Pregenerated sensors for RRS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061024Ensembl transcript IDs: ENSMUST00000072079.9
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCACTGTAACTACTTTGTTTTTCTCAAGCACACTCCATATTGGTaGCCAGGTTACTGGCTTCACATGCAACCTCTACCGACAGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: NHCNYFVFLKHTPYW*PGYWLHMQPLPTVK Trigger: TTTTACTGTCGGTAGAGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTTACAGTGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| 3UTR CCA 90 bp | GTTACAAACAAAATGACAACTATTTCTGGACTTAAAGCAATCCATTaGCCAAATGCACCACCTGAACCAACACCAAAAAGCACTATACTT | + |
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Preference number: 1 (lower is better) Translates to: VTNKMTTISGLKAIH*PNAPPEPTPKSTIL Trigger: AAGTATAGTGCTTTTTGGTGTTGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGTCATTTTGTTTGTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| 3UTR-3UTR TCA 90 bp | ACAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAAATGTCAAATGTCACTaGGGGCAGCGGCCACCTATA | + |
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Preference number: 2 (lower is better) Translates to: TTISGLKAIHWPNAPPEPNVKCH*GQRPPI Trigger: TATAGGTGGCCGCTGCCCTCAGTGACATTTGACATT...TGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| 3UTR GCA 72 bp | AACTACTTTGTTTTTCTCAAGCACACTCCATATTGGTaGCCAGGTTACTGGCTTCACATGCAACCTCTACCG | + |
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Preference number: 3 (lower is better) Translates to: NYFVFLKHTPYW*PGYWLHMQPLP Trigger: CGGTAGAGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| 3UTR CCA 72 bp | TGTAACTACTTTGTTTTTCTCAAGCACACTCCATATTaGTGCCCAGGTTACTGGCTTCACATGCAACCTCTA | + |
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Preference number: 3 (lower is better) Translates to: CNYFVFLKHTPY*CPGYWLHMQPL Trigger: TAGAGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| 3UTR CCA 72 bp | AAAATGACAACTATTTCTGGACTTAAAGCAATCCATTaGCCAAATGCACCACCTGAACCAACACCAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: KMTTISGLKAIH*PNAPPEPTPKS Trigger: GCTTTTTGGTGTTGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGTCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| 3UTR TCA 72 bp | AGCCAATTAAACAAAAGCCACCGGTTACAAACAAAATaGCAACTATTTCTGGACTTAAAGCAATCCATTGGC | + |
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Preference number: 3 (lower is better) Translates to: SQLNKSHRLQTK*QLFLDLKQSIG Trigger: GCCAATGGATTGCTTTAAGTCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | ATTATAATCTCAGCACTTGGCCCTGAGTTCCAGGGCAGCCTTGGTTCCATAGTGGCGGGTGAGCGGCCGTaGTCGGGGCAGCGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: IIISALGPEFQGSLGSIVAGERP*SGQRLL Trigger: GAGAAGCCGCTGCCCCGACCACGGCCGCTCACCCGC...CACTATGGAACCAAGGCTGCCCTGGAACTCAGGGCCAAGTGCTGAGATTATAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | TTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTAGGCGCGCGAACTGCTaGCAGCGGGTGAGCGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: FLKHTPYWCPGYWLHMQPRRANC*QRVSGR Trigger: ACGGCCGCTCACCCGCTGGCAGCAGTTCGCGCGCCT...AGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR TCA 90 bp | GAAATCTGCTGCTCGATTATAATCTCAGCACTTGGCCCTGAGTTCCAGGGCAGCAGGGTGCAGGCCGGCTaGGCTGGGCATCTGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: EICCSIIISALGPEFQGSRVQAG*AGHLHL Trigger: AAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCT...GCTGCCCTGGAACTCAGGGCCAAGTGCTGAGATTATAATCGAGCAGCAGATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR TCA 90 bp | ACAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAACTGCTGCCAGCGGGTaGGCGGCCGTGGTCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TTISGLKAIHWPNAPPEPTAASG*AAVVGA Trigger: TGCCCCGACCACGGCCGCTCACCCGCTGGCAGCAGT...TGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | TTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTTTAAGGCGCGCGAACTaGTGCCAGCGGGTGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: FLKHTPYWCPGYWLHMQPLRRAN*CQRVSG Trigger: GCCGCTCACCCGCTGGCAGCAGTTCGCGCGCCTTAA...AGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | ACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTCTACCGACAGTACCTTGGCCACTTGCATaGCGCGGCCCAGCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TPYWCPGYWLHMQPLPTVPWPLA*RGPALP Trigger: AGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGG...TACTGTCGGTAGAGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR TCA 90 bp | TTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTGCTCCTTGTGCACCGTaGTGCGCTGCAGCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: FLKHTPYWCPGYWLHMQPAPCAP*CAAASP Trigger: CGGAGAAGCTGCAGCGCATCACGGTGCACAAGGAGC...AGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | ACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTCTACCGACAGTAGGGGAGCTTTCTCCTTaGGAAGGCGCTCCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TPYWCPGYWLHMQPLPTVGELSP*EGAPGS Trigger: GCTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCC...TACTGTCGGTAGAGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | TTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTAAGCGGTGGAAACCTTaGCCACTTGCATGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: FLKHTPYWCPGYWLHMQPKRWKP*PLAWRG Trigger: GCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTT...AGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | ATTATAATCTCAGCACTTGGCCCTGAGTTCCAGGGCAGCCTTGGTTCCATAGTGCTCCTCTTCCCACCTTaGGGCGGCACTCCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IIISALGPEFQGSLGSIVLLFPP*GGTPFF Trigger: GAAGAAAGGAGTGCCGCCCCAAGGTGGGAAGAGGAG...CACTATGGAACCAAGGCTGCCCTGGAACTCAGGGCCAAGTGCTGAGATTATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | CAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAAGGCATCTGCATCTTGTaGGCGCGAGCCAGGTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: QLFLDLKQSIGQMHHLNQGICIL*ARARFR Trigger: GCGGAACCTGGCTCGCGCGCACAAGATGCAGATGCC...TTGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | ACAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAGCTGAGCTGGGCATCTaGATCTTGTGCGCGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TTISGLKAIHWPNAPPEPAELGI*ILCARA Trigger: GGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGC...TGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | TTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTTCCTCTTCCCTCATCTaGTTGTTGGTGGCCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: FLKHTPYWCPGYWLHMQPSSSLI*LLVALV Trigger: GACGAGGGCCACCAACAAGCAGATGAGGGAAGAGGA...AGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | ACAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAGCAGGCCGGCTGAGCTaGGCATCTGCATCTTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: TTISGLKAIHWPNAPPEPAGRLS*ASASCA Trigger: CGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGC...TGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | CAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAATGGTTGATGAGCAGCTaGGTGTTGTCCCGCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QLFLDLKQSIGQMHHLNQWLMSS*VLSRAR Trigger: CCTGGCGCGGGACAACACGCAGCTGCTCATCAACCA...TTGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | CAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTAGATATAATTTTCCAACGGCGCCGCCACTaGCCACTCGCCTCGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QVPASIYNTCKSQVDIIFQRRRH*PLASSH Trigger: GTGGGACGAGGCGAGTGGCCAGTGGCGGCGCCGTTG...GAAAATTATATCTACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | ACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTCTACCGACAGTACGAAGTAGCTCCAACTaGTTCTTTTTCTCGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: TPYWCPGYWLHMQPLPTVRSSSN*FFFSAA Trigger: CGCAGCCGAGAAAAAGAACCAGTTGGAGCTACTTCG...TACTGTCGGTAGAGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | TTAAAAGCAACACCAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTTTCTCCGCCTCCTCCTaGTCTGCCTTGGCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LKATPGTCIHLQYLQITGFSASS*SALASS Trigger: GCTGCTGGCCAAGGCAGAGCAGGAGGAGGCGGAGAA...ACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTGGTGTTGCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATATGCACCGTGATGCGCTaGAGCTTCTCCGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IQSQDKKAGLNLFLVLAICTVMR*SFSASS Trigger: GGAGGAGGCGGAGAAGCTGCAGCGCATCACGGTGCA...