Pregenerated sensors for RRP7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018040Ensembl transcript IDs: ENSMUST00000018184.10, ENSMUST00000166019.2, ENSMUST00000166766.2, ENSMUST00000167483.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCAAGGAGGGTATGAGCGAGCCCTGCTTGGCAGAGCCCAGAGCTaGAGCTGGACTGTGCTCTGGGGAGGGTCTGCAGGGGGCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: SQGGYERALLGRAQS*SWTVLWGGSAGGSS Trigger: TGAGGAGCCCCCTGCAGACCCTCCCCAGAGCACAGTCCAGCTGCAGCTCTGGGCTCTGCCAAGCAGGGCTCGCTCATACCCTCCTTGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR TCA 90 bp | ACCCCAACTTCTCGCTGCCCAGAGCGCTGCAGGGGTACTACGATGTaGGGCGGGCGAATGATGCAGACAAGGCGCCTATGCACTTCATGG | + |
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Preference number: 1 (lower is better) Translates to: TPTSRCPERCRGTTM*GGRMMQTRRLCTSW Trigger: CCATGAAGTGCATAGGCGCCTTGTCTGCATCATTCGCCCGCCTCACATCGTAGTACCCCTGCAGCGCTCTGGGCAGCGAGAAGTTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR GCA 90 bp | AGAGTTTCACGTGGAAGCAGTCTCAAGGAGGGTATGAGCGAGCCCTaGTTGGCAGAGCCCAGAGCTGCAGCTGGACTGTGCTCTGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: RVSRGSSLKEGMSEP*LAEPRAAAGLCSGE Trigger: CTCCCCAGAGCACAGTCCAGCTGCAGCTCTGGGCTCTGCCAAGCAGGGCTCGCTCATACCCTCCTTGAGACTGCTTCCACGTGAAACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | GCTGGGGATCCCTACACAGGGCCTGATGCTCTCACAAAGCGGGAGTaGGGCTCTCTATTTGGCAAGCTCCTGCAGTACCCTGCCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: AGDPYTGPDALTKRE*GSLFGKLLQYPACL Trigger: AAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCACTCCCGCTTTGTGAGAGCATCAGGCCCTGTGTAGGGATCCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR GCA 90 bp | GTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCACGCTTaGCAGATGGTGAGCCAGGTATCCTGGGAGTGTCTTTCTAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: VPSGCCQEGLHGGHA*QMVSQVSWECLSRQ Trigger: CTGCCTAGAAAGACACTCCCAGGATACCTGGCTCACCATCTGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR CCA 90 bp | CCATCTTCACTGAGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATaGAGGGCACGCTTGCCAGATGGTGAGCCAGGTATCCTGGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: PSSLSSKWLLSGGAA*RARLPDGEPGILGV Trigger: CACTCCCAGGATACCTGGCTCACCATCTGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAGTGAAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR CCA 90 bp | TCAAGGCAAACCTCAACTCAAAACCATGGGAGTGGCTGGGCACGGTaGCTCACACCTAACTCAGGACTAGGGAGAGCATGGCCGCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SRQTSTQNHGSGWAR*LTPNSGLGRAWPRW Trigger: CCAGCGCGGCCATGCTCTCCCTAGTCCTGAGTTAGGTGTGAGCCACCGTGCCCAGCCACTCCCATGGTTTTGAGTTGAGGTTTGCCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR GCA 90 bp | GGAGCCCGGCACGAGGTGTCCAGTTCTCCCAGTGGGACATTCCGCTaGTCAATCGGCCTTTCTCAGGAAACATCTTTGTCAGCAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: GARHEVSSSPSGTFR*SIGLSQETSLSAGA Trigger: AGCACCTGCTGACAAAGATGTTTCCTGAGAAAGGCCGATTGAGCAGCGGAATGTCCCACTGGGAGAACTGGACACCTCGTGCCGGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | TGCCAGGCTGTAGCTCTGGGATCCTGTGCACTTTCTAGCTTCCACTaGATCTCGAGCACTCTCGTCCCACAAAACAGGTGGAGTGGGCGG | + |
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Preference number: 1 (lower is better) Translates to: CQAVALGSCALSSFH*ISSTLVPQNRWSGR Trigger: CCGCCCACTCCACCTGTTTTGTGGGACGAGAGTGCTCGAGATCCAGTGGAAGCTAGAAAGTGCACAGGATCCCAGAGCTACAGCCTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR TCA 90 bp | TGGTCCAAAACAGAGTTTCACGTGGAAGCAGTCTCAAGGAGGGTATaGGCGAGCCCTGCTTGGCAGAGCCCAGAGCTGCAGCTGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: WSKTEFHVEAVSRRV*ASPAWQSPELQLDC Trigger: ACAGTCCAGCTGCAGCTCTGGGCTCTGCCAAGCAGGGCTCGCTCATACCCTCCTTGAGACTGCTTCCACGTGAAACTCTGTTTTGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR GCA 90 bp | AGCTCTGTGAAGGCCAAATCCTCCTCCAAGGCAGCCTTGCGTCGGTaGAGAGATGGAAGTGTGGGAACAGCTACTTCCTGGCCTGGTATC | + |
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Preference number: 1 (lower is better) Translates to: SSVKAKSSSKAALRR*RDGSVGTATSWPGI Trigger: GATACCAGGCCAGGAAGTAGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGGAGGATTTGGCCTTCACAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR GCA 90 bp | AAAGCGGGAGTGGGGCTCTCTATTTGGCAAGCTCCTGCAGTACCCTaGCTGCCTTTGTGGGCTTTATCTCGAACAGAACCAGCAGTGACC | + |
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Preference number: 1 (lower is better) Translates to: KAGVGLSIWQAPAVP*LPLWALSRTEPAVT Trigger: GGTCACTGCTGGTTCTGTTCGAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCACTCCCGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | AATCCTCCTCCAAGGCAGCCTTGCGTCGGTGCAGAGATGGAAGTGTaGGAACAGCTACTTCCTGGCCTGGTATCTGCTTGTCAGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: NPPPRQPCVGAEMEV*EQLLPGLVSACQNS Trigger: GCTGTTCTGACAAGCAGATACCAGGCCAGGAAGTAGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGGAGGATT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR TCA 90 bp | TGTGGCCTTGCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTaGGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: CGLATSGGNKISHLH*VPSGCCQEGLHGGH Trigger: GTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR TCA 90 bp | CAGAGTGTGCTTTATAGGAACTGCACAGGCAGTCTTGGGAGCTCGTaGATAAGGCCCGCTTGGTTAGGAAAGATGGCCCTCTTGGTGCGC | + |
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Preference number: 1 (lower is better) Translates to: QSVLYRNCTGSLGSS*IRPAWLGKMALLVR Trigger: GCGCACCAAGAGGGCCATCTTTCCTAACCAAGCGGGCCTTATTCACGAGCTCCCAAGACTGCCTGTGCAGTTCCTATAAAGCACACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR TCA 90 bp | CCTGCACTTGCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTaGGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: PALATSGGNKISHLH*VPSGCCQEGLHGGH Trigger: GTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166766.2 |
