Pregenerated sensors for RSBN1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039968Ensembl transcript IDs: ENSMUST00000036489.10, ENSMUST00000196780.5, ENSMUST00000197089.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCGCGATCCAGTCTCGCCTTACTGTTCTTGCCTTCCGTGTTATTTaGTGTTCTGATCTTTTCAGGTATGGGAGCCATCCCAGGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SAIQSRLTVLAFRVI*CSDLFRYGSHPRLF Trigger: GAAGAGCCTGGGATGGCTCCCATACCTGAAAAGATCAGAACACCAAATAACACGGAAGGCAAGAACAGTAAGGCGAGACTGGATCGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR GCA 90 bp | CTGTGTGTTTCCGCCTGCAATGTTTACAGTGCATCTGGCCCTAAGTaGTTGATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACA | + |
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Preference number: 1 (lower is better) Translates to: LCVSACNVYSASGPK*LILHSYGQALRNVT Trigger: TGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTATCAAGCACTTAGGGCCAGATGCACTGTAAACATTGCAGGCGGAAACACACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| 3UTR GCA 90 bp | TCTCAGTGTGAGCTCCCAGAACTGATGATGTGGGACCTGATGCTATaGCCTTTTCATGAGTACTTTCACTTGTACTGTGACAAGTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: SQCELPELMMWDLML*PFHEYFHLYCDKCP Trigger: AGGACACTTGTCACAGTACAAGTGAAAGTACTCATGAAAAGGGCATAGCATCAGGTCCCACATCATCAGTTCTGGGAGCTCACACTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR TCA 90 bp | TTTGTTGGTGTTCTCAAATGCAGAATCCATGTCAATGTGAAAATCTaGAAACTGAGCGCGATCCAGTCTCGCCTTACTGTTCTTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: FVGVLKCRIHVNVKI*KLSAIQSRLTVLAF Trigger: GAAGGCAAGAACAGTAAGGCGAGACTGGATCGCGCTCAGTTTTCAGATTTTCACATTGACATGGATTCTGCATTTGAGAACACCAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR TCA 90 bp | GACTTGAACGTACAGAACTATGCTGCTGTGTATCAACTGTATTACTaGCACTGCCAGGACACGAGTCTTCCTTTAAGTCTTTGTTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: DLNVQNYAAVYQLYY*HCQDTSLPLSLCWC Trigger: ACACCAACAAAGACTTAAAGGAAGACTCGTGTCCTGGCAGTGTCAGTAATACAGTTGATACACAGCAGCATAGTTCTGTACGTTCAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR GCA 90 bp | CTTTTCATGAGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTaGGTGATAGAATTTAAGTCGAACGTGCCATGCCAAACTGCATAC | + |
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Preference number: 1 (lower is better) Translates to: LFMSTFTCTVTSVLL*VIEFKSNVPCQTAY Trigger: GTATGCAGTTTGGCATGGCACGTTCGACTTAAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCATGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR TCA 90 bp | TATGTGCCCACCTCAAGTAAGGACACAAGACACTGCTGCTGGTGCTaGTTTTCATCAGTTCTAGTGAAATACATTTCTCTAAGTGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: YVPTSSKDTRHCCWC*FSSVLVKYISLSGF Trigger: GAAACCACTTAGAGAAATGTATTTCACTAGAACTGATGAAAATCAGCACCAGCAGCAGTGTCTTGTGTCCTTACTTGAGGTGGGCACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR TCA 90 bp | TGTACAAATTTAGCACAAACTGTCATCCTCACTTCTGTCTTGACTTaGACGTACAGAACTATGCTGCTGTGTATCAACTGTATTACTGAC | + |
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Preference number: 1 (lower is better) Translates to: CTNLAQTVILTSVLT*TYRTMLLCINCITD Trigger: GTCAGTAATACAGTTGATACACAGCAGCATAGTTCTGTACGTTCAAGTCAAGACAGAAGTGAGGATGACAGTTTGTGCTAAATTTGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGGTGAAAGTGGAGCCCACTGAGGTGGGAACAGCGGTCTCCCAAAAGGCCTCTGTGAATGATGGCTaGGTCACTGTCACTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TEVKVEPTEVGTAVSQKASVNDG*VTVTAL Trigger: AAGGGCAGTGACAGTGACCCAGCCATCATTCACAGA...GGCCTTTTGGGAGACCGCTGTTCCCACCTCAGTGGGCTCCACTTTCACCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGGTGAAAGTGGAGCCCACTGAGGTGGGAACAGCGGTCTCCCAAAAGGCCCTGGCCCTAAGTGCTTaGTACTTCACAGTTATGGAC | + |
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Preference number: 2 (lower is better) Translates to: TEVKVEPTEVGTAVSQKALALSA*YFTVMD Trigger: GTCCATAACTGTGAAGTATCAAGCACTTAGGGCCAG...GGCCTTTTGGGAGACCGCTGTTCCCACCTCAGTGGGCTCCACTTTCACCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCTGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCATCACCGTGCAGGCACTaGCCACCCTGTCTCCTACAC | + |
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Preference number: 2 (lower is better) Translates to: ACWFTHTSPSEMYAFDRASPCRH*PPCLLH Trigger: GTGTAGGAGACAGGGTGGCCAGTGCCTGCACGGTGA...TGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCAGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR CAA 90 bp | TGTGTTTCCGCCTGCAATGTTTACAGTGCATCTGGCCCTAAGTGCTaGATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACAACG | + |
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Preference number: 2 (lower is better) Translates to: CVSACNVYSASGPKC*ILHSYGQALRNVTT Trigger: CGTTGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTATCAAGCACTTAGGGCCAGATGCACTGTAAACATTGCAGGCGGAAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTGCGTGATAGAATTTTCCTGGCATAGCGAATaGCTTCTCTCCTCAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: MSTFTCTVTSVLLCVIEFSWHSE*LLSSAG Trigger: ACCAGCTGAGGAGAGAAGGCATTCGCTATGCCAGGA...AAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR TCA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCAATGGCTTACCAAAACTaGGGTGAAAGTGGAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: QTLFTLPRFLISLLHESPMAYQN*GESGAH Trigger: GTGGGCTCCACTTTCACCTCAGTTTTGGTAAGCCAT...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR TCA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCACCCCAGCTAGAAGCATaGGCTTTGATGGCTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: QTLFTLPRFLISLLHESPPQLEA*ALMAYQ Trigger: TTGGTAAGCCATCAAAGCTCATGCTTCTAGCTGGGG...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR GCA 90 bp | ACCTCCACGCCACCTGCAAACATCCTGAGATCCTCCTATAAGCCACCAGCATTTTTGTCAGTATGTTTTTaGAAGCTCAACAGAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TSTPPANILRSSYKPPAFLSVCF*KLNRKH Trigger: ATGCTTTCTGTTGAGCTTGCAAAAACATACTGACAA...AAATGCTGGTGGCTTATAGGAGGATCTCAGGATGTTTGCAGGTGGCGTGGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATACCTTAGGTTTGCCCTaGAGGCTGGCGAAGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: WFTHTSPSEMYAFDRAINTLGLP*RLAKGP Trigger: AGGACCCTTCGCCAGCCTGCAGGGCAAACCTAAGGT...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATAATTTCTCTGCTCCATaGATCCCCACCCCCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: WFTHTSPSEMYAFDRAINNFSAP*IPTPTS Trigger: GGAGGTGGGGGTGGGGATTCATGGAGCAGAGAAATT...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR TCA 90 bp | ATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTAGTCAATGTGAAAATCTaGAAACTGAGCGCGATCCAG | + |
