RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RRP12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035049

Ensembl transcript IDs: ENSMUST00000038677.5

Found 281 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAGAGTCCTGCTTCCAATaGGTCATTCTCTGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKESCFQ*VILCPG
Trigger: ACCTGGACAGAGAATGACTCATTGGAAGCAGGACTC...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
3UTR CCA 72 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTaGACCACAGCAGAGAACAGCTCCATTCCCCAGAGG +
Preference number: 3 (lower is better)
Translates to: LVLNIMGVRKGP*TTAENSSIPQR
Trigger: CCTCTGGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
3UTR GCA 72 bp AGCAGATCTTACACACGCAGACCACAGTCATCACTCTaGTCTCATGGCCACATTGGACAGAAAGCAGAGCAC +
Preference number: 3 (lower is better)
Translates to: SRSYTRRPQSSL*SHGHIGQKAEH
Trigger: GTGCTCTGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
3UTR CCA 72 bp CAGACCACAGTCATCACTCTGCTCTCATGGCCACATTaGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: QTTVITLLSWPH*TESRAPLKAFS
Trigger: TGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
3UTR CCA 72 bp TTACACACGCAGACCACAGTCATCACTCTGCTCTCATaGCCACATTGGACAGAAAGCAGAGCACCACTTAAG +
Preference number: 3 (lower is better)
Translates to: LHTQTTVITLLS*PHWTESRAPLK
Trigger: CTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
3UTR TCA 72 bp GCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATaGGTCATTCTCTGTCCAGGTTTAGCAAGGCTCACA +
Preference number: 3 (lower is better)
Translates to: ASISLRNESCFQ*VILCPGLARLT
Trigger: TGTGAGCCTTGCTAAACCTGGACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCCAGGCCCAGGCTGGGTaGCAAGGACTCGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPQAQAG*QGLDGP
Trigger: TGGCCCATCGAGTCCTTGCCACCCAGCCTGGGCCTG...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCACGGGCTGCCGGGCCCTaGGAACTGGCACACACCTCC +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKARAAGP*ELAHTS
Trigger: GGAGGTGTGTGCCAGTTCTCAGGGCCCGGCAGCCCG...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCTGTGCCCAGAGTCCGTaGCAGGCCTTTGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPCAQSP*QAFEGG
Trigger: GCCTCCTTCAAAGGCCTGGCACGGACTCTGGGCACA...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCGCTTGGCATGCACGGTaGAGCTCAGCAGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPAWHAR*SSAVHG
Trigger: ACCATGGACTGCTGAGCTTCACCGTGCATGCCAAGC...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGGGCGTTGAGTTCTGCTaGCAGGGTGCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATGVEFC*QGARAG
Trigger: CCCAGCCCTAGCACCCTGTCAGCAGAACTCAACGCC...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCATCATCCAGGTGGCTCTaGACGAAGCGGGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKASSRWL*TKRAAG
Trigger: CCCGGCAGCCCGCTTCGTGCAGAGCCACCTGGATGA...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCACATGGTCCCTCTTCTTaGCCCGCCCAGGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAHGPSS*PAQAQA
Trigger: AGCCTGGGCCTGGGCGGGGCAAGAAGAGGGACCATG...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCGGCGATGGCGGCAAGTaGCGGGGTTGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFGDGGK*RGCCRC
Trigger: GCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCC...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCCCGGGCCCTGAGAACTaGCACACACCTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESPGPEN*HTPPPA
Trigger: TGCTGGAGGAGGTGTGTGCCAGTTCTCAGGGCCCGG...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCATGCAACGGCAGCCAGTaGCTCTGGGGACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKACNGSQ*LWGLHC
Trigger: GCAGTGGAGTCCCCAGAGTCACTGGCTGCCGTTGCA...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACGCTGTGTGGGGGAAGTaGGGAGAGAGGCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDAVWGK*GERRRS
Trigger: TGACCTGCGCCTCTCTCCTCACTTCCCCCACACAGC...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCAGGCAAGTGGCGGGGTTaGTGTCGCTGCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAGKWRG*CRCCGL
Trigger: AAGGCCACAGCAGCGACAGCAACCCCGCCACTTGCC...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGAAGACCCCCAGGAGCTaGAGCACAGAGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATKTPRS*STELQA
Trigger: AGCCTGGAGCTCTGTGCTGCAGCTCCTGGGGGTCTT...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCCATCTGTGGGCCTTGTaGAGAACCCAGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESHLWAL*RTQAGG
Trigger: CCCTCCTGCCTGGGTTCTGCACAAGGCCCACAGATG...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCCCACAGGGCGATGGATaGCAGAGCCTCCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESPQGDG*QSLQLG
Trigger: ACCAAGCTGGAGGCTCTGGCATCCATCGCCCTGTGG...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCTTGCTGTCGCTGCTGTaGCCTTTCTTCCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPLLSLL*PFFQRF
Trigger: GAAGCGCTGGAAGAAAGGCCACAGCAGCGACAGCAA...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGGCTTCCGAAGGAGGATaGCCAGGCAGGAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQASEGG*PGRRGP
Trigger: GGGTCCTCTCCTGCCTGGCCATCCTCCTTCGGAAGC...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCGCATATGCAGCGTGGTaGTGGCCTCTTTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPAYAAW*WPLWNL
Trigger: GAGGTTCCAAAGAGGCCACCACCACGCTGCATATGC...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGAGGGTACGTAGGGCCTaGCACACAGTGACCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATRVRRA*HTVTLR
Trigger: CCTGAGGGTCACTGTGTGCCAGGCCCTACGTACCCT...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCCTCAACTTGAAGCCATaGTCCCTCTTCTTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPLNLKP*SLFLPR
Trigger: GCGGGGCAAGAAGAGGGACCATGGCTTCAAGTTGAG...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGACTGCCCTTGAGAACTaGGCACACTCCGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATTALEN*AHSVLS
Trigger: GCTCAGCACGGAGTGTGCTCAGTTCTCAAGGGCAGT...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACTCCGTGCCAGGCCTTTaGAGGAGGCAGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDSVPGL*RRQPHL
Trigger: CAGATGTGGCTGCCTCCTTCAAAGGCCTGGCACGGA...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCATGGGATCCAGGAAGTTaGGGGGCTCATCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAWDPGS*GAHRHH
Trigger: GTGGTGGCGATGAGCCCCTCAACTTCCTGGATCCCA...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCGAAGCAGAGTCTCACTaGAGCTCTTCACCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPEAESH*SSSPGL
Trigger: AAGGCCTGGTGAAGAGCTGCAGTGAGACTCTGCTTC...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCAGGTTATGGAAGGCCTaGATGGCACAGGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPRLWKA*MAQAVT
Trigger: TGTGACAGCCTGTGCCATGCAGGCCTTCCATAACCT...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACCTCCACTGTGCTGCCTaGCTGAGCCAGGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDLHCAA*LSQVHC
Trigger: GCAATGGACCTGGCTCAGGCAGGCAGCACAGTGGAG...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACTGCCGCCTCTCCAGCTaGAACAGGCTGCCCATACAG +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDCRLSS*NRLPIQ
Trigger: CTGTATGGGCAGCCTGTTGCAGCTGGAGAGGCGGCA...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCCTCTACAGCAGCCTaGCTCAGGGCACGATGCTTC +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATSSTAA*LRARCF
Trigger: GAAGCATCGTGCCCTGAGCCAGGCTGCTGTAGAGGA...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTTAGCCACAGGGCGATaGATGCCAGAGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATLATGR*MPEPPA
Trigger: AGCTGGAGGCTCTGGCATCCATCGCCCTGTGGCTAA...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACGGTACACCTGAAGGGTaGTGGGATAGCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENGTPEG*WDSPRP