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | GTAACTACTTTGTTTTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCCCACGCGTTCTTTCTTaGCCTGAGTCCTCTTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: VTTLFFSSTLHIGAQVTGPRVLS*PESSWR Trigger: TCGCCAAGAGGACTCAGGCCAAGAAAGAACGCGTGG...GCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | ACAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCACCCTCATCTGCTTGTTaGTGGCCCTCGTCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TTISGLKAIHWPNAPPEPPSSAC*WPSSRP Trigger: TGGACGTGACGAGGGCCACCAACAAGCAGATGAGGG...TGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATAAGCTCCAGCTCCTTGTaGACCGTGATGCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IQSQDKKAGLNLFLVLAISSSSL*TVMRCS Trigger: GCTGCAGCGCATCACGGTGCACAAGGAGCTGGAGCT...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | TTAAAAGCAACACCAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTCCGAAGCCAGCAGGTTaGCCAGGTCGAACTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LKATPGTCIHLQYLQITGPKPAG*PGRTPA Trigger: AGCTGGAGTTCGACCTGGGCAACCTGCTGGCTTCGG...ACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTGGTGTTGCTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | TTAAAAGCAACACCAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTGTCCTCTTGGCGAACTaGTCTTCCATGGGGTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LKATPGTCIHLQYLQITGVLLAN*SSMGSA Trigger: CGCCGACCCCATGGAAGACCAGTTCGCCAAGAGGAC...ACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTGGTGTTGCTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | GTAACTACTTTGTTTTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCGCAGAAGGCCAGGAATaGTTTTTGCTTCCCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VTTLFFSSTLHIGAQVTGAEGQE*FLLPKP Trigger: AGGCTTGGGAAGCAAAAAGCATTCCTGGCCTTCTGC...GCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | AAGCCAATTAAACAAAAGCCACCGGTTACAAACAAAATGACAACTATTTCTGGAGGCAGCCGCCACAGCTaGTTGATGAGCAGCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: KPIKQKPPVTNKMTTISGGSRHS*LMSSCV Trigger: CACGCAGCTGCTCATCAACCAGCTGTGGCGGCTGCC...TCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | TACTGTAACGCAGTATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCGTCCCACCGAAGCGGTaGAAACCTTGGCCACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: YCNAVSKVKIKRQALTYSVPPKR*KPWPLA Trigger: TGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGAC...GGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | CAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTAGATATAATTTTCTTGGGAAGGCGCTCCTaGAAGCGTCCCACCGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: QVPASIYNTCKSQVDIIFLGRRS*KRPTEA Trigger: CGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAA...GAAAATTATATCTACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR TCA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATACGTTCTTTCTTGGCCTaGGTCCTCTTGGCGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: IQSQDKKAGLNLFLVLAIRSFLA*VLLANW Trigger: CCAGTTCGCCAAGAGGACTCAGGCCAAGAAAGAACG...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR TCA 90 bp | AAACCAATCTACTGTAACGCAGTATCCAAAGTCAAGATAAAAAGGCAGGCCTTATCCCCAAAGAGGGGCTaGAACTTCCTCTTCTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: KPIYCNAVSKVKIKRQALSPKRG*NFLFLP Trigger: CGGCAAGAAGAGGAAGTTTCAGCCCCTCTTTGGGGA...TAAGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTAGATTGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAATTAAACAAAAGCCACCGGTTACAAACAAAATGACAACTATTTCTGGAGAAACCTTGGCCACTTaGATGGCGCGGCCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: KPIKQKPPVTNKMTTISGETLAT*MARPSS Trigger: AGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTC...TCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAATTAAACAAAAGCCACCGGTTACAAACAAAATGACAACTATTTCTGGAGAAACTTCCTCTTCTTaGCGGAGCCCCGGGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: KPIKQKPPVTNKMTTISGETSSS*RSPGEL Trigger: AAGCTCCCCGGGGCTCCGGCAAGAAGAGGAAGTTTC...TCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | AAACCAATCTACTGTAACGCAGTATCCAAAGTCAAGATAAAAAGGCAGGCCTTAGTTCTTTTTCTCGGCTaGGAAGTCCCCAAAGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: KPIYCNAVSKVKIKRQALVLFLG*EVPKEG Trigger: CCCCTCTTTGGGGACTTCGCAGCCGAGAAAAAGAAC...TAAGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTAGATTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR GCA 90 bp | AAACCAATCTACTGTAACGCAGTATCCAAAGTCAAGATAAAAAGGCAGGCCTTAGCACTCCTTTCTTCTTaGCAGCTAAAGCAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KPIYCNAVSKVKIKRQALALLSS*QLKQKA Trigger: GGCCTTCTGCTTTAGCTGGCAAGAAGAAAGGAGTGC...TAAGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTAGATTGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | CAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTAGATATAATTTTCCGTCCCACACGAGGTTaGTCTTCTTCTTGGGACGGA | + |