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| 3UTR CCA 90 bp | GGGCTCTCTATTTGGCAAGCTCCTGCAGTACCCTGCCTGCCTTTGTaGGCTTTATCTCGAACAGAACCAGCAGTGACCCTGACTGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: GLSIWQAPAVPCLPL*ALSRTEPAVTLTVA Trigger: AGCTACAGTCAGGGTCACTGCTGGTTCTGTTCGAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | AACAGCAAGAACGGAGCAGGCAGGGCTAGGTGGAGACACAGGCTGTaGTCCAAAACAGAGTTTCACGTGGAAGCAGTCTCAAGGAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: NSKNGAGRARWRHRL*SKTEFHVEAVSRRV Trigger: TACCCTCCTTGAGACTGCTTCCACGTGAAACTCTGTTTTGGACCACAGCCTGTGTCTCCACCTAGCCCTGCCTGCTCCGTTCTTGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | CTTCATACATCAAGGCAAACCTCAACTCAAAACCATGGGAGTGGCTaGGCACGGTGGCTCACACCTAACTCAGGACTAGGGAGAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: LHTSRQTSTQNHGSG*ARWLTPNSGLGRAW Trigger: CCATGCTCTCCCTAGTCCTGAGTTAGGTGTGAGCCACCGTGCCCAGCCACTCCCATGGTTTTGAGTTGAGGTTTGCCTTGATGTATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | ACAGCAGGCATATTAAACAGCAAGAACGGAGCAGGCAGGGCTAGGTaGAGACACAGGCTGTGGTCCAAAACAGAGTTTCACGTGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: TAGILNSKNGAGRAR*RHRLWSKTEFHVEA Trigger: TGCTTCCACGTGAAACTCTGTTTTGGACCACAGCCTGTGTCTCCACCTAGCCCTGCCTGCTCCGTTCTTGCTGTTTAATATGCCTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | GACGGGTTGGGTACATGTCAGCTCTTAGCCCCACTTAAATTCCTTTaGATTTCCTGGGTTGGCACCACTCCAGATCCAAAGAGCAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: DGLGTCQLLAPLKFL*ISWVGTTPDPKSRQ Trigger: TTGCCTGCTCTTTGGATCTGGAGTGGTGCCAACCCAGGAAATCCAAAGGAATTTAAGTGGGGCTAAGAGCTGACATGTACCCAACCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR GCA 90 bp | GTGGGCTTTATCTCGAACAGAACCAGCAGTGACCCTGACTGTAGCTaGCCCGGTGTAATATATACACAGCTCAGATACCTACATTTCCGT | + |
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Preference number: 1 (lower is better) Translates to: VGFISNRTSSDPDCS*PGVIYTQLRYLHFR Trigger: ACGGAAATGTAGGTATCTGAGCTGTGTATATATTACACCGGGGCAGCTACAGTCAGGGTCACTGCTGGTTCTGTTCGAGATAAAGCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR TCA 90 bp | GCCAGCTGGCCAGCAAACTCCAAAGATCTACCTAATCTTGCCTCTTaGCAACAGCTGAGATTACAAATGTCGCACAGATGCCCAGTTGTA | + |
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Preference number: 1 (lower is better) Translates to: ASWPANSKDLPNLAS*QQLRLQMSHRCPVV Trigger: TACAACTGGGCATCTGTGCGACATTTGTAATCTCAGCTGTTGTCAAGAGGCAAGATTAGGTAGATCTTTGGAGTTTGCTGGCCAGCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CCA 90 bp | GGCTACACCACTAGCCAGACTGGACAGATTAACTCCGATGATCAGTaGGGTCACAGCAGGATTGTCTACACATCCAAGAATTCTGAACTA | + |
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Preference number: 1 (lower is better) Translates to: GYTTSQTGQINSDDQ*GHSRIVYTSKNSEL Trigger: TAGTTCAGAATTCTTGGATGTGTAGACAATCCTGCTGTGACCCCACTGATCATCGGAGTTAATCTGTCCAGTCTGGCTAGTGGTGTAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTGGACATTGGCCTCCTGGGCTGGGTGACCCAGCCGGCCTCACTGGGACCCGCTGGCGGGAAGTCTaGGCCAAGGCTGCTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LGGHWPPGLGDPAGLTGTRWREV*AKAAGL Trigger: CAGACCAGCAGCCTTGGCTCAGACTTCCCGCCAGCG...GGTCCCAGTGAGGCCGGCTGGGTCACCCAGCCCAGGAGGCCAATGTCCACCAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCTGCAGCTGGACTGTGCTCTGGGGAGGGTCTGCAGGGGGCTCCTCAGCCCCTCCATTGCTTCTCTaGCTCCAACACCCACACCCA | + |
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Preference number: 2 (lower is better) Translates to: QSCSWTVLWGGSAGGSSAPPLLL*LQHPHP Trigger: TGGGTGTGGGTGTTGGAGGCAGAGAAGCAATGGAGG...GGCTGAGGAGCCCCCTGCAGACCCTCCCCAGAGCACAGTCCAGCTGCAGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCCTAACCCCTGGCCAGGCCTAATTCTGAGGTGCATCTCCCAGAAGCAGGTTGTCAGGAGGGGCTaGATGGAGGGCACGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: PSPNPWPGLILRCISQKQVVRRG*MEGTLA Trigger: GGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAAC...CTGCTTCTGGGAGATGCACCTCAGAATTAGGCCTGGCCAGGGGTTAGGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCCTAATTACCCTGCCTGCAGGAGCACGTGGGGCTTCGTGGCAAGGGTTGCAGAGGCAGCTCTGTaGAGGCCAAATCCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SCPNYPACRSTWGFVARVAEAAL*RPNPPP Trigger: TGGAGGAGGATTTGGCCTTCACAGAGCTGCCTCTGC...AACCCTTGCCACGAAGCCCCACGTGCTCCTGCAGGCAGGGTAATTAGGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCACGCTTGCCAGCAGAGGCAGCTCTGTaGAGGCCAAATCCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSSKWLLSGGAAWRARLPAEAAL*RPNPPP Trigger: TGGAGGAGGATTTGGCCTTCACAGAGCTGCCTCTGC...TGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCTGCAGCTGGACTGTGCTCTGGGGAGGGTCTGCAGGGGGCTCCTCAGCCGCCAGAGAACAGCTTTaGCTTCGTAAGCAAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: QSCSWTVLWGGSAGGSSAAREQL*LRKQGD Trigger: ATCTCCTTGCTTACGAAGTCAAAGCTGTTCTCTGGC...GGCTGAGGAGCCCCCTGCAGACCCTCCCCAGAGCACAGTCCAGCTGCAGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCACGCTTGCCGCAGCCTTGCGTCGGTaGAGAGATGGAAGTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TEFQVAVVRRGCMEGTLAAALRR*RDGSVG Trigger: TCCCACACTTCCATCTCTGCACCGACGCAAGGCTGC...GGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCTGCAGGGGGCTCCTCAGCCCTGAGGGTCCCAAAGTAACCTCCATTGCTCCTCCAAGGCAGCCTTaGGTCGGTGCAGAGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: RVCRGLLSPEGPKVTSIAPPRQP*VGAEME Trigger: TTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGG...AGCAATGGAGGTTACTTTGGGACCCTCAGGGCTGAGGAGCCCCCTGCAGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCTGCAGGGGGCTCCTCAGCCCTGAGGGTCCCAAAGTAACCTCCATTGCTAGTGGGCGGGAGTCTTaGAGACCAAGAGAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RVCRGLLSPEGPKVTSIASGRES*RPREAA Trigger: TGCTGCCTCTCTTGGTCTGCAAGACTCCCGCCCACT...AGCAATGGAGGTTACTTTGGGACCCTCAGGGCTGAGGAGCCCCCTGCAGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CAA 90 bp | GGCAGAGGCAGCTCTGTGAAGGCCAAATCCTCCTCCAAGGCAGCCTaGCGTCGGTGCAGAGATGGAAGTGTGGGAACAGCTACTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GRGSSVKAKSSSKAA*RRCRDGSVGTATSW Trigger: CCAGGAAGTAGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGGAGGATTTGGCCTTCACAGAGCTGCCTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAGCCAGGTATCCTGGGAGTGTCTTTCTAGGCAGGAGAGGGCAGAGGCAGCTGCAGCCTTGCGTCGGTaGAGAGATGGAAGTGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VSQVSWECLSRQERAEAAAALRR*RDGSVG Trigger: TCCCACACTTCCATCTCTGCACCGACGCAAGGCTGC...AGCTGCCTCTGCCCTCTCCTGCCTAGAAAGACACTCCCAGGATACCTGGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCTGCAGGGGGCTCCTCAGCCCTGAGGGTCCCAAAGTAACCTCCATTGCTGCTCCTGCAGTACCCTaGCTGCCTTTGTGGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RVCRGLLSPEGPKVTSIAAPAVP*LPLWAL Trigger: TAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGC...AGCAATGGAGGTTACTTTGGGACCCTCAGGGCTGAGGAGCCCCCTGCAGACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGACTCCCTTGTATGTCACGTACAGGTGGAGCACCTGGGGAGAGAGGGGAACGTGGGAAGTGGGCTCTaGGAGACAGCAGGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SDSLVCHVQVEHLGREGNVGSGL*ETAGQR Trigger: TCTCTGCCCTGCTGTCTCCCAGAGCCCACTTCCCAC...GTTCCCCTCTCTCCCCAGGTGCTCCACCTGTACGTGACATACAAGGGAGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCTGCAGGGGGCTCCTCAGCCCTGAGGGTCCCAAAGTAACCTCCATTGCTGTCCCCAGGCTACTGTaGATAGACAAGGTTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RVCRGLLSPEGPKVTSIAVPRLL*IDKVAS Trigger: AGAGGCAACCTTGTCTATTCACAGTAGCCTGGGGAC...AGCAATGGAGGTTACTTTGGGACCCTCAGGGCTGAGGAGCCCCCTGCAGACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCCTAATTACCCTGCCTGCAGGAGCACGTGGGGCTTCGTGGCAAGGGTTACAGAGGATGACTTCTaGCAGGCTGTAGCTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SCPNYPACRSTWGFVARVTEDDF*QAVALG Trigger: TCCCAGAGCTACAGCCTGGCAGAAGTCATCCTCTGT...AACCCTTGCCACGAAGCCCCACGTGCTCCTGCAGGCAGGGTAATTAGGGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCAGTGACCCTGACTGTAGCTGCCCCGGTGTAATATATACACAGCTCAGAACAAGCCCCAGGTGGTaGCCGGAGTCGTCGGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TSSDPDCSCPGVIYTQLRTSPRW*PESSVP Trigger: AGGGACCGACGACTCCGGCCACCACCTGGGGCTTGT...TCTGAGCTGTGTATATATTACACCGGGGCAGCTACAGTCAGGGTCACTGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CAA 90 bp | AGCAGGGCTGGAGCCGACCCTCTGGGCTCTGAGGCTTCTGTGGCCTaGCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SRAGADPLGSEASVA*PPVVEIKSPIFTEF Trigger: GAACTCAGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGGCCACAGAAGCCTCAGAGCCCAGAGGGTCGGCTCCAGCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CAA 90 bp | ACACAGGGCCTGATGCTCTCACAAAGCGGGAGTGGGGCTCTCTATTaGGCAAGCTCCTGCAGTACCCTGCCTGCCTTTGTGGGCTTTATC | + |
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Preference number: 2 (lower is better) Translates to: TQGLMLSQSGSGALY*ASSCSTLPAFVGFI Trigger: GATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCACTCCCGCTTTGTGAGAGCATCAGGCCCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGCTCTCTATTTGGCAAGCTCCTGCAGTACCCTGCCTGCCTTTGTGGGCTATACCTACATTTCCGTaGCAGCCTCCAAGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VGLSIWQAPAVPCLPLWAIPTFP*QPPSPQ Trigger: CTGGGGACTTGGAGGCTGTCACGGAAATGTAGGTAT...AGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTCCACACTGCTGTGAGCCACTCACAGCAGCCATTCAGCCTGTGCTACCGCCCTGCCTGCCTTTGTaGGCTTTATCTCGAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: PSPHCCEPLTAAIQPVLPPCLPL*ALSRTE Trigger: TTCTGTTCGAGATAAAGCCCACAAAGGCAGGCAGGG...CGGTAGCACAGGCTGAATGGCTGCTGTGAGTGGCTCACAGCAGTGTGGAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CAA 90 bp | AAGATTCTGGCCTTATCTGTGACTCTGACAAAGGGCCTGGGGTGTTaGGTGAGCTTTGGTGATGCTAAGGAAGCAGGGCTGGAGCCGACC | + |
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Preference number: 2 (lower is better) Translates to: KILALSVTLTKGLGC*VSFGDAKEAGLEPT Trigger: GGTCGGCTCCAGCCCTGCTTCCTTAGCATCACCAAAGCTCACCAAACACCCCAGGCCCTTTGTCAGAGTCACAGATAAGGCCAGAATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
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| 3UTR CAA 90 bp | GTGGGGCTCTCTATTTGGCAAGCTCCTGCAGTACCCTGCCTGCCTTaGTGGGCTTTATCTCGAACAGAACCAGCAGTGACCCTGACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: VGLSIWQAPAVPCLP*WALSRTEPAVTLTV Trigger: TACAGTCAGGGTCACTGCTGGTTCTGTTCGAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGCCCAGGAGTGAATGTTTTAGATGAGACTGGGTATCAGATACTCACTAGGGGCCTCTTCAGGGCCTaGAGCCAGGCAGGGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSPGVNVLDETGYQILTRGLFRA*SQAGQR Trigger: CCTCTGCCCTGCCTGGCTTCAGGCCCTGAAGAGGCC...CCTAGTGAGTATCTGATACCCAGTCTCATCTAAAACATTCACTCCTGGGCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCAGCCCTGCACTTGCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTTCAGGAGGGGCTGCATaGAGGGCACGCTTGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EAALHLPPVVEIKSPIFTSGGAA*RARLPD Trigger: ATCTGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGA...AGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGTGCAGGGCTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166766.2 |
||
| 3UTR CAA 90 bp | GGTGGGGAGCAGGGTAGGACTTTGATGAATAGAAGCCAGGAAGCTTaGATGAGTAATGACTTGGTGGACATTGGCCTCCTGGGCTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GGEQGRTLMNRSQEA*MSNDLVDIGLLGWV Trigger: CACCCAGCCCAGGAGGCCAATGTCCACCAAGTCATTACTCATCAAAGCTTCCTGGCTTCTATTCATCAAAGTCCTACCCTGCTCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCTCCAACACCCACACCCAGCTATAAAGGGTTCTGTGAGTGGATTCAGTTAACGCTTGCCAGATGGTaGGCCAGGTATCCTGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LPPTPTPSYKGFCEWIQLTLARW*ARYPGS Trigger: ACTCCCAGGATACCTGGCTCACCATCTGGCAAGCGT...TAACTGAATCCACTCACAGAACCCTTTATAGCTGGGTGTGGGTGTTGGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGCAGTGACCCTGACTGTAGCTGCCCCGGTGTAATATATACACAGCTCAGAAGACAAGGTTGCCTCTaGCCACAGGAGTCTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TSSDPDCSCPGVIYTQLRRQGCL*PQESPE Trigger: CTCAGGAGACTCCTGTGGTCAGAGGCAACCTTGTCT...TCTGAGCTGTGTATATATTACACCGGGGCAGCTACAGTCAGGGTCACTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTCTGCAGGGGGCTCCTCAGCCCTGAGGGTCCCAAAGTAACCTCCATTGCTTTCAATGGGTTGTGTTaGAAAGAAAAGCCTGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RVCRGLLSPEGPKVTSIAFNGLC*KEKPGL Trigger: AAGGCCAGGCTTTTCTTTTCAACACAACCCATTGAA...AGCAATGGAGGTTACTTTGGGACCCTCAGGGCTGAGGAGCCCCCTGCAGACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAACAGAGTTTCACGTGGAAGCAGTCTCAAGGAGGGTATGAGCGAGCCCTGCTGCAGTACCCTGCCTaGCTTTGTGGGCTTTATCTC | + |
|
Preference number: 2 (lower is better) Translates to: PKQSFTWKQSQGGYERALLQYPA*LCGLYL Trigger: GAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAG...CAGGGCTCGCTCATACCCTCCTTGAGACTGCTTCCACGTGAAACTCTGTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CAA 90 bp | GCCAGGCCTAATTCTGAGGTGCATCTCCCAGAAGCAGCCCTGCACTaGCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ARPNSEVHLPEAALH*PPVVEIKSPIFTEF Trigger: GAACTCAGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGTGCAGGGCTGCTTCTGGGAGATGCACCTCAGAATTAGGCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166766.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTGAGTTCCAAGTGCCTCCAAGGCAGCCTTaGGTCGGTGCAGAGATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HLPPVVEIKSPIFTEFQVPPRQP*VGAEME Trigger: TTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGG...CACTTGGAACTCAGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166766.