Trigger: AGGCCTGGGGCTATCCCATCACCCTTCAGGTGTACC...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCGAACATGATCCCGGATaGCAGGCAGCAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFEHDPG*QAAASS
Trigger: GGAGCTGGCTGCTGCCTGTCATCCGGGATCATGTTC...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCCTTCCTCCTCCCGTATaGTCAGCCGGCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFLPPPV*SAGHQH
Trigger: GTGCTGATGGCCGGCTGATCATACGGGAGGAGGAAG...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACCGGGGTTGCTGTCGCTaGTGTGGCCTTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENRGCCR*CGLSSS
Trigger: GCTGGAAGAAAGGCCACAGCAGCGACAGCAACCCCG...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACTCGACTCCACTGTGCTaGCTGCCTGAGCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENSTPLC*LPEPGP
Trigger: TGGACCTGGCTCAGGCAGGCAGCACAGTGGAGTCGA...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCGGAGCTGCTCCACTGTaGTGGTCCCCATCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFGAAPL*WSPSAL
Trigger: AAGGGCTGATGGGGACCAGCACAGTGGAGCAGCTCC...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCAGCTTCCGCTGCTCCTTaGCCCGGCCTCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAASAAP*PGLFLL
Trigger: AAGAAGAAAGAGGCCGGGGCAAGGAGCAGCGGAAGC...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTCGAGCGGCCTGGCGATaGCGGCAAGTGGCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSRAAWR*RQVAGL
Trigger: CAACCCCGCCACTTGCCGCCATCGCCAGGCCGCTCG...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGCATGAGCACAGGACTTaGCACCCGCTTCAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATHEHRT*HPLQDK
Trigger: CTTGTCCTGAAGCGGGTGCCAAGTCCTGTGCTCATG...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCTATGCAGCGTGGTGGTaGCCTCTTTGGAACCTCCAG +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESYAAWW*PLWNLQ
Trigger: CTGGAGGTTCCAAAGAGGCCACCACCACGCTGCATA...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGAGCTTGGTACCGAGGTaGGATCTCCAGCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATSLVPR*DLQLIL
Trigger: GAGGATGAGCTGGAGATCCCACCTCGGTACCAAGCT...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCCGCCGCCACTTGTaGATGAGGCGAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENSRRHL*MRREKT
Trigger: TGTCTTCTCTCGCCTCATTCACAAGTGGCGGCGGCT...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACCTGGTTTCCCGAACATaGTCCCGGATGACAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENLVSRT*SRMTGS
Trigger: GCTGCCTGTCATCCGGGATCATGTTCGGGAAACCAG...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCCGGTCTCCGTCTCCTTaGCTCCCTGGGATCGAATCA +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFRSPSP*LPGIES
Trigger: TGATTCGATCCCAGGGAGGCAAGGAGACGGAGACCG...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCGTATTCAGCTCCAGGTaGAGCCTTCTTAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESVFSSR*SLLSHR
Trigger: CCTGTGGCTAAGAAGGCTGCACCTGGAGCTGAATAC...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCTGCAGAACTTGGCAGTaGAGACGGCAGCAGGATGAT +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESCRTWQ*RRQQDD
Trigger: ATCATCCTGCTGCCGTCTCCACTGCCAAGTTCTGCA...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTATGGAAGGCCTGCATaGCACAGGCTGTCACAAGCA +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATYGRPA*HRLSQA
Trigger: TGCTTGTGACAGCCTGTGCCATGCAGGCCTTCCATA...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACGGGCTGGGCTTGGCATaGAAGAGGTTATGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENGLGLA*KRLWKA
Trigger: GGCCTTCCATAACCTCTTCCATGCCAAGCCCAGCCC...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCCAGCAGCCAGCTCCGTaGGAAATCCAGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFQQPAP*EIQSLL
Trigger: GAGGAGACTCTGGATTTCCCACGGAGCTGGCTGCTG...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCCTGTCACCTTTGCTCTaGACAGGCTCCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESLSPLL*TGSSSS
Trigger: AGAGGAAGAGGAGCCTGTCCAGAGCAAAGGTGACAG...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACCAGAGAACTTCTTCATaGGCACAGGACTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDQRTSS*AQDLAP
Trigger: GGGTGCCAAGTCCTGTGCTCATGAAGAAGTTCTCTG...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCAGCTGCCCATACAGGTTaGAGAGGATTGGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAAAHTG*RGLAGS
Trigger: ACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGC...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGCTCAGGGTCCCCGACTaGAGCTCATTATGCAACTTC +
Preference number: 4 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQLRVPD*SSLCNF
Trigger: GAAGTTGCATAATGAGCTGCAGTCGGGGACCCTGAG...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAAGCACGGCGAGGGGCTaGCGCCTCTCCAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKSTARG*RLSSCN
Trigger: GTTGCAGCTGGAGAGGCGGCAGCCCCTCGCCGTGCT...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAGCTTCATCCGGAAGTaGCGTCGCATGTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQSFIRK*RRMSSD
Trigger: GTCAGATGACATGCGACGGCACTTCCGGATGAAGCT...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGCAATGCTGTCACCTTTaGTCTGGACAGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATQCCHL*SGQAPL
Trigger: AAGAGGAGCCTGTCCAGAGCAAAGGTGACAGCATTG...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGGTCTCCTTGCCTCCCTaGGATCGAATCACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQVSLPP*DRITSV
Trigger: TACAGAGGTGATTCGATCCCAGGGAGGCAAGGAGAC...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGGCTGTCACAAGCACATaGTTCAAGGTCATGACCCGA +
Preference number: 4 (lower is better)
Translates to: PHWTESRAPLKAFSEVATAVTST*FKVMTR
Trigger: TCGGGTCATGACCTTGAACCATGTGCTTGTGACAGC...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACTTCAGATCATCCAGGTaGCTCTGCACGAAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENFRSSR*LCTKRA
Trigger: AGCCCGCTTCGTGCAGAGCCACCTGGATGATCTGAA...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGGCACAGGATCACCTCTaGGATGAGGGCAGCTATGAA +
Preference number: 4 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQAQDHL*DEGSYE
Trigger: TTCATAGCTGCCCTCATCCCAGAGGTGATCCTGTGC...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAACGCCCAGGCCCAGGCTaGGTGGCAAGGACTCGATGG +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKRPGPG*VARTRW
Trigger: CCATCGAGTCCTTGCCACCCAGCCTGGGCCTGGGCG...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCACATGAAATTTGTATGTaGGGCCCTCTTCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAHEICM*GPLPLP
Trigger: GGGCAGTGGAAGAGGGCCTCACATACAAATTTCATG...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACGGACAGACAATCTGGTaGAATCAGAGCTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDGQTIW*NQSWQD
Trigger: ATCCTGCCAGCTCTGATTTCACCAGATTGTCTGTCC...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACCCGTCGCATGTCATCTaGCAACTTCCCAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENPSHVI*QLPNGF
Trigger: GAAGCCATTGGGAAGTTGTCAGATGACATGCGACGG...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCCCACCTCGGGACCCATaGTGGTCACTGCAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVPPRDP*WSLQPL
Trigger: TAGGGGCTGCAGTGACCAGCATGGGTCCCGAGGTGG...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTCCGGCTCCTCTGTCGTaGCAGCTTCCGCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSPAPLS*QLPLLL
Trigger: AAGGAGCAGCGGAAGCTGGCACGACAGAGGAGCCGG...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCGCATGGAAGAGGTTATaGAAGGCCTGCATGGCACAG +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFAWKRL*KACMAQ
Trigger: CTGTGCCATGCAGGCCTTCCATAACCTCTTCCATGC...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCAAAAATCGAGCAAGATaGCCTAGCCCCAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFKNRAR*PSPRSR