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Preference number: 2 (lower is better) Translates to: ILHSYGQALRNVTTLHQLVNVKI*KLSAIQ Trigger: CTGGATCGCGCTCAGTTTTCAGATTTTCACATTGAC...TAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR TCA 90 bp | GGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATCTTACCAAAACTGAGGTaGAAGTGGAGCCCACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GLHILHLQRCMHLTEQLILPKLR*KWSPLR Trigger: CCTCAGTGGGCTCCACTTTCACCTCAGTTTTGGTAA...GATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR GCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTGTGTGTTTCCGCCTaGAATGTTTACAGTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: WTGTEECDNATSTIFCNRLCVSA*NVYSAS Trigger: AGATGCACTGTAAACATTGCAGGCGGAAACACACAG...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| 3UTR-3UTR TCA 90 bp | CTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTTTCCTGGCCCTAAGTGCTTaGTACTTCACAGTTATGGAC | + |
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Preference number: 2 (lower is better) Translates to: LHQLYFVTDLRAIPRLAFLALSA*YFTVMD Trigger: GTCCATAACTGTGAAGTATCAAGCACTTAGGGCCAG...GAAAGCAAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| 3UTR-3UTR GCA 90 bp | GAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCCGTGCCATGCCAAACTaGATACAGCTGAAACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ECDNATSTIFCNRLESNSRAMPN*IQLKLS Trigger: AGACAGTTTCAGCTGTATGCAGTTTGGCATGGCACG...GGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR CCA 90 bp | ATGAGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTGCGTGATAGAATTTCCTTCTCTCCTCAGCTaGTTAAGTTTTGCATCATCA | + |
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Preference number: 2 (lower is better) Translates to: MSTFTCTVTSVLLCVIEFPSLLS*LSFASS Trigger: TGATGATGCAAAACTTAACCAGCTGAGGAGAGAAGG...AAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR TCA 90 bp | ACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTTCCTCACTTCTGTCTTaGCTTGAACGTACAGAACTA | + |
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Preference number: 2 (lower is better) Translates to: TTLHQLYFVTDLRAIPRLSSLLS*LERTEL Trigger: TAGTTCTGTACGTTCAAGTCAAGACAGAAGTGAGGA...AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR GCA 90 bp | ACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCATCTGGCCCTAAGTaGTTGATACTTCACAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: TTLHQLYFVTDLRAIPRLASGPK*LILHSY Trigger: ATAACTGTGAAGTATCAAGCACTTAGGGCCAGATGC...AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| 3UTR-3UTR GCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCTGTGTGTTTCCGCCTaGAATGTTTACAGTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPLCVSA*NVYSAS Trigger: AGATGCACTGTAAACATTGCAGGCGGAAACACACAG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| 3UTR-3UTR GCA 90 bp | GAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCACAAGTGTCCTCCTCTaGGTGATAGAATTTAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: ECDNATSTIFCNRLESNSTSVLL*VIEFKS Trigger: CGACTTAAATTCTATCACGCAGAGGAGGACACTTGT...GGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR CCA 90 bp | GAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCGCCTTCCGTGTTATTTaGTGTTCTGATCTTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ECDNATSTIFCNRLESNSAFRVI*CSDLFR Trigger: CCTGAAAAGATCAGAACACCAAATAACACGGAAGGC...GGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCAAACTGCATACAGCTaGAACTGTCTTGAACTGATG | + |
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Preference number: 2 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPQTAYS*NCLELM Trigger: CATCAGTTCAAGACAGTTTCAGCTGTATGCAGTTTG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATGCATCTGGCCCTAAGTaGTTGATACTTCACAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: WFTHTSPSEMYAFDRAINASGPK*LILHSY Trigger: ATAACTGTGAAGTATCAAGCACTTAGGGCCAGATGC...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR-3UTR GCA 90 bp | GAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCGAACGTACAGAACTATaGTGCTGTGTATCAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: ECDNATSTIFCNRLESNSERTEL*CCVSTV Trigger: TACAGTTGATACACAGCAGCATAGTTCTGTACGTTC...GGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR TCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTTGTTATTTGGTGTTCTaGTCTTTTCAGGTATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPCYLVF*SFQVWE Trigger: CTCCCATACCTGAAAAGATCAGAACACCAAATAACA...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR GCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAATTTAAGTCGAACGTaGCATGCCAAACTGCATACA | + |
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Preference number: 2 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPNLSRT*HAKLHT Trigger: TGTATGCAGTTTGGCATGGCACGTTCGACTTAAATT...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR GCA 72 bp | GTGGAAGCAGACTGGAACCATGCTCAAGTCCATGGGTaGAGATGTCTACTCACCGTGCAGGCACTGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: VEADWNHAQVHG*RCLLTVQALAT Trigger: GGTGGCCAGTGCCTGCACGGTGAGTAGACATCTGCACCCATGGACTTGAGCATGGTTCCAGTCTGCTTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR CCA 72 bp | CGGAGTGGAAGCAGACTGGAACCATGCTCAAGTCCATaGGTGCAGATGTCTACTCACCGTGCAGGCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: RSGSRLEPCSSP*VQMSTHRAGTG Trigger: GCCAGTGCCTGCACGGTGAGTAGACATCTGCACCCATGGACTTGAGCATGGTTCCAGTCTGCTTCCACTCCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR TCA 72 bp | ACCGTGCAGGCACTGGCCACCCTGTCTCCTACACAATaGACCCCTAGAGCATCTCTAGAGGAGGTACACCTT | + |