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAGCTCTTAGCCCCACTTAAATTCCTTTGGATTTCCTGGGTTGGCACCACTTATTTGGCAAGCTCCTaGAGTACCCTGCCTGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CQLLAPLKFLWISWVGTTYLASS*STLPAF Trigger: AAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATA...AGTGGTGCCAACCCAGGAAATCCAAAGGAATTTAAGTGGGGCTAAGAGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CAA 90 bp | GCAAATCTGAGCCTAGGCTATAGCTGGCCTCAGGGAAGGGGGTGGTaGCCTATATCTGTTCCACTTCAATGGGTTGTGTTGAAAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ANLSLGYSWPQGRGW*PISVPLQWVVLKRK Trigger: TTTTCTTTTCAACACAACCCATTGAAGTGGAACAGATATAGGCAACCACCCCCTTCCCTGAGGCCAGCTATAGCCTAGGCTCAGATTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGTCACAGCAGGATTGTCTACACATCCAAGAATTCTGAACTAGGAACTTTTATCTCCCATCTTCACTaGGTTCCAAGTGGCTGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: WGHSRIVYTSKNSELGTFISHLH*VPSGCC Trigger: ACAACAGCCACTTGGAACTCAGTGAAGATGGGAGAT...AAAAGTTCCTAGTTCAGAATTCTTGGATGTGTAGACAATCCTGCTGTGACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTAGCCCAGGAGTGAATGTTTTAGATGAGACTGGGTATCAGATACTCACTAGGCCACTTAAATTCCTTTaGATTTCCTGGGTTGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: SSPGVNVLDETGYQILTRPLKFL*ISWVGT Trigger: GGTGCCAACCCAGGAAATCCAAAGGAATTTAAGTGG...CCTAGTGAGTATCTGATACCCAGTCTCATCTAAAACATTCACTCCTGGGCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | CTTGGCAGAGCCCAGAGCTGCAGCTGGACTGTGCTCTaGGGAGGGTCTGCAGGGGGCTCCTCAGCCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGRAQSCSWTVL*GGSAGGSSALR Trigger: CCTCAGGGCTGAGGAGCCCCCTGCAGACCCTCCCCAGAGCACAGTCCAGCTGCAGCTCTGGGCTCTGCCAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | GCCTCACTGGGACCCAGCTGCCCTAATTACCCTGCCTaGAGGAGCACGTGGGGCTTCGTGGCAAGGGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ASLGPSCPNYPA*RSTWGFVARVH Trigger: GTGAACCCTTGCCACGAAGCCCCACGTGCTCCTGCAGGCAGGGTAATTAGGGCAGCTGGGTCCCAGTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | GCCAGGACACTTGTCCCAAGGAGGACCCCGCTGAAGTaGGAAGTGGGCTCTGGGAGACAGCAGGGCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARTLVPRRTPLK*EVGSGRQQGRE Trigger: CTCTCTGCCCTGCTGTCTCCCAGAGCCCACTTCCCACTTCAGCGGGGTCCTCCTTGGGACAAGTGTCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| 3UTR TCA 72 bp | TCTCGCTGCCCAGAGCGCTGCAGGGGTACTACGATGTaGGGCGGGCGAATGATGCAGACAAGGCGCCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: SRCPERCRGTTM*GGRMMQTRRLC Trigger: GCATAGGCGCCTTGTCTGCATCATTCGCCCGCCTCACATCGTAGTACCCCTGCAGCGCTCTGGGCAGCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | CCCTCCCCTAACCCCTGGCCAGGCCTAATTCTGAGGTaGATCTCCCAGAAGCAGCCCTGCACTTGCCTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PSPNPWPGLILR*ISQKQPCTCLR Trigger: ACGGAGGCAAGTGCAGGGCTGCTTCTGGGAGATGCACCTCAGAATTAGGCCTGGCCAGGGGTTAGGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | CGTGGAAGCAGTCTCAAGGAGGGTATGAGCGAGCCCTaGTTGGCAGAGCCCAGAGCTGCAGCTGGACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RGSSLKEGMSEP*LAEPRAAAGLC Trigger: GCACAGTCCAGCTGCAGCTCTGGGCTCTGCCAAGCAGGGCTCGCTCATACCCTCCTTGAGACTGCTTCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | CCCTCCCCTAACCCCTGGCCAGGCCTAATTCTGAGGTaGATCTCCCAGAAGCAGCCCTGCACTTGCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSPNPWPGLILR*ISQKQPCTCHQ Trigger: CTGGTGGCAAGTGCAGGGCTGCTTCTGGGAGATGCACCTCAGAATTAGGCCTGGCCAGGGGTTAGGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166766.2 |
||
| 3UTR CCA 72 bp | TGGCGGCCGCTGGCGGGAAGTCTGAGCCAAGGCTGCTaGTCTGCAGTGGTTGTGCTAGGGTGCTTAGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: WRPLAGSLSQGC*SAVVVLGCLAD Trigger: ATCAGCTAAGCACCCTAGCACAACCACTGCAGACCAGCAGCCTTGGCTCAGACTTCCCGCCAGCGGCCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGAGACCAGGGACCTCTAGGAAGGAGCCCGGCACGAGGTGTCCAGTTCTCCTGCACTTGCCTCCGTaGCTCCCAGGACCAGTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TQRPGTSRKEPGTRCPVLLHLPP*LPGPVN Trigger: GTTTACTGGTCCTGGGAGCAACGGAGGCAAGTGCAG...GAGAACTGGACACCTCGTGCCGGGCTCCTTCCTAGAGGTCCCTGGTCTCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | AGGAGGGGCTGCATGGAGGGCACGCTTGCCAGATGGTaGGCCAGGTATCCTGGGAGTGTCTTTCTAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RRGCMEGTLARW*ARYPGSVFLGR Trigger: CCTGCCTAGAAAGACACTCCCAGGATACCTGGCTCACCATCTGGCAAGCGTGCCCTCCATGCAGCCCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| 3UTR TCA 72 bp | CTAAGGAAGCAGGGCTGGAGCCGACCCTCTGGGCTCTaGGGCTTCTGTGGCCTTGCCACCAGTGGTGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LRKQGWSRPSGL*GFCGLATSGGN Trigger: ATTTCCACCACTGGTGGCAAGGCCACAGAAGCCTCAGAGCCCAGAGGGTCGGCTCCAGCCCTGCTTCCTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | GGCTGTTGTCAGGAGGGGCTGCATGGAGGGCACGCTTaGCAGATGGTGAGCCAGGTATCCTGGGAGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GCCQEGLHGGHA*QMVSQVSWECL Trigger: AAGACACTCCCAGGATACCTGGCTCACCATCTGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| 3UTR TCA 72 bp | GAGTCGTCGGTCCCTTCCTACAGGGCCTACAGAGGATaGCTTCTGCCAGGCTGTAGCTCTGGGATCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ESSVPSYRAYRG*LLPGCSSGILC Trigger: GCACAGGATCCCAGAGCTACAGCCTGGCAGAAGTCATCCTCTGTAGGCCCTGTAGGAAGGGACCGACGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | CTGAGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATaGAGGGCACGCTTGCCAGATGGTGAGCCAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LSSKWLLSGGAA*RARLPDGEPGI Trigger: GATACCTGGCTCACCATCTGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| 3UTR CCA 72 bp | GGCCGCGCTGGGGCAAATCTGAGCCTAGGCTATAGCTaGCCTCAGGGAAGGGGGTGGTTGCCTATATCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GRAGANLSLGYS*PQGRGWLPISV Trigger: AACAGATATAGGCAACCACCCCCTTCCCTGAGGCCAGCTATAGCCTAGGCTCAGATTTGCCCCAGCGCGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | AACCCAGTTGGTGTAACTAGTCCTTTCCATGATGCGTaGCGGCCGCTGGCGGGAAGTCTGAGCCAAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NPVGVTSPFHDA*RPLAGSLSQGC Trigger: GCAGCCTTGGCTCAGACTTCCCGCCAGCGGCCGCCACGCATCATGGAAAGGACTAGTTACACCAACTGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | ACAGAGTTTCACGTGGAAGCAGTCTCAAGGAGGGTATaGGCGAGCCCTGCTTGGCAGAGCCCAGAGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TEFHVEAVSRRV*ASPAWQSPELQ Trigger: CTGCAGCTCTGGGCTCTGCCAAGCAGGGCTCGCTCATACCCTCCTTGAGACTGCTTCCACGTGAAACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | CTGCACTTGCCTCCGTTGCTCCCAGGACCAGTAAACTaGCAAGTGTTACTGCTGGGGATCCCTACACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LHLPPLLPGPVN*QVLLLGIPTQG Trigger: GCCCTGTGTAGGGATCCCCAGCAGTAACACTTGTCAGTTTACTGGTCCTGGGAGCAACGGAGGCAAGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | AAGGCCAAATCCTCCTCCAAGGCAGCCTTGCGTCGGTaGAGAGATGGAAGTGTGGGAACAGCTACTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KAKSSSKAALRR*RDGSVGTATSW Trigger: CCAGGAAGTAGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGGAGGATTTGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| 3UTR GCA 72 bp | CGGTCCCTTCCTACAGGGCCTACAGAGGATGACTTCTaGCAGGCTGTAGCTCTGGGATCCTGTGCACTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSLPTGPTEDDF*QAVALGSCALS Trigger: AGAAAGTGCACAGGATCCCAGAGCTACAGCCTGGCAGAAGTCATCCTCTGTAGGCCCTGTAGGAAGGGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | CAAAGCGGGAGTGGGGCTCTCTATTTGGCAAGCTCCTaGAGTACCCTGCCTGCCTTTGTGGGCTTTATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: QSGSGALYLASS*STLPAFVGFIS Trigger: CGAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCACTCCCGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | ATCCTCCTCCAAGGCAGCCTTGCGTCGGTGCAGAGATaGAAGTGTGGGAACAGCTACTTCCTGGCCTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ILLQGSLASVQR*KCGNSYFLAWY Trigger: ATACCAGGCCAGGAAGTAGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| 3UTR CCA 72 bp | CTAATTACCCTGCCTGCAGGAGCACGTGGGGCTTCGTaGCAAGGGTTCACCCTTCACCCTGGTTTTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LITLPAGARGAS*QGFTLHPGFVS Trigger: AGAGACAAAACCAGGGTGAAGGGTGAACCCTTGCCACGAAGCCCCACGTGCTCCTGCAGGCAGGGTAATTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | AGTCCCCAGGCTACTGTGAATAGACAAGGTTGCCTCTaGCCACAGGAGTCTCCTGAGTGGGCGCTATCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SPQATVNRQGCL*PQESPEWALSH Trigger: GTGAGATAGCGCCCACTCAGGAGACTCCTGTGGTCAGAGGCAACCTTGTCTATTCACAGTAGCCTGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | GACAAGTGTTACTGCTGGGGATCCCTACACAGGGCCTaGTGCTCTCACAAAGCGGGAGTGGGGCTCTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: DKCYCWGSLHRA*CSHKAGVGLSI Trigger: AATAGAGAGCCCCACTCCCGCTTTGTGAGAGCATCAGGCCCTGTGTAGGGATCCCCAGCAGTAACACTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | AACGGAGCAGGCAGGGCTAGGTGGAGACACAGGCTGTaGTCCAAAACAGAGTTTCACGTGGAAGCAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NGAGRARWRHRL*SKTEFHVEAVS Trigger: TGAGACTGCTTCCACGTGAAACTCTGTTTTGGACCACAGCCTGTGTCTCCACCTAGCCCTGCCTGCTCCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | CATTTCCGTGACAGCCTCCAAGTCCCCAGGCTACTGTaGATAGACAAGGTTGCCTCTGACCACAGGAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HFRDSLQVPRLL*IDKVASDHRSL Trigger: GAGACTCCTGTGGTCAGAGGCAACCTTGTCTATTCACAGTAGCCTGGGGACTTGGAGGCTGTCACGGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | AGCCTGTCTGTGATGACCGACTCCATGTCCTCGAGCTaGGAGCAGAGTGTGCTTTATAGGAACTGCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSVMTDSMSSS*EQSVLYRNCTG Trigger: GCCTGTGCAGTTCCTATAAAGCACACTCTGCTCTCAGCTCGAGGACATGGAGTCGGTCATCACAGACAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | GTGGGGCTCTCTATTTGGCAAGCTCCTGCAGTACCCTaGCTGCCTTTGTGGGCTTTATCTCGAACAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VGLSIWQAPAVP*LPLWALSRTEP Trigger: TGGTTCTGTTCGAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | GTAGCTCTGGGATCCTGTGCACTTTCTAGCTTCCACTaGATCTCGAGCACTCTCGTCCCACAAAACAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VALGSCALSSFH*ISSTLVPQNRW Trigger: CCACCTGTTTTGTGGGACGAGAGTGCTCGAGATCCAGTGGAAGCTAGAAAGTGCACAGGATCCCAGAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | ATTTGGCAAGCTCCTGCAGTACCCTGCCTGCCTTTGTaGGCTTTATCTCGAACAGAACCAGCAGTGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IWQAPAVPCLPL*ALSRTEPAVTL Trigger: CAGGGTCACTGCTGGTTCTGTTCGAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | CTGAGCCTAGGCTATAGCTGGCCTCAGGGAAGGGGGTaGTTGCCTATATCTGTTCCACTTCAATGGGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLGYSWPQGRG*LPISVPLQWVV Trigger: CACAACCCATTGAAGTGGAACAGATATAGGCAACCACCCCCTTCCCTGAGGCCAGCTATAGCCTAGGCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGCCCTGCACTTGCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTAGTTCCAAGTGGCTGTaGTCAGGAGGGGCTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: EAALHLPPVVEIKSPIFTSSKWL*SGGAAW Trigger: CCATGCAGCCCCTCCTGACAACAGCCACTTGGAACT...AGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGTGCAGGGCTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166766.2 |
||
| 3UTR TCA 72 bp | CTTCAATGGGTTGTGTTGAAAAGAAAAGCCTGGCCTTaGGACTCGGGTCAGATCCCAGCCCAGCGGACAATG | + |
|
Preference number: 3 (lower is better) Translates to: LQWVVLKRKAWP*DSGQIPAQRTM Trigger: CATTGTCCGCTGGGCTGGGATCTGACCCGAGTCTCAAGGCCAGGCTTTTCTTTTCAACACAACCCATTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | CTTTATAGGAACTGCACAGGCAGTCTTGGGAGCTCGTaGATAAGGCCCGCTTGGTTAGGAAAGATGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LYRNCTGSLGSS*IRPAWLGKMAL Trigger: GAGGGCCATCTTTCCTAACCAAGCGGGCCTTATTCACGAGCTCCCAAGACTGCCTGTGCAGTTCCTATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | GATGAGACTGGGTATCAGATACTCACTAGGACCCAGTaGTATCTACCACTGACCTACATCCTCAGCCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: DETGYQILTRTQ*YLPLTYILSPP Trigger: CGGTGGGCTGAGGATGTAGGTCAGTGGTAGATAGCACTGGGTCCTAGTGAGTATCTGATACCCAGTCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | GCCACCAGTGGTGGAAATAAAATCTCCCATCTTCACTaGGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ATSGGNKISHLH*VPSGCCQEGLH Trigger: ATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAGTGAAGATGGGAGATTTTATTTCCACCACTGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| 3UTR TCA 72 bp | CCCAGCTATAAAGGGTTCTGTGAGTGGATTCAGTTATaGTCCCAACAAGAAGGAAGAATGGCTGGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PSYKGFCEWIQL*SQQEGRMAGEG Trigger: CCCCTCCCCAGCCATTCTTCCTTCTTGTTGGGATCATAACTGAATCCACTCACAGAACCCTTTATAGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | CAGCTCTTAGCCCCACTTAAATTCCTTTGGATTTCCTaGGTTGGCACCACTCCAGATCCAAAGAGCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QLLAPLKFLWIS*VGTTPDPKSRQ Trigger: TTGCCTGCTCTTTGGATCTGGAGTGGTGCCAACCCAGGAAATCCAAAGGAATTTAAGTGGGGCTAAGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR GCA 72 bp | ATCTCGAACAGAACCAGCAGTGACCCTGACTGTAGCTaGCCCGGTGTAATATATACACAGCTCAGATACCTA | + |
|