Trigger: GCGAGACCTGGGGCTAGGCCATCTTGCTCGATTTTT...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGGTCACACAGGGACTaGAGGCACTTCTTCATCACA +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDRSHRD*RHFFIT
Trigger: TGTGATGAAGAAGTGCCTCCAGTCCCTGTGTGACCT...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGAGACGGCAGCAGGATaGTGGGCAGGGGCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSETAAG*WAGAFS
Trigger: TGAAAAGGCCCCTGCCCATCATCCTGCTGCCGTCTC...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACGATTCCCAGAAGCGCTaGACTTTGCTGAAAGTGACA +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDDSQKR*TLLKVT
Trigger: TGTCACTTTCAGCAAAGTGCAGCGCTTCTGGGAATC...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCCTCTGGGGACTCCACTaGTTCCATTGTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFLWGLH*FHCCHQ
Trigger: CTGATGACAACAATGGAAGCAGTGGAGTCCCCAGAG...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCAACTAACTGTGGTAACTaGACCCAGAAGGCCAGGATA +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKATNCGN*TQKARI
Trigger: TATCCTGGCCTTCTGGGTGCAGTTACCACAGTTAGT...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTACCTTCCTTCAGCCATaGCCGGCTCCTCTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSTFLQP*PAPLSC
Trigger: GCACGACAGAGGAGCCGGGCATGGCTGAAGGAAGGT...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCTTAGCATATGCAGCGTaGTGGTGGCCTCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TESRAPLKAFSEVATSHFLAYAA*WWPLWN
Trigger: GTTCCAAAGAGGCCACCACCACGCTGCATATGCTAA...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCACTGACCAGGTTGATGTaGGCTTTCTCCATGACCTTA +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKALTRLM*AFSMTL
Trigger: TAAGGTCATGGAGAAAGCCCACATCAACCTGGTCAG...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACTTGGCAGGAAGTTTTTaGCAAAGCGGCTCACTTCAG +
Preference number: 4 (lower is better)
Translates to: DLTHADHSHHSALMATLDLAGSF*QSGSLQ
Trigger: CTGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAA...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCACGAGAACCTTCTCGGTaGCTTTTTCCAGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAREPSR*LFPGSY
Trigger: ATAGCTTCCTGGAAAAAGCCACCGAGAAGGTTCTCG...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCGCCGCCACTTGTGAATaGGGCGAGAGAAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVAATCE*GERRQV
Trigger: GACCTGTCTTCTCTCGCCTCATTCACAAGTGGCGGC...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAAGGGCCTGGCACACAGTaGCCCTCAGGTCTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLEGPGTQ*PSGLGV
Trigger: AACGCCCAGACCTGAGGGTCACTGTGTGCCAGGCCC...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCGACTGCAGCTCATTATaGAACTTCACAGCATCAACA +
Preference number: 4 (lower is better)
Translates to: HTQTTVITLLSWPHWTESDCSSL*NFTAST
Trigger: TGTTGATGCTGTGAAGTTGCATAATGAGCTGCAGTC...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGCACAGAGCTCCAGGCTaGATGAAATTTGTATGTGAG +
Preference number: 4 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQHRAPG*MKFVCE
Trigger: CTCACATACAAATTTCATGCAGCCTGGAGCTCTGTG...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAGCCGCCGATCCTTTCTaGGGAGTTTGTGTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKAADPF*GVCVPP
Trigger: AGGCGGGACACAAACTCCGCAGAAAGGATCGGCGGC...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTTCCAGCGCTTCAACTTaGCCGAGACACCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSSSAST*PRHQRA
Trigger: TGCCCTCTGGTGTCTCGGCCAAGTTGAAGCGCTGGA...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTCCTGGATGCAGAACTTaGCAGTGGAGACGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSPGCRT*QWRRQQ
Trigger: CTGCTGCCGTCTCCACTGCCAAGTTCTGCATCCAGG...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCGTAAATCATTCTCACTaGGAACGTAGTCATATAGTG +
Preference number: 4 (lower is better)
Translates to: SWELERGPGPQQRTAPFPVNHSH*ERSHIV
Trigger: CACTATATGACTACGTTCCCAGTGAGAATGATTTAC...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCATCTCCTTGAGAGTCTaGGTAGCAGCCGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVISLRV*VAAAAT
Trigger: AGTGGCGGCGGCTGCTACCCAGACTCTCAAGGAGAT...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACATCTTAGTGATGTACTaGGGAGGACCTGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENILVMY*GGPEAE
Trigger: TTCAGCCTCAGGTCCTCCCCAGTACATCACTAAGAT...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAAGCAGCCCCTACAGCCTaGTCCAGGGCTGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLEAAPTA*SRAAVW
Trigger: CCACACAGCAGCCCTGGACCAGGCTGTAGGGGCTGC...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGGGCACGATGCTTCTTaGCTCGGGTCTCAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSGHDAS*LGSQLS
Trigger: GGAAAGCTGAGACCCGAGCCAAGAAGCATCGTGCCC...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAACTTCCTTGCACCCACTaGCACCTCCTTGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKLPCTH*HLLGAQ
Trigger: CTGTGCACCAAGGAGGTGTCAGTGGGTGCAAGGAAG...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGAAGGCCAGGATAGATaGGGACAAGGTACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSEGQDR*GQGTAA
Trigger: TGCAGCGGTACCTTGTCCTCATCTATCCTGGCCTTC...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAGCCACCTCTGGATCTTaGTCCATGGTCGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKATSGS*SMVVSG
Trigger: CCCTGAGACGACCATGGACCAAGATCCAGAGGTGGC...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAAGGCAGCCACATCTGTaGGCCTTGTGCAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKRQPHL*ALCRTQ
Trigger: CTGGGTTCTGCACAAGGCCCACAGATGTGGCTGCCT...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGAGCTCCAGGCTGCATaGAATTTGTATGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSELQAA*NLYVRP
Trigger: GGGCCTCACATACAAATTTCATGCAGCCTGGAGCTC...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAACAGGCCTCCAGGTCTTaGTTCCGAAGGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLEQASRS*FRRRMA
Trigger: GGCCATCCTCCTTCGGAAGCAAGACCTGGAGGCCTG...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAACCAGCTGCAACAGGCTaGCCATACAGGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKPAATG*PYRLKR
Trigger: CCTCTTCAACCTGTATGGGCAGCCTGTTGCAGCTGG...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAAGTCGTCTCAGGGGCTTaGCTTTTGCCCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLEVVSGA*LLPRLR
Trigger: CCTGAGCCTGGGCAAAAGCCAAGCCCCTGAGACGAC...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCTGTGAGCAGCTGAGTTaGATTCCCAGAAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVCEQLS*IPRSAA
Trigger: TGCAGCGCTTCTGGGAATCCAACTCAGCTGCTCACA...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTAATCGCAGGAAAGCATaGCCCATCTCCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSNRRKA*PISTSK
Trigger: CTTGCTGGTGGAGATGGGCCATGCTTTCCTGCGATT...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAATCTTCGGCTTGGCATaGACGGTGAAGCTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKIFGLA*TVKLSS
Trigger: ACTGCTGAGCTTCACCGTGCATGCCAAGCCGAAGAT...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCTTCTTCATCACAGGATaGGCCTGCTTTCCGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVFFITG*ACFPQA
Trigger: AGCTTGCGGAAAGCAGGCCCATCCTGTGATGAAGAA...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAAACTGTGCTGCCTGCCTaGGCCAGGTCCATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLETVLPA*ARSIAF
Trigger: AAAAGCAATGGACCTGGCTCAGGCAGGCAGCACAGT...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCTCTTCACAATATGTATaGGGCACTTCAAACGGGGCC +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVSSQYV*GTSNGA
Trigger: GGCCCCGTTTGAAGTGCCTCATACATATTGTGAAGA...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGACTTCTCAATCTCCTaGATGCAGAACTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSDFSIS*MQNLAV