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Preference number: 4 (lower is better) Translates to: QVPASIYNTCKSQVDIIFRPTRG*SSSWDG Trigger: TCCGTCCCAAGAAGAAGACCAACCTCGTGTGGGACG...GAAAATTATATCTACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CCA 90 bp | AAGCCAATTAAACAAAAGCCACCGGTTACAAACAAAATGACAACTATTTCTGGATGGCCTGAGTCCTCTTaGCGAACTGGTCTTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: KPIKQKPPVTNKMTTISGWPESS*RTGLPW Trigger: CCATGGAAGACCAGTTCGCCAAGAGGACTCAGGCCA...TCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| 3UTR CAA 72 bp | AAAGCAACACCAGGTACCTGCATCCATTTACAATACTaGCAAATCACAGGTAGATATAATTTTCCCCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: KATPGTCIHLQY*QITGRYNFPPP Trigger: GGGCGGGGGAAAATTATATCTACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTGGTGTTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR TCA 90 bp | CAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTAGATATAATTTTCGTTTCTTGCTGTTCATaGCTCGAAGTAGCTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: QVPASIYNTCKSQVDIIFVSCCS*LEVAPT Trigger: AGTTGGAGCTACTTCGAGTCATGAACAGCAAGAAAC...GAAAATTATATCTACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 90 bp | GATTCCCTTAAGGCGCGCGAACTGCTGCCAGCGGGTGAGCGGCCGTaGTCGGGGCAGCGGCTTCTCGCGGGGCAGGCGAGTGGCGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: DSLKARELLPAGERP*SGQRLLAGQASGGL Trigger: GAGCCCGCCACTCGCCTGCCCCGCGAGAAGCCGCTGCCCCGACCACGGCCGCTCACCCGCTGGCAGCAGTTCGCGCGCCTTAAGGGAATC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS GCA 90 bp | TGCATGGCGCGGCCCAGCTCTTCCTTACTCTGGTGTCCAGTAGGGTaGAGGCCGGCTGAGCTGGGCATCTGCATCTTGTGCGCGCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CMARPSSSLLWCPVG*RPAELGICILCARA Trigger: GGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS TCA 90 bp | GCCCAGCTCTTCCTTACTCTGGTGTCCAGTAGGGTGCAGGCCGGCTaGGCTGGGCATCTGCATCTTGTGCGCGCGAGCCAGGTTCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQLFLTLVSSRVQAG*AGHLHLVRASQVPQ Trigger: CTGCGGAACCTGGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGAGTAAGGAAGAGCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 90 bp | TGTCCAGTAGGGTGCAGGCCGGCTGAGCTGGGCATCTGCATCTTGTaGGCGCGAGCCAGGTTCCGCAGACGGTTCAGCTCATTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPVGCRPAELGICIL*ARARFRRRFSSFLA Trigger: GGCCAAGAATGAGCTGAACCGTCTGCGGAACCTGGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 90 bp | CGCTCCTGGAAGCGTCCCACCGAAGCGGTGGAAACCTTGGCCACTTaGATGGCGCGGCCCAGCTCTTCCTTACTCTGGTGTCCAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSWKRPTEAVETLAT*MARPSSSLLWCPVG Trigger: CCCTACTGGACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | TGGGAAGGCGCTCCTGGAAGCGTCCCACCGAAGCGGTGGAAACCTTaGCCACTTGCATGGCGCGGCCCAGCTCTTCCTTACTCTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WEGAPGSVPPKRWKP*PLAWRGPALPYSGV Trigger: GACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | TTCTTGCCGGAGCCCCGGGGAGCTTTCTCCTTGGGAAGGCGCTCCTaGAAGCGTCCCACCGAAGCGGTGGAAACCTTGGCCACTTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: FLPEPRGAFSLGRRS*KRPTEAVETLATCM Trigger: CATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCCGGGGCTCCGGCAAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 90 bp | TTACTCTGGTGTCCAGTAGGGTGCAGGCCGGCTGAGCTGGGCATCTaGATCTTGTGCGCGCGAGCCAGGTTCCGCAGACGGTTCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLWCPVGCRPAELGI*ILCARARFRRRFSS Trigger: TGAGCTGAACCGTCTGCGGAACCTGGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGAGTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | GAAACCTTGGCCACTTGCATGGCGCGGCCCAGCTCTTCCTTACTCTaGTGTCCAGTAGGGTGCAGGCCGGCTGAGCTGGGCATCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ETLATCMARPSSSLL*CPVGCRPAELGICI Trigger: GATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | CTTTCTCCTTGGGAAGGCGCTCCTGGAAGCGTCCCACCGAAGCGGTaGAAACCTTGGCCACTTGCATGGCGCGGCCCAGCTCTTCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPWEGAPGSVPPKR*KPWPLAWRGPALPY Trigger: GTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAAGGAGAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | GCTGAAACTTCCTCTTCTTGCCGGAGCCCCGGGGAGCTTTCTCCTTaGGAAGGCGCTCCTGGAAGCGTCCCACCGAAGCGGTGGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: AETSSSCRSPGELSP*EGAPGSVPPKRWKP Trigger: AGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCCGGGGCTCCGGCAAGAAGAGGAAGTTTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | TCAGCTCATTCTTGGCCACGCGTTCTTTCTTGGCCTGAGTCCTCTTaGCGAACTGGTCTTCCATGGGGTCGGCGCTCCCAGGCACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SAHSWPRVLSWPESS*RTGLPWGRRSQAPR Trigger: TCGAGGTGCCTGGGAGCGCCGACCCCATGGAAGACCAGTTCGCCAAGAGGACTCAGGCCAAGAAAGAACGCGTGGCCAAGAATGAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | GGTTCCGCAGACGGTTCAGCTCATTCTTGGCCACGCGTTCTTTCTTaGCCTGAGTCCTCTTGGCGAACTGGTCTTCCATGGGGTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSADGSAHSWPRVLS*PESSWRTGLPWGRR Trigger: GCGCCGACCCCATGGAAGACCAGTTCGCCAAGAGGACTCAGGCCAAGAAAGAACGCGTGGCCAAGAATGAGCTGAACCGTCTGCGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 90 bp | TCTTGTGCGCGCGAGCCAGGTTCCGCAGACGGTTCAGCTCATTCTTaGCCACGCGTTCTTTCTTGGCCTGAGTCCTCTTGGCGAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCAREPGSADGSAHS*PRVLSWPESSWRTG Trigger: ACCAGTTCGCCAAGAGGACTCAGGCCAAGAAAGAACGCGTGGCCAAGAATGAGCTGAACCGTCTGCGGAACCTGGCTCGCGCGCACAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS-3UTR CAA 90 bp | ACAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAATGAGCAGCTGCGTGTaGTCCCGCGCCAGGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TTISGLKAIHWPNAPPEPMSSCV*SRARAR Trigger: GCGGGCCCTGGCGCGGGACAACACGCAGCTGCTCAT...TGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS TCA 90 bp | TGTTGGTGGCCCTCGTCACGTCCAGCCGAGGTTTCTTGCTGTTCATaGCTCGAAGTAGCTCCAACTGGTTCTTTTTCTCGGCTGCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CWWPSSRPAEVSCCS*LEVAPTGSFSRLRS Trigger: ACTTCGCAGCCGAGAAAAAGAACCAGTTGGAGCTACTTCGAGTCATGAACAGCAAGAAACCTCGGCTGGACGTGACGAGGGCCACCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | GTAACTACTTTGTTTTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCTCCAGCTCCAGCTCCTaGTGCACCGTGATGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VTTLFFSSTLHIGAQVTGSSSSS*CTVMRC Trigger: GCAGCGCATCACGGTGCACAAGGAGCTGGAGCTGGA...GCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS-3UTR CAA 90 bp | ACAACTATTTCTGGACTTAAAGCAATCCATTGGCCAAATGCACCACCTGAACCAAGCCGCCACAGCTGGTaGATGAGCAGCTGCGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTISGLKAIHWPNAPPEPSRHSW*MSSCVL Trigger: CAACACGCAGCTGCTCATCAACCAGCTGTGGCGGCT...TGGTTCAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS-3UTR CAA 90 bp | AAACCAATCTACTGTAACGCAGTATCCAAAGTCAAGATAAAAAGGCAGGCCTTAGGAAACCTTGGCCACTaGCATGGCGCGGCCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KPIYCNAVSKVKIKRQALGNLGH*HGAAQL Trigger: GAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCC...TAAGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTAGATTGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS-3UTR CAA 90 bp | ACTCCATATTGGTGCCCAGGTTACTGGCTTCACATGCAACCTCTACCGACAGTATCCAGCCGAGGTTTCTaGCTGTTCATGACTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPYWCPGYWLHMQPLPTVSSRGF*LFMTRS Trigger: ACTTCGAGTCATGAACAGCAAGAAACCTCGGCTGGA...TACTGTCGGTAGAGGTTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS-3UTR CAA 90 bp | AAACCAATCTACTGTAACGCAGTATCCAAAGTCAAGATAAAAAGGCAGGCCTTATCCGAAGCCAGCAGGTaGCCCAGGTCGAACTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPIYCNAVSKVKIKRQALSEASR*PRSNSS Trigger: GCTGGAGTTCGACCTGGGCAACCTGCTGGCTTCGGA...TAAGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTAGATTGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTAACGCAGTATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCGAAGCGGTGGAAACCTaGGCCACTTGCATGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YCNAVSKVKIKRQALTYSEAVET*ATCMAR Trigger: CCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTC...GGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS-3UTR CAA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATACGGGGAGCTTTCTCCTaGGGAAGGCGCTCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IQSQDKKAGLNLFLVLAIRGAFS*GRRSWK Trigger: CTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCCG...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | AAGCCAATTAAACAAAAGCCACCGGTTACAAACAAAATGACAACTATTTCTGGAGGGCCGCCCTTTCTCTaGCCCGAAGGTCCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KPIKQKPPVTNKMTTISGGPPFL*PEGPCR Trigger: CCGGCAAGGACCTTCGGGCAAGAGAAAGGGCGGCCC...TCCAGAAATAGTTGTCATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | GTAACTACTTTGTTTTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCCGGTTCAGCTCATTCTaGGCCACGCGTTCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTTLFFSSTLHIGAQVTGRFSSF*ATRSFL Trigger: CAAGAAAGAACGCGTGGCCAAGAATGAGCTGAACCG...GCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATATCCCTCATCTGCTTGTaGGTGGCCCTCGTCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IQSQDKKAGLNLFLVLAISLICL*VALVTS Trigger: GGACGTGACGAGGGCCACCAACAAGCAGATGAGGGA...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | TTAAAAGCAACACCAGGTACCTGCATCCATTTACAATACTTGCAAATCACAGGTCCTCCTCTTCCCACCTaGGGGCGGCACTCCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKATPGTCIHLQYLQITGPPLPT*GRHSFL Trigger: AAGAAAGGAGTGCCGCCCCAAGGTGGGAAGAGGAGG...ACCTGTGATTTGCAAGTATTGTAAATGGATGCAGGTACCTGGTGTTGCTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | GTAACTACTTTGTTTTTCTCAAGCACACTCCATATTGGTGCCCAGGTTACTGGCAGGTTGGTCTTCTTCTaGGGACGGATTCCCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTTLFFSSTLHIGAQVTGRLVFF*GRIPLR Trigger: CCTTAAGGGAATCCGTCCCAAGAAGAAGACCAACCT...GCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAAAAACAAAGTAGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATATCGTCCCACACGAGGTaGGTCTTCTTCTTGGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: IQSQDKKAGLNLFLVLAISSHTR*VFFLGR Trigger: CCGTCCCAAGAAGAAGACCAACCTCGTGTGGGACGA...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATATCTTCCCTCATCTGCTaGTTGGTGGCCCTCGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: IQSQDKKAGLNLFLVLAISSLIC*LVALVT Trigger: CGTGACGAGGGCCACCAACAAGCAGATGAGGGAAGA...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS-3UTR CAA 90 bp | ATCCAAAGTCAAGATAAAAAGGCAGGCCTTAACTTATTCCTGGTTCTGGCTATAGGCCAGGAATGCTTTTaGCTTCCCAAGCCTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQSQDKKAGLNLFLVLAIGQECF*LPKPPF Trigger: GAAAGGAGGCTTGGGAAGCAAAAAGCATTCCTGGCC...TATAGCCAGAACCAGGAATAAGTTAAGGCCTGCCTTTTTATCTTGACTTTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | GTGGTCGGGGCAGCGGCTTCTCGCGGGGCAGGCGAGTaGCGGGCTCCGGCAAGCGCGCGACCACCGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVGAAASRGAGE*RAPASARPPPP Trigger: AGGAGGCGGTGGTCGCGCGCTTGCCGGAGCCCGCCACTCGCCTGCCCCGCGAGAAGCCGCTGCCCCGACCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 90 bp | CGCTCGGTCGGCAGCCGCCACAGCTGGTTGATGAGCAGCTGCGTGTaGTCCCGCGCCAGGGCCCGCAGCTCGGCCTCCGGCGACGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSVGSRHSWLMSSCV*SRARARSSASGDGP Trigger: CGGGCCGTCGCCGGAGGCCGAGCTGCGGGCCCTGGCGCGGGACAACACGCAGCTGCTCATCAACCAGCTGTGGCGGCTGCCGACCGAGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | AAGGCGCGCGAACTGCTGCCAGCGGGTGAGCGGCCGTaGTCGGGGCAGCGGCTTCTCGCGGGGCAGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KARELLPAGERP*SGQRLLAGQAS Trigger: ACTCGCCTGCCCCGCGAGAAGCCGCTGCCCCGACCACGGCCGCTCACCCGCTGGCAGCAGTTCGCGCGCCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 72 bp | TTCTTGGGACGGATTCCCTTAAGGCGCGCGAACTGCTaGCAGCGGGTGAGCGGCCGTGGTCGGGGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLGRIPLRRANC*QRVSGRGRGSG Trigger: GCCGCTGCCCCGACCACGGCCGCTCACCCGCTGGCAGCAGTTCGCGCGCCTTAAGGGAATCCGTCCCAAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS GCA 72 bp | TTCTTCTTGGGACGGATTCCCTTAAGGCGCGCGAACTaGTGCCAGCGGGTGAGCGGCCGTGGTCGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FFLGRIPLRRAN*CQRVSGRGRGS Trigger: GCTGCCCCGACCACGGCCGCTCACCCGCTGGCAGCAGTTCGCGCGCCTTAAGGGAATCCGTCCCAAGAAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 72 bp | GGGTGCAGGCCGGCTGAGCTGGGCATCTGCATCTTGTaGGCGCGAGCCAGGTTCCGCAGACGGTTCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GCRPAELGICIL*ARARFRRRFSS Trigger: TGAGCTGAACCGTCTGCGGAACCTGGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 72 bp | TGTCCAGTAGGGTGCAGGCCGGCTGAGCTGGGCATCTaGATCTTGTGCGCGCGAGCCAGGTTCCGCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: CPVGCRPAELGI*ILCARARFRRR Trigger: CCGTCTGCGGAACCTGGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 72 bp | GCCACTTGCATGGCGCGGCCCAGCTCTTCCTTACTCTaGTGTCCAGTAGGGTGCAGGCCGGCTGAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATCMARPSSSLL*CPVGCRPAELG