Pregenerated sensors for RSAD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020641Ensembl transcript IDs: ENSMUST00000020970.10, ENSMUST00000137792.7
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGGGCATCTTCTCCTGAGTTCTCACCCTCAATTAGGAGGCACTaGAAAACCTTCCAGCGCACAGGGCTCAGGGCCTTGATGTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LRASSPEFSPSIRRH*KTFQRTGLRALMCS Trigger: TGAACACATCAAGGCCCTGAGCCCTGTGCGCTGGAAGGTTTTCCAGTGCCTCCTAATTGAGGGTGAGAACTCAGGAGAAGATGCCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR TCA 90 bp | TTTGAATATTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCAGCTTaGGTCAGCACAGTGAGTGATGTGTGTAAGCTCCAGCCATGGGGT | + |
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Preference number: 1 (lower is better) Translates to: FEYSAAAAAAAAAPA*VSTVSDVCKLQPWG Trigger: ACCCCATGGCTGGAGCTTACACACATCACTCACTGTGCTGACTCAAGCTGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAATATTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR TCA 90 bp | ATTCAGAAGGTTGGACCTCAGCTTCATGATTGCTTTCCTCTCATTTaGTCAAGTGGGTGTCTGGCCATGTCCTCTGGGATTTCCCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: IQKVGPQLHDCFPLI*SSGCLAMSSGISQV Trigger: CACCTGGGAAATCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCATGAAGCTGAGGTCCAACCTTCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR CCA 90 bp | ATCTGTGAGTCCATCGCTGCATCCCGACATGTCTCTCTCTATCTTTaGCTGTATTTCTGTGATGCCCCCTTCTCCTGGTCACAACACTTT | + |
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Preference number: 1 (lower is better) Translates to: ICESIAASRHVSLYL*LYFCDAPFSWSQHF Trigger: AAAGTGTTGTGACCAGGAGAAGGGGGCATCACAGAAATACAGCCAAAGATAGAGAGAGACATGTCGGGATGCAGCGATGGACTCACAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR CCA 90 bp | ATTTCTGTGATGCCCCCTTCTCCTGGTCACAACACTTTGAAGGAATaGGTTGACAGAGCCCATCTGTTTGCTCAGTCTCTGTGTTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: ISVMPPSPGHNTLKE*VDRAHLFAQSLCFS Trigger: GGAAAAACACAGAGACTGAGCAAACAGATGGGCTCTGTCAACCCATTCCTTCAAAGTGTTGTGACCAGGAGAAGGGGGCATCACAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR TCA 90 bp | CAGGAGAAAATATACTGCAATTCAGAAGGTTGGACCTCAGCTTCATaGTTGCTTTCCTCTCATTTGATCAAGTGGGTGTCTGGCCATGTC | + |
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Preference number: 1 (lower is better) Translates to: QEKIYCNSEGWTSAS*LLSSHLIKWVSGHV Trigger: GACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCATGAAGCTGAGGTCCAACCTTCTGAATTGCAGTATATTTTCTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR GCA 90 bp | GCCACGCTTCAGAAACATCTTCTCATCAAATCCACTGAACTTTATTaGTTCTTCCACGCCAACATCCAGAATAGACTTGGAAGGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: ATLQKHLLIKSTELY*FFHANIQNRLGRVL Trigger: AAGGACCCTTCCAAGTCTATTCTGGATGTTGGCGTGGAAGAAGCAATAAAGTTCAGTGGATTTGATGAGAAGATGTTTCTGAAGCGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR TCA 90 bp | AGAACACAGTGTAATTCCACAGAGAGATACATATACATATATCCCTaGGCATTAGACCTCATCTGGACATACTCACATGAGGCCTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: RTQCNSTERYIYIYP*ALDLIWTYSHEACV Trigger: CACGCAGGCCTCATGTGAGTATGTCCAGATGAGGTCTAATGCTCAGGGATATATGTATATGTATCTCTCTGTGGAATTACACTGTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR CCA 90 bp | AGTAAAACCCCCTTCACAGCATTACTACTCTGCATCAATCAGTCATaGGACACAAGGCATCAGCCTGTAACACTTAACAAATGTCCACTA | + |
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Preference number: 1 (lower is better) Translates to: SKTPFTALLLCINQS*DTRHQPVTLNKCPL Trigger: TAGTGGACATTTGTTAAGTGTTACAGGCTGATGCCTTGTGTCCCATGACTGATTGATGCAGAGTAGTAATGCTGTGAAGGGGGTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR TCA 90 bp | TTCATCTTCTGGTTAGATTCAGGCACCAAACAGGACACCTCTTTGTaGCGCTCCAAGAATGTTTCAAATTCTTCATTGCTTATAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: FIFWLDSGTKQDTSL*RSKNVSNSSLLIRN Trigger: ATTTCTTATAAGCAATGAAGAATTTGAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAACCAGAAGATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAGGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGAGCAATCCCTAGCACTTaGGAGGGTGAGGTTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: MPGQLQLQKWHPHGHTLGAIPST*EGEVRA Trigger: TGCCCTAACCTCACCCTCTCAAGTGCTAGGGATTGC...TCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCCTGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | CAACATCAATCCATCAAGAGGGCAGTCCATGAGCTGAGTTACTGCGGTAAGGAGGGGCAGTCCATGAGCTaGGTTACTGCGGTAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: QHQSIKRAVHELSYCGKEGQSMS*VTAVRS Trigger: GCTCCTTACCGCAGTAACTCAGCTCATGGACTGCCC...CTCCTTACCGCAGTAACTCAGCTCATGGACTGCCCTCTTGATGGATTGATGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAGATACTTAATGAGGTCTGACTTCCCGGGGCCCTCTAGCGGCCACAGTTTGGCTGTATTTCTGTaGTGCCCCCTTCTCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: FLRYLMRSDFPGPSSGHSLAVFL*CPLLLV Trigger: GACCAGGAGAAGGGGGCATCACAGAAATACAGCCAA...ACTGTGGCCGCTAGAGGGCCCCGGGAAGTCAGACCTCATTAAGTATCTCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGAGGTAAAGGAGGGTGTGTTTTGTaGAGTTTCCTGTTGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GQLQLQKWHPHGHTLGGKGGCVL*SFLLTK Trigger: TTTTGTCAACAGGAAACTTCACAAAACACACCCTCC...TTTACCTCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGCAATGCCAGGGCAGTTaGAGCTGCAGAAGTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGQCQGS*SCRSGI Trigger: GATGCCACTTCTGCAGCTGCAACTGCCCTGGCATTG...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGGACCTTGCTCCTCTGAGAACCGAACTCTCTCCTGTGGAGGACGATTACCACCTTGTAATCCCTaGACCACCTCCTCAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VTGPCSSENRTLSCGGRLPPCNP*TTSSAF Trigger: AAAAGCTGAGGAGGTGGTGCAGGGATTACAAGGTGG...TAATCGTCCTCCACAGGAGAGAGTTCGGTTCTCAGAGGAGCAAGGTCCAGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCATCCTCATGGCCACACCCTGGGAGGTAAAGTGTACCTTGGCTTTGTCAGAATGTCCCTGTAGCTaGTCGGAGTTTCCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: SGILMATPWEVKCTLALSECPCS*SEFPSH Trigger: ATGGGAAGGAAACTCCGACCAGCTACAGGGACATTC...TGACAAAGCCAAGGTACACTTTACCTCCCAGGGTGTGGCCATGAGGATGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAGATACTTAATGAGGTCTGACTTCCCGGGGCCCTCTAGCGGCCACAGTCAGGACACCTCTTTGTaGCGCTCCAAGAATGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FLRYLMRSDFPGPSSGHSQDTSL*RSKNVS Trigger: TGAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTG...ACTGTGGCCGCTAGAGGGCCCCGGGAAGTCAGACCTCATTAAGTATCTCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | CAACATCAATCCATCAAGAGGGCAGTCCATGAGCTGAGTTACTGCGGTAAGGAGTCAGGGAAAGAGACATaGAGCTTCCCTCAGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QHQSIKRAVHELSYCGKESGKET*SFPQPG Trigger: TCCTGGCTGAGGGAAGCTGCATGTCTCTTTCCCTGA...CTCCTTACCGCAGTAACTCAGCTCATGGACTGCCCTCTTGATGGATTGATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR CAA 90 bp | ATTAGGAGGCACTGGAAAACCTTCCAGCGCACAGGGCTCAGGGCCTaGATGTGTTCATTCATGTCTTCGTCCACGTTGAAGCGATTAATG | + |