Trigger: CACTGCCAAGTTCTGCATCCAGGAGATTGAGAAGTC...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAACCACTGACACCTCCTTaGTGCACAGGATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLEPLTPP*CTGSPL
Trigger: CAGAGGTGATCCTGTGCACCAAGGAGGTGTCAGTGG...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAATGCAGAGCGTCTTCCTaGTTGGAGCCAAATCGCAGG +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLECRASS*LEPNRR
Trigger: CCTGCGATTTGGCTCCAACCAGGAAGACGCTCTGCA...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTCTGACAACTTCCCAATaGCTTCCATCACTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSLTTSQ*LPSLAA
Trigger: TGCAGCTAGTGATGGAAGCCATTGGGAAGTTGTCAG...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCGCAAGAAGTAAGTGGTaGAGAAACCAAGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVARSKW*RNQAWF
Trigger: AAACCAGGCTTGGTTTCTTCACCACTTACTTCTTGC...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAAAGCAGTGTTAGCATATaGAGCGTGGTGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLESSVSI*SVVVAS
Trigger: AGAGGCCACCACCACGCTGCATATGCTAACACTGCT...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTCTGAGCCAGGTCCATTaGTTTTCTCTTAAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSLSQVH*FSLKSG
Trigger: ACCACTCTTAAGAGAAAAGCAATGGACCTGGCTCAG...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTCCAAAATCTCCTCAATaGTGTCACCTTTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRHLSLLEMSPASNESFSPKSPQ*CHLCSG
Trigger: TCCAGAGCAAAGGTGACAGCATTGAGGAGATTTTGG...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR TCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAGGGTCTCAGCTTTCCTaGTGTTTATCAGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKGSQLS*CLSGLC
Trigger: ACAAAGTCCTGATAAACATCAGGAAAGCTGAGACCC...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCCAGGTTGAAGAGGATTaGCAGGAAGTTTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RHLSLLEMSPASNESFSVQVEED*QEVFGK
Trigger: TTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTG...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAAAACTCAAACAAGAGGTaGGTCAGAGCCAAAATGCTG +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKNSNKR*VRAKML
Trigger: CAGCATTTTGGCTCTGACCCACCTCTTGTTTGAGTT...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR GCA 90 bp CACATTTCCACTCCTAGATGTTGGCAATGTCTCCAAAGGACAATAGTTTCCAAACTTTACATCGCCTTTTaGCTTCTTGGCCTTGTATTC +
Preference number: 4 (lower is better)
Translates to: HISTPRCWQCLQRTIVSKLYIAF*LLGLVF
Trigger: GAATACAAGGCCAAGAAGGCAAAAGGCGATGTAAAG...TTTGGAAACTATTGTCCTTTGGAGACATTGCCAACATCTAGGAGTGGAAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CCA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAATTTATCAGGACTTTGTaGTATTCTGCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLEFIRTL*YSAGSR
Trigger: TCTGCTACCCGCAGAATACCACAAAGTCCTGATAAA...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp GCGGCCTGGCGATGGCGGCAAGTGGCGGGGTTGCTGTCGCTGCTGTaGCCTTTCTTCCAGCGCTTCAACTTGGCCGAGACACCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: AAWRWRQVAGLLSLL*PFFQRFNLAETPEG
Trigger: GCCCTCTGGTGTCTCGGCCAAGTTGAAGCGCTGGAAGAAAGGCCACAGCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCCAGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp TTTCCTGACGGGCGGCTGAAGAAGCGGCTCCGAGCGGCCTGGCGATaGCGGCAAGTGGCGGGGTTGCTGTCGCTGCTGTGGCCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FPDGRLKKRLRAAWR*RQVAGLLSLLWPFF
Trigger: GAAGAAAGGCCACAGCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCCAGGCCGCTCGGAGCCGCTTCTTCAGCCGCCCGTCAGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp TCCGAGCGGCCTGGCGATGGCGGCAAGTGGCGGGGTTGCTGTCGCTaGTGTGGCCTTTCTTCCAGCGCTTCAACTTGGCCGAGACACCAG +
Preference number: 5 (lower is better)
Translates to: SERPGDGGKWRGCCR*CGLSSSASTWPRHQ
Trigger: CTGGTGTCTCGGCCAAGTTGAAGCGCTGGAAGAAAGGCCACAGCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCCAGGCCGCTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp CGATTTCCAAGGGCACGGCCTGCAACACCACCTCGGGACCCATGCTaGTCACTGCAGCCCCTACAGCCTGGTCCAGGGCTGCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: RFPRARPATPPRDPC*SLQPLQPGPGLLCG
Trigger: CCCACACAGCAGCCCTGGACCAGGCTGTAGGGGCTGCAGTGACCAGCATGGGTCCCGAGGTGGTGTTGCAGGCCGTGCCCTTGGAAATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp CTCTTCTTGCCCCGCCCAGGCCCAGGCTGGGTGGCAAGGACTCGATaGGCCACCTTGGGATCCAGGAAGTTGAGGGGCTCATCGCCACCA +
Preference number: 5 (lower is better)
Translates to: LFLPRPGPGWVARTR*ATLGSRKLRGSSPP
Trigger: TGGTGGCGATGAGCCCCTCAACTTCCTGGATCCCAAGGTGGCCCATCGAGTCCTTGCCACCCAGCCTGGGCCTGGGCGGGGCAAGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp GCTGGGTGGCAAGGACTCGATGGGCCACCTTGGGATCCAGGAAGTTaGGGGGCTCATCGCCACCACCTTCCTTCAGCCATGCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGWQGLDGPPWDPGS*GAHRHHLPSAMPGS
Trigger: GGAGCCGGGCATGGCTGAAGGAAGGTGGTGGCGATGAGCCCCTCAACTTCCTGGATCCCAAGGTGGCCCATCGAGTCCTTGCCACCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp ATCCAGGAAGTTGAGGGGCTCATCGCCACCACCTTCCTTCAGCCATaGCCGGCTCCTCTGTCGTGCCAGCTTCCGCTGCTCCTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: IQEVEGLIATTFLQP*PAPLSCQLPLLLAP
Trigger: CGGGGCAAGGAGCAGCGGAAGCTGGCACGACAGAGGAGCCGGGCATGGCTGAAGGAAGGTGGTGGCGATGAGCCCCTCAACTTCCTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp CATCCAGGTGGCTCTGCACGAAGCGGGCTGCCGGGCCCTGAGAACTaGCACACACCTCCTCCAGCACGCGGTAGGCCTTCTTCTGTACAC +
Preference number: 5 (lower is better)
Translates to: HPGGSARSGLPGPEN*HTPPPARGRPSSVH
Trigger: GTGTACAGAAGAAGGCCTACCGCGTGCTGGAGGAGGTGTGTGCCAGTTCTCAGGGCCCGGCAGCCCGCTTCGTGCAGAGCCACCTGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp ACTGCAGCCCCTACAGCCTGGTCCAGGGCTGCTGTGTGGGGGAAGTaGGGAGAGAGGCGCAGGTCACACAGGGACTGGAGGCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: TAAPTAWSRAAVWGK*GERRRSHRDWRHFF
Trigger: GAAGAAGTGCCTCCAGTCCCTGTGTGACCTGCGCCTCTCTCCTCACTTCCCCCACACAGCAGCCCTGGACCAGGCTGTAGGGGCTGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CATCGATTTCCAAGGGCACGGCCTGCAACACCACCTCGGGACCCATaGTGGTCACTGCAGCCCCTACAGCCTGGTCCAGGGCTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: HRFPRARPATPPRDP*WSLQPLQPGPGLLC
Trigger: ACACAGCAGCCCTGGACCAGGCTGTAGGGGCTGCAGTGACCAGCATGGGTCCCGAGGTGGTGTTGCAGGCCGTGCCCTTGGAAATCGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CAGAGTCTTCTTCAGATCATCCAGGTGGCTCTGCACGAAGCGGGCTaGCGGGCCCTGAGAACTGGCACACACCTCCTCCAGCACGCGGTA +
Preference number: 5 (lower is better)
Translates to: QSLLQIIQVALHEAG*RALRTGTHLLQHAV
Trigger: TACCGCGTGCTGGAGGAGGTGTGTGCCAGTTCTCAGGGCCCGGCAGCCCGCTTCGTGCAGAGCCACCTGGATGATCTGAAGAAGACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp AACTTGAAGCCATGGTCCCTCTTCTTGCCCCGCCCAGGCCCAGGCTaGGTGGCAAGGACTCGATGGGCCACCTTGGGATCCAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: NLKPWSLFLPRPGPG*VARTRWATLGSRKL
Trigger: CAACTTCCTGGATCCCAAGGTGGCCCATCGAGTCCTTGCCACCCAGCCTGGGCCTGGGCGGGGCAAGAAGAGGGACCATGGCTTCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp GACCCTCAGGTCTGGGCGTTCATTGATAGCTGTGCCCAGAGTCCGTaGCAGGCCTTTGAAGGAGGCAGCCACATCTGTGGGCCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: DPQVWAFIDSCAQSP*QAFEGGSHICGPCA
Trigger: TGCACAAGGCCCACAGATGTGGCTGCCTCCTTCAAAGGCCTGGCACGGACTCTGGGCACAGCTATCAATGAACGCCCAGACCTGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CCCGCCTGGGATCCCCGCTGGGTGGCTTTCACCAGACCTTTAAACTaGCCCTGGAGCTTCACCTTCTTCCTGCGGTTGAGCTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: PAWDPRWVAFTRPLN*PWSFTFFLRLSLDL
Trigger: CAGATCCAAGCTCAACCGCAGGAAGAAGGTGAAGCTCCAGGGGCAGTTTAAAGGTCTGGTGAAAGCCACCCAGCGGGGATCCCAGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp GGCTCCTCTTCCTCTTCCTCCTCTTCCTCCTCCTCTACAGCAGCCTaGCTCAGGGCACGATGCTTCTTGGCTCGGGTCTCAGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GSSSSSSSSSSSTAA*LRARCFLARVSAFL
