFNTD Trigger: ATCAGTATTGAAAACATCATTCCTCCACAAAGGTCAGAAGAGGGTGCTATAGATCCCCTGGAGCTGGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135270.3 |
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| CDS CCA 72 bp | CTGGTATTGGACTCAATTTTTGGATGTCCTTATCAATaGAGGTCTTCTTGGCTTTCTCCACCCTTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVLDSIFGCPYQ*RSSWLSPPFPG Trigger: GCCTGGAAAGGGTGGAGAAAGCCAAGAAGACCTCCATTGATAAGGACATCCAAAAATTGAGTCCAATACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS TCA 72 bp | CCTCAGTTTCTGGCAAAGGCTTTTCTAGCTTTACAATaGCTGGCAGTTTCGCAAGCTCCTTTTCATCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PQFLAKAFLALQ*LAVSQAPFHLL Trigger: AAGCAGATGAAAAGGAGCTTGCGAAACTGCCAGTCATTGTAAAGCTAGAAAAGCCTTTGCCAGAAACTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 72 bp | CTCAATTTTTGGATGTCCTTATCAATGGAGGTCTTCTaGGCTTTCTCCACCCTTTCCAGGCATTCTATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LNFWMSLSMEVF*AFSTLSRHSMP Trigger: AGGCATAGAATGCCTGGAAAGGGTGGAGAAAGCCAAGAAGACCTCCATTGATAAGGACATCCAAAAATTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 90 bp | GGGCAATCTGGCTTCTTCTTCCGACTTGATATCCTAATTGTCAACTaGATGCCTTCCTTCTTCCTTTCAGAGGTGATCTCAGTGTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQSGFFFRLDILIVN*MPSFFLSEVISVFS Trigger: AGAAAACACTGAGATCACCTCTGAAAGGAAGAAGGAAGGCATCAAGTTGACAATTAGGATATCAAGTCGGAAGAAGAAGCCAGATTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 72 bp | CTGACTCTAGAGCACCCCTTACAACTTCTTCTGGTATaGGACTCAATTTTTGGATGTCCTTATCAATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTLEHPLQLLLV*DSIFGCPYQWR Trigger: CCTCCATTGATAAGGACATCCAAAAATTGAGTCCAATACCAGAAGAAGTTGTAAGGGGTGCTCTAGAGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 72 bp | GGCTTCTTCTTCCGACTTGATATCCTAATTGTCAACTaGATGCCTTCCTTCTTCCTTTCAGAGGTGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GFFFRLDILIVN*MPSFFLSEVIS Trigger: TGAGATCACCTCTGAAAGGAAGAAGGAAGGCATCAAGTTGACAATTAGGATATCAAGTCGGAAGAAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 90 bp | ATTTTTAAGCTTCTCTGTTTCCTCAGTAGATTTCTCTATGATGTCTaGAGATTTGATGTTGCTACCAAAGTCGGCTCGCTCAGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IFKLLCFLSRFLYDV*RFDVATKVGSLRLL Trigger: CAGGAGCCTGAGCGAGCCGACTTTGGTAGCAACATCAAATCTCAAGACATCATAGAGAAATCTACTGAGGAAACAGAGAAGCTTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS GCA 72 bp | ACTCATTTCAAGATAGCCTTTCTTCTCCATCTCCCATaGCCAGGTACTGTTAAACTCTTGACAGATCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: THFKIAFLLHLP*PGTVKLLTDLD Trigger: ATCAAGATCTGTCAAGAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAGAAAGGCTATCTTGAAATGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 90 bp | ATCTTGATCATCTTGTTCTTCTATGTACATTCTCACATTATGGTCTaGATCCAACTGGTACCAATACATGAGGCCATCTTTGTCTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ILIILFFYVHSHIMV*IQLVPIHEAIFVSP Trigger: GGGCGAGACAAAGATGGCCTCATGTATTGGTACCAGTTGGATCAAGACCATAATGTGAGAATGTACATAGAAGAACAAGATGATCAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 90 bp | CAGATCTTGATCAAGTATTTTTCCCATCTGTCTGCTGTAACGGATTaGCCAATCTTCCTCATTAACTTCAAATGCAGCTCCACCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: QILIKYFSHLSAVTD*PIFLINFKCSSTNS Trigger: AGAATTGGTGGAGCTGCATTTGAAGTTAATGAGGAAGATTGGCAAATCCGTTACAGCAGACAGATGGGAAAAATACTTGATCAAGATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 72 bp | ACCCCTTACAACTTCTTCTGGTATTGGACTCAATTTTaGGATGTCCTTATCAATGGAGGTCTTCTTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TPYNFFWYWTQF*DVLINGGLLGF Trigger: AAAGCCAAGAAGACCTCCATTGATAAGGACATCCAAAAATTGAGTCCAATACCAGAAGAAGTTGTAAGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 90 bp | GAATTCTTGATCAAGTATTTTTCCCATCTGTCTGCTGTAACGGATTaGCCAATCTTCCTCATTAACTTCAAATGCAGCTCCACCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: EFLIKYFSHLSAVTD*PIFLINFKCSSTNS Trigger: AGAATTGGTGGAGCTGCATTTGAAGTTAATGAGGAAGATTGGCAAATCCGTTACAGCAGACAGATGGGAAAAATACTTGATCAAGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127891.3 |