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Preference number: 3 (lower is better) Translates to: TVQALATLSPTQ*TPRASLEEVHL Trigger: AAGGTGTACCTCCTCTAGAGATGCTCTAGGGGTTCATTGTGTAGGAGACAGGGTGGCCAGTGCCTGCACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR GCA 72 bp | ATGCTCAAGTCCATGGGTGCAGATGTCTACTCACCGTaGAGGCACTGGCCACCCTGTCTCCTACACAATGAA | + |
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Preference number: 3 (lower is better) Translates to: MLKSMGADVYSP*RHWPPCLLHNE Trigger: TTCATTGTGTAGGAGACAGGGTGGCCAGTGCCTGCACGGTGAGTAGACATCTGCACCCATGGACTTGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR TCA 72 bp | AGAAGCATGAGCTTTGATGGCTTACCAAAACTGAGGTaGAAGTGGAGCCCACTGAGGTGGGAACAGCGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RSMSFDGLPKLR*KWSPLRWEQRS Trigger: AGACCGCTGTTCCCACCTCAGTGGGCTCCACTTTCACCTCAGTTTTGGTAAGCCATCAAAGCTCATGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR GCA 72 bp | GAGCTCCCAGAACTGATGATGTGGGACCTGATGCTATaGCCTTTTCATGAGTACTTTCACTTGTACTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: ELPELMMWDLML*PFHEYFHLYCD Trigger: GTCACAGTACAAGTGAAAGTACTCATGAAAAGGGCATAGCATCAGGTCCCACATCATCAGTTCTGGGAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR CCA 72 bp | CTTGGTTCTCAGTGTGAGCTCCCAGAACTGATGATGTaGGACCTGATGCTATGCCCTTTTCATGAGTACTTT | + |
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Preference number: 3 (lower is better) Translates to: LGSQCELPELMM*DLMLCPFHEYF Trigger: AAAGTACTCATGAAAAGGGCATAGCATCAGGTCCCACATCATCAGTTCTGGGAGCTCACACTGAGAACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR TCA 72 bp | GATGATCTGACAGTGTTTGCTAGTCACATCTGTGAATaGTGGCTGGGTCACTGTCACTGCCCTTGGTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: DDLTVFASHICE*WLGHCHCPWFK Trigger: TTTAAACCAAGGGCAGTGACAGTGACCCAGCCATCATTCACAGATGTGACTAGCAAACACTGTCAGATCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| 3UTR GCA 72 bp | AGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTaGGTGATAGAATTTAAGTCGAACGTGCCATGCCAA | + |
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Preference number: 3 (lower is better) Translates to: STFTCTVTSVLL*VIEFKSNVPCQ Trigger: TTGGCATGGCACGTTCGACTTAAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR TCA 72 bp | GTTCTCAAATGCAGAATCCATGTCAATGTGAAAATCTaGAAACTGAGCGCGATCCAGTCTCGCCTTACTGTT | + |
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Preference number: 3 (lower is better) Translates to: VLKCRIHVNVKI*KLSAIQSRLTV Trigger: AACAGTAAGGCGAGACTGGATCGCGCTCAGTTTTCAGATTTTCACATTGACATGGATTCTGCATTTGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR TCA 72 bp | GTACAGAACTATGCTGCTGTGTATCAACTGTATTACTaGCACTGCCAGGACACGAGTCTTCCTTTAAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: VQNYAAVYQLYY*HCQDTSLPLSL Trigger: AAGACTTAAAGGAAGACTCGTGTCCTGGCAGTGTCAGTAATACAGTTGATACACAGCAGCATAGTTCTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| 3UTR-3UTR CAA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGATCTGGCCCTAAGTGCTaGATACTTCACAGTTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: WTGTEECDNATSTIFCNRSGPKC*ILHSYG Trigger: TCCATAACTGTGAAGTATCAAGCACTTAGGGCCAGA...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| 3UTR TCA 72 bp | TTAGCACAAACTGTCATCCTCACTTCTGTCTTGACTTaGACGTACAGAACTATGCTGCTGTGTATCAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LAQTVILTSVLT*TYRTMLLCINC Trigger: ACAGTTGATACACAGCAGCATAGTTCTGTACGTTCAAGTCAAGACAGAAGTGAGGATGACAGTTTGTGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGGGACCTGATGCTATGCCCTTTTCATGAGTACTTTCACTTGTACTGTGACTATTTTGTAACAGACTaGAGAGCAATTCCTAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: MWDLMLCPFHEYFHLYCDYFVTD*RAIPRL Trigger: AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATA...GTCACAGTACAAGTGAAAGTACTCATGAAAAGGGCATAGCATCAGGTCCCACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATCTCTGGCCCTAAGTGCTaGATACTTCACAGTTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLHILHLQRCMHLTEQLISGPKC*ILHSYG Trigger: TCCATAACTGTGAAGTATCAAGCACTTAGGGCCAGA...GATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| 3UTR TCA 72 bp | ACCTCAAGTAAGGACACAAGACACTGCTGCTGGTGCTaGTTTTCATCAGTTCTAGTGAAATACATTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TSSKDTRHCCWC*FSSVLVKYISL Trigger: TAGAGAAATGTATTTCACTAGAACTGATGAAAATCAGCACCAGCAGCAGTGTCTTGTGTCCTTACTTGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGAATTGTCAGTATGTTTTaGCAAGCTCAACAGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WTGTEECDNATSTIFCNRIVSMF*QAQQKA Trigger: TGCTTTCTGTTGAGCTTGCAAAAACATACTGACAAT...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| 3UTR-3UTR CAA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCATGAGTACTTTCACTaGTACTGTGACAAGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPHEYFH*YCDKCP Trigger: AGGACACTTGTCACAGTACAAGTGAAAGTACTCATG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| 3UTR-3UTR CAA 90 bp | CTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTTTCTATTTTGTAACAGACTaGAGAGCAATTCCTAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LHQLYFVTDLRAIPRLAFYFVTD*RAIPRL Trigger: AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATA...GAAAGCAAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | ATGTGGGACCTGATGCTATGCCCTTTTCATGAGTACTTTCACTTGTACTGTGACCTCTGGGGCTGCAGCTaGCCGCCGTTCCCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MWDLMLCPFHEYFHLYCDLWGCS*PPFPPL Trigger: CAGCGGCGGGAACGGCGGGCAGCTGCAGCCCCAGAG...GTCACAGTACAAGTGAAAGTACTCATGAAAAGGGCATAGCATCAGGTCCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAGGGCTGCCGAAGCTCTaGGGCTGCAGCTGCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ACWFTHTSPSEMYAFDRAGLPKL*GCSCPP Trigger: CGGCGGGCAGCTGCAGCCCCAGAGCTTCGGCAGCCC...TGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCAGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTGAAAGTGGAGCCCACTGAGGTGGGAACAGCGGTCTCCCAAAAGGCCTCTCCCGAGGCTCACTaGTTCGAGGTAGATACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVKVEPTEVGTAVSQKASPEAH*FEVDTE Trigger: TTCAGTATCTACCTCGAACCAGTGAGCCTCGGGAGA...GGCCTTTTGGGAGACCGCTGTTCCCACCTCAGTGGGCTCCACTTTCACCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | ATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTAGCTTCTCCTTGGGTCTaGGCGGCTTGGCGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILHSYGQALRNVTTLHQLASPWV*AAWRRP Trigger: CGGCCGCCGCCAAGCCGCGCAGACCCAAGGAGAAGC...TAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCTAAAGACTCCAGCCACATTGACTTCATTAGTTAGAAGGATAAAACCATTGCGCGGCAGCGGCTaGGACGAGGAAGCGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLKTPATLTSLVRRIKPLRGSG*DEEAEA Trigger: AGCCTCCGCTTCCTCGTCTCAGCCGCTGCCGCGCAA...TGGTTTTATCCTTCTAACTAATGAAGTCAATGTGGCTGGAGTCTTTAGCCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGATTGCGCGGCAGCGGCTaGGACGAGGAAGCGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WTGTEECDNATSTIFCNRLRGSG*DEEAEA Trigger: AGCCTCCGCTTCCTCGTCTCAGCCGCTGCCGCGCAA...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | GAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCGGGCTGCCGAAGCTCTaGGGCTGCAGCTGCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECDNATSTIFCNRLESNSGLPKL*GCSCPP Trigger: CGGCGGGCAGCTGCAGCCCCAGAGCTTCGGCAGCCC...GGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | ATGAGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTGCGTGATAGAATTTGCAGCAGCGAGGGAGTaGCCAGCAGTTTGCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MSTFTCTVTSVLLCVIEFAAARE*PAVCAA Trigger: TGCCGCGCAAACTGCTGGTCACTCCCTCGCTGCTGC...AAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGACACAGTGCACAGCCTTaGGCACCCCAACAGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WTGTEECDNATSTIFCNRHSAQP*APQQPP Trigger: CGGCGGCTGTTGGGGTGCTCAAGGCTGTGCACTGTG...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCTCTGGGGCTGCAGCTaGCCGCCGTTCCCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPLWGCS*PPFPPL Trigger: CAGCGGCGGGAACGGCGGGCAGCTGCAGCCCCAGAG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | GGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATCCCGAAGCTCTGGGGCTaGAGCTGCCCGCCGTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLHILHLQRCMHLTEQLIPKLWG*SCPPFP Trigger: CGGGAACGGCGGGCAGCTGCAGCCCCAGAGCTTCGG...GATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | GAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCGCTTCTCCTTGGGTCTaGGCGGCTTGGCGGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECDNATSTIFCNRLESNSASPWV*AAWRRP Trigger: CGGCCGCCGCCAAGCCGCGCAGACCCAAGGAGAAGC...GGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCAAACAGCTCCGAGAGGTaGACGAGGAGGAGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QTLFTLPRFLISLLHESPNSSER*TRRRRR Trigger: CCGCCGCCTCCTCCTCGTCCACCTCTCGGAGCTGTT...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGAAACAGCTCCGAGAGGTaGACGAGGAGGAGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTGTEECDNATSTIFCNRNSSER*TRRRRR Trigger: CCGCCGCCTCCTCCTCGTCCACCTCTCGGAGCTGTT...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGATCTCGCGCTTCTCCTTaGGTCTGCGCGGCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTGTEECDNATSTIFCNRSRASP*VCAAWR Trigger: CCGCCAAGCCGCGCAGACCCAAGGAGAAGCGCGAGA...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | GCCTGCTGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAGGCTGGTGCTCAATGTaGATGAGCTGCCTGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACWFTHTSPSEMYAFDRAGWCSM*MSCLNA Trigger: GGCGTTCAGGCAGCTCATTCACATTGAGCACCAGCC...TGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCAGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCTAAAGACTCCAGCCACATTGACTTCATTAGTTAGAAGGATAAAACCACTGCTCCCACCAAGCTaGTCTGTCGCATCGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLKTPATLTSLVRRIKPLLPPS*SVASGQ Trigger: CTGGCCCGATGCGACAGATCAGCTTGGTGGGAGCAG...TGGTTTTATCCTTCTAACTAATGAAGTCAATGTGGCTGGAGTCTTTAGCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | ACCTCCACGCCACCTGCAAACATCCTGAGATCCTCCTATAAGCCACCAGCATTTGATCATTTGTTCTCCTaGACGTACCCACATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSTPPANILRSSYKPPAFDHLFS*TYPHDG Trigger: CCCATCATGTGGGTACGTCCAGGAGAACAAATGATC...AAATGCTGGTGGCTTATAGGAGGATCTCAGGATGTTTGCAGGTGGCGTGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | ATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTAGGCTGGTGCTCAATGTaGATGAGCTGCCTGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILHSYGQALRNVTTLHQLGWCSM*MSCLNA Trigger: GGCGTTCAGGCAGCTCATTCACATTGAGCACCAGCC...TAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | ATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTACCCCAACAGCCGCCGTaGTCTGTCGTTCAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILHSYGQALRNVTTLHQLPQQPP*SVVQSL Trigger: AAGGCTTTGAACGACAGACCACGGCGGCTGTTGGGG...TAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTGCAGCAGCGAGGGAGTaGCCAGCAGTTTGCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPAAARE*PAVCAA Trigger: TGCCGCGCAAACTGCTGGTCACTCCCTCGCTGCTGC...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | TGGAATAAAATAAATGTCATTATCATACAGCTGAATCCTGGCATAGCGAATGCCCTGCTCCCACCAAGCTaGTCTGTCGCATCGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WNKINVIIIQLNPGIANALLPPS*SVASGQ Trigger: CTGGCCCGATGCGACAGATCAGCTTGGTGGGAGCAG...GGCATTCGCTATGCCAGGATTCAGCTGTATGATAATGACATTTATTTTATTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCACAGTGCACAGCCTTaGGCACCCCAACAGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPHSAQP*APQQPP Trigger: CGGCGGCTGTTGGGGTGCTCAAGGCTGTGCACTGTG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | GCCTGCTGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCACCTTCTTCTCCTCGGTaGGAACCTTCTTGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ACWFTHTSPSEMYAFDRAPSSPR*EPSWQT Trigger: TGTCTGCCAAGAAGGTTCGCACCGAGGAGAAGAAGG...TGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCAGCAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCTAAAGACTCCAGCCACATTGACTTCATTAGTTAGAAGGATAAAACCAAGGAGACGCTCGGGCTaGCGGAGAAAGAGTAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLKTPATLTSLVRRIKPRRRSG*RRKSNS Trigger: GCTGTTACTCTTTCTCCGCCAGCCCGAGCGTCTCCT...TGGTTTTATCCTTCTAACTAATGAAGTCAATGTGGCTGGAGTCTTTAGCCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATTCTCGCGCTTCTCCTTaGGTCTGCGCGGCTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINSRASP*VCAAWR Trigger: CCGCCAAGCCGCGCAGACCCAAGGAGAAGCGCGAGA...