Trigger: CAGGAAAGCTGAGACCCGAGCCAAGAAGCATCGTGCCCTGAGCCAGGCTGCTGTAGAGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGCGGCAAGTGGCGGGGTaGCTGTCGCTGCTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PHWTESRAPLKAFSEVATRQVAG*LSLLWP
Trigger: AGGCCACAGCAGCGACAGCAACCCCGCCACTTGCCG...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp GCCCATCTCCACCAGCAAGGTAAACGCACTCTTCCTTGCACCCACTaGCACCTCCTTGGTGCACAGGATCACCTCTGGGATGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: AHLHQQGKRTLPCTH*HLLGAQDHLWDEGS
Trigger: GCTGCCCTCATCCCAGAGGTGATCCTGTGCACCAAGGAGGTGTCAGTGGGTGCAAGGAAGAGTGCGTTTACCTTGCTGGTGGAGATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp AAATCCAGAGTCTCCTCAGAGCCATCGATTTCCAAGGGCACGGCCTaGAACACCACCTCGGGACCCATGCTGGTCACTGCAGCCCCTACA +
Preference number: 5 (lower is better)
Translates to: KSRVSSEPSISKGTA*NTTSGPMLVTAAPT
Trigger: TGTAGGGGCTGCAGTGACCAGCATGGGTCCCGAGGTGGTGTTGCAGGCCGTGCCCTTGGAAATCGATGGCTCTGAGGAGACTCTGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp AGAAACGTGCCCGAGGACTTCTCGGTGAAAGCCACCTCTGGATCTTaGTCCATGGTCGTCTCAGGGGCTTGGCTTTTGCCCAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RNVPEDFSVKATSGS*SMVVSGAWLLPRLR
Trigger: CCTGAGCCTGGGCAAAAGCCAAGCCCCTGAGACGACCATGGACCAAGATCCAGAGGTGGCTTTCACCGAGAAGTCCTCGGGCACGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp GCCACTCAGAAACGTGCCCGAGGACTTCTCGGTGAAAGCCACCTCTaGATCTTGGTCCATGGTCGTCTCAGGGGCTTGGCTTTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ATQKRARGLLGESHL*ILVHGRLRGLAFAQ
Trigger: CTGGGCAAAAGCCAAGCCCCTGAGACGACCATGGACCAAGATCCAGAGGTGGCTTTCACCGAGAAGTCCTCGGGCACGTTTCTGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp GGCGAGAGAAGACAGGTCACTGCGGTTCCGAAAAATCGAGCAAGATaGCCTAGCCCCAGGTCTCGCTGCAGCCTGACCAGGTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: GERRQVTAVPKNRAR*PSPRSRCSLTRLMW
Trigger: CCACATCAACCTGGTCAGGCTGCAGCGAGACCTGGGGCTAGGCCATCTTGCTCGATTTTTCGGAACCGCAGTGACCTGTCTTCTCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp AGGCGCAGGTCACACAGGGACTGGAGGCACTTCTTCATCACAGGATaGGCCTGCTTTCCGCAAGCTTCAAAGAAGACCCCCAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RRRSHRDWRHFFITG*ACFPQASKKTPRSC
Trigger: GCAGCTCCTGGGGGTCTTCTTTGAAGCTTGCGGAAAGCAGGCCCATCCTGTGATGAAGAAGTGCCTCCAGTCCCTGTGTGACCTGCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp GAGGGGCTGCCGCCTCTCCAGCTGCAACAGGCTGCCCATACAGGTTaGAGAGGATTGGCAGGAAGTTTTTGGCAAAGCGGCTCACTTCAG +
Preference number: 5 (lower is better)
Translates to: EGLPPLQLQQAAHTG*RGLAGSFWQSGSLQ
Trigger: CTGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCCTGTTGCAGCTGGAGAGGCGGCAGCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CAGGAGAGGACCCATCGGAGAGCAGAGGTGGAGCCACTGCTCGCCTaGGCAGACATGATGTCCATGAAGGCTTTGGAGGTATCAGAGAAC +
Preference number: 5 (lower is better)
Translates to: QERTHRRAEVEPLLA*ADMMSMKALEVSEN
Trigger: GTTCTCTGATACCTCCAAAGCCTTCATGGACATCATGTCTGCGCAGGCGAGCAGTGGCTCCACCTCTGCTCTCCGATGGGTCCTCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp TCAGCCTCTGCCTCACAGCCCTTAGTGATGAGGGTACGTAGGGCCTaGCACACAGTGACCCTCAGGTCTGGGCGTTCATTGATAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SASASQPLVMRVRRA*HTVTLRSGRSLIAV
Trigger: CACAGCTATCAATGAACGCCCAGACCTGAGGGTCACTGTGTGCCAGGCCCTACGTACCCTCATCACTAAGGGCTGTGAGGCAGAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp CGCTGCAGAGCGTCTTCCTGGTTGGAGCCAAATCGCAGGAAAGCATaGCCCATCTCCACCAGCAAGGTAAACGCACTCTTCCTTGCACCC +
Preference number: 5 (lower is better)
Translates to: RCRASSWLEPNRRKA*PISTSKVNALFLAP
Trigger: GGGTGCAAGGAAGAGTGCGTTTACCTTGCTGGTGGAGATGGGCCATGCTTTCCTGCGATTTGGCTCCAACCAGGAAGACGCTCTGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCATCAGGGGCTTGGCTTTaGCCCAGGCTCAGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKASGAWL*PRLRVP
Trigger: GGGGACCCTGAGCCTGGGCAAAAGCCAAGCCCCTGA...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCCCAGGCCTCCAGGTCTaGCTTCCGAAGGAGGATGGC +
Preference number: 5 (lower is better)
Translates to: HTQTTVITLLSWPHWTESPGLQV*LPKEDG
Trigger: GCCATCCTCCTTCGGAAGCAAGACCTGGAGGCCTGG...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp GGCAGGGGCCTTTTCACCAAACATGAAGTCACTGCCCTTGAGAACTaGGCACACTCCGTGCTGAGCAGCCTTACGGATCTTCGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: GRGLFTKHEVTALEN*AHSVLSSLTDLRLG
Trigger: GCCAAGCCGAAGATCCGTAAGGCTGCTCAGCACGGAGTGTGCTCAGTTCTCAAGGGCAGTGACTTCATGTTTGGTGAAAAGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp AGGGTGCTAGGGCTGGGCTTGGCATGGAAGAGGTTATGGAAGGCCTaGATGGCACAGGCTGTCACAAGCACATGGTTCAAGGTCATGACC +
Preference number: 5 (lower is better)
Translates to: RVLGLGLAWKRLWKA*MAQAVTSTWFKVMT
Trigger: GGTCATGACCTTGAACCATGTGCTTGTGACAGCCTGTGCCATGCAGGCCTTCCATAACCTCTTCCATGCCAAGCCCAGCCCTAGCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp AGGTCACACAGGGACTGGAGGCACTTCTTCATCACAGGATGGGCCTaGTTTCCGCAAGCTTCAAAGAAGACCCCCAGGAGCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: RSHRDWRHFFITGWA*FPQASKKTPRSCST
Trigger: TGTGCTGCAGCTCCTGGGGGTCTTCTTTGAAGCTTGCGGAAAGCAGGCCCATCCTGTGATGAAGAAGTGCCTCCAGTCCCTGTGTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp GTCATCAGAGCAGCAAAGTACTCGGTCTCCGTCTCCTTGCCTCCCTaGGATCGAATCACCTCTGTAACAGCAGCCAGCACAGCGCAGATC +
Preference number: 5 (lower is better)
Translates to: VIRAAKYSVSVSLPP*DRITSVTAASTAQI
Trigger: GATCTGCGCTGTGCTGGCTGCTGTTACAGAGGTGATTCGATCCCAGGGAGGCAAGGAGACGGAGACCGAGTACTTTGCTGCTCTGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp CGCCTCTCCAGCTGCAACAGGCTGCCCATACAGGTTGAAGAGGATTaGCAGGAAGTTTTTGGCAAAGCGGCTCACTTCAGCTCGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RLSSCNRLPIQVEED*QEVFGKAAHFSSVS
Trigger: GCTGACCGAGCTGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCCTGTTGCAGCTGGAGAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCAGGTCTGGGCGTTCATaGATAGCTGTGCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SWELERGPGPQQRTAPFPRSGRS*IAVPRV
Trigger: GACTCTGGGCACAGCTATCAATGAACGCCCAGACCT...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp TCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACAGCTCCATTCCCCGGCTGCCCATACAGGTaGAAGAGGATTGGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SWELERGPGPQQRTAPFPGCPYR*KRIGRK
Trigger: CTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCC...GGGGAATGGAGCTGTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp TACAGTCAGACAAGCCACTCAGAAACGTGCCCGAGGACTTCTCGGTaGAAGCCACCTCTGGATCTTGGTCCATGGTCGTCTCAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: YSQTSHSETCPRTSR*KPPLDLGPWSSQGL
Trigger: AAGCCCCTGAGACGACCATGGACCAAGATCCAGAGGTGGCTTTCACCGAGAAGTCCTCGGGCACGTTTCTGAGTGGCTTGTCTGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp CCAAACATGAAGTCACTGCCCTTGAGAACTGAGCACACTCCGTGCTaGGCAGCCTTACGGATCTTCGGCTTGGCATGCACGGTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PNMKSLPLRTEHTPC*AALRIFGLACTVKL
Trigger: GAGCTTCACCGTGCATGCCAAGCCGAAGATCCGTAAGGCTGCTCAGCACGGAGTGTGCTCAGTTCTCAAGGGCAGTGACTTCATGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CCTTCCGGGAAGCAGGGCAGCATGTCCTTCAGCAGTGTTAGCATATaGAGCGTGGTGGTGGCCTCTTTGGAACCTCCAGACTTCTCAATC +
Preference number: 5 (lower is better)
Translates to: PSGKQGSMSFSSVSI*SVVVASLEPPDFSI
Trigger: GATTGAGAAGTCTGGAGGTTCCAAAGAGGCCACCACCACGCTGCATATGCTAACACTGCTGAAGGACATGCTGCCCTGCTTCCCGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CTTTACATCGCCTTTTGCCTTCTTGGCCTTGTATTCAGCTCCAGGTaGAGCCTTCTTAGCCACAGGGCGATGGATGCCAGAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LYIAFCLLGLVFSSR*SLLSHRAMDARASS