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| CDS TCA 72 bp | TCTTGTTCTTCTATGTACATTCTCACATTATGGTCTTaGTCCAACTGGTACCAATACATGAGGCCATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SCSSMYILTLWS*SNWYQYMRPSL Trigger: CAAAGATGGCCTCATGTATTGGTACCAGTTGGATCAAGACCATAATGTGAGAATGTACATAGAAGAACAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 72 bp | TCTTTAGTTGGAGTAGCTGACTTACACAAAGGTCCTTaGACTGGACTGTCAAAATCATCACTCAGCTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SLVGVADLHKGP*TGLSKSSLSLI Trigger: AATTAAGCTGAGTGATGATTTTGACAGTCCAGTCAAAGGACCTTTGTGTAAGTCAGCTACTCCAACTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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| CDS CAA 90 bp | CAACTCGTTTCGATTTCTGACAATGCATTTCCAAGAAGAGCCATCTaGATCATCTTGTTCTTCTATGTACATTCTCACATTATGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLVSISDNAFPRRAI*IILFFYVHSHIMVL Trigger: CAAGACCATAATGTGAGAATGTACATAGAAGAACAAGATGATCAAGATGGCTCTTCTTGGAAATGCATTGTCAGAAATCGAAACGAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 90 bp | TTCAAAACTTCTTTAGTTGGAGTAGCTGACTTACACAAAGGTCCTTaGACTGGACTGTCAAAATCATCACTCAGCTTAATTTCACGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FKTSLVGVADLHKGP*TGLSKSSLSLISRF Trigger: GAAACGTGAAATTAAGCTGAGTGATGATTTTGACAGTCCAGTCAAAGGACCTTTGTGTAAGTCAGCTACTCCAACTAAAGAAGTTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 90 bp | AAAATTTGGAATTACCTTGTCATCATTAATCTCTCCATTCACAAGTaGTTTCCCTTCATGACTCAAAGCACTGATGGTAGAGACCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KIWNYLVIINLSIHK*FPFMTQSTDGRDPF Trigger: AAACGGGTCTCTACCATCAGTGCTTTGAGTCATGAAGGGAAACAACTTGTGAATGGAGAGATTAATGATGACAAGGTAATTCCAAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 72 bp | TATGTCATCTTTCAAAACTTCTTTAGTTGGAGTAGCTaGCTTACACAAAGGTCCTTTGACTGGACTGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: YVIFQNFFSWSS*LTQRSFDWTVK Trigger: TTTGACAGTCCAGTCAAAGGACCTTTGTGTAAGTCAGCTACTCCAACTAAAGAAGTTTTGAAAGATGACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS GCA 72 bp | TTTTACCTTGCTTGCTTTAGAATTTGTATCCTTCTCTaGTTTCTTCAAGTGATCCTTCTTGTCTGCTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FYLACFRICILL*FLQVILLVCCL Trigger: CAAACAGCAGACAAGAAGGATCACTTGAAGAAAGCAGAGAAGGATACAAATTCTAAAGCAAGCAAGGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 72 bp | ATCTTGTTCTTCTATGTACATTCTCACATTATGGTCTaGATCCAACTGGTACCAATACATGAGGCCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ILFFYVHSHIMV*IQLVPIHEAIF Trigger: AAAGATGGCCTCATGTATTGGTACCAGTTGGATCAAGACCATAATGTGAGAATGTACATAGAAGAACAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 72 bp | CGATTTCTGACAATGCATTTCCAAGAAGAGCCATCTTaGTCATCTTGTTCTTCTATGTACATTCTCACATTA | + |
|
Preference number: 6 (lower is better) Translates to: RFLTMHFQEEPS*SSCSSMYILTL Trigger: TAATGTGAGAATGTACATAGAAGAACAAGATGATCAAGATGGCTCTTCTTGGAAATGCATTGTCAGAAATCG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS TCA 72 bp | TTAATTTCACGTTTCTTCAGTGGTATCTTGGCTTGCTaGTCATTTTTAAGCTTCTCTGTTTCCTCAGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LISRFFSGILAC*SFLSFSVSSVD Trigger: ATCTACTGAGGAAACAGAGAAGCTTAAAAATGATCAGCAAGCCAAGATACCACTGAAGAAACGTGAAATTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
||
| CDS CAA 72 bp | TCGATTTCTGACAATGCATTTCCAAGAAGAGCCATCTaGATCATCTTGTTCTTCTATGTACATTCTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: SISDNAFPRRAI*IILFFYVHSHI Trigger: AATGTGAGAATGTACATAGAAGAACAAGATGATCAAGATGGCTCTTCTTGGAAATGCATTGTCAGAAATCGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107153.3 |
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