Trigger: GCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 72 bp | TGGGAAGGCGCTCCTGGAAGCGTCCCACCGAAGCGGTaGAAACCTTGGCCACTTGCATGGCGCGGCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WEGAPGSVPPKR*KPWPLAWRGPA Trigger: AGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 72 bp | GAGCCCCGGGGAGCTTTCTCCTTGGGAAGGCGCTCCTaGAAGCGTCCCACCGAAGCGGTGGAAACCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPRGAFSLGRRS*KRPTEAVETLA Trigger: GGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCCGGGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 72 bp | TCCTCTTCTTGCCGGAGCCCCGGGGAGCTTTCTCCTTaGGAAGGCGCTCCTGGAAGCGTCCCACCGAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSCRSPGELSP*EGAPGSVPPKR Trigger: CCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCCGGGGCTCCGGCAAGAAGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CAA 90 bp | CCCCAACGGCGCCGCCACTGGCCACTCGCCTCGTCCCACACGAGGTaGGTCTTCTTCTTGGGACGGATTCCCTTAAGGCGCGCGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQRRRHWPLASSHTR*VFFLGRIPLRRANC Trigger: GCAGTTCGCGCGCCTTAAGGGAATCCGTCCCAAGAAGAAGACCAACCTCGTGTGGGACGAGGCGAGTGGCCAGTGGCGGCGCCGTTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 72 bp | CCCGGCGGGCCGCCCTTTCTCTTGCCCGAAGGTCCTTaGCGGCCCCCTTTCCTCTTGCCTTTCTGGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: PGGPPFLLPEGP*RPPFLLPFWLI Trigger: AATGAGCCAGAAAGGCAAGAGGAAAGGGGGCCGGCAAGGACCTTCGGGCAAGAGAAAGGGCGGCCCGCCGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CAA 72 bp | TTCCTCTTCTTGCCGGAGCCCCGGGGAGCTTTCTCCTaGGGAAGGCGCTCCTGGAAGCGTCCCACCGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLFLPEPRGAFS*GRRSWKRPTEA Trigger: CGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCCGGGGCTCCGGCAAGAAGAGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CAA 72 bp | ACCCGGCGGGCCGCCCTTTCTCTTGCCCGAAGGTCCTaGCCGGCCCCCTTTCCTCTTGCCTTTCTGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TRRAALSLARRS*PAPFPLAFLAH Trigger: ATGAGCCAGAAAGGCAAGAGGAAAGGGGGCCGGCAAGGACCTTCGGGCAAGAGAAAGGGCGGCCCGCCGGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CAA 90 bp | CGCCACTGGCCACTCGCCTCGTCCCACACGAGGTTGGTCTTCTTCTaGGGACGGATTCCCTTAAGGCGCGCGAACTGCTGCCAGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RHWPLASSHTRLVFF*GRIPLRRANCCQRV Trigger: CACCCGCTGGCAGCAGTTCGCGCGCCTTAAGGGAATCCGTCCCAAGAAGAAGACCAACCTCGTGTGGGACGAGGCGAGTGGCCAGTGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS GCA 72 bp | AGGTTGCCCAGGTCGAACTCCAGCTCCAGCTCCTTGTaGACCGTGATGCGCTGCAGCTTCTCCGCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLPRSNSSSSSL*TVMRCSFSASS Trigger: GGAGGAGGCGGAGAAGCTGCAGCGCATCACGGTGCACAAGGAGCTGGAGCTGGAGTTCGACCTGGGCAACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
||
| CDS CCA 72 bp | GCTCCTGGAAGCGTCCCACCGAAGCGGTGGAAACCTTaGCCACTTGCATGGCGCGGCCCAGCTCTTCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: APGSVPPKRWKP*PLAWRGPALPY Trigger: GTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 72 bp | AGCAGGTTGCCCAGGTCGAACTCCAGCTCCAGCTCCTaGTGCACCGTGATGCGCTGCAGCTTCTCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRLPRSNSSSSS*CTVMRCSFSAS Trigger: GGAGGCGGAGAAGCTGCAGCGCATCACGGTGCACAAGGAGCTGGAGCTGGAGTTCGACCTGGGCAACCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 72 bp | CGCCGCCACTGGCCACTCGCCTCGTCCCACACGAGGTaGGTCTTCTTCTTGGGACGGATTCCCTTAAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RRHWPLASSHTR*VFFLGRIPLRR Trigger: GCGCCTTAAGGGAATCCGTCCCAAGAAGAAGACCAACCTCGTGTGGGACGAGGCGAGTGGCCAGTGGCGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 72 bp | CGCTCCTGGAAGCGTCCCACCGAAGCGGTGGAAACCTaGGCCACTTGCATGGCGCGGCCCAGCTCTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: RSWKRPTEAVET*ATCMARPSSSL Trigger: TAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 90 bp | GCGCTCCTGGAAGCGTCCCACCGAAGCGGTGGAAACCTTGGCCACTaGCATGGCGCGGCCCAGCTCTTCCTTACTCTGGTGTCCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: ALLEASHRSGGNLGH*HGAAQLFLTLVSSR Trigger: CCTACTGGACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 90 bp | TGGTGTCCAGTAGGGTGCAGGCCGGCTGAGCTGGGCATCTGCATCTaGTGCGCGCGAGCCAGGTTCCGCAGACGGTTCAGCTCATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: WCPVGCRPAELGICI*CARARFRRRFSSFL Trigger: CAAGAATGAGCTGAACCGTCTGCGGAACCTGGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 90 bp | TTGGGAAGGCGCTCCTGGAAGCGTCCCACCGAAGCGGTGGAAACCTaGGCCACTTGCATGGCGCGGCCCAGCTCTTCCTTACTCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LGRRSWKRPTEAVET*ATCMARPSSSLLWC Trigger: ACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTTCCAGGAGCGCCTTCCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS TCA 72 bp | TTCCTTACTCTGGTGTCCAGTAGGGTGCAGGCCGGCTaGGCTGGGCATCTGCATCTTGTGCGCGCGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FLTLVSSRVQAG*AGHLHLVRASQ Trigger: CTGGCTCGCGCGCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGAGTAAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS GCA 72 bp | CGGCCCAGCTCTTCCTTACTCTGGTGTCCAGTAGGGTaGAGGCCGGCTGAGCTGGGCATCTGCATCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RPSSSLLWCPVG*RPAELGICILC Trigger: GCACAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGAGTAAGGAAGAGCTGGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS GCA 72 bp | AAGCGTCCCACCGAAGCGGTGGAAACCTTGGCCACTTaGATGGCGCGGCCCAGCTCTTCCTTACTCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: KRPTEAVETLAT*MARPSSSLLWC Trigger: ACACCAGAGTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCTTCGGTGGGACGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | TCTTGGCCACGCGTTCTTTCTTGGCCTGAGTCCTCTTaGCGAACTGGTCTTCCATGGGGTCGGCGCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SWPRVLSWPESS*RTGLPWGRRSQ Trigger: CTGGGAGCGCCGACCCCATGGAAGACCAGTTCGCCAAGAGGACTCAGGCCAAGAAAGAACGCGTGGCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | CAGCCTCCTCCTGGTCCTCTTCCCTCATCTGCTTGTTaGTGGCCCTCGTCACGTCCAGCCGAGGTTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QPPPGPLPSSAC*WPSSRPAEVSC Trigger: GCAAGAAACCTCGGCTGGACGTGACGAGGGCCACCAACAAGCAGATGAGGGAAGAGGACCAGGAGGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 72 bp | CCACTCGCCTCGTCCCACACGAGGTTGGTCTTCTTCTaGGGACGGATTCCCTTAAGGCGCGCGAACTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLASSHTRLVFF*GRIPLRRANCC Trigger: GCAGCAGTTCGCGCGCCTTAAGGGAATCCGTCCCAAGAAGAAGACCAACCTCGTGTGGGACGAGGCGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | CGCGAGCCAGGTTCCGCAGACGGTTCAGCTCATTCTTaGCCACGCGTTCTTTCTTGGCCTGAGTCCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: REPGSADGSAHS*PRVLSWPESSW Trigger: CCAAGAGGACTCAGGCCAAGAAAGAACGCGTGGCCAAGAATGAGCTGAACCGTCTGCGGAACCTGGCTCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | CCTCCTCCTGGTCCTCTTCCCTCATCTGCTTGTTGGTaGCCCTCGTCACGTCCAGCCGAGGTTTCTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PPPGPLPSSACW*PSSRPAEVSCC Trigger: ACAGCAAGAAACCTCGGCTGGACGTGACGAGGGCCACCAACAAGCAGATGAGGGAAGAGGACCAGGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | GACGGTTCAGCTCATTCTTGGCCACGCGTTCTTTCTTaGCCTGAGTCCTCTTGGCGAACTGGTCTTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: DGSAHSWPRVLS*PESSWRTGLPW Trigger: CCATGGAAGACCAGTTCGCCAAGAGGACTCAGGCCAAGAAAGAACGCGTGGCCAAGAATGAGCTGAACCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS GCA 72 bp | TCCTCTTCCCACCTTGGGGCGGCACTCCTTTCTTCTTaGCAGCTAAAGCAGAAGGCCAGGAATGCTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSHLGAALLSS*QLKQKARNAFC Trigger: GCAAAAAGCATTCCTGGCCTTCTGCTTTAGCTGGCAAGAAGAAAGGAGTGCCGCCCCAAGGTGGGAAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CAA 72 bp | TTGTTGGTGGCCCTCGTCACGTCCAGCCGAGGTTTCTaGCTGTTCATGACTCGAAGTAGCTCCAACTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLVALVTSSRGF*LFMTRSSSNWF Trigger: GAACCAGTTGGAGCTACTTCGAGTCATGAACAGCAAGAAACCTCGGCTGGACGTGACGAGGGCCACCAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS TCA 72 bp | CCCTCGTCACGTCCAGCCGAGGTTTCTTGCTGTTCATaGCTCGAAGTAGCTCCAACTGGTTCTTTTTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PSSRPAEVSCCS*LEVAPTGSFSR Trigger: CCGAGAAAAAGAACCAGTTGGAGCTACTTCGAGTCATGAACAGCAAGAAACCTCGGCTGGACGTGACGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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| CDS CCA 72 bp | GGTTTCTTGCTGTTCATGACTCGAAGTAGCTCCAACTaGTTCTTTTTCTCGGCTGCGAAGTCCCCAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GFLLFMTRSSSN*FFFSAAKSPKR Trigger: CCTCTTTGGGGACTTCGCAGCCGAGAAAAAGAACCAGTTGGAGCTACTTCGAGTCATGAACAGCAAGAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072079.9 |
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