Trigger: GCTGGAGGCTCTGGCATCCATCGCCCTGTGGCTAAGAAGGCTGCACCTGGAGCTGAATACAAGGCCAAGAAGGCAAAAGGCGATGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp CCTCTTTGGAACCTCCAGACTTCTCAATCTCCTGGATGCAGAACTTaGCAGTGGAGACGGCAGCAGGATGATGGGCAGGGGCCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: PLWNLQTSQSPGCRT*QWRRQQDDGQGPFH
Trigger: GTGAAAAGGCCCCTGCCCATCATCCTGCTGCCGTCTCCACTGCCAAGTTCTGCATCCAGGAGATTGAGAAGTCTGGAGGTTCCAAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACTTCCAGCGCTTCAACTaGGCCGAGACACCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: DLTHADHSHHSALMATLDFQRFN*AETPEG
Trigger: GCCCTCTGGTGTCTCGGCCAAGTTGAAGCGCTGGAA...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACTCGGTCTCCGTCTCCTaGCCTCCCTGGGATCGAATC +
Preference number: 5 (lower is better)
Translates to: DLTHADHSHHSALMATLDSVSVS*PPWDRI
Trigger: GATTCGATCCCAGGGAGGCAAGGAGACGGAGACCGA...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCCCCACTGACACCTCCTaGGTGCACAGGATCACCTCT +
Preference number: 5 (lower is better)
Translates to: HTQTTVITLLSWPHWTESPTDTS*VHRITS
Trigger: AGAGGTGATCCTGTGCACCAAGGAGGTGTCAGTGGG...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTTGGGATCCAGGAAGTaGAGGGGCTCATCGCCACCA +
Preference number: 5 (lower is better)
Translates to: PHWTESRAPLKAFSEVATLGSRK*RGSSPP
Trigger: TGGTGGCGATGAGCCCCTCAACTTCCTGGATCCCAA...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp CCTGGCTCAGGGCACGATGCTTCTTGGCTCGGGTCTCAGCTTTCCTaGTGTTTATCAGGACTTTGTGGTATTCTGCGGGTAGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: PGSGHDASWLGSQLS*CLSGLCGILRVADP
Trigger: AGGGTCTGCTACCCGCAGAATACCACAAAGTCCTGATAAACATCAGGAAAGCTGAGACCCGAGCCAAGAAGCATCGTGCCCTGAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp AGCTTCAAAGAAGACCCCCAGGAGCTGCAGCACAGAGCTCCAGGCTaGATGAAATTTGTATGTGAGGCCCTCTTCCACTGCCCTGAACAT +
Preference number: 5 (lower is better)
Translates to: SFKEDPQELQHRAPG*MKFVCEALFHCPEH
Trigger: ATGTTCAGGGCAGTGGAAGAGGGCCTCACATACAAATTTCATGCAGCCTGGAGCTCTGTGCTGCAGCTCCTGGGGGTCTTCTTTGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CAAGAGGTGGGTCAGAGCCAAAATGCTGCAACTAACTGTGGTAACTaGACCCAGAAGGCCAGGATAGATGAGGACAAGGTACCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QEVGQSQNAATNCGN*TQKARIDEDKVPLQ
Trigger: CTGCAGCGGTACCTTGTCCTCATCTATCCTGGCCTTCTGGGTGCAGTTACCACAGTTAGTTGCAGCATTTTGGCTCTGACCCACCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CCTCATCCTCAGAGTCAGCCAAAATCTCCTCAATGCTGTCACCTTTaGTCTGGACAGGCTCCTCTTCCTCTTCCTCCTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PHPQSQPKSPQCCHL*SGQAPLPLPPLPPP
Trigger: AGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAGCCTGTCCAGAGCAAAGGTGACAGCATTGAGGAGATTTTGGCTGACTCTGAGGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp CTGGAGCTTCACCTTCTTCCTGCGGTTGAGCTTGGATCTGTTGAGTaGAACGTACGCATAGGGATCCAGGCGGCCCTTCTTCTTTACATC +
Preference number: 5 (lower is better)
Translates to: LELHLLPAVELGSVE*NVRIGIQAALLLYI
Trigger: GATGTAAAGAAGAAGGGCCGCCTGGATCCCTATGCGTACGTTCCACTCAACAGATCCAAGCTCAACCGCAGGAAGAAGGTGAAGCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCACATTGGACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGATGAAGTCACTGCCCTaGAGAACTGAGCACACTCCG +
Preference number: 5 (lower is better)
Translates to: PHWTESRAPLKAFSEVATMKSLP*RTEHTP
Trigger: CGGAGTGTGCTCAGTTCTCAAGGGCAGTGACTTCAT...CGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGTCCAATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCGTGCTAGGGCTGGGCTaGGCATGGAAGAGGTTATGG +
Preference number: 5 (lower is better)
Translates to: TESRAPLKAFSEVATSHFVLGLG*AWKRLW
Trigger: CCATAACCTCTTCCATGCCAAGCCCAGCCCTAGCAC...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCGTGACGATCTGGGCGTaGAGTTCTGCTGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: TESRAPLKAFSEVATSHFVTIWA*SSADRV
Trigger: CACCCTGTCAGCAGAACTCAACGCCCAGATCGTCAC...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCATGCAGCCTGACCAGGTaGATGTGGGCTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKACSLTR*MWAFSM
Trigger: CATGGAGAAAGCCCACATCAACCTGGTCAGGCTGCA...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 90 bp TCAAAGAAGACCCCCAGGAGCTGCAGCACAGAGCTCCAGGCTGCATaGAATTTGTATGTGAGGCCCTCTTCCACTGCCCTGAACATCTTA +
Preference number: 5 (lower is better)
Translates to: SKKTPRSCSTELQAA*NLYVRPSSTALNIL
Trigger: TAAGATGTTCAGGGCAGTGGAAGAGGGCCTCACATACAAATTTCATGCAGCCTGGAGCTCTGTGCTGCAGCTCCTGGGGGTCTTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp AACTTCCCAATGGCTTCCATCACTAGCTGCACATGCTTAGCAAGGTaGACCACGTCCATGACCACCACAGCAACCTTGATGAAGCCTAGC +
Preference number: 5 (lower is better)
Translates to: NFPMASITSCTCLAR*TTSMTTTATLMKPS
Trigger: GCTAGGCTTCATCAAGGTTGCTGTGGTGGTCATGGACGTGGTGCACCTTGCTAAGCATGTGCAGCTAGTGATGGAAGCCATTGGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp TCCACTGTGCTGGTCCCCATCAGCCCTTTGAACTCAAACAAGAGGTaGGTCAGAGCCAAAATGCTGCAACTAACTGTGGTAACTGCACCC +
Preference number: 5 (lower is better)
Translates to: STVLVPISPLNSNKR*VRAKMLQLTVVTAP
Trigger: GGGTGCAGTTACCACAGTTAGTTGCAGCATTTTGGCTCTGACCCACCTCTTGTTTGAGTTCAAAGGGCTGATGGGGACCAGCACAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp TCCTCAGAGTCAGCCAAAATCTCCTCAATGCTGTCACCTTTGCTCTaGACAGGCTCCTCTTCCTCTTCCTCCTCTTCCTCCTCCTCTACA +
Preference number: 5 (lower is better)
Translates to: SSESAKISSMLSPLL*TGSSSSSSSSSSST
Trigger: TGTAGAGGAGGAGGAAGAGGAGGAAGAGGAAGAGGAGCCTGTCCAGAGCAAAGGTGACAGCATTGAGGAGATTTTGGCTGACTCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAGAGCGTCTTCCTGGTaGGAGCCAAATCGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQRASSW*EPNRRK
Trigger: TTTCCTGCGATTTGGCTCCAACCAGGAAGACGCTCT...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CTGCCACTGGAGTGTATCATAAATCTTCGACTCCACTGTGCTGCCTaGCTGAGCCAGGTCCATTGCTTTTCTCTTAAGAGTGGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: LPLECIINLRLHCAA*LSQVHCFSLKSGGQ
Trigger: TTGGCCACCACTCTTAAGAGAAAAGCAATGGACCTGGCTCAGGCAGGCAGCACAGTGGAGTCGAAGATTTATGATACACTCCAGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp TTGCGGGTGAACTTGATGAACAGGTTCCGAAGCTTCATCCGGAAGTaGCGTCGCATGTCATCTGACAACTTCCCAATGGCTTCCATCACT +
Preference number: 5 (lower is better)
Translates to: LRVNLMNRFRSFIRK*RRMSSDNFPMASIT
Trigger: AGTGATGGAAGCCATTGGGAAGTTGTCAGATGACATGCGACGGCACTTCCGGATGAAGCTTCGGAACCTGTTCATCAAGTTCACCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 90 bp CTTCTTCCTCATCCTCATCCTCAGAGTCAGCCAAAATCTCCTCAATaGTGTCACCTTTGCTCTGGACAGGCTCCTCTTCCTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LLPHPHPQSQPKSPQ*CHLCSGQAPLPLPP
Trigger: AGGAGGAAGAGGAAGAGGAGCCTGTCCAGAGCAAAGGTGACAGCATTGAGGAGATTTTGGCTGACTCTGAGGATGAGGATGAGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGGTCGTCTCAGGGGCTaGGCTTTTGCCCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PRHLSLLEMSPASNESFSGRLRG*AFAQAQ
Trigger: CTGAGCCTGGGCAAAAGCCAAGCCCCTGAGACGACC...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCCCACTGCTTCCATTGTaGTCATCAGAGCAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: HTQTTVITLLSWPHWTESPLLPL*SSEQQS
Trigger: ACTTTGCTGCTCTGATGACAACAATGGAAGCAGTGG...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp TCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAACTTGCGGGTGAACTaGATGAACAGGTTCCGAAGC +
Preference number: 5 (lower is better)
Translates to: SYTRRPQSSLCSHGHIGQNLRVN*MNRFRS
Trigger: GCTTCGGAACCTGTTCATCAAGTTCACCCGCAAGTT...CTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACTCAATGCTGTCACCTTaGCTCTGGACAGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENSMLSP*LWTGSS
Trigger: AGAGGAGCCTGTCCAGAGCAAAGGTGACAGCATTGA...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp TTGGTGTTAAACATCATGGGAGTTAGAAAGGGGCCCTGGACCACAGCAGAGAACTTCCTGCGGTTGAGCTaGGATCTGTTGAGTGGAACG +
Preference number: 5 (lower is better)
Translates to: LVLNIMGVRKGPWTTAENFLRLS*DLLSGT
