Pregenerated sensors for RRP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030888Ensembl transcript IDs: ENSMUST00000033179.14, ENSMUST00000098148.6, ENSMUST00000127738.2
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCGGTCACCTGCGCTTGTAGAGACAGGGCTGAAGTTTAAGGCCTaGGAGTTGGGCTTTGGGTCCTACTCGAGGAGGTCCGGTCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: HRSPALVETGLKFKA*ELGFGSYSRRSGLF Trigger: GAAAAGACCGGACCTCCTCGAGTAGGACCCAAAGCCCAACTCTCAGGCCTTAAACTTCAGCCCTGTCTCTACAAGCGCAGGTGACCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR TCA 90 bp | CTACAGATTCATCCTCCAGAGGCACCTGGGCCATGTCACATACTGTaGCCCTGGGGTCCAGAGAAGCCAAATCAAAACAGTGCACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: LQIHPPEAPGPCHIL*PWGPEKPNQNSAQG Trigger: ACCCTGTGCACTGTTTTGATTTGGCTTCTCTGGACCCCAGGGTCACAGTATGTGACATGGCCCAGGTGCCTCTGGAGGATGAATCTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR GCA 90 bp | TCACATACTGTGACCCTGGGGTCCAGAGAAGCCAAATCAAAACAGTaGACAGGGTTCCGGACACTTGAAGCTAGGCGGCAATCTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: SHTVTLGSREAKSKQ*TGFRTLEARRQSPQ Trigger: CTGTGGAGATTGCCGCCTAGCTTCAAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGCTTCTCTGGACCCCAGGGTCACAGTATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR TCA 90 bp | GTAAACAAGCCTATATGCCTGGTTTCAAGGCAGACGCCTCCTGAATaGGCTCAGTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGC | + |
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Preference number: 1 (lower is better) Translates to: VNKPICLVSRQTPPE*AQCVNLAHLPSALR Trigger: GCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACACTGAGCTCATTCAGGAGGCGTCTGCCTTGAAACCAGGCATATAGGCTTGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR CCA 90 bp | CTGAGCTGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTaGTACCAGATCCTGGCTCATAGCCTGGGTAGATACAGTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LSWRLYHSVLGTEGG*YQILAHSLGRYSLQ Trigger: CTGAAGACTGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCAGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR TCA 90 bp | AGTCGTAAACAAGCCTATATGCCTGGTTTCAAGGCAGACGCCTCCTaGATGAGCTCAGTGTGTCAACCTAGCTCACCTTCCCTCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: SRKQAYMPGFKADAS*MSSVCQPSSPSLST Trigger: AGTGCTGAGGGAAGGTGAGCTAGGTTGACACACTGAGCTCATTCAGGAGGCGTCTGCCTTGAAACCAGGCATATAGGCTTGTTTACGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR GCA 90 bp | AGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACGTaGCTTCTGAGAGATGAAGAGAAAGCAAACCCAGAGATCCATCAG | + |
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Preference number: 1 (lower is better) Translates to: RWTILVRRQHSGEPT*LLRDEEKANPEIHQ Trigger: CTGATGGATCTCTGGGTTTGCTTTCTCTTCATCTCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CCA 90 bp | TGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGAGCAGAGGTaGACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACGTGC | + |
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Preference number: 1 (lower is better) Translates to: CSLEAEGAETMDEQR*TILVRRQHSGEPTC Trigger: GCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR TCA 90 bp | CAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACGTGCCTTCTaGGAGATGAAGAGAAAGCAAACCCAGAGATCCATCAGTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QYWSEDNTAESPRAF*EMKRKQTQRSISSQ Trigger: CTGAGAACTGATGGATCTCTGGGTTTGCTTTCTCTTCATCTCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR GCA 90 bp | CCCATGCCTGTGTTCCCAATAATCAGGAGGCTGAGGCAGGAGGATTaGCATTTGTTTTGTTTGAGGTCAGCTTGGACTAGTGTGAGATAC | + |
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Preference number: 1 (lower is better) Translates to: PMPVFPIIRRLRQED*HLFCLRSAWTSVRY Trigger: GTATCTCACACTAGTCCAAGCTGACCTCAAACAAAACAAATGGCAATCCTCCTGCCTCAGCCTCCTGATTATTGGGAACACAGGCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR TCA 90 bp | TCGATTTGCCTCCTCAAGGAAGTCCCTGATGTTAGTTCCCATCAGTaGAAGGCAAAACACAGCCACATCTACAGATTCATCCTCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: SICLLKEVPDVSSHQ*KAKHSHIYRFILQR Trigger: CCTCTGGAGGATGAATCTGTAGATGTGGCTGTGTTTTGCCTTTCACTGATGGGAACTAACATCAGGGACTTCCTTGAGGAGGCAAATCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR CCA 90 bp | AAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATaGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCG | + |
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Preference number: 1 (lower is better) Translates to: KNCLSVVLKLKEQKL*MSRGGQYWSEDNTA Trigger: CGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR TCA 90 bp | TCAGCACCTCTTACTAGTCCCAGCTCTAGCTGTAGCTTTCCTCAGTaGACCCATTTAACATACTGTAAGACAAGAAGGTTACATTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: SAPLTSPSSSCSFPQ*THLTYCKTRRLHFS Trigger: TGAAAAATGTAACCTTCTTGTCTTACAGTATGTTAAATGGGTTCACTGAGGAAAGCTACAGCTAGAGCTGGGACTAGTAAGAGGTGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGAGCGGAGAGCCCACGTaGCTTCTGAGAGATGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: PKWQTSIGTCHKAKTACLSGEPT*LLRDEE Trigger: CTCTTCATCTCTCAGAAGGCACGTGGGCTCTCCGCT...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CAA 90 bp | GAAGCTGAAGGAGCAGAAACTATGGATGAGCAGAGGTGGACAATATaGGTCAGAAGACAACACAGCGGAGAGCCCACGTGCCTTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: EAEGAETMDEQRWTI*VRRQHSGEPTCLLR Trigger: TCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR-3UTR TCA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGAGCCCACGTGCCTTCTaGGAGATGAAGAGAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PKWQTSIGTCHKAKTACLSPRAF*EMKRKQ Trigger: TTGCTTTCTCTTCATCTCTCAGAAGGCACGTGGGCT...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR-3UTR TCA 90 bp | GTCCTTGTAGATAATCTTAAAGCCGAGTTTGGTCACAGCCCCCAAAAAGGTCCGCCATGTCACATACTGTaGCCCTGGGGTCCAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VLVDNLKAEFGHSPQKGPPCHIL*PWGPEK Trigger: CTTCTCTGGACCCCAGGGTCACAGTATGTGACATGG...CGGACCTTTTTGGGGGCTGTGACCAAACTCGGCTTTAAGATTATCTACAAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR-3UTR CCA 90 bp | GTACCTGTAGTTTTCCTAGGACACACAGACTGTGCCAATAAGCAGCCCAATCAGACTCCCAGCCCCAAGTaGCAAACTAGCATTGGGACC | + |
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Preference number: 2 (lower is better) Translates to: VPVVFLGHTDCANKQPNQTPSPK*QTSIGT Trigger: GGTCCCAATGCTAGTTTGCCACTTGGGGCTGGGAGT...CTGATTGGGCTGCTTATTGGCACAGTCTGTGTGTCCTAGGAAAACTACAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR TCA 90 bp | ACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACGTGCCTTCTGAGAGATCAGTCTTCAGAGTTCTaGGACTGGAGTCTGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TILVRRQHSGEPTCLLRDQSSEF*DWSLSS Trigger: AGAGCTCAGACTCCAGTCTCAGAACTCTGAAGACTG...ATCTCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTCCGGTCTTTTCAAAGTCAAACAAGAAGAAGTGGCTGTTGGTCAGGTCCGTTAGTTCCCATCAGTaGAAGGCAAAACACAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: GGPVFSKSNKKKWLLVRSVSSHQ*KAKHSH Trigger: GTGGCTGTGTTTTGCCTTTCACTGATGGGAACTAAC...GGACCTGACCAACAGCCACTTCTTCTTGTTTGACTTTGAAAAGACCGGACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCAAAGCGGCTGCTGACTTCAGCTACTTTGAGAAGACCCCCTGTTTTTAGCGCCAAATCAAAACAGTaGACAGGGTTCCGGACACTT | + |