Preference number: 3 (lower is better) Translates to: ISNRTSSDPDCS*PGVIYTQLRYL Trigger: TAGGTATCTGAGCTGTGTATATATTACACCGGGGCAGCTACAGTCAGGGTCACTGCTGGTTCTGTTCGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CCA 72 bp | ACTAGCCAGACTGGACAGATTAACTCCGATGATCAGTaGGGTCACAGCAGGATTGTCTACACATCCAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSQTGQINSDDQ*GHSRIVYTSKN Trigger: ATTCTTGGATGTGTAGACAATCCTGCTGTGACCCCACTGATCATCGGAGTTAATCTGTCCAGTCTGGCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGCCCAGGAGTGAATGTTTTAGATGAGACTGGGTATCAGATACTCACTAGGTTGATGAGTAATGACTaGGTGGACATTGGCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSPGVNVLDETGYQILTRLMSND*VDIGLL Trigger: CAGGAGGCCAATGTCCACCAAGTCATTACTCATCAA...CCTAGTGAGTATCTGATACCCAGTCTCATCTAAAACATTCACTCCTGGGCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAGCTCTTAGCCCCACTTAAATTCCTTTGGATTTCCTGGGTTGGCACCACTCAGGAGAGACAGCATTaGGTGGAAGAATTTTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: CQLLAPLKFLWISWVGTTQERQH*VEEFYY Trigger: GTAATAAAATTCTTCCACCAAATGCTGTCTCTCCTG...AGTGGTGCCAACCCAGGAAATCCAAAGGAATTTAAGTGGGGCTAAGAGCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | TGTAATATATACACAGCTCAGATACCTACATTTCCGTaGCAGCCTCCAAGTCCCCAGGCTACTGTGAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: CNIYTAQIPTFP*QPPSPQATVNR Trigger: TCTATTCACAGTAGCCTGGGGACTTGGAGGCTGTCACGGAAATGTAGGTATCTGAGCTGTGTATATATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | CCAGCAAACTCCAAAGATCTACCTAATCTTGCCTCTTaGCAACAGCTGAGATTACAAATGTCGCACAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: PANSKDLPNLAS*QQLRLQMSHRC Trigger: GCATCTGTGCGACATTTGTAATCTCAGCTGTTGTCAAGAGGCAAGATTAGGTAGATCTTTGGAGTTTGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR TCA 72 bp | CCAAAGATCTACCTAATCTTGCCTCTTGACAACAGCTaGGATTACAAATGTCGCACAGATGCCCAGTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PKIYLILPLDNS*DYKCRTDAQLY Trigger: ATACAACTGGGCATCTGTGCGACATTTGTAATCTCAGCTGTTGTCAAGAGGCAAGATTAGGTAGATCTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR TCA 90 bp | ACTTGTCCCAAGGAGGACCCCGCTGAAGTGGGAAGTGGGCTCTGGGAGACAGCACCCAGCCCCTTCCCCTaGCTCCAGTGGAACCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCPKEDPAEVGSGLWETAPSPFP*LQWNLV Trigger: CACCAGGTTCCACTGGAGTCAGGGGAAGGGGCTGGG...TGCTGTCTCCCAGAGCCCACTTCCCACTTCAGCGGGGTCCTCCTTGGGACAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCCAAGGAGGACCCCGCTGAAGTGGGAAGTGGGCTCTGGGAGACAGCAGGATCGGGAGGCCATGTaGACTGGGTGCCTTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVPRRTPLKWEVGSGRQQDREAM*TGCLGE Trigger: TTCGCCAAGGCACCCAGTCCACATGGCCTCCCGATC...CTGCTGTCTCCCAGAGCCCACTTCCCACTTCAGCGGGGTCCTCCTTGGGACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCACGCTTGCCACGCAGCTGTGCCAGGTaGTCCATCTTGGTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSKWLLSGGAAWRARLPRSCAR*SILVSR Trigger: CCGAGAGACCAAGATGGAGCACCTGGCACAGCTGCG...TGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTCTGCAGGGGGCTCCTCAGCCCTGAGGGTCCCAAAGTAACCTCCATTGCTGATCGGGAGGCCATGTaGACTGGGTGCCTTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVCRGLLSPEGPKVTSIADREAM*TGCLGE Trigger: TTCGCCAAGGCACCCAGTCCACATGGCCTCCCGATC...AGCAATGGAGGTTACTTTGGGACCCTCAGGGCTGAGGAGCCCCCTGCAGACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCCTAATTACCCTGCCTGCAGGAGCACGTGGGGCTTCGTGGCAAGGGTTCCAGGTGCTCCATCTTaGTCTCTCGGTGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCPNYPACRSTWGFVARVPGAPS*SLGAAR Trigger: CCTGGCAGCACCGAGAGACCAAGATGGAGCACCTGG...AACCCTTGCCACGAAGCCCCACGTGCTCCTGCAGGCAGGGTAATTAGGGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCACGCTTGCCACCAGGTGCTCCATCTTaGTCTCTCGGTGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSKWLLSGGAAWRARLPPGAPS*SLGAAR Trigger: CCTGGCAGCACCGAGAGACCAAGATGGAGCACCTGG...TGGCAAGCGTGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTTGCGTCGGTGCAGAGATGGAAGTGTGGGAACAGCTACTTCCTGGCCTGGGCCAGGCATAGAAGTTaGGCAGCTCCTTGCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLASVQRWKCGNSYFLAWARHRS*AAPCGH Trigger: GTGCCCGCAAGGAGCTGCTCAACTTCTATGCCTGGC...CCAGGCCAGGAAGTAGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTGCGTCGGTGCAGAGATGGAAGTGTGGGAACAGCTACTTCCTGGCCTGGCCAGGCATAGAAGTTaGGCAGCTCCTTGCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPCVGAEMEVWEQLLPGLARHRS*AAPCGH Trigger: GTGCCCGCAAGGAGCTGCTCAACTTCTATGCCTGGC...CAGGCCAGGAAGTAGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGTATCCTGGGAGTGTCTTTCTAGGCAGGAGAGGGCAGAGGCAGCTCTGCGCAGCTGTGCCAGGTaGTCCATCTTGGTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVSWECLSRQERAEAALRSCAR*SILVSR Trigger: CCGAGAGACCAAGATGGAGCACCTGGCACAGCTGCG...CAGAGCTGCCTCTGCCCTCTCCTGCCTAGAAAGACACTCCCAGGATACCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGAGGGGAACAGGAAGAAGGCTCCTAGAGCCAGGACACTTGTCCCAAGGAAGGTCGGGCTTCTCCTaGAGCTCCACTGTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GERGTGRRLLEPGHLSQGRSGFS*SSTVLM Trigger: CATCAAGACAGTGGAGCTGCAGGAGAAGCCCGACCT...TCCTTGGGACAAGTGTCCTGGCTCTAGGAGCCTTCTTCCTGTTCCCCTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS-3UTR CCA 90 bp | GCGGACAATGGCTCTCCCTCTCCACACTGCTGTGAGCCACTCACAGCAGCCATTCCGCTCTTCACAAGGTaGCTCTCTGTAGAAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADNGSPSPHCCEPLTAAIPLFTR*LSVETS Trigger: GCTGGTTTCTACAGAGAGCCACCTTGTGAAGAGCGG...AATGGCTGCTGTGAGTGGCTCACAGCAGTGTGGAGAGGGAGAGCCATTGTCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CAA 72 bp | AGCTCTGTGAAGGCCAAATCCTCCTCCAAGGCAGCCTaGCGTCGGTGCAGAGATGGAAGTGTGGGAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVKAKSSSKAA*RRCRDGSVGTA Trigger: AGCTGTTCCCACACTTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGGAGGATTTGGCCTTCACAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166766.2 |
||