Trigger: CGTTCCACTCAACAGATCCAAGCTCAACCGCAGGAA...GTTCTCTGCTGTGGTCCAGGGCCCCTTTCTAACTCCCATGATGTTTAACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCATGTCCATGAAGGCTTaGGAGGTATCAGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: HTQTTVITLLSWPHWTESMSMKA*EVSENF
Trigger: GAAGTTCTCTGATACCTCCAAAGCCTTCATGGACAT...GCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp ACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACAGAAAGCAATTGGCAGGAAGTTTTaGGCAAAGCGGCTCACTTCA +
Preference number: 5 (lower is better)
Translates to: TRRPQSSLCSHGHIGQKAIGRKF*AKRLTS
Trigger: TGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAAT...TGCTTTCTGTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTAGCTTCCGCTGCTCCTaGCCCCGGCCTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PRHLSLLEMSPASNESFSSFRCS*PRPLSS
Trigger: AGAAGAAAGAGGCCGGGGCAAGGAGCAGCGGAAGCT...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTTCCTTTCTGCGGAGTTaGTGTCCCGCCTGGGATCCC +
Preference number: 5 (lower is better)
Translates to: PRHLSLLEMSPASNESFSSFLRS*CPAWDP
Trigger: GGGATCCCAGGCGGGACACAAACTCCGCAGAAAGGA...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 90 bp TTCTTGGCTCGGGTCTCAGCTTTCCTGATGTTTATCAGGACTTTGTaGTATTCTGCGGGTAGCAGACCCTTCACCAACTCGAATCCAAAC +
Preference number: 5 (lower is better)
Translates to: FLARVSAFLMFIRTL*YSAGSRPFTNSNPN
Trigger: GTTTGGATTCGAGTTGGTGAAGGGTCTGCTACCCGCAGAATACCACAAAGTCCTGATAAACATCAGGAAAGCTGAGACCCGAGCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp GATCTTACACACGCAGACCACAGTCATCACTCTGCTCTCATGGCCACATTGGACCAGAAGCGCTGCACTTaGCTGAAAGTGACATTTGTA +
Preference number: 5 (lower is better)
Translates to: DLTHADHSHHSALMATLDQKRCT*LKVTFV
Trigger: TACAAATGTCACTTTCAGCAAAGTGCAGCGCTTCTG...GTCCAATGTGGCCATGAGAGCAGAGTGATGACTGTGGTCTGCGTGTGTAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp ACAGAAAGCAGAGCACCACTTAAGGCCTTCTCAGAGGTAGCGACGTCACATTTCACTCCACTGCTTCCATaGTTGTCATCAGAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TESRAPLKAFSEVATSHFTPLLP*LSSEQQ
Trigger: TTGCTGCTCTGATGACAACAATGGAAGCAGTGGAGT...GAAATGTGACGTCGCTACCTCTGAGAAGGCCTTAAGTGGTGCTCTGCTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCTCCTGGATGCAGAACTaGGCAGTGGAGACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: RHLSLLEMSPASNESFSVSWMQN*AVETAA
Trigger: TGCTGCCGTCTCCACTGCCAAGTTCTGCATCCAGGA...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTACCACCACAGCAACCTaGATGAAGCCTAGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: PRHLSLLEMSPASNESFSTTTAT*MKPSAD
Trigger: GTCCGCGCTAGGCTTCATCAAGGTTGCTGTGGTGGT...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp ATGTCTCCAAAGGACAATAGTTTCCAAAATCCTAGGCATCTATCTCTCTTAGAACCACATCTGTGGGCCTaGTGCAGAACCCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: MSPKDNSFQNPRHLSLLEPHLWA*CRTQAG
Trigger: TCCTGCCTGGGTTCTGCACAAGGCCCACAGATGTGG...TTCTAAGAGAGATAGATGCCTAGGATTTTGGAAACTATTGTCCTTTGGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp AGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTGTCCCATCAGCACTCAACTaGAAGCCATGGTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RHLSLLEMSPASNESFSVPSALN*KPWSLF
Trigger: GAAGAGGGACCATGGCTTCAAGTTGAGTGCTGATGG...GACAGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS-3UTR CAA 90 bp CCTAGGCATCTATCTCTCTTAGAAATGAGTCCTGCTTCCAATGAGTCATTCTCTTTTGCCTTCTTGGCCTaGTATTCAGCTCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: PRHLSLLEMSPASNESFSFAFLA*YSAPGA
Trigger: TGCACCTGGAGCTGAATACAAGGCCAAGAAGGCAAA...AGAGAATGACTCATTGGAAGCAGGACTCATTTCTAAGAGAGATAGATGCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp GGGCGGCTGAAGAAGCGGCTCCGAGCGGCCTGGCGATaGCGGCAAGTGGCGGGGTTGCTGTCGCTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GRLKKRLRAAWR*RQVAGLLSLLW
Trigger: CCACAGCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCCAGGCCGCTCGGAGCCGCTTCTTCAGCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp CCAAGGGCACGGCCTGCAACACCACCTCGGGACCCATaGTGGTCACTGCAGCCCCTACAGCCTGGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PRARPATPPRDP*WSLQPLQPGPG
Trigger: CCCTGGACCAGGCTGTAGGGGCTGCAGTGACCAGCATGGGTCCCGAGGTGGTGTTGCAGGCCGTGCCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp AGGGCACGGCCTGCAACACCACCTCGGGACCCATGCTaGTCACTGCAGCCCCTACAGCCTGGTCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: RARPATPPRDPC*SLQPLQPGPGL
Trigger: CAGCCCTGGACCAGGCTGTAGGGGCTGCAGTGACCAGCATGGGTCCCGAGGTGGTGTTGCAGGCCGTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp GGCTCTGCACGAAGCGGGCTGCCGGGCCCTGAGAACTaGCACACACCTCCTCCAGCACGCGGTAGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: GSARSGLPGPEN*HTPPPARGRPS
Trigger: AGAAGGCCTACCGCGTGCTGGAGGAGGTGTGTGCCAGTTCTCAGGGCCCGGCAGCCCGCTTCGTGCAGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp CCATGGTCCCTCTTCTTGCCCCGCCCAGGCCCAGGCTaGGTGGCAAGGACTCGATGGGCCACCTTGGGATCC +
Preference number: 6 (lower is better)
Translates to: PWSLFLPRPGPG*VARTRWATLGS
Trigger: GGATCCCAAGGTGGCCCATCGAGTCCTTGCCACCCAGCCTGGGCCTGGGCGGGGCAAGAAGAGGGACCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp CTCCGAGCGGCCTGGCGATGGCGGCAAGTGGCGGGGTaGCTGTCGCTGCTGTGGCCTTTCTTCCAGCGCTTC +
Preference number: 6 (lower is better)
Translates to: LRAAWRWRQVAG*LSLLWPFFQRF
Trigger: GAAGCGCTGGAAGAAAGGCCACAGCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCCAGGCCGCTCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp CCCCGCCCAGGCCCAGGCTGGGTGGCAAGGACTCGATGGGCCACCTaGGGATCCAGGAAGTTGAGGGGCTCATCGCCACCACCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: PRPGPGWVARTRWAT*GSRKLRGSSPPPSF
Trigger: GAAGGAAGGTGGTGGCGATGAGCCCCTCAACTTCCTGGATCCCAAGGTGGCCCATCGAGTCCTTGCCACCCAGCCTGGGCCTGGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 72 bp CATCAACAGTCAGGTCGCTCTTTCCTGACGGGCGGCTaGAGAAGCGGCTCCGAGCGGCCTGGCGATGGCGGC +
Preference number: 6 (lower is better)
Translates to: HQQSGRSFLTGG*RSGSERPGDGG
Trigger: GCCGCCATCGCCAGGCCGCTCGGAGCCGCTTCTTCAGCCGCCCGTCAGGAAAGAGCGACCTGACTGTTGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp TCCGAGCGGCCTGGCGATGGCGGCAAGTGGCGGGGTTaGTGTCGCTGCTGTGGCCTTTCTTCCAGCGCTTCA +
Preference number: 6 (lower is better)
Translates to: SERPGDGGKWRG*CRCCGLSSSAS
Trigger: TGAAGCGCTGGAAGAAAGGCCACAGCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCCAGGCCGCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp CCTGGCGATGGCGGCAAGTGGCGGGGTTGCTGTCGCTaGTGTGGCCTTTCTTCCAGCGCTTCAACTTGGCCG +
Preference number: 6 (lower is better)
Translates to: PGDGGKWRGCCR*CGLSSSASTWP
Trigger: CGGCCAAGTTGAAGCGCTGGAAGAAAGGCCACAGCAGCGACAGCAACCCCGCCACTTGCCGCCATCGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GTTGAGGGGCTCATCGCCACCACCTTCCTTCAGCCATaGCCGGCTCCTCTGTCGTGCCAGCTTCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: VEGLIATTFLQP*PAPLSCQLPLL
Trigger: GAGCAGCGGAAGCTGGCACGACAGAGGAGCCGGGCATGGCTGAAGGAAGGTGGTGGCGATGAGCCCCTCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp GGCTGGGTGGCAAGGACTCGATGGGCCACCTTGGGATCCAGGAAGTaGAGGGGCTCATCGCCACCACCTTCCTTCAGCCATGCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: GWVARTRWATLGSRK*RGSSPPPSFSHARL
Trigger: GAGCCGGGCATGGCTGAAGGAAGGTGGTGGCGATGAGCCCCTCAACTTCCTGGATCCCAAGGTGGCCCATCGAGTCCTTGCCACCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp CTTCAGATCATCCAGGTGGCTCTGCACGAAGCGGGCTaGCGGGCCCTGAGAACTGGCACACACCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LQIIQVALHEAG*RALRTGTHLLQ
Trigger: CTGGAGGAGGTGTGTGCCAGTTCTCAGGGCCCGGCAGCCCGCTTCGTGCAGAGCCACCTGGATGATCTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp AGCCATGCCCGGCTCCTCTGTCGTGCCAGCTTCCGCTaGTCCTTGCCCCGGCCTCTTTCTTCTTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: SHARLLCRASFR*SLPRPLSSSSS