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Preference number: 2 (lower is better) Translates to: SSKRLLTSATLRRPPVFSAKSKQ*TGFRTL Trigger: AAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGC...GCTAAAAACAGGGGGTCTTCTCAAAGTAGCTGAAGTCAGCAGCCGCTTTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR-3UTR CCA 90 bp | GGACCTGCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAAGAGTAGAGCTGAGCTaGAGGCTTTACCACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GPAIRQKLPVCSLEAEGARVELS*RLYHSV Trigger: AACACTGTGGTAAAGCCTCCAGCTCAGCTCTACTCT...TGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGCAGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CAA 90 bp | CCTGTGTTCCCAATAATCAGGAGGCTGAGGCAGGAGGATTGCCATTaGTTTTGTTTGAGGTCAGCTTGGACTAGTGTGAGATACTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PVFPIIRRLRQEDCH*FCLRSAWTSVRYCL Trigger: GAGACAGTATCTCACACTAGTCCAAGCTGACCTCAAACAAAACAAATGGCAATCCTCCTGCCTCAGCCTCCTGATTATTGGGAACACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR TCA 90 bp | GCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTCAGTCTTCAGAGTTCTaGGACTGGAGTCTGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: AIRQKLPVCSLEAEGAETQSSEF*DWSLSS Trigger: AGAGCTCAGACTCCAGTCTCAGAACTCTGAAGACTG...AGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR-3UTR TCA 90 bp | GTACCTGTAGTTTTCCTAGGACACACAGACTGTGCCAATAAGCAGCCCAATCAGGCCATTTGTTTTGTTTaGGGTCAGCTTGGACTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VPVVFLGHTDCANKQPNQAICFV*GQLGLV Trigger: CACTAGTCCAAGCTGACCTCAAACAAAACAAATGGC...CTGATTGGGCTGCTTATTGGCACAGTCTGTGTGTCCTAGGAAAACTACAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGAGAGGTGGACAATATTaGTCAGAAGACAACACAGCG | + |
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Preference number: 2 (lower is better) Translates to: GKNCLSVVLKLKEQKLWMRGGQY*SEDNTA Trigger: CGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCT...CATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CAA 90 bp | CCAATAATCAGGAGGCTGAGGCAGGAGGATTGCCATTTGTTTTGTTaGAGGTCAGCTTGGACTAGTGTGAGATACTGTCTCAAAACAACA | + |
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Preference number: 2 (lower is better) Translates to: PIIRRLRQEDCHLFC*RSAWTSVRYCLKTT Trigger: TGTTGTTTTGAGACAGTATCTCACACTAGTCCAAGCTGACCTCAAACAAAACAAATGGCAATCCTCCTGCCTCAGCCTCCTGATTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR GCA 90 bp | CGTTTACATGCCTATATCAAACTCCCCCAGTCTTTCTCGGTCACATCTACATTACTGAGGCAGGAGGATTaGCATTTGTTTTGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RLHAYIKLPQSFSVTSTLLRQED*HLFCLR Trigger: CCTCAAACAAAACAAATGGCAATCCTCCTGCCTCAG...TAATGTAGATGTGACCGAGAAAGACTGGGGGAGTTTGATATAGGCATGTAAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR GCA 90 bp | GAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGCCCAAGTAATTTTATaGTTTCTGTATCCAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ETMDEQRWTILVRRQHSGAQVIL*FLYPRR Trigger: CCTTCTTGGATACAGAAAGCATAAAATTACTTGGGC...TCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR-3UTR GCA 90 bp | GCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTGCCCAAGTAATTTTATaGTTTCTGTATCCAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AIRQKLPVCSLEAEGAETAQVIL*FLYPRR Trigger: CCTTCTTGGATACAGAAAGCATAAAATTACTTGGGC...AGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR TCA 72 bp | CCTGCGCTTGTAGAGACAGGGCTGAAGTTTAAGGCCTaGGAGTTGGGCTTTGGGTCCTACTCGAGGAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: PALVETGLKFKA*ELGFGSYSRRS Trigger: GGACCTCCTCGAGTAGGACCCAAAGCCCAACTCTCAGGCCTTAAACTTCAGCCCTGTCTCTACAAGCGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR GCA 72 bp | GTGACCCTGGGGTCCAGAGAAGCCAAATCAAAACAGTaGACAGGGTTCCGGACACTTGAAGCTAGGCGGCAA | + |
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Preference number: 3 (lower is better) Translates to: VTLGSREAKSKQ*TGFRTLEARRQ Trigger: TTGCCGCCTAGCTTCAAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGCTTCTCTGGACCCCAGGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR TCA 72 bp | CAAGCCTATATGCCTGGTTTCAAGGCAGACGCCTCCTaGATGAGCTCAGTGTGTCAACCTAGCTCACCTTCC | + |
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Preference number: 3 (lower is better) Translates to: QAYMPGFKADAS*MSSVCQPSSPS Trigger: GGAAGGTGAGCTAGGTTGACACACTGAGCTCATTCAGGAGGCGTCTGCCTTGAAACCAGGCATATAGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR CCA 72 bp | CAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTaGGTAGATACAGTCTTCAGAGTTCTGAGACTGGAG | + |
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Preference number: 3 (lower is better) Translates to: QKEGGTRSWLIA*VDTVFRVLRLE Trigger: CTCCAGTCTCAGAACTCTGAAGACTGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CCA 72 bp | GAGCAGAAACTATGGATGAGCAGAGGTGGACAATATTaGTCAGAAGACAACACAGCGGAGAGCCCACGTGCC | + |
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Preference number: 3 (lower is better) Translates to: EQKLWMSRGGQY*SEDNTAESPRA Trigger: GGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR-3UTR CAA 90 bp | ACTCGAGGAGGTCCGGTCTTTTCAAAGTCAAACAAGAAGAAGTGGCTGTTGGTCCAGGGTTCCGGACACTaGAAGCTAGGCGGCAATCTC | + |
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Preference number: 3 (lower is better) Translates to: TRGGPVFSKSNKKKWLLVQGSGH*KLGGNL Trigger: GAGATTGCCGCCTAGCTTCAAGTGTCCGGAACCCTG...GACCAACAGCCACTTCTTCTTGTTTGACTTTGAAAAGACCGGACCTCCTCGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR TCA 72 bp | ACAACACAGCGGAGAGCCCACGTGCCTTCTGAGAGATaGAGAGAAAGCAAACCCAGAGATCCATCAGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: TTQRRAHVPSER*RESKPRDPSVL Trigger: GAGAACTGATGGATCTCTGGGTTTGCTTTCTCTTCATCTCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CCA 72 bp | AGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTaGTACCAGATCCTGGCTCATAGCCTGGGTAGATAC | + |
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Preference number: 3 (lower is better) Translates to: RLYHSVLGTEGG*YQILAHSLGRY Trigger: GTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CCA 72 bp | GAAGCTGAAGGAGCAGAAACTATGGATGAGCAGAGGTaGACAATATTGGTCAGAAGACAACACAGCGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: EAEGAETMDEQR*TILVRRQHSGE Trigger: CTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR-3UTR CAA 90 bp | AGCTCAGTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTAATCAGTTTCTGCTGTaGAACAGATTCCAGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SSVCQPSSPSLSTTPRTCNQFLL*NRFQLL Trigger: CAGAAGCTGGAATCTGTTCAACAGCAGAAACTGATT...ACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACACTGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR CAA 90 bp | ACTCGAGGAGGTCCGGTCTTTTCAAAGTCAAACAAGAAGAAGTGGCTGTTGGTCCTGACTTCAGCTACTTaGAGAAGACCCCCTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: TRGGPVFSKSNKKKWLLVLTSAT*RRPPVF Trigger: AAAAACAGGGGGTCTTCTCAAAGTAGCTGAAGTCAG...GACCAACAGCCACTTCTTCTTGTTTGACTTTGAAAAGACCGGACCTCCTCGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR GCA 72 bp | GTGTTCCCAATAATCAGGAGGCTGAGGCAGGAGGATTaGCATTTGTTTTGTTTGAGGTCAGCTTGGACTAGT | + |
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Preference number: 3 (lower is better) Translates to: VFPIIRRLRQED*HLFCLRSAWTS Trigger: ACTAGTCCAAGCTGACCTCAAACAAAACAAATGGCAATCCTCCTGCCTCAGCCTCCTGATTATTGGGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR TCA 72 bp | ACTGTGCCAATAAGCAGCCCAATCAGTTTCTGCTGTTaGACAGATTCCAGCTTCTGTATTACCCCCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: TVPISSPISFCC*TDSSFCITPFQ Trigger: TTGGAAGGGGGTAATACAGAAGCTGGAATCTGTTCAACAGCAGAAACTGATTGGGCTGCTTATTGGCACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR TCA 72 bp | CTCCTCAAGGAAGTCCCTGATGTTAGTTCCCATCAGTaGAAGGCAAAACACAGCCACATCTACAGATTCATC | + |
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Preference number: 3 (lower is better) Translates to: LLKEVPDVSSHQ*KAKHSHIYRFI Trigger: GATGAATCTGTAGATGTGGCTGTGTTTTGCCTTTCACTGATGGGAACTAACATCAGGGACTTCCTTGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| 3UTR CCA 72 bp | CTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATaGATGAGCAGAGGTGGACAATATTGGTCAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LSVVLKLKEQKL*MSRGGQYWSED Trigger: GTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CCA 72 bp | AGACACAGTGAGATCAACGACACACATAGCCATAGCTaGTTTATTCAGCACCTCTTACTAGTCCCAGCTCTA | + |