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Preference number: 2 (lower is better) Translates to: IRRHWKTFQRTGLRA*MCSFMSSSTLKRLM Trigger: CATTAATCGCTTCAACGTGGACGAAGACATGAATGAACACATCAAGGCCCTGAGCCCTGTGCGCTGGAAGGTTTTCCAGTGCCTCCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR CAA 90 bp | CCACTGAACTTTATTGCTTCTTCCACGCCAACATCCAGAATAGACTaGGAAGGGTCCTTCCGGCCACCGGTACAGTTCAGAAAGCGCATA | + |
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Preference number: 2 (lower is better) Translates to: PLNFIASSTPTSRID*EGSFRPPVQFRKRI Trigger: TATGCGCTTTCTGAACTGTACCGGTGGCCGGAAGGACCCTTCCAAGTCTATTCTGGATGTTGGCGTGGAAGAAGCAATAAAGTTCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | GTTAGATTCAGGCACCAAACAGGACACCTCTTTGTGACGCTCCAAGAATGTTTCGCTGCTGCTCCAGCTTaGGTCAGCACAGTGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: VRFRHQTGHLFVTLQECFAAAPA*VSTVSD Trigger: ATCACTCACTGTGCTGACTCAAGCTGGAGCAGCAGC...GAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGACCCCCACGACTCTTCTaGACGTGCCACATGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: CYHTLERCLRTQCNSTERPPRLF*TCHMAL Trigger: CAAGGCCATGTGGCACGTCCAGAAGAGTCGTGGGGG...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGTCTGGCCATGTCCTCTaGGATTTCCCAGGTGAACTA | + |
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Preference number: 2 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGSGHVL*DFPGEL Trigger: TAGTTCACCTGGGAAATCCCAGAGGACATGGCCAGA...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGGATGCCCCCTTCTCCTaGTCACAACACTTTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGDAPFS*SQHFEG Trigger: TCCTTCAAAGTGTTGTGACCAGGAGAAGGGGGCATC...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | GTCACTGGACCTTGCTCCTCTGAGAACCGAACTCTCTCCTGTGGAGGACGATTATCCAAATACTCCCCTTaGCTGTTAGGCAAGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: VTGPCSSENRTLSCGGRLSKYSP*LLGKNS Trigger: ACTGTTCTTGCCTAACAGCCAAGGGGAGTATTTGGA...TAATCGTCCTCCACAGGAGAGAGTTCGGTTCTCAGAGGAGCAAGGTCCAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGAGAGGGTGAGGTTAGGGCAGAGGTATCATGAGTTCCAGGCCAGCCTGCACATTTTATATTCCTaGAAGACTCCTTCCTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: ALERVRLGQRYHEFQASLHILYS*KTPSCL Trigger: TAGACAGGAAGGAGTCTTTCAGGAATATAAAATGTG...CAGGCTGGCCTGGAACTCATGATACCTCTGCCCTAACCTCACCCTCTCAAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGAGGGCAGTCCATGAGCTaGGTTACTGCGGTAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: CYHTLERCLRTQCNSTERGQSMS*VTAVRS Trigger: GCTCCTTACCGCAGTAACTCAGCTCATGGACTGCCC...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | GCACTTGAGAGGGTGAGGTTAGGGCAGAGGTATCATGAGTTCCAGGCCAGCCTGAGGCTCTATGAGATATaGCTTGATTCTACACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: ALERVRLGQRYHEFQASLRLYEI*LDSTLL Trigger: CAAAAGTGTAGAATCAAGGCATATCTCATAGAGCCT...CAGGCTGGCCTGGAACTCATGATACCTCTGCCCTAACCTCACCCTCTCAAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGACTCAAGCAGCCTCAATaGCAGGGCAGTTGCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: CYHTLERCLRTQCNSTERLKQPQ*QGSCSC Trigger: GCAGCTGCAACTGCCCTGGCATTGAGGCTGCTTGAG...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | GTCGCCTGTTTATCTATGCAACCATTAGACTCCAAACTCCAAACAGATCGAAACCTCAAGCAGCCTCAATaGCAGGGCAGTTGCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VACLSMQPLDSKLQTDRNLKQPQ*QGSCSC Trigger: GCAGCTGCAACTGCCCTGGCATTGAGGCTGCTTGAG...GTTTCGATCTGTTTGGAGTTTGGAGTCTAATGGTTGCATAGATAAACAGGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTCAGAAAAGTGTGACAACCTTTCAGCATGAGAGACTCAAGCAGCCTCAACGACTCTTCTGGACGTaGCACATGGCCTTGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: AFQKSVTTFQHERLKQPQRLFWT*HMALEL Trigger: AAGCTCCAAGGCCATGTGGCACGTCCAGAAGAGTCG...TTGAGGCTGCTTGAGTCTCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGAGATACTTAATGAGGTCTGACTTCCCGGGGCCCTCTAGCGGCCACAGTGGCTTAATAACCTCATaGAATGCTTCCACAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: FLRYLMRSDFPGPSSGHSGLITS*NASTGR Trigger: TCTTCCTGTGGAAGCATTGCATGAGGTTATTAAGCC...ACTGTGGCCGCTAGAGGGCCCCGGGAAGTCAGACCTCATTAAGTATCTCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGAGGTAAATGTCTTTTGCCTTTTTaGTGTAAAGAAGGAACTGTT | + |
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Preference number: 2 (lower is better) Translates to: GQLQLQKWHPHGHTLGGKCLLPF*CKEGTV Trigger: AACAGTTCCTTCTTTACACCAAAAAGGCAAAAGACA...TTTACCTCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | CAACATCAATCCATCAAGAGGGCAGTCCATGAGCTGAGTTACTGCGGTAAGGAGTCAATTAGGAGGCACTaGAAAACCTTCCAGCGCACA | + |
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Preference number: 2 (lower is better) Translates to: QHQSIKRAVHELSYCGKESIRRH*KTFQRT Trigger: TGTGCGCTGGAAGGTTTTCCAGTGCCTCCTAATTGA...CTCCTTACCGCAGTAACTCAGCTCATGGACTGCCCTCTTGATGGATTGATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR CAA 90 bp | TGGGAGGTAAAGTGTACCTTGGCTTTGTCAAGAACCCTGAAGGAATaGCTGCAGTATAAAGCAGCCATCTTGAAGCAGCAGCATCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WEVKCTLALSRTLKE*LQYKAAILKQQHQR Trigger: CCTCTGATGCTGCTGCTTCAAGATGGCTGCTTTATACTGCAGCAATTCCTTCAGGGTTCTTGACAAAGCCAAGGTACACTTTACCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGTGGACCTCAGCTTCATaGTTGCTTTCCTCTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGWTSAS*LLSSHL Trigger: CAAATGAGAGGAAAGCAATCATGAAGCTGAGGTCCA...