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCTAAAGACTCCAGCCACATTGACTTCATTAGTTAGAAGGATAAAACCAGCATCATCAACCCACTaGACACACTGGGACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLKTPATLTSLVRRIKPASSTH*THWDSG Trigger: TCCACTGTCCCAGTGTGTGCAGTGGGTTGATGATGC...TGGTTTTATCCTTCTAACTAATGAAGTCAATGTGGCTGGAGTCTTTAGCCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | ATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATCTCCCGAGGCTCACTaGTTCGAGGTAGATACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILHSYGQALRNVTTLHQLSPEAH*FEVDTE Trigger: TTCAGTATCTACCTCGAACCAGTGAGCCTCGGGAGA...TAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| 3UTR CAA 72 bp | GACCTGATGCTATGCCCTTTTCATGAGTACTTTCACTaGTACTGTGACAAGTGTCCTCCTCTGCGTGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLMLCPFHEYFH*YCDKCPPLRDR Trigger: TCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCATGAAAAGGGCATAGCATCAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| 3UTR CAA 72 bp | ATCTTTTCAGGTATGGGAGCCATCCCAGGCTCTTCCTaGATTCTTAGAGCTGCACCAGGTTCGTGTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: IFSGMGAIPGSS*ILRAAPGSCLI Trigger: AATTAAACACGAACCTGGTGCAGCTCTAAGAATCAAGGAAGAGCCTGGGATGGCTCCCATACCTGAAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCAGCTGGTTAAGTTTTGCATCATCAACCCACTGCACACACTAAAAAGAGATCATTTGTTCTCCTaGACGTACCCACATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQLVKFCIINPLHTLKRDHLFS*TYPHDG Trigger: CCCATCATGTGGGTACGTCCAGGAGAACAAATGATC...TCTTTTTAGTGTGTGCAGTGGGTTGATGATGCAAAACTTAACCAGCTGAGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCCCCAACAGCCGCCGTaGTCTGTCGTTCAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPPQQPP*SVVQSL Trigger: AAGGCTTTGAACGACAGACCACGGCGGCTGTTGGGG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | ATGAGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTGCGTGATAGAATTTTCTTCTGCAAATCTCTaGATCTCCATGGGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSTFTCTVTSVLLCVIEFSSANL*ISMGDR Trigger: CCTGTCTCCCATGGAGATGCAGAGATTTGCAGAAGA...AAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCACACTTCTTCATCAACTaGTCCCACCAAGCTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTLFTLPRFLISLLHESPHFFIN*SHQADL Trigger: CAGATCAGCTTGGTGGGAGCAGTTGATGAAGAAGTG...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGACACTTCTTCATCAACTaGTCCCACCAAGCTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTGTEECDNATSTIFCNRHFFIN*SHQADL Trigger: CAGATCAGCTTGGTGGGAGCAGTTGATGAAGAAGTG...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | GAATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCCTGGCATAGCGAATaGCTTCTCTCCTCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ECDNATSTIFCNRLESNSSWHSE*LLSSAG Trigger: ACCAGCTGAGGAGAGAAGGCATTCGCTATGCCAGGA...GGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCACGTGCCATGCCAAACTaGATACAGCTGAAACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLFTLPRFLISLLHESPRAMPN*IQLKLS Trigger: AGACAGTTTCAGCTGTATGCAGTTTGGCATGGCACG...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATACCCACTGCACACACTaGGACAGTGGAGGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINTHCTH*DSGGSC Trigger: ACATGAGCCTCCACTGTCCCAGTGTGTGCAGTGGGT...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCTAAAGACTCCAGCCACATTGACTTCATTAGTTAGAAGGATAAAACCAAGCAGACAGCAATCCTaGACAGATGGTCTGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLKTPATLTSLVRRIKPSRQQS*TDGLNR Trigger: TCTATTCAGACCATCTGTTCAGGATTGCTGTCTGCT...TGGTTTTATCCTTCTAACTAATGAAGTCAATGTGGCTGGAGTCTTTAGCCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | GGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATCCTTTCACTTGTACTGTaGCAAGTGTCCTCCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLHILHLQRCMHLTEQLILSLVL*QVSSSA Trigger: CGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAG...GATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTTCCCAGGCTCTTCCTTaGTTCTTAGAGCTGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPSQALP*FLELHQ Trigger: CTGGTGCAGCTCTAAGAATCAAGGAAGAGCCTGGGA...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCCTTCTTCTCCTCGGTaGGAACCTTCTTGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPPSSPR*EPSWQT Trigger: TGTCTGCCAAGAAGGTTCGCACCGAGGAGAAGAAGG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCTAAAGACTCCAGCCACATTGACTTCATTAGTTAGAAGGATAAAACCATCGCCTTACTGTTCTTaGCTTCCGTGTTATTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLKTPATLTSLVRRIKPSPYCS*LPCYLV Trigger: CACCAAATAACACGGAAGGCAAGAACAGTAAGGCGA...TGGTTTTATCCTTCTAACTAATGAAGTCAATGTGGCTGGAGTCTTTAGCCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| 3UTR CAA 72 bp | TTTAGCACAAACTGTCATCCTCACTTCTGTCTTGACTaGAACGTACAGAACTATGCTGCTGTGTATCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSTNCHPHFCLD*NVQNYAAVYQL Trigger: CAGTTGATACACAGCAGCATAGTTCTGTACGTTCAAGTCAAGACAGAAGTGAGGATGACAGTTTGTGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCACCTTCTCTCCTCAGCTaGTTAAGTTTTGCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLFTLPRFLISLLHESPPSLLS*LSFASS Trigger: TGATGATGCAAAACTTAACCAGCTGAGGAGAGAAGG...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGATACTTAAGTTTTACCTaGGACAGTGGAGGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WTGTEECDNATSTIFCNRYLSFT*DSGGSC Trigger: ACATGAGCCTCCACTGTCCCAGGTAAAACTTAAGTA...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | TGGAATAAAATAAATGTCATTATCATACAGCTGAATCCTGGCATAGCGAATGCCAGCAGACAGCAATCCTaGACAGATGGTCTGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: WNKINVIIIQLNPGIANASRQQS*TDGLNR Trigger: TCTATTCAGACCATCTGTTCAGGATTGCTGTCTGCT...GGCATTCGCTATGCCAGGATTCAGCTGTATGATAATGACATTTATTTTATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCAGCTGGTTAAGTTTTGCATCATCAACCCACTGCACACACTAAAAAGACTCCATTTTCACTGGTaGATTGGGAAAATTATACGA | + |