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Preference number: 3 (lower is better) Translates to: RHSEINDTHSHS*FIQHLLLVPAL Trigger: TAGAGCTGGGACTAGTAAGAGGTGCTGAATAAACCAGCTATGGCTATGTGTGTCGTTGATCTCACTGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR-3UTR CAA 90 bp | AACAGATTCCAGCTTCTGTATTACCCCCTTCCAAGGAAAGCTTCAAACACGTTACAGGAGGATTGCCATTaGTTTTGTTTGAGGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NRFQLLYYPLPRKASNTLQEDCH*FCLRSA Trigger: AGCTGACCTCAAACAAAACAAATGGCAATCCTCCTG...TAACGTGTTTGAAGCTTTCCTTGGAAGGGGGTAATACAGAAGCTGGAATCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| 3UTR TCA 72 bp | CTTACTAGTCCCAGCTCTAGCTGTAGCTTTCCTCAGTaGACCCATTTAACATACTGTAAGACAAGAAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LTSPSSSCSFPQ*THLTYCKTRRL Trigger: TAACCTTCTTGTCTTACAGTATGTTAAATGGGTTCACTGAGGAAAGCTACAGCTAGAGCTGGGACTAGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR GCA 90 bp | GCTGAGCTGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGGTTCCGCCACTGCTTaGGGCTCAGGGTGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AELEALPQCSWYRRRVVPGSATA*GSGCVR Trigger: CCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACC...TGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCAGCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGATACAGTCTTCGGCGTCGGGCAGCACTaGTGGGCCCTGAGTACAACT | + |
|
Preference number: 4 (lower is better) Translates to: QKEGGTRSWLIAWVDTVFGVGQH*WALSTT Trigger: AGTTGTACTCAGGGCCCAGCAGTGCTGCCCGACGCC...GAAGACTGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGGTTCCGCCACTGCTTaGGGCTCAGGGTGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRLYHSVLGTEGGWYQILGSATA*GSGCVR Trigger: CCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACC...CAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGGCCTTGGGAGGAGCCTaGTCTGGTGTCTGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKWQTSIGTCHKAKTACLALGGA*SGVWSG Trigger: GCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGC...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGGGAGGGCAACGCGGTaGCGGTGCGCTTGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETMDEQRWTILVRRQHSGGRATR*RCACGW Trigger: CCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCC...TCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | GGACCTGCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCATGCCGGTTCCGCCACTaGTTGCGGCTCAGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPAIRQKLPVCSLEAEGACRFRH*LRLRVC Trigger: ACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCA...TGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGCAGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | GGACCTGCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGCAACGCGGTGGCGGTaGGCTTGTGGCTGGACAACA | + |
|
Preference number: 4 (lower is better) Translates to: GPAIRQKLPVCSLEAEGAATRWR*ACGWTT Trigger: TGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGC...TGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGCAGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | TGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACCAGAGCCCGTAATGTaGCCAAGAGATGGCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WMSRGGQYWSEDNTAESPPEPVM*PRDGGA Trigger: AGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGG...TGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCTGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCACCTCTATGGAAGCCTTaGGAGGAGCCTGCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AELEALPQCSWYRRRVVPPLWKP*EEPALV Trigger: CACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGG...TGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCAGCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGAGTCGGGCAGCACTGCTaGGCCCTGAGTACAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEGGWYQILAHSLGRVGQHC*ALSTTV Trigger: AACAGTTGTACTCAGGGCCCAGCAGTGCTGCCCGAC...TCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | TTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGATACAGCCTCAGGGTCTTCCTaGAATAGGCGTCGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQKEGGTRSWLIAWVDTASGSS*NRRRAA Trigger: TGCTGCCCGACGCCTATTCCAGGAAGACCCTGAGGC...TGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCCTCAGGGTCTTCCTaGAATAGGCGTCGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WRLYHSVLGTEGGWYQILASGSS*NRRRAA Trigger: TGCTGCCCGACGCCTATTCCAGGAAGACCCTGAGGC...CAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCTGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGTGGCGGTGCGCTTGTaGCTGGACAACACAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AELEALPQCSWYRRRVVPVAVRL*LDNTEN Trigger: GTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCAC...TGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCAGCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | TGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCAGACATTTTCACTCAGTaGCGGGAGGGCAACGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WMSRGGQYWSEDNTAESPDIFTQ*REGNAV Trigger: CACCGCGTTGCCCTCCCGGCACTGAGTGAAAATGTC...TGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | GCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTGTCCCGGGGTCTCTGTaGCGGGACGCTGCTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AIRQKLPVCSLEAEGAETVPGSL*RDAAMD Trigger: GTCCATAGCAGCGTCCCGGCACAGAGACCCCGGGAC...AGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR TCA 90 bp | TTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGATACACCATGTCACATACTGTaGCCCTGGGGTCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQKEGGTRSWLIAWVDTPCHIL*PWGPEK Trigger: CTTCTCTGGACCCCAGGGTCACAGTATGTGACATGG...TGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR TCA 90 bp | GCTGAGCTGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCACTGAAGTTTAAGGCCTaGGAGTTGGGCTTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AELEALPQCSWYRRRVVPLKFKA*ELGFGS Trigger: GGACCCAAAGCCCAACTCTCAGGCCTTAAACTTCAG...TGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCAGCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | GGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGTGCCGGTTCCGCCACTaGTTGCGGCTCAGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKNCLSVVLKLKEQKLWMCRFRH*LRLRVC Trigger: ACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCA...CATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | GCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTGGCGTCGGGCAGCACTaGTGGGCCCTGAGTACAACT | + |
|
Preference number: 4 (lower is better) Translates to: AIRQKLPVCSLEAEGAETGVGQH*WALSTT Trigger: AGTTGTACTCAGGGCCCAGCAGTGCTGCCCGACGCC...AGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | TGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCAGGCAATACGGTCCACTaGGTGCAGTGGCCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WMSRGGQYWSEDNTAESPGNTVH*VQWPLL Trigger: AAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCC...TGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCCGAGTTTGGTCACAGCCCCCAAAAAGGTCCGAATATCCTCAAAGCGGCTGGCAATACGGTCCACTaGGTGCAGTGGCCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAEFGHSPQKGPNILKAAGNTVH*VQWPLL Trigger: AAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCC...AGCCGCTTTGAGGATATTCGGACCTTTTTGGGGGCTGTGACCAAACTCGGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCAGTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTCTGAGAGTTGGGCTTTaGGTCCTACTCGAGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVCQPSSPSLSTTPRTCLRVGL*VLLEEV Trigger: GACCTCCTCGAGTAGGACCCAAAGCCCAACTCTCAG...ACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACACTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| 3UTR CAA 72 bp | GGAGCAGAAACTATGGATGAGCAGAGGTGGACAATATaGGTCAGAAGACAACACAGCGGAGAGCCCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAETMDEQRWTI*VRRQHSGEPTC Trigger: GCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR TCA 90 bp | TGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGCTGAAGTTTAAGGCCTaGGAGTTGGGCTTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRLYHSVLGTEGGWYQILLKFKA*ELGFGS Trigger: GGACCCAAAGCCCAACTCTCAGGCCTTAAACTTCAG...CAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGATACAGTCTTCATACGGTCCACTGGGTaGAGTGGCCACTTCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: QKEGGTRSWLIAWVDTVFIRSTG*SGHFFT Trigger: AGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTAT...GAAGACTGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGTCTGTGCCGGGACGCTaGTATGGACGACATTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKWQTSIGTCHKAKTACLSVPGR*YGRHFH Trigger: GTGAAAATGTCGTCCATAGCAGCGTCCCGGCACAGA...