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCATCATGTTCTACTTTAATCAGGGAAAGAGACATGCAGCTTCCCTCAGCCGACTCTTCTGGACGTaGCACATGGCCTTGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: ILIMFYFNQGKRHAASLSRLFWT*HMALEL Trigger: AAGCTCCAAGGCCATGTGGCACGTCCAGAAGAGTCG...GCTGAGGGAAGCTGCATGTCTCTTTCCCTGATTAAAGTAGAACATGATGAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | GTTAGATTCAGGCACCAAACAGGACACCTCTTTGTGACGCTCCAAGAATGTTTCTGTAAGCTCCAGCCATaGGGTCATGTGTCAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: VRFRHQTGHLFVTLQECFCKLQP*GHVSGL Trigger: CAATCCTGACACATGACCCCATGGCTGGAGCTTACA...GAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGACGTGCCACATGGCCTTGGAGCTTTTCAGAAAAGTGTGACAACCTTTCAGAACACTTTGAAGGAATaGGTTGACAGAGCCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: LDVPHGLGAFQKSVTTFQNTLKE*VDRAHL Trigger: CAGATGGGCTCTGTCAACCCATTCCTTCAAAGTGTT...CTGAAAGGTTGTCACACTTTTCTGAAAAGCTCCAAGGCCATGTGGCACGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAGATACTTAATGAGGTCTGACTTCCCGGGGCCCTCTAGCGGCCACAGTTTGTTTTTCTCATGTTaGCCTAGACTAGGTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: FLRYLMRSDFPGPSSGHSLFFSC*PRLGQV Trigger: AACTTGACCTAGTCTAGGTCAACATGAGAAAAACAA...ACTGTGGCCGCTAGAGGGCCCCGGGAAGTCAGACCTCATTAAGTATCTCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR GCA 90 bp | CCTTGTAATCCCTGCACCACCTCCTCAGCTTTTGAAGGTTTTCCACATGGTTCTCAGAGCCCATCTGTTTaGTCAGTCTCTGTGTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PCNPCTTSSAFEGFPHGSQSPSV*SVSVFF Trigger: GAAAAACACAGAGACTGAGCAAACAGATGGGCTCTG...AGAACCATGTGGAAAACCTTCAAAAGCTGAGGAGGTGGTGCAGGGATTACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR CAA 90 bp | GTGAGTGATGTGTGTAAGCTCCAGCCATGGGGTCATGTGTCAGGATaGTGTAAATATAAGTGGGATGTGTTTGGCGATATTGTTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: VSDVCKLQPWGHVSG*CKYKWDVFGDIVGI Trigger: GATCCCAACAATATCGCCAAACACATCCCACTTATATTTACACAATCCTGACACATGACCCCATGGCTGGAGCTTACACACATCACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTCAGAAAAGTGTGACAACCTTTCAGCATGAGAGACTCAAGCAGCCTCAAGAAGATGTAGCTTGTTaGAGGATAGCTGGGCGTGAA | + |
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Preference number: 2 (lower is better) Translates to: AFQKSVTTFQHERLKQPQEDVAC*RIAGRE Trigger: TTCACGCCCAGCTATCCTTCAACAAGCTACATCTTC...TTGAGGCTGCTTGAGTCTCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR-3UTR TCA 90 bp | CAACATCAATCCATCAAGAGGGCAGTCCATGAGCTGAGTTACTGCGGTAAGGAGATCTGCTTCACAAAATaGGCACCCAGATTTAACACT | + |
|
Preference number: 2 (lower is better) Translates to: QHQSIKRAVHELSYCGKEICFTK*APRFNT Trigger: AGTGTTAAATCTGGGTGCTCATTTTGTGAAGCAGAT...CTCCTTACCGCAGTAACTCAGCTCATGGACTGCCCTCTTGATGGATTGATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | GTCGCCTGTTTATCTATGCAACCATTAGACTCCAAACTCCAAACAGATCGAAACGTTAGGCAAGAACAGTaGGCATCTGTGAGTCCATCG | + |
|
Preference number: 2 (lower is better) Translates to: VACLSMQPLDSKLQTDRNVRQEQ*ASVSPS Trigger: CGATGGACTCACAGATGCTCACTGTTCTTGCCTAAC...GTTTCGATCTGTTTGGAGTTTGGAGTCTAATGGTTGCATAGATAAACAGGCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR GCA 90 bp | ATGATTGCTTTCCTCTCATTTGATCAAGTGGGTGTCTGGCCATGTCCTCTGGGAGGCTTAATAACCTCATaGAATGCTTCCACAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: MIAFLSFDQVGVWPCPLGGLITS*NASTGR Trigger: TCTTCCTGTGGAAGCATTGCATGAGGTTATTAAGCC...TCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR GCA 90 bp | CTGGACGTGCCACATGGCCTTGGAGCTTTTCAGAAAAGTGTGACAACCTTTCAGTATAAGAAATCTTTCTaGTTCCCTCAGGGCATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LDVPHGLGAFQKSVTTFQYKKSF*FPQGIF Trigger: GAAGATGCCCTGAGGGAAGCAGAAAGATTTCTTATA...CTGAAAGGTTGTCACACTTTTCTGAAAAGCTCCAAGGCCATGTGGCACGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR CAA 90 bp | TGCAGCTTCCCTCAGCCAGGAGAAAATATACTGCAATTCAGAAGGTaGGACCTCAGCTTCATGATTGCTTTCCTCTCATTTGATCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: CSFPQPGENILQFRR*DLSFMIAFLSFDQV Trigger: CACTTGATCAAATGAGAGGAAAGCAATCATGAAGCTGAGGTCCAACCTTCTGAATTGCAGTATATTTTCTCCTGGCTGAGGGAAGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCTGTGGAGGACGATTATCTGCTGCATAATTTTACTCCCTTTTTAGTTCAGATAAAGCAGCCATCTTaGAGCAGCAGCATCAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPVEDDYLLHNFTPFLVQIKQPS*SSSIRG Trigger: GCCTCTGATGCTGCTGCTTCAAGATGGCTGCTTTAT...CTGAACTAAAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCTCCACAGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | CTGAAGGAATTGCTGCAGTATAAAGCAGCCATCTTGAAGCAGCAGCATCAGAGGCTTTTCAGAAAAGTGTaGCAACCTTTCAGCATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LKELLQYKAAILKQQHQRLFRKV*QPFSMR Trigger: TCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAG...CCTCTGATGCTGCTGCTTCAAGATGGCTGCTTTATACTGCAGCAATTCCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGATCTCATTTGATCAAGTaGGTGTCTGGCCATGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: CYHTLERCLRTQCNSTERSHLIK*VSGHVL Trigger: GAGGACATGGCCAGACACCCACTTGATCAAATGAGA...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR GCA 90 bp | CAACATCAATCCATCAAGAGGGCAGTCCATGAGCTGAGTTACTGCGGTAAGGAGAGGACGATTATCTGCTaGATAATTTTACTCCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: QHQSIKRAVHELSYCGKERTIIC*IILLPF Trigger: AAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCT...CTCCTTACCGCAGTAACTCAGCTCATGGACTGCCCTCTTGATGGATTGATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGATCAAGTGGGTGTCTaGCCATGTCCTCTGGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKDQVGV*PCPLGF Trigger: AAATCCCAGAGGACATGGCCAGACACCCACTTGATC...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGAAGATGTAGCTTGTTaGAGGATAGCTGGGCGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKEDVAC*RIAGRE Trigger: TTCACGCCCAGCTATCCTTCAACAAGCTACATCTTC...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGTTTGAAGGAATGGGTTaGCAGAGCCCATCTGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKFEGMG*QSPSVC Trigger: GCAAACAGATGGGCTCTGTCAACCCATTCCTTCAAA...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTCAGAAAAGTGTGACAACCTTTCAGCATGAGAGACTCAAGCAGCCTCAATCCACAGGAAGATTTTaGCTAGTTCACATTCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: AFQKSVTTFQHERLKQPQSTGRF*LVHILS Trigger: AGACAGAATGTGAACTAGCCAAAATCTTCCTGTGGA...TTGAGGCTGCTTGAGTCTCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGTTTGGCGATATTGTTaGGATCCCAGTAGCTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKVWRYC*DPSSSA Trigger: TGCAGAGCTACTGGGATCCCAACAATATCGCCAAAC...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | ATGATTGCTTTCCTCTCATTTGATCAAGTGGGTGTCTGGCCATGTCCTCTGGGAGACCAGAGATTCTCATaGTGTACTGTGTTTTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: MIAFLSFDQVGVWPCPLGDQRFS*CTVFYF Trigger: AAAATAAAACACAGTACACCATGAGAATCTCTGGTC...TCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATAATAAAGCAGCCATCTTaGAGCAGCAGCATCAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KRPSYKNTAHDFIIEHIIIKQPS*SSSIRG Trigger: GCCTCTGATGCTGCTGCTTCAAGATGGCTGCTTTAT...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATACTTGAGTCAGCACAGTaGGTGATGTGTGTAAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KRPSYKNTAHDFIIEHIILESAQ*VMCVSS Trigger: GGAGCTTACACACATCACTCACTGTGCTGACTCAAG...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATAGAATGTCCCTGTAGCTaGTCGGAGTTTCCTTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KRPSYKNTAHDFIIEHIIECPCS*SEFPSH Trigger: ATGGGAAGGAAACTCCGACCAGCTACAGGGACATTC...