|
Preference number: 4 (lower is better) Translates to: SPQLVKFCIINPLHTLKRLHFHW*IGKIIR Trigger: TCGTATAATTTTCCCAATTCACCAGTGAAAATGGAG...TCTTTTTAGTGTGTGCAGTGGGTTGATGATGCAAAACTTAACCAGCTGAGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | CTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTTTCGTCAATGTGAAAATCTaGAAACTGAGCGCGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLYFVTDLRAIPRLAFVNVKI*KLSAIQ Trigger: CTGGATCGCGCTCAGTTTTCAGATTTTCACATTGAC...GAAAGCAAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATTCTTCTGCAAATCTCTaGATCTCCATGGGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINSSANL*ISMGDR Trigger: CCTGTCTCCCATGGAGATGCAGAGATTTGCAGAAGA...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGAACCCACAAATTCTTCTaGAAATCTCTGCATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WTGTEECDNATSTIFCNRTHKFF*KSLHLH Trigger: ATGGAGATGCAGAGATTTGCAGAAGAATTTGTGGGT...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | ATGAGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTGCGTGATAGAATTTACCCACAAATTCTTCTaGAAATCTCTGCATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MSTFTCTVTSVLLCVIEFTHKFF*KSLHLH Trigger: ATGGAGATGCAGAGATTTGCAGAAGAATTTGTGGGT...AAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATCTGCCCCATGAACAATaGCCATTACATAGAAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINLPHEQ*PLHRKP Trigger: CGGCTTTCTATGTAATGGGCATTGTTCATGGGGCAG...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTCTGCCCCATGAACAATaGCCATTACATAGAAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPLPHEQ*PLHRKP Trigger: CGGCTTTCTATGTAATGGGCATTGTTCATGGGGCAG...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCACACTTAAGATGCTTTTaGCTTCTTGATCTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTLFTLPRFLISLLHESPHLRCF*LLDLQQ Trigger: CTGCTGAAGATCAAGAAGCCAAAAGCATCTTAAGTG...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | ACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTCAAACTGCATACAGCTaGAACTGTCTTGAACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTLHQLYFVTDLRAIPRLQTAYS*NCLELM Trigger: CATCAGTTCAAGACAGTTTCAGCTGTATGCAGTTTG...AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | ACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTATGCCCTTTTCATaGGTACTTTCACTTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLHQLYFVTDLRAIPRLAMPFS*VLSLVL Trigger: CAGTACAAGTGAAAGTACTCATGAAAAGGGCATAGC...AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | ATGAGTACTTTCACTTGTACTGTGACAAGTGTCCTCCTCTGCGTGATAGAATTTAACAAATTACATCTTTaGTTACTCGGGGTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSTFTCTVTSVLLCVIEFNKLHL*LLGVDQ Trigger: CTGATCAACCCCGAGTAACCAAAGATGTAATTTGTT...AAATTCTATCACGCAGAGGAGGACACTTGTCACAGTACAAGTGAAAGTACTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| 3UTR CAA 72 bp | TGTTTAATTTGTTGTGATTCATACTTAGAAGGAAGTTaGTCTGACAACACAGAGTCTGAGGAGGCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLICCDSYLEGS*SDNTESEEAWF Trigger: GAACCAAGCCTCCTCAGACTCTGTGTTGTCAGACAAACTTCCTTCTAAGTATGAATCACAACAAATTAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATTCCTCACTTCTGTCTTaGCTTGAACGTACAGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINSSLLS*LERTEL Trigger: TAGTTCTGTACGTTCAAGTCAAGACAGAAGTGAGGA...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | CTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTTTCAATTTAAGTCGAACGTaGCATGCCAAACTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: LHQLYFVTDLRAIPRLAFNLSRT*HAKLHT Trigger: TGTATGCAGTTTGGCATGGCACGTTCGACTTAAATT...GAAAGCAAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTACAAGTGTCCTCCTCTaGGTGATAGAATTTAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPTSVLL*VIEFKS Trigger: CGACTTAAATTCTATCACGCAGAGGAGGACACTTGT...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | CTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTTTCCACTTAAGATGCTTTTaGCTTCTTGATCTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLYFVTDLRAIPRLAFHLRCF*LLDLQQ Trigger: CTGCTGAAGATCAAGAAGCCAAAAGCATCTTAAGTG...GAAAGCAAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATGCCTTCCGTGTTATTTaGTGTTCTGATCTTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINAFRVI*CSDLFR Trigger: CCTGAAAAGATCAGAACACCAAATAACACGGAAGGC...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR TCA 90 bp | CTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTTTCCCTGAACAGATGGTCTaGATAGATTTGCTATACATT | + |
|
Preference number: 4 (lower is better) Translates to: LHQLYFVTDLRAIPRLAFPEQMV*IDLLYI Trigger: AATGTATAGCAAATCTATTCAGACCATCTGTTCAGG...GAAAGCAAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR TCA 90 bp | CTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTGCTTTCCTCCATTTTCACTGGTaGATTGGGAAAATTATACGA | + |
|