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | CAGAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGCCAGAGCCCGTAATGTaGCCAAGAGATGGCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKLWMSRGGQYWSEDNTAPEPVM*PRDGGA Trigger: AGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGG...CGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GGACCTGCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAAGGCTGGGGGTTTGTTaGGAGAGAGATGCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPAIRQKLPVCSLEAEGARLGVC*ERDAAS Trigger: GGAAGCAGCATCTCTCTCCCAACAAACCCCCAGCCT...TGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGCAGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | TTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGATACACTTCCTTTGAGACGCTaGCAAGTGAGGGCCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVQKEGGTRSWLIAWVDTLPLRR*QVRAFG Trigger: TCCAAAGGCCCTCACTTGCCAGCGTCTCAAAGGAAG...TGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGCTTCCTTTGAGACGCTaGCAAGTGAGGGCCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKWQTSIGTCHKAKTACLLPLRR*QVRAFG Trigger: TCCAAAGGCCCTCACTTGCCAGCGTCTCAAAGGAAG...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCCTGCTCTGGTGTCTaGAGTGGCCGAAATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WRLYHSVLGTEGGWYQILACSGV*SGRNLF Trigger: GAACAAATTTCGGCCACTCCAGACACCAGAGCAGGC...CAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTATATTCGTCGGGCAGCACTGCTaGGCCCTGAGTACAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCQPSSPSLSTTPRTCIFVGQHC*ALSTTV Trigger: AACAGTTGTACTCAGGGCCCAGCAGTGCTGCCCGAC...GAATATACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR TCA 90 bp | GCTGAGCTGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGTTAGTTCCCATCAGTaGAAGGCAAAACACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AELEALPQCSWYRRRVVPVSSHQ*KAKHSH Trigger: GTGGCTGTGTTTTGCCTTTCACTGATGGGAACTAAC...TGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCAGCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | GTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGAGCCAAATCAAAACAGTaGACAGGGTTCCGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEGGWYQILAHSLGRAKSKQ*TGFRTL Trigger: AAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGC...TCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGATACAGTCTTCCATAGACTCAGGGCTTaGCTTGGATGGGTCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKEGGTRSWLIAWVDTVFHRLRA*LGWVNC Trigger: ACAATTGACCCATCCAAGCCAAGCCCTGAGTCTATG...GAAGACTGTATCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGGTCCACTGGGTGCAGTaGCCACTTCTTTACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKWQTSIGTCHKAKTACLVHWVQ*PLLYLS Trigger: AGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGAC...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | ACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACGTGCCTTCTGAGAGATGCCGGGACGCTGCTATaGACGACATTTTCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TILVRRQHSGEPTCLLRDAGTLL*TTFSLS Trigger: ACTGAGTGAAAATGTCGTCCATAGCAGCGTCCCGGC...ATCTCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAAATGTGGCCAAGAGATaGCGGCGCTTGCGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ETMDEQRWTILVRRQHSGNVAKR*RRLRPQ Trigger: CTGTGGACGCAAGCGCCGCCATCTCTTGGCCACATT...TCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR TCA 90 bp | GTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGATGGCGCCTGTTTCTaGCATTTCCCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLVQKEGGTRSWLIAWVDGACF*HFPFLF Trigger: GAAAAGAAAAGGGAAATGTCAGAAACAGGCGCCATC...TACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR GCA 90 bp | GGAGGTCCGGTCTTTTCAAAGTCAAACAAGAAGAAGTGGCTGTTGGTCAGGTCCATACGGTCCACTGGGTaGAGTGGCCACTTCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: GGPVFSKSNKKKWLLVRSIRSTG*SGHFFT Trigger: AGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTAT...GGACCTGACCAACAGCCACTTCTTCTTGTTTGACTTTGAAAAGACCGGACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
||
| CDS-3UTR CCA 90 bp | GCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTAGGCTGGGGGTTTGTTaGGAGAGAGATGCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AIRQKLPVCSLEAEGAETRLGVC*ERDAAS Trigger: GGAAGCAGCATCTCTCTCCCAACAAACCCCCAGCCT...AGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGCATAGACTCAGGGCTTaGCTTGGATGGGTCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKWQTSIGTCHKAKTACLHRLRA*LGWVNC Trigger: ACAATTGACCCATCCAAGCCAAGCCCTGAGTCTATG...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAGCAGAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACCCTCTATGGAAGCCTTaGGAGGAGCCTGCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KEQKLWMSRGGQYWSEDNPLWKP*EEPALV Trigger: CACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGG...GTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | GAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGACCTCAGTCTCCTCTATaGAAGCCTTGGGAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETMDEQRWTILVRRQHSGPQSPL*KPWEEP Trigger: AGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGG...TCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | GAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGGCAATACGGTCCACTaGGTGCAGTGGCCACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETMDEQRWTILVRRQHSGGNTVH*VQWPLL Trigger: AAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCC...TCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | GTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTATCAAACAAGAAGAAGTaGCTGTTGGTCAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLVQKEGGTRSWLIAWVSNKKK*LLVRSL Trigger: CAAGGACCTGACCAACAGCCACTTCTTCTTGTTTGA...TACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | GGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGCTGAGAGTTGGGCTTTaGGTCCTACTCGAGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKNCLSVVLKLKEQKLWMLRVGL*VLLEEV Trigger: GACCTCCTCGAGTAGGACCCAAAGCCCAACTCTCAG...CATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR TCA 90 bp | GGACCTGCCATAAGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCACTCGTCCTGGAATTGTaGACTGTTTGGTCAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPAIRQKLPVCSLEAEGALVLEL*TVWSTL Trigger: CAGTGTTGACCAAACAGTTCACAATTCCAGGACGAG...TGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCTTATGGCAGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR GCA 90 bp | GTACCTGTAGTTTTCCTAGGACACACAGACTGTGCCAATAAGCAGCCCAATCAGATACGGTCCACTGGGTaGAGTGGCCACTTCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: VPVVFLGHTDCANKQPNQIRSTG*SGHFFT Trigger: AGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTAT...CTGATTGGGCTGCTTATTGGCACAGTCTGTGTGTCCTAGGAAAACTACAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS-3UTR CCA 90 bp | AAACTCCCCCAGTCTTTCTCGGTCACATCTACATTACTTATTGCTCAACCGTTAAATGTGGCCAAGAGATaGCGGCGCTTGCGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLPQSFSVTSTLLIAQPLNVAKR*RRLRPL Trigger: CAAGGGACGCAAGCGCCGCCATCTCTTGGCCACATT...TAACGGTTGAGCAATAAGTAATGTAGATGTGACCGAGAAAGACTGGGGGAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR CCA 90 bp | CAGAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGCCTGCTCTGGTGTCTaGAGTGGCCGAAATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKLWMSRGGQYWSEDNTAACSGV*SGRNLF Trigger: GAACAAATTTCGGCCACTCCAGACACCAGAGCAGGC...CGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CCA 90 bp | ACTTTGAGAAGACCCCCTGTTTTTAGCACTCGATTTGCCTCCTCAAGGAAGTCCGTCCACTGGGTGCAGTaGCCACTTCTTTACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRRPPVFSTRFASSRKSVHWVQ*PLLYLS Trigger: AGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGAC...GGACTTCCTTGAGGAGGCAAATCGAGTGCTAAAAACAGGGGGTCTTCTCAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