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGAGAGTCTTTCATCTTCTaGTTAGATTCAGGCACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CYHTLERCLRTQCNSTERESFIF*LDSGTK Trigger: TTTGGTGCCTGAATCTAACCAGAAGATGAAAGACTC...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR CAA 90 bp | CTGTCTAGGCTTAATAACCTCATGCAATGCTTCCACAGGAAGATTTaGGCTAGTTCACATTCTGTCTTTTGCCTTTTTGGTGTAAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSRLNNLMQCFHRKI*ASSHSVFCLFGVKK Trigger: CTTCTTTACACCAAAAAGGCAAAAGACAGAATGTGAACTAGCCAAAATCTTCCTGTGGAAGCATTGCATGAGGTTATTAAGCCTAGACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCTGTGGAGGACGATTATCTGCTGCATAATTTTACTCCCTTTTTAGTTCAGCTTTTCAGAAAAGTGTaGCAACCTTTCAGCATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPVEDDYLLHNFTPFLVQLFRKV*QPFSMR Trigger: TCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAG...CTGAACTAAAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCTCCACAGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTCATCATGTTCTACTTTAATCAGGGAAAGAGACATGCAGCTTCCCTCAGCCACATTTTATATTCCTaGAAGACTCCTTCCTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ILIMFYFNQGKRHAASLSHILYS*KTPSCL Trigger: TAGACAGGAAGGAGTCTTTCAGGAATATAAAATGTG...GCTGAGGGAAGCTGCATGTCTCTTTCCCTGATTAAAGTAGAACATGATGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTTCAGAAAAGTGTGACAACCTTTCAGCATGAGAGACTCAAGCAGCCTCAAAGGACGATTATCTGCTaGATAATTTTACTCCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: AFQKSVTTFQHERLKQPQRTIIC*IILLPF Trigger: AAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCT...TTGAGGCTGCTTGAGTCTCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR GCA 90 bp | GTCGCCTGTTTATCTATGCAACCATTAGACTCCAAACTCCAAACAGATCGAAACAGGCTCTATGAGATATaGCTTGATTCTACACTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VACLSMQPLDSKLQTDRNRLYEI*LDSTLL Trigger: CAAAAGTGTAGAATCAAGGCATATCTCATAGAGCCT...GTTTCGATCTGTTTGGAGTTTGGAGTCTAATGGTTGCATAGATAAACAGGCGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTCAGAAAAGTGTGACAACCTTTCAGCATGAGAGACTCAAGCAGCCTCAATGTCTTTTGCCTTTTTaGTGTAAAGAAGGAACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: AFQKSVTTFQHERLKQPQCLLPF*CKEGTV Trigger: AACAGTTCCTTCTTTACACCAAAAAGGCAAAAGACA...TTGAGGCTGCTTGAGTCTCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATACAGGAGAAAATATACTaGAATTCAGAAGGTTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: KRPSYKNTAHDFIIEHIIQEKIY*NSEGWT Trigger: GGTCCAACCTTCTGAATTGCAGTATATTTTCTCCTG...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATATTGTTTTTCTCATGTTaGCCTAGACTAGGTCAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KRPSYKNTAHDFIIEHIILFFSC*PRLGQV Trigger: AACTTGACCTAGTCTAGGTCAACATGAGAAAAACAA...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR GCA 72 bp | AGACTCAAGCAGCCTCAATGCCAGGGCAGTTGCAGCTaGAGAAGTGGCATCCTCATGGCCACACCCTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLKQPQCQGSCS*RSGILMATPWE Trigger: CTCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCCTGGCATTGAGGCTGCTTGAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | GCAGCCTCAATGCCAGGGCAGTTGCAGCTGCAGAAGTaGCATCCTCATGGCCACACCCTGGGAGGTAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AASMPGQLQLQK*HPHGHTLGGKV Trigger: CACTTTACCTCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCCTGGCATTGAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | CTGCTGCTGCTGCTGCTCCAGCTTGAGTCAGCACAGTaGGTGATGTGTGTAAGCTCCAGCCATGGGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LLLLLLQLESAQ*VMCVSSSHGVM Trigger: CATGACCCCATGGCTGGAGCTTACACACATCACTCACTGTGCTGACTCAAGCTGGAGCAGCAGCAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | TCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCAGCTTaGGTCAGCACAGTGAGTGATGTGTGTAAGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SAAAAAAAAAPA*VSTVSDVCKLQ Trigger: CTGGAGCTTACACACATCACTCACTGTGCTGACTCAAGCTGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGAGGTAAATATAAAGCAGCCATCTaGAAGCAGCAGCATCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GQLQLQKWHPHGHTLGGKYKAAI*KQQHQR Trigger: CCTCTGATGCTGCTGCTTCAAGATGGCTGCTTTATA...TTTACCTCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR GCA 72 bp | ACAACCTTTCAGCATGAGAGACTCAAGCAGCCTCAATaGCAGGGCAGTTGCAGCTGCAGAAGTGGCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TTFQHERLKQPQ*QGSCSCRSGIL Trigger: GAGGATGCCACTTCTGCAGCTGCAACTGCCCTGGCATTGAGGCTGCTTGAGTCTCTCATGCTGAAAGGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | TGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTaGGAGGTAAAGTGTACCTTGGCTTTGTCAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: CSCRSGILMATP*EVKCTLALSRT Trigger: GGTTCTTGACAAAGCCAAGGTACACTTTACCTCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | TCCCCTTGGCTGTTAGGCAAGAACAGTGAGCATCTGTaGGTCCATCGCTGCATCCCGACATGTCTCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SPWLLGKNSEHL*VHRCIPTCLSL Trigger: TAGAGAGAGACATGTCGGGATGCAGCGATGGACTCACAGATGCTCACTGTTCTTGCCTAACAGCCAAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | GTCCAAATACTCCCCTTGGCTGTTAGGCAAGAACAGTaGGCATCTGTGAGTCCATCGCTGCATCCCGACATG | + |
|
Preference number: 3 (lower is better) Translates to: VQILPLAVRQEQ*ASVSPSLHPDM Trigger: CATGTCGGGATGCAGCGATGGACTCACAGATGCTCACTGTTCTTGCCTAACAGCCAAGGGGAGTATTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGAGGTAAATTCCACAGGAAGATTTaGGCTAGTTCACATTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GQLQLQKWHPHGHTLGGKFHRKI*ASSHSV Trigger: GACAGAATGTGAACTAGCCAAAATCTTCCTGTGGAA...TTTACCTCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | GTCACTGGACCTTGCTCCTCTGAGAACCGAACTCTCTCCTGTGGAGGACGATTATATAAAGCAGCCATCTaGAAGCAGCAGCATCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTGPCSSENRTLSCGGRLYKAAI*KQQHQR Trigger: CCTCTGATGCTGCTGCTTCAAGATGGCTGCTTTATA...TAATCGTCCTCCACAGGAGAGAGTTCGGTTCTCAGAGGAGCAAGGTCCAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | ATGCCCCCTTCTCCTGGTCACAACACTTTGAAGGAATaGGTTGACAGAGCCCATCTGTTTGCTCAGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MPPSPGHNTLKE*VDRAHLFAQSL Trigger: CAGAGACTGAGCAAACAGATGGGCTCTGTCAACCCATTCCTTCAAAGTGTTGTGACCAGGAGAAGGGGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGAGATACTTAATGAGGTCTGACTTCCCGGGGCCCTCTAGCGGCCACAGTAAGTGTACCTTGGCTTaGTCAAGAACCCTGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLRYLMRSDFPGPSSGHSKCTLA*SRTLKE Trigger: TTCCTTCAGGGTTCTTGACAAAGCCAAGGTACACTT...ACTGTGGCCGCTAGAGGGCCCCGGGAAGTCAGACCTCATTAAGTATCTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | ACGTGCCACATGGCCTTGGAGCTTTTCAGAAAAGTGTaGCAACCTTTCAGCATGAGAGACTCAAGCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TCHMALELFRKV*QPFSMRDSSSL