Preference number: 4 (lower is better) Translates to: LHQLYFVTDLRAIPRLAFLHFHW*IGKIIR Trigger: TCGTATAATTTTCCCAATTCACCAGTGAAAATGGAG...GAAAGCAAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATGTTGGTGTTCTCAAATaGAGAATCCATGTCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINVGVLK*RIHVNV Trigger: CACATTGACATGGATTCTGCATTTGAGAACACCAAC...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR GCA 90 bp | TGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATGAACGTACAGAACTATaGTGCTGTGTATCAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WFTHTSPSEMYAFDRAINERTEL*CCVSTV Trigger: TACAGTTGATACACAGCAGCATAGTTCTGTACGTTC...ATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CCA 90 bp | ACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTAACAAATTACATCTTTaGTTACTCGGGGTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTLHQLYFVTDLRAIPRLNKLHL*LLGVDQ Trigger: CTGATCAACCCCGAGTAACCAAAGATGTAATTTGTT...AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| 3UTR CAA 72 bp | AAAAGAATTACACTAGGGCTAAAGACTCCAGCCACATaGACTTCATTAGTTAGAAGGATAAAACCATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KRITLGLKTPAT*TSLVRRIKPST Trigger: TGTTGATGGTTTTATCCTTCTAACTAATGAAGTCAATGTGGCTGGAGTCTTTAGCCCTAGTGTAATTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS TCA 90 bp | GCGTGCAGCAGCGAGGGAGTGACCAGCAGTTTGCGCGGCAGCGGCTaGGACGAGGAAGCGGAGGCTGAGGAGACGCTCGGGCTGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACSSEGVTSSLRGSG*DEEAEAEETLGLAE Trigger: CTCCGCCAGCCCGAGCGTCTCCTCAGCCTCCGCTTCCTCGTCTCAGCCGCTGCCGCGCAAACTGCTGGTCACTCCCTCGCTGCTGCACGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS TCA 90 bp | GCGGGAGCAGGACGCGGTGAGGCTGAGCGTGCAGCAGCGAGGGAGTaGCCAGCAGTTTGCGCGGCAGCGGCTGAGACGAGGAAGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGAGRGEAERAAARE*PAVCAAAAETRKRR Trigger: CCTCCGCTTCCTCGTCTCAGCCGCTGCCGCGCAAACTGCTGGTCACTCCCTCGCTGCTGCACGCTCAGCCTCACCGCGTCCTGCTCCCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS CCA 90 bp | AGGAGACGCTCGGGCTGGCGGAGAAAGAGTAACAGCTCCGAGAGGTaGACGAGGAGGAGGCGGCGGGCCGAGCCGCGAAGCTCCACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRRSGWRRKSNSSER*TRRRRRAEPRSSTP Trigger: CGGCGTGGAGCTTCGCGGCTCGGCCCGCCGCCTCCTCCTCGTCCACCTCTCGGAGCTGTTACTCTTTCTCCGCCAGCCCGAGCGTCTCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS CCA 90 bp | GCAGCGGCTGAGACGAGGAAGCGGAGGCTGAGGAGACGCTCGGGCTaGCGGAGAAAGAGTAACAGCTCCGAGAGGTGGACGAGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAETRKRRLRRRSG*RRKSNSSERWTRRR Trigger: CCTCCTCCTCGTCCACCTCTCGGAGCTGTTACTCTTTCTCCGCCAGCCCGAGCGTCTCCTCAGCCTCCGCTTCCTCGTCTCAGCCGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS TCA 90 bp | GACCAGCAGTTTGCGCGGCAGCGGCTGAGACGAGGAAGCGGAGGCTaGGGAGACGCTCGGGCTGGCGGAGAAAGAGTAACAGCTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DQQFARQRLRRGSGG*GDARAGGERVTAPR Trigger: TCTCGGAGCTGTTACTCTTTCTCCGCCAGCCCGAGCGTCTCCTCAGCCTCCGCTTCCTCGTCTCAGCCGCTGCCGCGCAAACTGCTGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS TCA 90 bp | TGGTTACTCGGGGTTGATCAGGCCGCTGTCCACAGTGCACAGCCTTaGGCACCCCAACAGCCGCCGTGGTCTGTCGTTCAAAGCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WLLGVDQAAVHSAQP*APQQPPWSVVQSLV Trigger: GACAAGGCTTTGAACGACAGACCACGGCGGCTGTTGGGGTGCTCAAGGCTGTGCACTGTGGACAGCGGCCTGATCAACCCCGAGTAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS TCA 90 bp | ACCCCAACAGCCGCCGTGGTCTGTCGTTCAAAGCCTTGTCCTATGTaGTCCGCATGGGCTCTCGTCCTGTCTTCAAACAGCATCTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TPTAAVVCRSKPCPM*SAWALVLSSNSISR Trigger: TCGGGAGATGCTGTTTGAAGACAGGACGAGAGCCCATGCGGATCACATAGGACAAGGCTTTGAACGACAGACCACGGCGGCTGTTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS GCA 90 bp | CATGGGAGACAGGCAGGAGAGTTCATTACTGTAGGCATGGATGACTaGCGCGCCTCCGTTAGGCTGGTGCTCAATGTGAATGAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HGRQAGEFITVGMDD*RASVRLVLNVNELP Trigger: AGGCAGCTCATTCACATTGAGCACCAGCCTAACGGAGGCGCGGCAGTCATCCATGCCTACAGTAATGAACTCTCCTGCCTGTCTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTGAAAGTGGAGCCCACTGAGGTGGGAACAGCGGTCTCCCAAAAGGCCGATGCTTTTGGCTTCTaGATCTTCAGCAGACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TEVKVEPTEVGTAVSQKADAFGF*IFSRQQ Trigger: TTGCTGTCTGCTGAAGATCAAGAAGCCAAAAGCATC...GGCCTTTTGGGAGACCGCTGTTCCCACCTCAGTGGGCTCCACTTTCACCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CAA 90 bp | ACCTCCACGCCACCTGCAAACATCCTGAGATCCTCCTATAAGCCACCAGCATTTAGCCACAGGGATCATTaGTTCTCCTGGACGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSTPPANILRSSYKPPAFSHRDH*FSWTYP Trigger: TGGGTACGTCCAGGAGAACAAATGATCCCTGTGGCT...AAATGCTGGTGGCTTATAGGAGGATCTCAGGATGTTTGCAGGTGGCGTGGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
||
| CDS-3UTR CAA 90 bp | ACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTAGGCTTCCACAGTGCACAGCCTaGAGCACCCCAACAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTLHQLYFVTDLRAIPRLPQCTA*STPTAA Trigger: GGCGGCTGTTGGGGTGCTCAAGGCTGTGCACTGTGG...AAGCCTAGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
||
| CDS-3UTR CAA 90 bp | TGGAATAAAATAAATGTCATTATCATACAGCTGAATCCTGGCATAGCGAATGCCCCACAGTGCACAGCCTaGAGCACCCCAACAGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: WNKINVIIIQLNPGIANAPQCTA*STPTAA Trigger: GGCGGCTGTTGGGGTGCTCAAGGCTGTGCACTGTGG...GGCATTCGCTATGCCAGGATTCAGCTGTATGATAATGACATTTATTTTATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| CDS-3UTR CAA 90 bp | ATGTGGGACCTGATGCTATGCCCTTTTCATGAGTACTTTCACTTGTACTGTGACCTGTCGTTCAAAGCCTaGTCCTATGTGATCCGCATG | + |
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Preference number: 5 (lower is better) Translates to: MWDLMLCPFHEYFHLYCDLSFKA*SYVIRM Trigger: CATGCGGATCACATAGGACAAGGCTTTGAACGACAG...GTCACAGTACAAGTGAAAGTACTCATGAAAAGGGCATAGCATCAGGTCCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196780.5 |
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| CDS-3UTR CAA 90 bp | ATACTTCACAGTTATGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTAATCCCAGGCTCTTCCTaGATTCTTAGAGCTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: ILHSYGQALRNVTTLHQLIPGSS*ILRAAP Trigger: TGGTGCAGCTCTAAGAATCAAGGAAGAGCCTGGGAT...TAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCATAACTGTGAAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| CDS-3UTR CAA 90 bp | TGGACAGGCACTGAGGAATGTGACAACGCTACATCAACTATATTTTGTAACAGAGATGCTTTTGGCTTCTaGATCTTCAGCAGACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: WTGTEECDNATSTIFCNRDAFGF*IFSRQQ Trigger: TTGCTGTCTGCTGAAGATCAAGAAGCCAAAAGCATC...TCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATTCCTCAGTGCCTGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS-3UTR CAA 90 bp | GGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCAATTAATCCTGTCGTTCAAAGCCTaGTCCTATGTGATCCGCATG | + |