||
| 3UTR CAA 72 bp | AGGAGGCTGAGGCAGGAGGATTGCCATTTGTTTTGTTaGAGGTCAGCTTGGACTAGTGTGAGATACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLRQEDCHLFC*RSAWTSVRYCL Trigger: GAGACAGTATCTCACACTAGTCCAAGCTGACCTCAAACAAAACAAATGGCAATCCTCCTGCCTCAGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| 3UTR CAA 72 bp | CGAATATCCTCAAAGCGGCTGCTGACTTCAGCTACTTaGAGAAGACCCCCTGTTTTTAGCACTCGATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RISSKRLLTSAT*RRPPVFSTRFA Trigger: GGCAAATCGAGTGCTAAAAACAGGGGGTCTTCTCAAAGTAGCTGAAGTCAGCAGCCGCTTTGAGGATATTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTATATTCCTCGTCCTGGAATTGTaGACTGTTTGGTCAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VCQPSSPSLSTTPRTCIFLVLEL*TVWSTL Trigger: CAGTGTTGACCAAACAGTTCACAATTCCAGGACGAG...GAATATACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR TCA 90 bp | GTACCTGTAGTTTTCCTAGGACACACAGACTGTGCCAATAAGCAGCCCAATCAGGTTAGTTCCCATCAGTaGAAGGCAAAACACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPVVFLGHTDCANKQPNQVSSHQ*KAKHSH Trigger: GTGGCTGTGTTTTGCCTTTCACTGATGGGAACTAAC...CTGATTGGGCTGCTTATTGGCACAGTCTGTGTGTCCTAGGAAAACTACAGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR CCA 90 bp | ACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACGTGCCTTCTGAGAGATAGAGTCACTGATGGATaGCGCCTGTTTCTGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: TILVRRQHSGEPTCLLRDRVTDG*RLFLTF Trigger: AAATGTCAGAAACAGGCGCCATCCATCAGTGACTCT...ATCTCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | GTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGGAGGAGCTTGTCTGTaGCATTTTCTTCTTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLVQKEGGTRSWLIAWVGGACL*HFLLIS Trigger: AGAAATAAGAAGAAAATGCCACAGACAAGCTCCTCC...TACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | AACAGATTCCAGCTTCTGTATTACCCCCTTCCAAGGAAAGCTTCAAACACGTTACCTCAGTCTCCTCTATaGAAGCCTTGGGAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRFQLLYYPLPRKASNTLPQSPL*KPWEEP Trigger: AGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGG...TAACGTGTTTGAAGCTTTCCTTGGAAGGGGGTAATACAGAAGCTGGAATCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS-3UTR CCA 90 bp | AACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGAGCAGAGTCCACTGGGTGCAGTaGCCACTTCTTTACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NCLSVVLKLKEQKLWMSRVHWVQ*PLLYLS Trigger: AGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGAC...TCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | GTGTTCCCAATAATCAGGAGGCTGAGGCAGGAGGATTGCCATTTGTTTTGTTTGTTAAGGCCTGAGAGTTaGGCTTTGGGTCCTACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VFPIIRRLRQEDCHLFCLLRPES*ALGPTR Trigger: TCGAGTAGGACCCAAAGCCCAACTCTCAGGCCTTAA...CAAACAAAACAAATGGCAATCCTCCTGCCTCAGCCTCCTGATTATTGGGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR GCA 90 bp | AGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTATATTCAGTACCTGTAGTGCCAAATCAAAACAGTaGACAGGGTTCCGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSLSTTPRTCIFSTCSAKSKQ*TGFRTL Trigger: AAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGC...ACTACAGGTACTGAATATACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS-3UTR CCA 90 bp | TTTTATGCTTTCTGTATCCAAGAAGGCTCCATTAGAGTAGAGCTGAGCTGGAGGTTAAGGCCTGAGAGTTaGGCTTTGGGTCCTACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FYAFCIQEGSIRVELSWRLRPES*ALGPTR Trigger: TCGAGTAGGACCCAAAGCCCAACTCTCAGGCCTTAA...CCTCCAGCTCAGCTCTACTCTAATGGAGCCTTCTTGGATACAGAAAGCATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| 3UTR CAA 72 bp | GACTGTGCCAATAAGCAGCCCAATCAGTTTCTGCTGTaGAACAGATTCCAGCTTCTGTATTACCCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DCANKQPNQFLL*NRFQLLYYPLP Trigger: TGGAAGGGGGTAATACAGAAGCTGGAATCTGTTCAACAGCAGAAACTGATTGGGCTGCTTATTGGCACAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS-3UTR CCA 90 bp | GAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAAGAGTCACTGATGGATaGCGCCTGTTTCTGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: ETMDEQRWTILVRRQHSGRVTDG*RLFLTF Trigger: AAATGTCAGAAACAGGCGCCATCCATCAGTGACTCT...TCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | GAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGATCAAACAAGAAGAAGTaGCTGTTGGTCAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETMDEQRWTILVRRQHSGSNKKK*LLVRSL Trigger: CAAGGACCTGACCAACAGCCACTTCTTCTTGTTTGA...TCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR TCA 90 bp | AGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGATGGCGCCTGTTTCTaGCATTTCCCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQKLPVCSLEAEGAETMDDGACF*HFPFLF Trigger: GAAAAGAAAAGGGAAATGTCAGAAACAGGCGCCATC...ATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CCA 90 bp | AAGGAGCAGAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACGGAGGAGCTTGTCTGTaGCATTTTCTTCTTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEQKLWMSRGGQYWSEDNGGACL*HFLLIS Trigger: AGAAATAAGAAGAAAATGCCACAGACAAGCTCCTCC...GTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS GCA 90 bp | GGGTCTCTGTGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTaGCGGGAGGGCAACGCGGTGGCGGTGCGCTTGTGGCTGGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GSLCRDAAMDDIFTQ*REGNAVAVRLWLDN Trigger: GTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGTGAAAATGTCGTCCATAGCAGCGTCCCGGCACAGAGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS CCA 90 bp | TGGGAGAGAGATGCTGCTTCCAGAGCCCGTAATGTGGCCAAGAGATaGCGGCGCTTGCGTCCCTTGACTGGCGGGGCAGTCGCCGGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: WERDAASRARNVAKR*RRLRPLTGGAVAGL Trigger: TAGGCCGGCGACTGCCCCGCCAGTCAAGGGACGCAAGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGGAAGCAGCATCTCTCTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS CCA 90 bp | TCACTCAGTGCCGGGAGGGCAACGCGGTGGCGGTGCGCTTGTGGCTaGACAACACAGAGAACGACCTCAATCAGGGGTGAGCTGAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSAGRATRWRCACG*TTQRTTSIRGELKR Trigger: ACGCTTCAGCTCACCCCTGATTGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS GCA 90 bp | TGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCGGTGGCGGTaGGCTTGTGGCTGGACAACACAGAGAACGACCTCAATCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WTTFSLSAGRATRWR*ACGWTTQRTTSIRG Trigger: ACCCCTGATTGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGTGAAAATGTCGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS CCA 90 bp | CTGCTATGGACGACATTTTCACTCAGTGCCGGGAGGGCAACGCGGTaGCGGTGCGCTTGTGGCTGGACAACACAGAGAACGACCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LLWTTFSLSAGRATR*RCACGWTTQRTTSI Trigger: GATTGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGTGAAAATGTCGTCCATAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS TCA 90 bp | GTGCGCTTGTGGCTGGACAACACAGAGAACGACCTCAATCAGGGGTaGGCTGAAGCGTTGGCGAGTGAGACGGCTACAAGTCCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRLWLDNTENDLNQG*AEALASETATSPLS Trigger: GGAGAGAGGACTTGTAGCCGTCTCACTCGCCAACGCTTCAGCTCACCCCTGATTGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS CCA 90 bp | TCCTCCTCCTCCTCAGAGTCACTGCCAGGTAGGCTGGGGGTTTGTTaGGAGAGAGATGCTGCTTCCAGAGCCCGTAATGTGGCCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSESLPGRLGVC*ERDAASRARNVAKR Trigger: TCTCTTGGCCACATTACGGGCTCTGGAAGCAGCATCTCTCTCCCAACAAACCCCCAGCCTACCTGGCAGTGACTCTGAGGAGGAGGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 90 bp | TGGACAACACAGAGAACGACCTCAATCAGGGGTGAGCTGAAGCGTTaGCGAGTGAGACGGCTACAAGTCCTCTCTCCGCTACTCGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTTQRTTSIRGELKR*RVRRLQVLSPLLGV Trigger: CACCCCGAGTAGCGGAGAGAGGACTTGTAGCCGTCTCACTCGCCAACGCTTCAGCTCACCCCTGATTGAGGTCGTTCTCTGTGTTGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS-3UTR CAA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGCGGTTCCGCCACTGCTaGCGGCTCAGGGTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKWQTSIGTCHKAKTACLRFRHC*RLRVCE Trigger: CTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCG...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CAA 90 bp | AGCTCAGTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTGGCCCCATCCAGGCGTaGTGTCATGCGTGCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVCQPSSPSLSTTPRTCGPIQA*CHACSQ Trigger: CTGCGAGCACGCATGACACAACGCCTGGATGGGGCC...ACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACACTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS GCA 90 bp | ACAGGAGGCACCTCAGTCTCCTCTATGGAAGCCTTGGGAGGAGCCTaGTCTGGTGTCTGGAGTGGCCGAAATTTGTTCTTGTGTCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TGGTSVSSMEALGGA*SGVWSGRNLFLCLR Trigger: GCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGGTGCCTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 90 bp | TGGGGGTTTGTTGGGAGAGAGATGCTGCTTCCAGAGCCCGTAATGTaGCCAAGAGATGGCGGCGCTTGCGTCCACAGAGAGTCATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WGFVGREMLLPEPVM*PRDGGACVHRESFS Trigger: AGAGAATGACTCTCTGTGGACGCAAGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGGAAGCAGCATCTCTCTCCCAACAAACCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | ACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCACGTGCCTTCTGAGAGATGGCCCCATCCAGGCGTaGTGTCATGCGTGCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TILVRRQHSGEPTCLLRDGPIQA*CHACSQ Trigger: CTGCGAGCACGCATGACACAACGCCTGGATGGGGCC...ATCTCTCAGAAGGCACGTGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 90 bp | CAATCTCCACAGCCAAAGTCAGCTACCACTAAGGATGCAGGCTTCTaGCGGAGATCTTTGGCAATACGGTCCACTGGGTGCAGTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSPQPKSATTKDAGF*RRSLAIRSTGCSGH Trigger: GTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCTGCATCCTTAGTGGTAGCTGACTTTGGCTGTGGAGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | GTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGACAGGGTTCCGGACACTaGAAGCTAGGCGGCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGTEGGWYQILAHSLGRQGSGH*KLGGNL Trigger: GAGATTGCCGCCTAGCTTCAAGTGTCCGGAACCCTG...TCTACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS GCA 90 bp | GTCTGGAGTGGCCGAAATTTGTTCTTGTGTCTCCGCTTATTTTTCTaGCGGTTCCGCCACTGCTTGCGGCTCAGGGTGTGTGAGGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VWSGRNLFLCLRLFF*RFRHCLRLRVCEEL Trigger: TAACTCCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 90 bp | AGGCACCTCAGTCTCCTCTATGGAAGCCTTGGGAGGAGCCTGCTCTaGTGTCTGGAGTGGCCGAAATTTGTTCTTGTGTCTCCGCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: RHLSLLYGSLGRSLL*CLEWPKFVLVSPLI Trigger: AATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 90 bp | AGGCTTCTGGCGGAGATCTTTGGCAATACGGTCCACTGGGTGCAGTaGCCACTTCTTTACTTGTCTCTGGAAGCCACGGTGATAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLAEIFGNTVHWVQ*PLLYLSLEATVIKE Trigger: CTCCTTTATCACCGTGGCTTCCAGAGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 90 bp | CTACCACTAAGGATGCAGGCCCCCATTACTTCTGGCGGAGATCTTTaGCAATACGGTCCACTGGGTGCAGTGGCCACTTCTTTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLRMQAPITSGGDL*QYGPLGAVATSLLV Trigger: GACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGTAATGGGGGCCTGCATCCTTAGTGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATCGGTTCCGCCACTGCTaGCGGCTCAGGGTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQKLPVCSLEAEGAETMDRFRHC*RLRVCE Trigger: CTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCG...ATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 90 bp | CTCCTCTATGGAAGCCTTGGGAGGAGCCTGCTCTGGTGTCTGGAGTaGCCGAAATTTGTTCTTGTGTCTCCGCTTATTTTTCTGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLYGSLGRSLLWCLE*PKFVLVSPLIFLPV Trigger: AACCGGCAGAAAAATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 90 bp | CAAAGTCAGCTACCACTAAGGATGCAGGCTTCTGGCGGAGATCTTTaGCAATACGGTCCACTGGGTGCAGTGGCCACTTCTTTACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QSQLPLRMQASGGDL*QYGPLGAVATSLLV Trigger: GACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCTGCATCCTTAGTGGTAGCTGACTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | TACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCTCTTCCCTACTTCCTTaGAGACGCTGGCAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YHSVLGTEGGWYQILAHSSSLLP*RRWQVR Trigger: CCTCACTTGCCAGCGTCTCAAAGGAAGTAGGGAAGA...GCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | GTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGGCTCATAGCCTGGGTAGGAATTGTGAACTGTTaGGTCAACACTGTCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFLVQKEGGTRSWLIAWVGIVNC*VNTVQG Trigger: CCCCTGGACAGTGTTGACCAAACAGTTCACAATTCC...TACCCAGGCTATGAGCCAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTATATTCTCCTCTATGGAAGCCTaGGGAGGAGCCTGCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VCQPSSPSLSTTPRTCIFSSMEA*GGACSG Trigger: ACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGA...GAATATACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGTGGCCACTTCTTTACTaGTCTCTGGAAGCCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WRLYHSVLGTEGGWYQILWPLLY*SLEATV Trigger: CACCGTGGCTTCCAGAGACAAGTAAAGAAGTGGCCA...CAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 90 bp | TCAGTCTCCTCTATGGAAGCCTTGGGAGGAGCCTGCTCTGGTGTCTaGAGTGGCCGAAATTTGTTCTTGTGTCTCCGCTTATTTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSMEALGGACSGV*SGRNLFLCLRLFFC Trigger: GCAGAAAAATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTGGCAAACTAGCATTGGGACCTGCCATAAGGCAAAAACTGCCTGTCTGGGAATTGTGAACTGTTaGGTCAACACTGTCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKWQTSIGTCHKAKTACLGIVNC*VNTVQG Trigger: CCCCTGGACAGTGTTGACCAAACAGTTCACAATTCC...CAGACAGGCAGTTTTTGCCTTATGGCAGGTCCCAATGCTAGTTTGCCACTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | AACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGAGCAGATCCTCTATGGAAGCCTaGGGAGGAGCCTGCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NCLSVVLKLKEQKLWMSRSSMEA*GGACSG Trigger: ACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGA...TCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS GCA 90 bp | AATTTGTTCTTGTGTCTCCGCTTATTTTTCTGCCGGTTCCGCCACTaGTTGCGGCTCAGGGTGTGTGAGGAGTTAGGTGACATAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLFLCLRLFFCRFRH*LRLRVCEELGDIDS Trigger: TGAGTCTATGTCACCTAACTCCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACACAAGAACAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTATATTCTGGCCACTTCTTTACTaGTCTCTGGAAGCCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCQPSSPSLSTTPRTCIFWPLLY*SLEATV Trigger: CACCGTGGCTTCCAGAGACAAGTAAAGAAGTGGCCA...GAATATACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR CAA 90 bp | AAGGAGCAGAAACTATGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACCAGGGTTCCGGACACTaGAAGCTAGGCGGCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KEQKLWMSRGGQYWSEDNQGSGH*KLGGNL Trigger: GAGATTGCCGCCTAGCTTCAAGTGTCCGGAACCCTG...GTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCATAGTTTCTGCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CAA 90 bp | TGGATGAGCAGAGGTGGACAATATTGGTCAGAAGACAACACAGCGGAGAGCCCAATCTTAAAGCCGAGTTaGGTCACAGCCCCCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WMSRGGQYWSEDNTAESPILKPS*VTAPKK Trigger: CTTTTTGGGGGCTGTGACCAAACTCGGCTTTAAGAT...TGGGCTCTCCGCTGTGTTGTCTTCTGACCAATATTGTCCACCTCTGCTCATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCTTTACCACAGTGTTCTTGGTACAGAAGGAGGGTGGTACCAGATCCTGATCTTAAAGCCGAGTTaGGTCACAGCCCCCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRLYHSVLGTEGGWYQILILKPS*VTAPKK Trigger: CTTTTTGGGGGCTGTGACCAAACTCGGCTTTAAGAT...CAGGATCTGGTACCACCCTCCTTCTGTACCAAGAACACTGTGGTAAAGCCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS-3UTR CAA 90 bp | TTTTATGCTTTCTGTATCCAAGAAGGCTCCATTAGAGTAGAGCTGAGCTGGAGGCCTGAGAGTTGGGCTTaGGGTCCTACTCGAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FYAFCIQEGSIRVELSWRPESWA*GPTRGG Trigger: ACCTCCTCGAGTAGGACCCAAAGCCCAACTCTCAGG...CCTCCAGCTCAGCTCTACTCTAATGGAGCCTTCTTGGATACAGAAAGCATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS TCA 90 bp | CTTGGCTTGGATGGGTCAATTGTAGCAGTACTCGTCCTGGAATTGTaGACTGTTTGGTCAACACTGTCCAGGGGCTGGGTTAGGTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGLDGSIVAVLVLEL*TVWSTLSRGWVRCK Trigger: TTTACACCTAACCCAGCCCCTGGACAGTGTTGACCAAACAGTTCACAATTCCAGGACGAGTACTGCTACAATTGACCCATCCAAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CAA 90 bp | AACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGAGCAGACTTGACTATCTGACTTaGGGACAGGAGGCACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NCLSVVLKLKEQKLWMSRLDYLT*GQEAPQ Trigger: CTGAGGTGCCTCCTGTCCCAAAGTCAGATAGTCAAG...TCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS-3UTR CAA 90 bp | AAACTCCCCCAGTCTTTCTCGGTCACATCTACATTACTTATTGCTCAACCGTTACCTGAGAGTTGGGCTTaGGGTCCTACTCGAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLPQSFSVTSTLLIAQPLPESWA*GPTRGG Trigger: ACCTCCTCGAGTAGGACCCAAAGCCCAACTCTCAGG...TAACGGTTGAGCAATAAGTAATGTAGATGTGACCGAGAAAGACTGGGGGAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR CAA 90 bp | GGTCACATCTACATTACTTATTGCTCAACCGTTAAGGCAGTAGGGGTGATCAGACTTGACTATCTGACTTaGGGACAGGAGGCACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHIYITYCSTVKAVGVIRLDYLT*GQEAPQ Trigger: CTGAGGTGCCTCCTGTCCCAAAGTCAGATAGTCAAG...TCTGATCACCCCTACTGCCTTAACGGTTGAGCAATAAGTAATGTAGATGTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCAACCTAGCTCACCTTCCCTCAGCACTACGCCAAGAACTTGTATATTCCTGACTTCAGCTACTTaGAGAAGACCCCCTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCQPSSPSLSTTPRTCIFLTSAT*RRPPVF Trigger: AAAAACAGGGGGTCTTCTCAAAGTAGCTGAAGTCAG...GAATATACAAGTTCTTGGCGTAGTGCTGAGGGAAGGTGAGCTAGGTTGACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS-3UTR CAA 90 bp | AACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATGAGCAGACAGAGAGTCATTCTCTaGTCTCTGTTCTCCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NCLSVVLKLKEQKLWMSRQRVIL*SLFSLS Trigger: ACTGAGGGAGAACAGAGACAAGAGAATGACTCTCTG...TCTGCTCATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS-3UTR CAA 90 bp | AGGCAAAAACTGCCTGTCTGTAGTCTTGAAGCTGAAGGAGCAGAAACTATGGATCTGACTTCAGCTACTTaGAGAAGACCCCCTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQKLPVCSLEAEGAETMDLTSAT*RRPPVF Trigger: AAAAACAGGGGGTCTTCTCAAAGTAGCTGAAGTCAG...ATCCATAGTTTCTGCTCCTTCAGCTTCAAGACTACAGACAGGCAGTTTTTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 90 bp | TCCAGAGCCCGTAATGTGGCCAAGAGATGGCGGCGCTTGCGTCCCTaGACTGGCGGGGCAGTCGCCGGCCTAACCTGTGCTGTCGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRARNVAKRWRRLRP*TGGAVAGLTCAVAA Trigger: GGCCGCGACAGCACAGGTTAGGCCGGCGACTGCCCCGCCAGTCAAGGGACGCAAGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS CCA 72 bp | TGTGGCCAAGAGATGGCGGCGCTTGCGTCCCTTGACTaGCGGGGCAGTCGCCGGCCTAACCTGTGCTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CGQEMAALASLD*RGSRRPNLCCR Trigger: GCGACAGCACAGGTTAGGCCGGCGACTGCCCCGCCAGTCAAGGGACGCAAGCGCCGCCATCTCTTGGCCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS GCA 72 bp | TGCCGGGACGCTGCTATGGACGACATTTTCACTCAGTaGCGGGAGGGCAACGCGGTGGCGGTGCGCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRDAAMDDIFTQ*REGNAVAVRLW Trigger: CCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGTGAAAATGTCGTCCATAGCAGCGTCCCGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS CCA 72 bp | GCCGGGAGGGCAACGCGGTGGCGGTGCGCTTGTGGCTaGACAACACAGAGAACGACCTCAATCAGGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGRATRWRCACG*TTQRTTSIRGE Trigger: CTCACCCCTGATTGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS CCA 72 bp | CAGTGCCGGGAGGGCAACGCGGTGGCGGTGCGCTTGTaGCTGGACAACACAGAGAACGACCTCAATCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QCREGNAVAVRL*LDNTENDLNQG Trigger: CCCCTGATTGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS CAA 72 bp | CGTAATGTGGCCAAGAGATGGCGGCGCTTGCGTCCCTaGACTGGCGGGGCAGTCGCCGGCCTAACCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RNVAKRWRRLRP*TGGAVAGLTCA Trigger: AGCACAGGTTAGGCCGGCGACTGCCCCGCCAGTCAAGGGACGCAAGCGCCGCCATCTCTTGGCCACATTACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS CCA 72 bp | GATGCTGCTTCCAGAGCCCGTAATGTGGCCAAGAGATaGCGGCGCTTGCGTCCCTTGACTGGCGGGGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: DAASRARNVAKR*RRLRPLTGGAV Trigger: GACTGCCCCGCCAGTCAAGGGACGCAAGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGGAAGCAGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033179.14 |
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| CDS CAA 90 bp | GTGGCCAAGAGATGGCGGCGCTTGCGTCCACAGAGAGTCATTCTCTaGTCTCTGTTCTCCCTCAGTCCCCCGAGGCTTCCCCAGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VAKRWRRLRPQRVIL*SLFSLSPPRLPQSR Trigger: CCGGGACTGGGGAAGCCTCGGGGGACTGAGGGAGAACAGAGACAAGAGAATGACTCTCTGTGGACGCAAGCGCCGCCATCTCTTGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS CAA 72 bp | GGGACAGGAGGCACCTCAGTCTCCTCTATGGAAGCCTaGGGAGGAGCCTGCTCTGGTGTCTGGAGTGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GTGGTSVSSMEA*GGACSGVWSGR Trigger: TCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGGTGCCTCCTGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CAA 72 bp | ACTCAGTGCCGGGAGGGCAACGCGGTGGCGGTGCGCTaGTGGCTGGACAACACAGAGAACGACCTCAATCAG | + |
|
Preference number: 6 (lower is better) Translates to: TQCREGNAVAVR*WLDNTENDLNQ Trigger: CTGATTGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
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| CDS GCA 72 bp | TTTTCACTCAGTGCCGGGAGGGCAACGCGGTGGCGGTaGGCTTGTGGCTGGACAACACAGAGAACGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSLSAGRATRWR*ACGWTTQRTTS Trigger: TGAGGTCGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGTGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS CCA 72 bp | GGACAGGAGGCACCTCAGTCTCCTCTATGGAAGCCTTaGGAGGAGCCTGCTCTGGTGTCTGGAGTGGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GQEAPQSPLWKP*EEPALVSGVAE Trigger: TTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGGTGCCTCCTGTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 72 bp | ACGACATTTTCACTCAGTGCCGGGAGGGCAACGCGGTaGCGGTGCGCTTGTGGCTGGACAACACAGAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: TTFSLSAGRATR*RCACGWTTQRT Trigger: CGTTCTCTGTGTTGTCCAGCCACAAGCGCACCGCCACCGCGTTGCCCTCCCGGCACTGAGTGAAAATGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS GCA 72 bp | GCGAAATCGGGCCCCATCCAGGCGTTGTGTCATGCGTaGTCGCAGGGCTCCAGCTCTAGACTCTTGACTATC | + |
|
Preference number: 6 (lower is better) Translates to: AKSGPIQALCHA*SQGSSSRLLTI Trigger: GATAGTCAAGAGTCTAGAGCTGGAGCCCTGCGAGCACGCATGACACAACGCCTGGATGGGGCCCGATTTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 72 bp | GTTGGGAGAGAGATGCTGCTTCCAGAGCCCGTAATGTaGCCAAGAGATGGCGGCGCTTGCGTCCACAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VGREMLLPEPVM*PRDGGACVHRE Trigger: CTCTCTGTGGACGCAAGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGGAAGCAGCATCTCTCTCCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS CCA 72 bp | TCCTCAGAGTCACTGCCAGGTAGGCTGGGGGTTTGTTaGGAGAGAGATGCTGCTTCCAGAGCCCGTAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSESLPGRLGVC*ERDAASRARNV Trigger: CACATTACGGGCTCTGGAAGCAGCATCTCTCTCCCAACAAACCCCCAGCCTACCTGGCAGTGACTCTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 72 bp | CAGAGAACGACCTCAATCAGGGGTGAGCTGAAGCGTTaGCGAGTGAGACGGCTACAAGTCCTCTCTCCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: QRTTSIRGELKR*RVRRLQVLSPL Trigger: TAGCGGAGAGAGGACTTGTAGCCGTCTCACTCGCCAACGCTTCAGCTCACCCCTGATTGAGGTCGTTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS CCA 72 bp | GATGCTGCTTCCAGAGCCCGTAATGTGGCCAAGAGATaGCGGCGCTTGCGTCCACAGAGAGTCATTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DAASRARNVAKR*RRLRPQRVILL