Trigger: GAGGCTGCTTGAGTCTCTCATGCTGAAAGGTTGTCACACTTTTCTGAAAAGCTCCAAGGCCATGTGGCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | TCTCATTTGATCAAGTGGGTGTCTGGCCATGTCCTCTaGGATTTCCCAGGTGAACTAAGCACACAGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: SHLIKWVSGHVL*DFPGELSTQDL Trigger: TAAGTCCTGTGTGCTTAGTTCACCTGGGAAATCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGATTGCTTTCCTCTCATTTGATCAAGTGGGTGTCTGGCCATGTCCTCTGGGAGAGGTAAAGTGTACCTaGGCTTTGTCAAGAACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: MIAFLSFDQVGVWPCPLGEVKCT*ALSRTL Trigger: CAGGGTTCTTGACAAAGCCAAGGTACACTTTACCTC...TCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | GTCGCCTGTTTATCTATGCAACCATTAGACTCCAAACTCCAAACAGATCGAAACTCAATGCCAGGGCAGTaGCAGCTGCAGAAGTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VACLSMQPLDSKLQTDRNSMPGQ*QLQKWH Trigger: ATGCCACTTCTGCAGCTGCAACTGCCCTGGCATTGA...GTTTCGATCTGTTTGGAGTTTGGAGTCTAATGGTTGCATAGATAAACAGGCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACGTGCCACATGGCCTTGGAGCTTTTCAGAAAAGTGTGACAACCTTTCAGACAGAGCCCATCTGTTaGCTCAGTCTCTGTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LDVPHGLGAFQKSVTTFQTEPIC*LSLCVF Trigger: AAAAACACAGAGACTGAGCAAACAGATGGGCTCTGT...CTGAAAGGTTGTCACACTTTTCTGAAAAGCTCCAAGGCCATGTGGCACGTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | CCACGCTTCAGAAACATCTTCTCATCAAATCCACTGAACTTTATTGCTTCTTCCTCAATGCCAGGGCAGTaGCAGCTGCAGAAGTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PRFRNIFSSNPLNFIASSSMPGQ*QLQKWH Trigger: ATGCCACTTCTGCAGCTGCAACTGCCCTGGCATTGA...GGAAGAAGCAATAAAGTTCAGTGGATTTGATGAGAAGATGTTTCTGAAGCGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGATTCAGGCACCAAACAGGACACCTCTTTGTGACGCTCCAAGAATGTTTCCCTGGTCACAACACTTaGAAGGAATGGGTTGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: VRFRHQTGHLFVTLQECFPGHNT*KEWVDR Trigger: TCTGTCAACCCATTCCTTCAAAGTGTTGTGACCAGG...GAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACGTGCCACATGGCCTTGGAGCTTTTCAGAAAAGTGTGACAACCTTTCAGCGATTAATGACAGAGTaGATCTTGAAAGCCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LDVPHGLGAFQKSVTTFQRLMTE*ILKATL Trigger: CAAGGTGGCTTTCAAGATCAACTCTGTCATTAATCG...CTGAAAGGTTGTCACACTTTTCTGAAAAGCTCCAAGGCCATGTGGCACGTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAGGAATTGCTGCAGTATAAAGCAGCCATCTTGAAGCAGCAGCATCAGAGGATGTCTTCGTCCACGTaGAAGCGATTAATGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKELLQYKAAILKQQHQRMSSST*KRLMTE Trigger: CTCTGTCATTAATCGCTTCAACGTGGACGAAGACAT...CCTCTGATGCTGCTGCTTCAAGATGGCTGCTTTATACTGCAGCAATTCCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGAACATCCAGAATAGACTaGGAAGGGTCCTTCCGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CYHTLERCLRTQCNSTERTSRID*EGSFRP Trigger: TGGCCGGAAGGACCCTTCCAAGTCTATTCTGGATGT...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | GTCAGCACAGTGAGTGATGTGTGTAAGCTCCAGCCATaGGGTCATGTGTCAGGATTGTGTAAATATAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSTVSDVCKLQP*GHVSGLCKYKW Trigger: CCACTTATATTTACACAATCCTGACACATGACCCCATGGCTGGAGCTTACACACATCACTCACTGTGCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGGGTCATGTGTCAGGATaGTGTAAATATAAGTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGGHVSG*CKYKWD Trigger: ATCCCACTTATATTTACACAATCCTGACACATGACC...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGACCACCTCCTCAGCTTTaGAAGGTTTTCCACATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CYHTLERCLRTQCNSTERPPPQL*KVFHMV Trigger: AACCATGTGGAAAACCTTCAAAAGCTGAGGAGGTGG...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | CCCTTCACAGCATTACTACTCTGCATCAATCAGTCATaGGACACAAGGCATCAGCCTGTAACACTTAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: PFTALLLCINQS*DTRHQPVTLNK Trigger: TTTGTTAAGTGTTACAGGCTGATGCCTTGTGTCCCATGACTGATTGATGCAGAGTAGTAATGCTGTGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | CCATGGGGTCATGTGTCAGGATTGTGTAAATATAAGTaGGATGTGTTTGGCGATATTGTTGGGATCCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PWGHVSGLCKYK*DVFGDIVGIPV Trigger: TACTGGGATCCCAACAATATCGCCAAACACATCCCACTTATATTTACACAATCCTGACACATGACCCCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | GGCCTGCGTGATGGTTCTTTGTCTAATAATAGCTTATaGAACAACATCAATCCATCAAGAGGGCAGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GLRDGSLSNNSL*NNINPSRGQSM Trigger: CATGGACTGCCCTCTTGATGGATTGATGTTGTTTCATAAGCTATTATTAGACAAAGAACCATCACGCAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTGTGGAGGACGATTATCTGCTGCATAATTTTACTCCCTTTTTAGTTCAGAAGTGTACCTTGGCTTaGTCAAGAACCCTGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPVEDDYLLHNFTPFLVQKCTLA*SRTLKE Trigger: TTCCTTCAGGGTTCTTGACAAAGCCAAGGTACACTT...CTGAACTAAAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCTCCACAGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | ATATACTGCAATTCAGAAGGTTGGACCTCAGCTTCATaGTTGCTTTCCTCTCATTTGATCAAGTGGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IYCNSEGWTSAS*LLSSHLIKWVS Trigger: AGACACCCACTTGATCAAATGAGAGGAAAGCAATCATGAAGCTGAGGTCCAACCTTCTGAATTGCAGTATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | CCTATTCTCCCAGCAGAGAGCATCTGCTTCACAAAATaGGCACCCAGATTTAACACTGAAAATGTAACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PILPAESICFTK*APRFNTENVTN Trigger: ATTGGTTACATTTTCAGTGTTAAATCTGGGTGCTCATTTTGTGAAGCAGATGCTCTCTGCTGGGAGAATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR TCA 72 bp | TGGTTAGATTCAGGCACCAAACAGGACACCTCTTTGTaGCGCTCCAAGAATGTTTCAAATTCTTCATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: WLDSGTKQDTSL*RSKNVSNSSLL Trigger: AAGCAATGAAGAATTTGAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR GCA 72 bp | GCATTAGACCTCATCTGGACATACTCACATGAGGCCTaGGTGATGGTTCTTTGTCTAATAATAGCTTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: ALDLIWTYSHEA*VMVLCLIIAYE Trigger: TTCATAAGCTATTATTAGACAAAGAACCATCACGCAGGCCTCATGTGAGTATGTCCAGATGAGGTCTAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGCTGCAATTCAGAAGGTaGGACCTCAGCTTCATGATT | + |
|