| 3UTR CAA 72 bp | CTGATGCTCTCACAAAGCGGGAGTGGGGCTCTCTATTaGGCAAGCTCCTGCAGTACCCTGCCTGCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LMLSQSGSGALY*ASSCSTLPAFV Trigger: CACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGAGAGCCCCACTCCCGCTTTGTGAGAGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGTATCCTGGGAGTGTCTTTCTAGGCAGGAGAGGGCAGAGGCAGCTCTGTGTAGAAACCAGCAATaGGCCCTTCAGGTTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQVSWECLSRQERAEAALCRNQQ*ALQVQG Trigger: GCCTTGAACCTGAAGGGCCCATTGCTGGTTTCTACA...CAGAGCTGCCTCTGCCCTCTCCTGCCTAGAAAGACACTCCCAGGATACCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR GCA 90 bp | AGGGTCTGCAGGGGGCTCCTCAGCCCTGAGGGTCCCAAAGTAACCTCCATTGCTATAGGCCTCCATGAATaGGTCTACTTCCATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVCRGLLSPEGPKVTSIAIGLHE*VYFHSQ Trigger: CTGAGAATGGAAGTAGACGCATTCATGGAGGCCTAT...AGCAATGGAGGTTACTTTGGGACCCTCAGGGCTGAGGAGCCCCCTGCAGACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCCAAGGAGGACCCCGCTGAAGTGGGAAGTGGGCTCTGGGAGACAGCAGACACATTACAGAGACTaGTATAGGGAATGGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPRRTPLKWEVGSGRQQTHYRD*YREWSL Trigger: GAGAGACCATTCCCTATAGCAGTCTCTGTAATGTGT...CTGCTGTCTCCCAGAGCCCACTTCCCACTTCAGCGGGGTCCTCCTTGGGACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| 3UTR CAA 72 bp | GCCTTATCTGTGACTCTGACAAAGGGCCTGGGGTGTTaGGTGAGCTTTGGTGATGCTAAGGAAGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSVTLTKGLGC*VSFGDAKEAGL Trigger: CAGCCCTGCTTCCTTAGCATCACCAAAGCTCACCAAACACCCCAGGCCCTTTGTCAGAGTCACAGATAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR TCA 90 bp | CCATCTTCACTGAGTTCCAAGTGGCTGTTGTCAGGAGGGGCTGCATGGAGGGCAAGTCTTCATAGTCGCTaGTCCACTTGTGAATTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSLSSKWLLSGGAAWRASLHSR*STCEFR Trigger: GCGGAATTCACAAGTGGATCAGCGACTATGAAGACT...TGCCCTCCATGCAGCCCCTCCTGACAACAGCCACTTGGAACTCAGTGAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR GCA 90 bp | ACCAGCAGTGACCCTGACTGTAGCTGCCCCGGTGTAATATATACACAGCTCAGAAGGTCGGGCTTCTCCTaGAGCTCCACTGTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TSSDPDCSCPGVIYTQLRRSGFS*SSTVLM Trigger: CATCAAGACAGTGGAGCTGCAGGAGAAGCCCGACCT...TCTGAGCTGTGTATATATTACACCGGGGCAGCTACAGTCAGGGTCACTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CAA 72 bp | TCTATTTGGCAAGCTCCTGCAGTACCCTGCCTGCCTTaGTGGGCTTTATCTCGAACAGAACCAGCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SIWQAPAVPCLP*WALSRTEPAVT Trigger: GGTCACTGCTGGTTCTGTTCGAGATAAAGCCCACAAAGGCAGGCAGGGTACTGCAGGAGCTTGCCAAATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCAACACCCACACCCAGCTATAAAGGGTTCTGTGAGTGGATTCAGTTAAGCCCGGCACCGGCTTaGGATGGAAAAACTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPPTPTPSYKGFCEWIQLSPAPA*DGKTVT Trigger: AGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGGCT...TAACTGAATCCACTCACAGAACCCTTTATAGCTGGGTGTGGGTGTTGGAGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTAGGGCAGGTCATAAACAGACAAGGCACAAACTCAGGGTCAGACTCCCTTCTACCGGCACCGGCTTaGGATGGAAAAACTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLGQVINRQGTNSGSDSLLPAPA*DGKTVT Trigger: AGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAG...AAGGGAGTCTGACCCTGAGTTTGTGCCTTGTCTGTTTATGACCTGCCCTAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCATAAACAGACAAGGCACAAACTCAGGGTCAGACTCCCTTGTATGTCAGACTCCAGTGGAACCTaGTGTTACTGGGCAGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGHKQTRHKLRVRLPCMSDSSGT*CYWAAY Trigger: GTAGGCTGCCCAGTAACACCAGGTTCCACTGGAGTC...TGACATACAAGGGAGTCTGACCCTGAGTTTGTGCCTTGTCTGTTTATGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| 3UTR CAA 72 bp | ACTTCAATGGGTTGTGTTGAAAAGAAAAGCCTGGCCTaGAGACTCGGGTCAGATCCCAGCCCAGCGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSMGCVEKKSLA*RLGSDPSPADN Trigger: ATTGTCCGCTGGGCTGGGATCTGACCCGAGTCTCAAGGCCAGGCTTTTCTTTTCAACACAACCCATTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| 3UTR CAA 72 bp | AATTCTGAGGTGCATCTCCCAGAAGCAGCCCTGCACTaGCCACCAGTGGTGGAAATAAAATCTCCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSEVHLPEAALH*PPVVEIKSPIF Trigger: GAAGATGGGAGATTTTATTTCCACCACTGGTGGCAAGTGCAGGGCTGCTTCTGGGAGATGCACCTCAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166766.2 |
||
| CDS TCA 90 bp | TGGGGCTCTCGGCAAGGTCGGGCTTCTCCTGCAGCTCCACTGTCTTaGTGGTGCCGCAACAGGAGAGGCACCGAGACAGGCTCTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGSRQGRASPAAPLS*WCRNRRGTETGSPV Trigger: CACAGGAGAGCCTGTCTCGGTGCCTCTCCTGTTGCGGCACCATCAAGACAGTGGAGCTGCAGGAGAAGCCCGACCTTGCCGAGAGCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 ENSMUST00000167483.2 |
||
| CDS CCA 90 bp | AGCCCGGCACCGGCTTGGGATGGAAAAACTGTGACTTTGGCTCCGTaGGGCTCTCGGCAAGGTCGGGCTTCTCCTGCAGCTCCACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAPAWDGKTVTLAP*GSRQGRASPAAPLS Trigger: AGACAGTGGAGCTGCAGGAGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 |
||
| CDS TCA 90 bp | TGTTACTGGGCAGCCTACCGGCACCGGCTTGGGATGGAAAAACTGTaGCTTTGGCTCCGTGGGGCTCTCGGCAAGGTCGGGCTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CYWAAYRHRLGMEKL*LWLRGALGKVGLLL Trigger: CAGGAGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAGGCTGCCCAGTAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS CCA 90 bp | CTACCGGCACCGGCTTGGGATGGAAAAACTGTGACTTTGGCTCCGTaGGGCTCTCGGCAAGGTCGGGCTTCTCCTGCAGCTCCACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPAPAWDGKTVTLAP*GSRQGRASPAAPLS Trigger: AGACAGTGGAGCTGCAGGAGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS CCA 90 bp | CTCCAGTGGAACCTGGTGTTACTGGGCAGCCTACCGGCACCGGCTTaGGATGGAAAAACTGTGACTTTGGCTCCGTGGGGCTCTCGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LQWNLVLLGSLPAPA*DGKTVTLAPWGSRQ Trigger: TTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAGGCTGCCCAGTAACACCAGGTTCCACTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS TCA 90 bp | ATAAGCTACCTGAAAGCCCGGCACCGGCTTGGGATGGAAAAACTGTaGCTTTGGCTCCGTGGGGCTCTCGGCAAGGTCGGGCTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISYLKARHRLGMEKL*LWLRGALGKVGLLL Trigger: CAGGAGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGGCTTTCAGGTAGCTTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 |
||
| CDS-3UTR CAA 90 bp | GCCAAATCCTCCTCCAAGGCAGCCTTGCGTCGGTGCAGAGATGGAAGTGTGGGATGCAGCTCCACTGTCTaGATGGTGCCGCAACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AKSSSKAALRRCRDGSVGCSSTV*MVPQQE Trigger: CTCCTGTTGCGGCACCATCAAGACAGTGGAGCTGCA...TCCCACACTTCCATCTCTGCACCGACGCAAGGCTGCCTTGGAGGAGGATTTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018184.10 |
||
| CDS CCA 90 bp | AACTTGACTGGAACAGCTAACAGGGGAAACGAGCGCAGGAGAGTTTaGGGTACCCTGAAAGGAGGTCTGTGTCTATGCCACCCAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLTGTANRGNERRRV*GTLKGGLCLCHPSS Trigger: GGAACTTGGGTGGCATAGACACAGACCTCCTTTCAGGGTACCCCAAACTCTCCTGCGCTCGTTTCCCCTGTTAGCTGTTCCAGTCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166019.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTAGGGCAGGTCATAAACAGACAAGGCACAAACTCAGGGTCAGACTCCCTTTGCAGCTCCACTGTCTaGATGGTGCCGCAACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLGQVINRQGTNSGSDSLCSSTV*MVPQQE Trigger: CTCCTGTTGCGGCACCATCAAGACAGTGGAGCTGCA...AAGGGAGTCTGACCCTGAGTTTGTGCCTTGTCTGTTTATGACCTGCCCTAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS TCA 90 bp | GAACAGCTAACAGGGGAAACGAGCGCAGGAGAGTTTGGGGTACCCTaGAAGGAGGTCTGTGTCTATGCCACCCAAGTTCCAATTCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: EQLTGETSAGEFGVP*KEVCVYATQVPIHY Trigger: ATAGTGAATTGGAACTTGGGTGGCATAGACACAGACCTCCTTTCAGGGTACCCCAAACTCTCCTGCGCTCGTTTCCCCTGTTAGCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166019.2 |