Trigger: CAAGAGAATGACTCTCTGTGGACGCAAGCGCCGCCATCTCTTGGCCACATTACGGGCTCTGGAAGCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS CAA 72 bp | TTCATTAAGGTAGCGAAATCGGGCCCCATCCAGGCGTaGTGTCATGCGTGCTCGCAGGGCTCCAGCTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: FIKVAKSGPIQA*CHACSQGSSSR Trigger: TCTAGAGCTGGAGCCCTGCGAGCACGCATGACACAACGCCTGGATGGGGCCCGATTTCGCTACCTTAATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CAA 72 bp | GCTACCACTAAGGATGCAGGCTTCTGGCGGAGATCTTaGGCAATACGGTCCACTGGGTGCAGTGGCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ATTKDAGFWRRS*AIRSTGCSGHF Trigger: GAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCTGCATCCTTAGTGGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CAA 90 bp | GAAGCCTTGGGAGGAGCCTGCTCTGGTGTCTGGAGTGGCCGAAATTaGTTCTTGTGTCTCCGCTTATTTTTCTGCCGGTTCCGCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: EALGGACSGVWSGRN*FLCLRLFFCRFRHC Trigger: GCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS TCA 72 bp | TGGCTGGACAACACAGAGAACGACCTCAATCAGGGGTaGGCTGAAGCGTTGGCGAGTGAGACGGCTACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WLDNTENDLNQG*AEALASETATS Trigger: ACTTGTAGCCGTCTCACTCGCCAACGCTTCAGCTCACCCCTGATTGAGGTCGTTCTCTGTGTTGTCCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098148.6 |
||
| CDS GCA 72 bp | TTGTGTCTCCGCTTATTTTTCTGCCGGTTCCGCCACTaGTTGCGGCTCAGGGTGTGTGAGGAGTTAGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LCLRLFFCRFRH*LRLRVCEELGD Trigger: GTCACCTAACTCCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 72 bp | GCGGAGATCTTTGGCAATACGGTCCACTGGGTGCAGTaGCCACTTCTTTACTTGTCTCTGGAAGCCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AEIFGNTVHWVQ*PLLYLSLEATV Trigger: CACCGTGGCTTCCAGAGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
||
| CDS CCA 72 bp | CTACCACTAAGGATGCAGGCTTCTGGCGGAGATCTTTaGCAATACGGTCCACTGGGTGCAGTGGCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPLRMQASGGDL*QYGPLGAVATS Trigger: AGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCTGCATCCTTAGTGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 72 bp | TCAGCTACCACTAAGGATGCAGGCCCCCATTACTTCTaGCGGAGATCTTTGGCAATACGGTCCACTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SATTKDAGPHYF*RRSLAIRSTGC Trigger: GCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGTAATGGGGGCCTGCATCCTTAGTGGTAGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| CDS CAA 90 bp | GTACAACTGTTCATTAAGGTAGCGAAATCGGGCCCCATCCAGGCGTaGTGTCATGCGTGCTCGCAGGGCTCCAGCTCTAGACTCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: VQLFIKVAKSGPIQA*CHACSQGSSSRLLT Trigger: AGTCAAGAGTCTAGAGCTGGAGCCCTGCGAGCACGCATGACACAACGCCTGGATGGGGCCCGATTTCGCTACCTTAATGAACAGTTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS GCA 72 bp | GGCCGAAATTTGTTCTTGTGTCTCCGCTTATTTTTCTaGCGGTTCCGCCACTGCTTGCGGCTCAGGGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: GRNLFLCLRLFF*RFRHCLRLRVC Trigger: ACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACACAAGAACAAATTTCGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS GCA 72 bp | ACCTCAGTCTCCTCTATGGAAGCCTTGGGAGGAGCCTaGTCTGGTGTCTGGAGTGGCCGAAATTTGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TSVSSMEALGGA*SGVWSGRNLFL Trigger: CAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 72 bp | TGTCTCCGCTTATTTTTCTGCCGGTTCCGCCACTGCTaGCGGCTCAGGGTGTGTGAGGAGTTAGGTGACATA | + |
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Preference number: 6 (lower is better) Translates to: CLRLFFCRFRHC*RLRVCEELGDI Trigger: TATGTCACCTAACTCCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 90 bp | TTGTTCTTGTGTCTCCGCTTATTTTTCTGCCGGTTCCGCCACTGCTaGCGGCTCAGGGTGTGTGAGGAGTTAGGTGACATAGACTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LFLCLRLFFCRFRHC*RLRVCEELGDIDSG Trigger: CCCTGAGTCTATGTCACCTAACTCCTCACACACCCTGAGCCGCAAGCAGTGGCGGAACCGGCAGAAAAATAAGCGGAGACACAAGAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 90 bp | GCTACCACTAAGGATGCAGGCCCCCATTACTTCTGGCGGAGATCTTaGGCAATACGGTCCACTGGGTGCAGTGGCCACTTCTTTACTTGT | + |
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Preference number: 6 (lower is better) Translates to: ATTKDAGPHYFWRRS*AIRSTGCSGHFFTC Trigger: ACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGTAATGGGGGCCTGCATCCTTAGTGGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127738.2 |
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| CDS GCA 72 bp | TTCTGGCGGAGATCTTTGGCAATACGGTCCACTGGGTaGAGTGGCCACTTCTTTACTTGTCTCTGGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: FWRRSLAIRSTG*SGHFFTCLWKP Trigger: TGGCTTCCAGAGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 72 bp | TCTATGGAAGCCTTGGGAGGAGCCTGCTCTGGTGTCTaGAGTGGCCGAAATTTGTTCTTGTGTCTCCGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SMEALGGACSGV*SGRNLFLCLRL Trigger: TAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 72 bp | AGTCTCCTCTATGGAAGCCTTGGGAGGAGCCTGCTCTaGTGTCTGGAGTGGCCGAAATTTGTTCTTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLLYGSLGRSLL*CLEWPKFVLVS Trigger: AGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCCATAGAGGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 72 bp | AGGCTTCTGGCGGAGATCTTTGGCAATACGGTCCACTaGGTGCAGTGGCCACTTCTTTACTTGTCTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RLLAEIFGNTVH*VQWPLLYLSLE Trigger: TTCCAGAGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 72 bp | GGAGGAGCCTGCTCTGGTGTCTGGAGTGGCCGAAATTaGTTCTTGTGTCTCCGCTTATTTTTCTGCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GGACSGVWSGRN*FLCLRLFFCRF Trigger: GAACCGGCAGAAAAATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 90 bp | CCAAAGTCAGCTACCACTAAGGATGCAGGCTTCTGGCGGAGATCTTaGGCAATACGGTCCACTGGGTGCAGTGGCCACTTCTTTACTTGT | + |
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Preference number: 6 (lower is better) Translates to: PKSATTKDAGFWRRS*AIRSTGCSGHFFTC Trigger: ACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGATCTCCGCCAGAAGCCTGCATCCTTAGTGGTAGCTGACTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 90 bp | GGTCCAGAGAAGCCAAATCAAAACAGTGCACAGGGTTCCGGACACTaGAAGCTAGGCGGCAATCTCCACAGCCAAAGTCAGCTACCACTA | + |
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Preference number: 6 (lower is better) Translates to: GPEKPNQNSAQGSGH*KLGGNLHSQSQLPL Trigger: TAGTGGTAGCTGACTTTGGCTGTGGAGATTGCCGCCTAGCTTCAAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGCTTCTCTGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 90 bp | ATCTTTGGCAATACGGTCCACTGGGTGCAGTGGCCACTTCTTTACTaGTCTCTGGAAGCCACGGTGATAAAGGAGAAAAGCCTCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: IFGNTVHWVQWPLLY*SLEATVIKEKSLRV Trigger: GACCCTGAGGCTTTTCTCCTTTATCACCGTGGCTTCCAGAGACAAGTAAAGAAGTGGCCACTGCACCCAGTGGACCGTATTGCCAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CCA 72 bp | GGAAGCCTTGGGAGGAGCCTGCTCTGGTGTCTGGAGTaGCCGAAATTTGTTCTTGTGTCTCCGCTTATTTTT | + |
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Preference number: 6 (lower is better) Translates to: GSLGRSLLWCLE*PKFVLVSPLIF Trigger: AAAAATAAGCGGAGACACAAGAACAAATTTCGGCCACTCCAGACACCAGAGCAGGCTCCTCCCAAGGCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 72 bp | AAGCCAAATCAAAACAGTGCACAGGGTTCCGGACACTaGAAGCTAGGCGGCAATCTCCACAGCCAAAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: KPNQNSAQGSGH*KLGGNLHSQSQ Trigger: CTGACTTTGGCTGTGGAGATTGCCGCCTAGCTTCAAGTGTCCGGAACCCTGTGCACTGTTTTGATTTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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| CDS CAA 72 bp | TGTGAGGAGTTAGGTGACATAGACTCAGGGCTTGGCTaGGATGGGTCAATTGTAGCAGTACTCGTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: CEELGDIDSGLG*DGSIVAVLVLE Trigger: TTCCAGGACGAGTACTGCTACAATTGACCCATCCAAGCCAAGCCCTGAGTCTATGTCACCTAACTCCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033179.14 ENSMUST00000098148.6 |
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