Preference number: 3 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKLQFRR*DLSFMI Trigger: AATCATGAAGCTGAGGTCCAACCTTCTGAATTGCAG...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATAGTCCAAATACTCCCCTaGGCTGTTAGGCAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: KRPSYKNTAHDFIIEHIIVQILP*AVRQEQ Trigger: CTGTTCTTGCCTAACAGCCAAGGGGAGTATTTGGAC...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATAACAGGGCTCAGGGCCTaGATGTGTTCATTCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KRPSYKNTAHDFIIEHIITGLRA*MCSFMS Trigger: AGACATGAATGAACACATCAAGGCCCTGAGCCCTGT...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR GCA 72 bp | CAGAAACATCTTCTCATCAAATCCACTGAACTTTATTaGTTCTTCCACGCCAACATCCAGAATAGACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QKHLLIKSTELY*FFHANIQNRLG Trigger: TCCAAGTCTATTCTGGATGTTGGCGTGGAAGAAGCAATAAAGTTCAGTGGATTTGATGAGAAGATGTTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| 3UTR GCA 72 bp | TTAATTCACAGATCATGTTACCATACATTAGAGCGATaGCTCAGAACACAGTGTAATTCCACAGAGAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: LIHRSCYHTLER*LRTQCNSTERY Trigger: GTATCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACATGATCTGTGAATTAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CCA 72 bp | CCAAAGCAGAAAAGCATTAGAATAGTCAGCAGTAATTaGAGGGTGTGTTTTGTGAAGTTTCCTGTTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: PKQKSIRIVSSN*RVCFVKFPVDK Trigger: TTTGTCAACAGGAAACTTCACAAAACACACCCTCCAATTACTGCTGACTATTCTAATGCTTTTCTGCTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGTCCCTCTTACAAAAACACAGCCCATGATTTTATCATTGAACACATTATATTCCACAGGAAGATTTaGGCTAGTTCACATTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KRPSYKNTAHDFIIEHIIFHRKI*ASSHSV Trigger: GACAGAATGTGAACTAGCCAAAATCTTCCTGTGGAA...TATAATGTGTTCAATGATAAAATCATGGGCTGTGTTTTTGTAAGAGGGACGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGAACGGGGGTTGTGGGCTaGGTGCTGTTCCCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPGQLQLQKWHPHGHTLGTGVVG*VLFPSS Trigger: GGAAGATGGGAACAGCACTCAGCCCACAACCCCCGT...TCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCCTGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR CCA 90 bp | GCACTTGAGAGGGTGAGGTTAGGGCAGAGGTATCATGAGTTCCAGGCCAGCCTGGAACCCAGCTGCTGCTaGAACAGGCTCAGCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALERVRLGQRYHEFQASLEPSCC*NRLSSR Trigger: TCGGCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTC...CAGGCTGGCCTGGAACTCATGATACCTCTGCCCTAACCTCACCCTCTCAAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGATGCCATTGCTCACTATaGTCACAGAGGGCAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MPGQLQLQKWHPHGHTLGCHCSL*SQRAGL Trigger: TAGCCCTGCCCTCTGTGAGCATAGTGAGCAATGGCA...TCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCCTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGATACTTAATGAGGTCTGACTTCCCGGGGCCCTCTAGCGGCCACAGTAGGGAACCCAGCTGCTaGTGGAACAGGCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRYLMRSDFPGPSSGHSREPSC*WNRLSS Trigger: GCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCCT...ACTGTGGCCGCTAGAGGGCCCCGGGAAGTCAGACCTCATTAAGTATCTCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGAGGGAACCCAGCTGCTaGTGGAACAGGCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGREPSC*WNRLSS Trigger: GCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCCT...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | GTCACTGGACCTTGCTCCTCTGAGAACCGAACTCTCTCCTGTGGAGGACGATTAGGGCTAGCTCCTCCTTaGAGAATCTCACAAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGPCSSENRTLSCGGRLGLAPP*RISQAC Trigger: GCAAGCTTGTGAGATTCTGCAAGGAGGAGCTAGCCC...TAATCGTCCTCCACAGGAGAGAGTTCGGTTCTCAGAGGAGCAAGGTCCAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CAA 72 bp | CACTGGAAAACCTTCCAGCGCACAGGGCTCAGGGCCTaGATGTGTTCATTCATGTCTTCGTCCACGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HWKTFQRTGLRA*MCSFMSSSTLK Trigger: CTTCAACGTGGACGAAGACATGAATGAACACATCAAGGCCCTGAGCCCTGTGCGCTGGAAGGTTTTCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| CDS-3UTR TCA 90 bp | GTTAGATTCAGGCACCAAACAGGACACCTCTTTGTGACGCTCCAAGAATGTTTCACGGGGGTTGTGGGCTaGGTGCTGTTCCCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRFRHQTGHLFVTLQECFTGVVG*VLFPSS Trigger: GGAAGATGGGAACAGCACTCAGCCCACAACCCCCGT...GAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGGGCAGTTGCAGCTGCAGAAGTGGCATCCTCATGGCCACACCCTGGGATATAAGAAATCTTTCTaGTTCCCTCAGGGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPGQLQLQKWHPHGHTLGYKKSF*FPQGIF Trigger: GAAGATGCCCTGAGGGAAGCAGAAAGATTTCTTATA...TCCCAGGGTGTGGCCATGAGGATGCCACTTCTGCAGCTGCAACTGCCCTGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
||
| CDS-3UTR TCA 90 bp | GTTGACAGAGCCCATCTGTTTGCTCAGTCTCTGTGTTTTTCCAGAAGACCAGAGCCAAACCAGCCTGTTTaGGCAGAAGCAGTCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VDRAHLFAQSLCFSRRPEPNQPV*AEAVLA Trigger: AGCGAGGACTGCTTCTGCTCAAACAGGCTGGTTTGG...CTCTGGTCTTCTGGAAAAACACAGAGACTGAGCAAACAGATGGGCTCTGTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| CDS-3UTR CCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGAGCCAGCAGAACAGGATaGCCAGGCCACTCCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CYHTLERCLRTQCNSTERASRTG*PGHSRG Trigger: CCCTCTGGAGTGGCCTGGCCATCCTGTTCTGCTGGC...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGATACTTAATGAGGTCTGACTTCCCGGGGCCCTCTAGCGGCCACAGTGATGTCTTGGCTGTGTaGAAGCAGAAGCCACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRYLMRSDFPGPSSGHSDVLAV*KQKPHL Trigger: CAAATGTGGCTTCTGCTTCCACACAGCCAAGACATC...ACTGTGGCCGCTAGAGGGCCCCGGGAAGTCAGACCTCATTAAGTATCTCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CAA 72 bp | ATCCTCATGGCCACACCCTGGGAGGTAAAGTGTACCTaGGCTTTGTCAAGAACCCTGAAGGAATTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILMATPWEVKCT*ALSRTLKELLQ Trigger: CTGCAGCAATTCCTTCAGGGTTCTTGACAAAGCCAAGGTACACTTTACCTCCCAGGGTGTGGCCATGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | ATTCTCATCATGTTCTACTTTAATCAGGGAAAGAGACATGCAGCTTCCCTCAGCCAGAGGGAACCCAGCTaGTGCTGGAACAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILIMFYFNQGKRHAASLSQREPS*CWNRLS Trigger: GCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCCTCTG...GCTGAGGGAAGCTGCATGTCTCTTTCCCTGATTAAAGTAGAACATGATGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | GTCGCCTGTTTATCTATGCAACCATTAGACTCCAAACTCCAAACAGATCGAAACCAGAGGGAACCCAGCTaGTGCTGGAACAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VACLSMQPLDSKLQTDRNQREPS*CWNRLS Trigger: GCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCCTCTG...GTTTCGATCTGTTTGGAGTTTGGAGTCTAATGGTTGCATAGATAAACAGGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | CAACATCAATCCATCAAGAGGGCAGTCCATGAGCTGAGTTACTGCGGTAAGGAGCCACCTTGTAATCCCTaGACCACCTCCTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHQSIKRAVHELSYCGKEPPCNP*TTSSAF Trigger: AAAAGCTGAGGAGGTGGTGCAGGGATTACAAGGTGG...CTCCTTACCGCAGTAACTCAGCTCATGGACTGCCCTCTTGATGGATTGATGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGTGGAGGACGATTATCTGCTGCATAATTTTACTCCCTTTTTAGTTCAGGCCAGCAGAACAGGATaGCCAGGCCACTCCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVEDDYLLHNFTPFLVQASRTG*PGHSRG Trigger: CCCTCTGGAGTGGCCTGGCCATCCTGTTCTGCTGGC...CTGAACTAAAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCTCCACAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| 3UTR CAA 72 bp | TTTATTGCTTCTTCCACGCCAACATCCAGAATAGACTaGGAAGGGTCCTTCCGGCCACCGGTACAGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIASSTPTSRID*EGSFRPPVQFR Trigger: TCTGAACTGTACCGGTGGCCGGAAGGACCCTTCCAAGTCTATTCTGGATGTTGGCGTGGAAGAAGCAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| CDS-3UTR GCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGAGGGTTGTGGGCTGAGTaGTGTTCCCATCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CYHTLERCLRTQCNSTERGLWAE*CSHLPG Trigger: CCCAGGAAGATGGGAACAGCACTCAGCCCACAACCC...