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Preference number: 5 (lower is better) Translates to: GLHILHLQRCMHLTEQLILSFKA*SYVIRM Trigger: CATGCGGATCACATAGGACAAGGCTTTGAACGACAG...GATTAATTGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| CDS-3UTR CAA 90 bp | GCCTGCTGGTTTACACATACTTCACCTTCAGAGATGTATGCATTTGACAGAGCATCTTTAATTTTGTCTTaGATTTTATCTCGCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ACWFTHTSPSEMYAFDRASLILS*ILSRGS Trigger: GCTGCCGCGAGATAAAATCAAAGACAAAATTAAAGA...TGCTCTGTCAAATGCATACATCTCTGAAGGTGAAGTATGTGTAAACCAGCAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| CDS-3UTR CAA 90 bp | CAAACCCTATTTACACTGCCACGATTTTTAATTTCTCTGCTCCATGAATCCCCACATGAGTACTTTCACTaGTACTGTGACAAGTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: QTLFTLPRFLISLLHESPHEYFH*YCDKCP Trigger: AGGACACTTGTCACAGTACAAGTGAAAGTACTCATG...TGGGGATTCATGGAGCAGAGAAATTAAAAATCGTGGCAGTGTAAATAGGGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036489.10 |
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| CDS-3UTR CAA 90 bp | AATGTGACAACGCTACATCAACTATATTTTGTAACAGACTTGAGAGCAATTCCTTCTTTAATTTTGTCTTaGATTTTATCTCGCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: NVTTLHQLYFVTDLRAIPSLILS*ILSRGS Trigger: GCTGCCGCGAGATAAAATCAAAGACAAAATTAAAGA...AGGAATTGCTCTCAAGTCTGTTACAAAATATAGTTGATGTAGCGTTGTCACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CCA 72 bp | GCCGCGAAGCTCCACGCCGCCGGGCTGCCGAAGCTCTaGGGCTGCAGCTGCCCGCCGTTCCCGCCGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: AAKLHAAGLPKL*GCSCPPFPPLP Trigger: GGGCAGCGGCGGGAACGGCGGGCAGCTGCAGCCCCAGAGCTTCGGCAGCCCGGCGGCGTGGAGCTTCGCGGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CCA 72 bp | TCGGGCTGGCGGAGAAAGAGTAACAGCTCCGAGAGGTaGACGAGGAGGAGGCGGCGGGCCGAGCCGCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SGWRRKSNSSER*TRRRRRAEPRS Trigger: GCTTCGCGGCTCGGCCCGCCGCCTCCTCCTCGTCCACCTCTCGGAGCTGTTACTCTTTCTCCGCCAGCCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS TCA 72 bp | AGCGAGGGAGTGACCAGCAGTTTGCGCGGCAGCGGCTaGGACGAGGAAGCGGAGGCTGAGGAGACGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: SEGVTSSLRGSG*DEEAEAEETLG Trigger: CCCGAGCGTCTCCTCAGCCTCCGCTTCCTCGTCTCAGCCGCTGCCGCGCAAACTGCTGGTCACTCCCTCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS GCA 72 bp | CGGCGGCTCCCGCGAGGAAGGCTGTACTTTGCCAGATaGTTCCTTCTCAGAGAGGAGAGCCACGGCGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RRLPRGRLYFAR*FLLREESHGAA Trigger: CGCGGCGCCGTGGCTCTCCTCTCTGAGAAGGAAGCATCTGGCAAAGTACAGCCTTCCTCGCGGGAGCCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CAA 72 bp | CTCCGCGGCGCCTTCTTCTCCTCGGTGCGAACCTTCTaGGCAGACATAGAGCCCGGCGGCTCCCGCGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRGAFFSSVRTF*ADIEPGGSREE Trigger: TTCCTCGCGGGAGCCGCCGGGCTCTATGTCTGCCAAGAAGGTTCGCACCGAGGAGAAGAAGGCGCCGCGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CAA 90 bp | CCGTTCACTCTCCGCGGCGCCTTCTTCTCCTCGGTGCGAACCTTCTaGGCAGACATAGAGCCCGGCGGCTCCCGCGAGGAAGGCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: PFTLRGAFFSSVRTF*ADIEPGGSREEGCT Trigger: AGTACAGCCTTCCTCGCGGGAGCCGCCGGGCTCTATGTCTGCCAAGAAGGTTCGCACCGAGGAGAAGAAGGCGCCGCGGAGAGTGAACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CCA 72 bp | GAGACGAGGAAGCGGAGGCTGAGGAGACGCTCGGGCTaGCGGAGAAAGAGTAACAGCTCCGAGAGGTGGACG | + |
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Preference number: 6 (lower is better) Translates to: ETRKRRLRRRSG*RRKSNSSERWT Trigger: CGTCCACCTCTCGGAGCTGTTACTCTTTCTCCGCCAGCCCGAGCGTCTCCTCAGCCTCCGCTTCCTCGTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS TCA 72 bp | GGGGTTGATCAGGCCGCTGTCCACAGTGCACAGCCTTaGGCACCCCAACAGCCGCCGTGGTCTGTCGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: GVDQAAVHSAQP*APQQPPWSVVQ Trigger: TTGAACGACAGACCACGGCGGCTGTTGGGGTGCTCAAGGCTGTGCACTGTGGACAGCGGCCTGATCAACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CAA 72 bp | CACCCCAACAGCCGCCGTGGTCTGTCGTTCAAAGCCTaGTCCTATGTGATCCGCATGGGCTCTCGTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HPNSRRGLSFKA*SYVIRMGSRPV Trigger: GACAGGACGAGAGCCCATGCGGATCACATAGGACAAGGCTTTGAACGACAGACCACGGCGGCTGTTGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CAA 90 bp | AGCCTTGAGCACCCCAACAGCCGCCGTGGTCTGTCGTTCAAAGCCTaGTCCTATGTGATCCGCATGGGCTCTCGTCCTGTCTTCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: SLEHPNSRRGLSFKA*SYVIRMGSRPVFKQ Trigger: CTGTTTGAAGACAGGACGAGAGCCCATGCGGATCACATAGGACAAGGCTTTGAACGACAGACCACGGCGGCTGTTGGGGTGCTCAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS TCA 72 bp | GCCGCCGTGGTCTGTCGTTCAAAGCCTTGTCCTATGTaGTCCGCATGGGCTCTCGTCCTGTCTTCAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: AAVVCRSKPCPM*SAWALVLSSNS Trigger: GCTGTTTGAAGACAGGACGAGAGCCCATGCGGATCACATAGGACAAGGCTTTGAACGACAGACCACGGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS GCA 72 bp | CAGGCAGGAGAGTTCATTACTGTAGGCATGGATGACTaGCGCGCCTCCGTTAGGCTGGTGCTCAATGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: QAGEFITVGMDD*RASVRLVLNVN Trigger: ATTCACATTGAGCACCAGCCTAACGGAGGCGCGGCAGTCATCCATGCCTACAGTAATGAACTCTCCTGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CAA 90 bp | ACTTTATGCTTCTTTTTCTCTCTCTCTTTGTCTTTCTCTTTAATTTaGTCTTTGATTTTATCTCGCGGCAGCGGCTTCGCCTCGCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: TLCFFFSLSLSFSLI*SLILSRGSGFASPF Trigger: GAACGGCGAGGCGAAGCCGCTGCCGCGAGATAAAATCAAAGACAAAATTAAAGAGAAAGACAAAGAGAGAGAGAAAAAGAAGCATAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036489.10 ENSMUST00000196780.5 |
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| CDS CAA 72 bp | TTCTCTCTCTCTTTGTCTTTCTCTTTAATTTTGTCTTaGATTTTATCTCTGAGAGGCTCTGAGAGGCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSLSLSFSLILS*ILSLRGSERRS Trigger: GGAACGCCTCTCAGAGCCTCTCAGAGATAAAATCAAAGACAAAATTAAAGAGAAAGACAAAGAGAGAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197089.2 |
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