||
| CDS GCA 90 bp | GAGCGCAGGAGAGTTTGGGGTACCCTGAAAGGAGGTCTGTGTCTATaGCACCCAAGTTCCAATTCACTATGTCTCTTTCTAGCTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: ERRRVWGTLKGGLCL*HPSSNSLCLFLAPS Trigger: CGATGGAGCTAGAAAGAGACATAGTGAATTGGAACTTGGGTGGCATAGACACAGACCTCCTTTCAGGGTACCCCAAACTCTCCTGCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166019.2 |
||
| CDS TCA 72 bp | GCAGCCTACCGGCACCGGCTTGGGATGGAAAAACTGTaGCTTTGGCTCCGTGGGGCTCTCGGCAAGGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAYRHRLGMEKL*LWLRGALGKVG Trigger: CCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAGGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
||
| CDS CAA 90 bp | GTGGGGCTCTCGGCAAGGTCGGGCTTCTCCTGCAGCTCCACTGTCTaGATGGTGCCGCAACAGGAGAGGCACCGAGACAGGCTCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VGLSARSGFSCSSTV*MVPQQERHRDRLSC Trigger: ACAGGAGAGCCTGTCTCGGTGCCTCTCCTGTTGCGGCACCATCAAGACAGTGGAGCTGCAGGAGAAGCCCGACCTTGCCGAGAGCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 ENSMUST00000167483.2 |
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| CDS CAA 90 bp | CTGGGCAGCCTACCGGCACCGGCTTGGGATGGAAAAACTGTGACTTaGGCTCCGTGGGGCTCTCGGCAAGGTCGGGCTTCTCCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LGSLPAPAWDGKTVT*APWGSRQGRASPAA Trigger: AGCTGCAGGAGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAGGCTGCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
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| CDS TCA 72 bp | CTGAAAGCCCGGCACCGGCTTGGGATGGAAAAACTGTaGCTTTGGCTCCGTGGGGCTCTCGGCAAGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: LKARHRLGMEKL*LWLRGALGKVG Trigger: CCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGGCTTTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 |
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| CDS CAA 72 bp | TCGGCAAGGTCGGGCTTCTCCTGCAGCTCCACTGTCTaGATGGTGCCGCAACAGGAGAGGCACCGAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SARSGFSCSSTV*MVPQQERHRDR Trigger: CCTGTCTCGGTGCCTCTCCTGTTGCGGCACCATCAAGACAGTGGAGCTGCAGGAGAAGCCCGACCTTGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 ENSMUST00000167483.2 |
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| CDS CAA 72 bp | AGCCCGGCACCGGCTTGGGATGGAAAAACTGTGACTTaGGCTCCGTGGGGCTCTCGGCAAGGTCGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SPAPAWDGKTVT*APWGSRQGRAS Trigger: AGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 |
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| CDS CAA 90 bp | CTACCTGAAAGCCCGGCACCGGCTTGGGATGGAAAAACTGTGACTTaGGCTCCGTGGGGCTCTCGGCAAGGTCGGGCTTCTCCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LPESPAPAWDGKTVT*APWGSRQGRASPAA Trigger: AGCTGCAGGAGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGGCTTTCAGGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 |
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| CDS CCA 72 bp | CCGGCTTGGGATGGAAAAACTGTGACTTTGGCTCCGTaGGGCTCTCGGCAAGGTCGGGCTTCTCCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PAWDGKTVTLAP*GSRQGRASPAA Trigger: AGCTGCAGGAGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 ENSMUST00000167483.2 |
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| CDS CCA 72 bp | GGTGTTACTGGGCAGCCTACCGGCACCGGCTTGGGATaGAAAAACTGTGACTTTGGCTCCGTGGGGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: GVTGQPTGTGLG*KNCDFGSVGLS Trigger: CGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAGGCTGCCCAGTAACACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
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| CDS CAA 72 bp | CTACCGGCACCGGCTTGGGATGGAAAAACTGTGACTTaGGCTCCGTGGGGCTCTCGGCAAGGTCGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPAPAWDGKTVT*APWGSRQGRAS Trigger: AGAAGCCCGACCTTGCCGAGAGCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
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| CDS CCA 72 bp | AACCTGGTGTTACTGGGCAGCCTACCGGCACCGGCTTaGGATGGAAAAACTGTGACTTTGGCTCCGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: NLVLLGSLPAPA*DGKTVTLAPWG Trigger: GCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAGGCTGCCCAGTAACACCAGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
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| CDS CAA 72 bp | GAACCTGGTGTTACTGGGCAGCCTACCGGCACCGGCTaGGGATGGAAAAACTGTGACTTTGGCTCCGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: EPGVTGQPTGTG*GWKNCDFGSVG Trigger: CCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGTAGGCTGCCCAGTAACACCAGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
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| CDS CCA 72 bp | ACACCACATAAGCTACCTGAAAGCCCGGCACCGGCTTaGGATGGAAAAACTGTGACTTTGGCTCCGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TPHKLPESPAPA*DGKTVTLAPWG Trigger: GCCCCACGGAGCCAAAGTCACAGTTTTTCCATCCCAAGCCGGTGCCGGGCTTTCAGGTAGCTTATGTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018184.10 ENSMUST00000166019.2 |
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| CDS TCA 72 bp | ACACATTACAGAGACTGCTATAGGGAATGGTCTCTCTaGAAGCCTACTGCTGAGCCCACCCAGGCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: THYRDCYREWSL*KPTAEPTQAPA Trigger: GGCTGGGGCCTGGGTGGGCTCAGCAGTAGGCTTTCAGAGAGACCATTCCCTATAGCAGTCTCTGTAATGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167483.2 |
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| CDS CCA 72 bp | GGAACAGCTAACAGGGGAAACGAGCGCAGGAGAGTTTaGGGTACCCTGAAAGGAGGTCTGTGTCTATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GTANRGNERRRV*GTLKGGLCLCH Trigger: GTGGCATAGACACAGACCTCCTTTCAGGGTACCCCAAACTCTCCTGCGCTCGTTTCCCCTGTTAGCTGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166019.2 |
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| CDS GCA 72 bp | AGAGTTTGGGGTACCCTGAAAGGAGGTCTGTGTCTATaGCACCCAAGTTCCAATTCACTATGTCTCTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: RVWGTLKGGLCL*HPSSNSLCLFL Trigger: TAGAAAGAGACATAGTGAATTGGAACTTGGGTGGCATAGACACAGACCTCCTTTCAGGGTACCCCAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166019.2 |
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