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGTGGAGGACGATTATCTGCTGCATAATTTTACTCCCTTTTTAGTTCAGGAACCCAGCTGCTGCTaGAACAGGCTCAGCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPVEDDYLLHNFTPFLVQEPSCC*NRLSSR Trigger: TCGGCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTC...CTGAACTAAAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCTCCACAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR CCA 90 bp | ATTCTCATCATGTTCTACTTTAATCAGGGAAAGAGACATGCAGCTTCCCTCAGCCTGTTCCCATCTTCCTaGGTCTCCTGGGTGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILIMFYFNQGKRHAASLSLFPSS*VSWVSS Trigger: GGAGGACACCCAGGAGACCCAGGAAGATGGGAACAG...GCTGAGGGAAGCTGCATGTCTCTTTCCCTGATTAAAGTAGAACATGATGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR CCA 90 bp | GTTAGATTCAGGCACCAAACAGGACACCTCTTTGTGACGCTCCAAGAATGTTTCGCACGAAGGATGTCTTaGCTGTGTGGAAGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRFRHQTGHLFVTLQECFARRMS*LCGSRS Trigger: GCTTCTGCTTCCACACAGCCAAGACATCCTTCGTGC...GAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTGTTTGGTGCCTGAATCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
||
| CDS-3UTR TCA 90 bp | GTCGCCTGTTTATCTATGCAACCATTAGACTCCAAACTCCAAACAGATCGAAACCCAAACCAGCCTGTTTaGGCAGAAGCAGTCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VACLSMQPLDSKLQTDRNPNQPV*AEAVLA Trigger: AGCGAGGACTGCTTCTGCTCAAACAGGCTGGTTTGG...GTTTCGATCTGTTTGGAGTTTGGAGTCTAATGGTTGCATAGATAAACAGGCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
||
| CDS-3UTR CCA 90 bp | ATGATTGCTTTCCTCTCATTTGATCAAGTGGGTGTCTGGCCATGTCCTCTGGGAGATGTCTTGGCTGTGTaGAAGCAGAAGCCACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: MIAFLSFDQVGVWPCPLGDVLAV*KQKPHL Trigger: CAAATGTGGCTTCTGCTTCCACACAGCCAAGACATC...TCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR GCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGAGGGCTAGCTCCTCCTTaGAGAATCTCACAAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CYHTLERCLRTQCNSTERGLAPP*RISQAC Trigger: GCAAGCTTGTGAGATTCTGCAAGGAGGAGCTAGCCC...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR CCA 90 bp | TCTCCTGTGGAGGACGATTATCTGCTGCATAATTTTACTCCCTTTTTAGTTCAGGCACGAAGGATGTCTTaGCTGTGTGGAAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SPVEDDYLLHNFTPFLVQARRMS*LCGSRS Trigger: GCTTCTGCTTCCACACAGCCAAGACATCCTTCGTGC...CTGAACTAAAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCTCCACAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| 3UTR CAA 72 bp | AAGTGTACCTTGGCTTTGTCAAGAACCCTGAAGGAATaGCTGCAGTATAAAGCAGCCATCTTGAAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KCTLALSRTLKE*LQYKAAILKQQ Trigger: CTGCTGCTTCAAGATGGCTGCTTTATACTGCAGCAATTCCTTCAGGGTTCTTGACAAAGCCAAGGTACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR TCA 90 bp | ATTCTCATCATGTTCTACTTTAATCAGGGAAAGAGACATGCAGCTTCCCTCAGCCTCCTCCAGAAAAGTTaGTCTTCTCCAAACCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: ILIMFYFNQGKRHAASLSLLQKS*SSPNQP Trigger: AGGCTGGTTTGGAGAAGATCAACTTTTCTGGAGGAG...GCTGAGGGAAGCTGCATGTCTCTTTCCCTGATTAAAGTAGAACATGATGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR GCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGTGCCATTGCTCACTATaGTCACAGAGGGCAGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKCHCSL*SQRAGL Trigger: TAGCCCTGCCCTCTGTGAGCATAGTGAGCAATGGCA...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR GCA 90 bp | CCACGCTTCAGAAACATCTTCTCATCAAATCCACTGAACTTTATTGCTTCTTCCGTGACCAGCACTGTATaGCACTCTCTGATCCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: PRFRNIFSSNPLNFIASSVTSTV*HSLIQD Trigger: GTCTTGGATCAGAGAGTGGCATACAGTGCTGGTCAC...GGAAGAAGCAATAAAGTTCAGTGGATTTGATGAGAAGATGTTTCTGAAGCGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| CDS-3UTR CCA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGATCAATTAGGAGGCACTaGAAAACCTTCCAGCGCACA | + |
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Preference number: 4 (lower is better) Translates to: CYHTLERCLRTQCNSTERSIRRH*KTFQRT Trigger: TGTGCGCTGGAAGGTTTTCCAGTGCCTCCTAATTGA...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| 3UTR CAA 72 bp | AGGGCCTTGATGTGTTCATTCATGTCTTCGTCCACGTaGAAGCGATTAATGACAGAGTTGATCTTGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RALMCSFMSSST*KRLMTELILKA Trigger: GGCTTTCAAGATCAACTCTGTCATTAATCGCTTCAACGTGGACGAAGACATGAATGAACACATCAAGGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| CDS-3UTR TCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGCTGTATGCCACTCTCTaGTCCAAGACCCAAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKLYATL*SKTQVS Trigger: ACTCACTTGGGTCTTGGATCAGAGAGTGGCATACAG...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| CDS-3UTR TCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGCACCTCCTCAGCTTTTaGAGGTTTTCCACATGGTTC | + |
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Preference number: 4 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKHLLSF*RFSTWF Trigger: GAACCATGTGGAAAACCTTCAAAAGCTGAGGAGGTG...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS-3UTR TCA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGCAGGACACCTCTTTGTaGCGCTCCAAGAATGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKQDTSL*RSKNVS Trigger: TGAAACATTCTTGGAGCGTCACAAAGAGGTGTCCTG...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS-3UTR CCA 90 bp | ATTCTCATCATGTTCTACTTTAATCAGGGAAAGAGACATGCAGCTTCCCTCAGCGAGTCTTTCATCTTCTaGTTAGATTCAGGCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: ILIMFYFNQGKRHAASLSESFIF*LDSGTK Trigger: TTTGGTGCCTGAATCTAACCAGAAGATGAAAGACTC...GCTGAGGGAAGCTGCATGTCTCTTTCCCTGATTAAAGTAGAACATGATGAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS GCA 90 bp | CAGCAGAACAGGATGGCCAGGCCACTCCAGAGGGAACCCAGCTGCTaGTGGAACAGGCTCAGCAGCCGAGCAGCTAGAGCAGTGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: QQNRMARPLQREPSC*WNRLSSRAARAVGT Trigger: GGTGCCCACTGCTCTAGCTGCTCGGCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCCTCTGGAGTGGCCTGGCCATCCTGTTCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS GCA 90 bp | AGCCAGCAGAACAGGATGGCCAGGCCACTCCAGAGGGAACCCAGCTaGTGCTGGAACAGGCTCAGCAGCCGAGCAGCTAGAGCAGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SQQNRMARPLQREPS*CWNRLSSRAARAVG Trigger: GCCCACTGCTCTAGCTGCTCGGCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCCTCTGGAGTGGCCTGGCCATCCTGTTCTGCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR CAA 90 bp | GTCACTGGACCTTGCTCCTCTGAGAACCGAACTCTCTCCTGTGGAGGACGATTAAGAAGCAGTCCTCGCTaGGCCTCCTCCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VTGPCSSENRTLSCGGRLRSSPR*ASSRGS Trigger: GCTGCCCCTGGAGGAGGCCAAGCGAGGACTGCTTCT...TAATCGTCCTCCACAGGAGAGAGTTCGGTTCTCAGAGGAGCAAGGTCCAGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS CCA 90 bp | GCAGTCCTCGCTTGGCCTCCTCCAGGGGCAGCACGAAGGATGTCTTaGCTGTGTGGAAGCAGAAGCCACATTTGTAGTTGCACTGACGAG | + |
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Preference number: 5 (lower is better) Translates to: AVLAWPPPGAARRMS*LCGSRSHICSCTDE Trigger: CTCGTCAGTGCAACTACAAATGTGGCTTCTGCTTCCACACAGCCAAGACATCCTTCGTGCTGCCCCTGGAGGAGGCCAAGCGAGGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR CAA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGAGAAGCAGTCCTCGCTaGGCCTCCTCCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGRSSPR*ASSRGS Trigger: GCTGCCCCTGGAGGAGGCCAAGCGAGGACTGCTTCT...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS GCA 90 bp | TGCCATTGCTCACTATGCTCACAGAGGGCAGGGCTAGCTCCTCCTTaGAGAATCTCACAAGCTTGCCCAAGTATTCACCCCTGTCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: CHCSLCSQRAGLAPP*RISQACPSIHPCPE Trigger: TTCAGGACAGGGGTGAATACTTGGGCAAGCTTGTGAGATTCTGCAAGGAGGAGCTAGCCCTGCCCTCTGTGAGCATAGTGAGCAATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS TCA 90 bp | CTAAGTGACCAGCACTGTATGCCACTCTCTGATCCAAGACCCAAGTaGGTCTCCATAGTCCTTGAACCATCTCTCCCGGATAAGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LSDQHCMPLSDPRPK*VSIVLEPSLPDKAA Trigger: GGCAGCCTTATCCGGGAGAGATGGTTCAAGGACTATGGAGACTCACTTGGGTCTTGGATCAGAGAGTGGCATACAGTGCTGGTCACTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137792.7 |
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| CDS-3UTR CAA 90 bp | CTGGACGTGCCACATGGCCTTGGAGCTTTTCAGAAAAGTGTGACAACCTTTCAGAGCACGAAGGATGTCTaGGCTGTGTGGAAGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LDVPHGLGAFQKSVTTFQSTKDV*AVWKQK Trigger: CTTCTGCTTCCACACAGCCAAGACATCCTTCGTGCT...CTGAAAGGTTGTCACACTTTTCTGAAAAGCTCCAAGGCCATGTGGCACGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR CAA 90 bp | ATGATTGCTTTCCTCTCATTTGATCAAGTGGGTGTCTGGCCATGTCCTCTGGGAAGCACGAAGGATGTCTaGGCTGTGTGGAAGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: MIAFLSFDQVGVWPCPLGSTKDV*AVWKQK Trigger: CTTCTGCTTCCACACAGCCAAGACATCCTTCGTGCT...TCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR CAA 90 bp | GAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGGCGGGGCCACCTCCTCAGCTTTaGAAGGTTTTCCACATGGTT | + |
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Preference number: 5 (lower is better) Translates to: EYFKHRDLTHLLCMHKAGPPPQL*KVFHMV Trigger: AACCATGTGGAAAACCTTCAAAAGCTGAGGAGGTGG...CCCCGCCTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS-3UTR CAA 90 bp | ATGATTGCTTTCCTCTCATTTGATCAAGTGGGTGTCTGGCCATGTCCTCTGGGAATGTCTTCGTCCACGTaGAAGCGATTAATGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: MIAFLSFDQVGVWPCPLGMSSST*KRLMTE Trigger: CTCTGTCATTAATCGCTTCAACGTGGACGAAGACAT...TCCCAGAGGACATGGCCAGACACCCACTTGATCAAATGAGAGGAAAGCAATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS-3UTR CAA 90 bp | GTCGCCTGTTTATCTATGCAACCATTAGACTCCAAACTCCAAACAGATCGAAACACAGGGCTCAGGGCCTaGATGTGTTCATTCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: VACLSMQPLDSKLQTDRNTGLRA*MCSFMS Trigger: AGACATGAATGAACACATCAAGGCCCTGAGCCCTGT...GTTTCGATCTGTTTGGAGTTTGGAGTCTAATGGTTGCATAGATAAACAGGCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS-3UTR CAA 90 bp | TCTCCTGTGGAGGACGATTATCTGCTGCATAATTTTACTCCCTTTTTAGTTCAGACATCCAGAATAGACTaGGAAGGGTCCTTCCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SPVEDDYLLHNFTPFLVQTSRID*EGSFRP Trigger: TGGCCGGAAGGACCCTTCCAAGTCTATTCTGGATGT...CTGAACTAAAAAGGGAGTAAAATTATGCAGCAGATAATCGTCCTCCACAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS-3UTR CAA 90 bp | TGTTACCATACATTAGAGCGATGCCTCAGAACACAGTGTAATTCCACAGAGAGATCTCCTCCAGAAAAGTaGATCTTCTCCAAACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: CYHTLERCLRTQCNSTERSPPEK*IFSKPA Trigger: GGCTGGTTTGGAGAAGATCAACTTTTCTGGAGGAGA...TCTCTCTGTGGAATTACACTGTGTTCTGAGGCATCGCTCTAATGTATGGTAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS-3UTR CAA 90 bp | ATTTTTGAATATTTTAAGCACAGAGATCTCACACACCTCCTGTGCATGCACAAGCGATTAATGACAGAGTaGATCTTGAAAGCCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: IFEYFKHRDLTHLLCMHKRLMTE*ILKATL Trigger: CAAGGTGGCTTTCAAGATCAACTCTGTCATTAATCG...CTTGTGCATGCACAGGAGGTGTGTGAGATCTCTGTGCTTAAAATATTCAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020970.10 |
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| CDS GCA 72 bp | AACAGGATGGCCAGGCCACTCCAGAGGGAACCCAGCTaGTGCTGGAACAGGCTCAGCAGCCGAGCAGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: NRMARPLQREPS*CWNRLSSRAAR Trigger: TCTAGCTGCTCGGCTGCTGAGCCTGTTCCAGCAGCAGCTGGGTTCCCTCTGGAGTGGCCTGGCCATCCTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS CAA 72 bp | TCCAAACCAGCCTGTTTGAGCAGAAGCAGTCCTCGCTaGGCCTCCTCCAGGGGCAGCACGAAGGATGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SKPACLSRSSPR*ASSRGSTKDVL Trigger: CAAGACATCCTTCGTGCTGCCCCTGGAGGAGGCCAAGCGAGGACTGCTTCTGCTCAAACAGGCTGGTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS CAA 90 bp | TTGATCTTCTCCAAACCAGCCTGTTTGAGCAGAAGCAGTCCTCGCTaGGCCTCCTCCAGGGGCAGCACGAAGGATGTCTTGGCTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LIFSKPACLSRSSPR*ASSRGSTKDVLAVW Trigger: CCACACAGCCAAGACATCCTTCGTGCTGCCCCTGGAGGAGGCCAAGCGAGGACTGCTTCTGCTCAAACAGGCTGGTTTGGAGAAGATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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| CDS GCA 72 bp | TCACTATGCTCACAGAGGGCAGGGCTAGCTCCTCCTTaGAGAATCTCACAAGCTTGCCCAAGTATTCACCCC | + |
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Preference number: 6 (lower is better) Translates to: SLCSQRAGLAPP*RISQACPSIHP Trigger: GGGGTGAATACTTGGGCAAGCTTGTGAGATTCTGCAAGGAGGAGCTAGCCCTGCCCTCTGTGAGCATAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020970.10 ENSMUST00000137792.7 |
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