Trigger: GGATGAGGAAGAAGAAAGAGGCCGGGGCAAGGAGCAGCGGAAGCTGGCACGACAGAGGAGCCGGGCATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp CCATCTTCCTCCTCCCGTATGATCAGCCGGCCATCAGCACTCAACTaGAAGCCATGGTCCCTCTTCTTGCCCCGCCCAGGCCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: PSSSSRMISRPSALN*KPWSLFLPRPGPGW
Trigger: CCAGCCTGGGCCTGGGCGGGGCAAGAAGAGGGACCATGGCTTCAAGTTGAGTGCTGATGGCCGGCTGATCATACGGGAGGAGGAAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp ATGGTACACCTGAAGGGTGATGGGATAGCCCCAGGCCTCCAGGTCTaGCTTCCGAAGGAGGATGGCCAGGCAGGAGAGGACCCATCGGAG +
Preference number: 6 (lower is better)
Translates to: MVHLKGDGIAPGLQV*LPKEDGQAGEDPSE
Trigger: CTCCGATGGGTCCTCTCCTGCCTGGCCATCCTCCTTCGGAAGCAAGACCTGGAGGCCTGGGGCTATCCCATCACCCTTCAGGTGTACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GTCTCCTCAGAGCCATCGATTTCCAAGGGCACGGCCTaGAACACCACCTCGGGACCCATGCTGGTCACTGCA +
Preference number: 6 (lower is better)
Translates to: VSSEPSISKGTA*NTTSGPMLVTA
Trigger: TGCAGTGACCAGCATGGGTCCCGAGGTGGTGTTGCAGGCCGTGCCCTTGGAAATCGATGGCTCTGAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp TCCTCCCGTATGATCAGCCGGCCATCAGCACTCAACTaGAAGCCATGGTCCCTCTTCTTGCCCCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SSRMISRPSALN*KPWSLFLPRPG
Trigger: GCCTGGGCGGGGCAAGAAGAGGGACCATGGCTTCAAGTTGAGTGCTGATGGCCGGCTGATCATACGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp TGTCGCTGCTGTGGCCTTTCTTCCAGCGCTTCAACTTaGCCGAGACACCAGAGGGCAATTTCCCCGAGCGAC +
Preference number: 6 (lower is better)
Translates to: CRCCGLSSSAST*PRHQRAISPSD
Trigger: GTCGCTCGGGGAAATTGCCCTCTGGTGTCTCGGCCAAGTTGAAGCGCTGGAAGAAAGGCCACAGCAGCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp AGACAGGTCACTGCGGTTCCGAAAAATCGAGCAAGATaGCCTAGCCCCAGGTCTCGCTGCAGCCTGACCAGG +
Preference number: 6 (lower is better)
Translates to: RQVTAVPKNRAR*PSPRSRCSLTR
Trigger: CCTGGTCAGGCTGCAGCGAGACCTGGGGCTAGGCCATCTTGCTCGATTTTTCGGAACCGCAGTGACCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp GCCTCACAGCCCTTAGTGATGAGGGTACGTAGGGCCTaGCACACAGTGACCCTCAGGTCTGGGCGTTCATTG +
Preference number: 6 (lower is better)
Translates to: ASQPLVMRVRRA*HTVTLRSGRSL
Trigger: CAATGAACGCCCAGACCTGAGGGTCACTGTGTGCCAGGCCCTACGTACCCTCATCACTAAGGGCTGTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp TTTCTGCGGAGTTTGTGTCCCGCCTGGGATCCCCGCTaGGTGGCTTTCACCAGACCTTTAAACTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: FLRSLCPAWDPR*VAFTRPLNCPW
Trigger: CCAGGGGCAGTTTAAAGGTCTGGTGAAAGCCACCCAGCGGGGATCCCAGGCGGGACACAAACTCCGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp CTGTCGCTGCTGTGGCCTTTCTTCCAGCGCTTCAACTaGGCCGAGACACCAGAGGGCAATTTCCCCGAGCGA +
Preference number: 6 (lower is better)
Translates to: LSLLWPFFQRFN*AETPEGNFPER
Trigger: TCGCTCGGGGAAATTGCCCTCTGGTGTCTCGGCCAAGTTGAAGCGCTGGAAGAAAGGCCACAGCAGCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GCCCGAGGACTTCTCGGTGAAAGCCACCTCTGGATCTaGGTCCATGGTCGTCTCAGGGGCTTGGCTTTTGCC +
Preference number: 6 (lower is better)
Translates to: ARGLLGESHLWI*VHGRLRGLAFA
Trigger: GGCAAAAGCCAAGCCCCTGAGACGACCATGGACCAAGATCCAGAGGTGGCTTTCACCGAGAAGTCCTCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp ACCACCACAGCAACCTTGATGAAGCCTAGCGCGGACTaGACCACATCACGGGTTCGAGAGGCCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: TTTATLMKPSAD*TTSRVREASSR
Trigger: CCTGCTGCTGGCCTCTCGAACCCGTGATGTGGTCAAGTCCGCGCTAGGCTTCATCAAGGTTGCTGTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp CAGAAACGTGCCCGAGGACTTCTCGGTGAAAGCCACCTCTGGATCTaGGTCCATGGTCGTCTCAGGGGCTTGGCTTTTGCCCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: QKRARGLLGESHLWI*VHGRLRGLAFAQAQ
Trigger: CTGAGCCTGGGCAAAAGCCAAGCCCCTGAGACGACCATGGACCAAGATCCAGAGGTGGCTTTCACCGAGAAGTCCTCGGGCACGTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp ACGTCCATGACCACCACAGCAACCTTGATGAAGCCTAGCGCGGACTaGACCACATCACGGGTTCGAGAGGCCAGCAGCAGGCACACGTTC +
Preference number: 6 (lower is better)
Translates to: TSMTTTATLMKPSAD*TTSRVREASSRHTF
Trigger: GAACGTGTGCCTGCTGCTGGCCTCTCGAACCCGTGATGTGGTCAAGTCCGCGCTAGGCTTCATCAAGGTTGCTGTGGTGGTCATGGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp CGAGGGGCTGCCGCCTCTCCAGCTGCAACAGGCTGCCCATACAGGTaGAAGAGGATTGGCAGGAAGTTTTTGGCAAAGCGGCTCACTTCA +
Preference number: 6 (lower is better)
Translates to: RGAAASPAATGCPYR*KRIGRKFLAKRLTS
Trigger: TGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCCTGTTGCAGCTGGAGAGGCGGCAGCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp ACCCATCGGAGAGCAGAGGTGGAGCCACTGCTCGCCTaGGCAGACATGATGTCCATGAAGGCTTTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: THRRAEVEPLLA*ADMMSMKALEV
Trigger: TACCTCCAAAGCCTTCATGGACATCATGTCTGCGCAGGCGAGCAGTGGCTCCACCTCTGCTCTCCGATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GATCCCCGCTGGGTGGCTTTCACCAGACCTTTAAACTaGCCCTGGAGCTTCACCTTCTTCCTGCGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: DPRWVAFTRPLN*PWSFTFFLRLS
Trigger: GCTCAACCGCAGGAAGAAGGTGAAGCTCCAGGGGCAGTTTAAAGGTCTGGTGAAAGCCACCCAGCGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp AAACGTGCCCGAGGACTTCTCGGTGAAAGCCACCTCTaGATCTTGGTCCATGGTCGTCTCAGGGGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: KRARGLLGESHL*ILVHGRLRGLA
Trigger: AGCCAAGCCCCTGAGACGACCATGGACCAAGATCCAGAGGTGGCTTTCACCGAGAAGTCCTCGGGCACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp AGGGTGCTAGGGCTGGGCTTGGCATGGAAGAGGTTATaGAAGGCCTGCATGGCACAGGCTGTCACAAGCACA +
Preference number: 6 (lower is better)
Translates to: RVLGLGLAWKRL*KACMAQAVTST
Trigger: TGTGCTTGTGACAGCCTGTGCCATGCAGGCCTTCCATAACCTCTTCCATGCCAAGCCCAGCCCTAGCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GCAAGGTGCACCACGTCCATGACCACCACAGCAACCTaGATGAAGCCTAGCGCGGACTTGACCACATCACGG +
Preference number: 6 (lower is better)
Translates to: ARCTTSMTTTAT*MKPSADLTTSR
Trigger: CCGTGATGTGGTCAAGTCCGCGCTAGGCTTCATCAAGGTTGCTGTGGTGGTCATGGACGTGGTGCACCTTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 72 bp AAGTCACTGCCCTTGAGAACTGAGCACACTCCGTGCTaGGCAGCCTTACGGATCTTCGGCTTGGCATGCACG +
Preference number: 6 (lower is better)
Translates to: KSLPLRTEHTPC*AALRIFGLACT
Trigger: CGTGCATGCCAAGCCGAAGATCCGTAAGGCTGCTCAGCACGGAGTGTGCTCAGTTCTCAAGGGCAGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 72 bp AGAAACCAAGCCTGGTTTCCCGAACATGATCCCGGATaGCAGGCAGCAGCCAGCTCCGTGGGAAATCCAGAG +
Preference number: 6 (lower is better)
Translates to: RNQAWFPEHDPG*QAAASSVGNPE
Trigger: CTCTGGATTTCCCACGGAGCTGGCTGCTGCCTGTCATCCGGGATCATGTTCGGGAAACCAGGCTTGGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 72 bp CCGCCTCTCCAGCTGCAACAGGCTGCCCATACAGGTTaGAGAGGATTGGCAGGAAGTTTTTGGCAAAGCGGC +
Preference number: 6 (lower is better)
Translates to: PPLQLQQAAHTG*RGLAGSFWQSG
Trigger: GCCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCCTGTTGCAGCTGGAGAGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GGGCTGGGCTTGGCATGGAAGAGGTTATGGAAGGCCTaGATGGCACAGGCTGTCACAAGCACATGGTTCAAG +
Preference number: 6 (lower is better)
Translates to: GLGLAWKRLWKA*MAQAVTSTWFK
Trigger: CTTGAACCATGTGCTTGTGACAGCCTGTGCCATGCAGGCCTTCCATAACCTCTTCCATGCCAAGCCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp TCCTCCTCCTCTACAGCAGCCTGGCTCAGGGCACGATaGTTCTTGGCTCGGGTCTCAGCTTTCCTGATGTTT +
Preference number: 6 (lower is better)
Translates to: SSSSTAAWLRAR*FLARVSAFLMF
Trigger: AAACATCAGGAAAGCTGAGACCCGAGCCAAGAAGCATCGTGCCCTGAGCCAGGCTGCTGTAGAGGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp GCAGCAAAGTACTCGGTCTCCGTCTCCTTGCCTCCCTaGGATCGAATCACCTCTGTAACAGCAGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: AAKYSVSVSLPP*DRITSVTAAST
Trigger: TGTGCTGGCTGCTGTTACAGAGGTGATTCGATCCCAGGGAGGCAAGGAGACGGAGACCGAGTACTTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp CGGCAGCCAGTGACTCTGGGGACTCCACTGCTTCCATaGTTGTCATCAGAGCAGCAAAGTACTCGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: RQPVTLGTPLLP*LSSEQQSTRSP
Trigger: CGGAGACCGAGTACTTTGCTGCTCTGATGACAACAATGGAAGCAGTGGAGTCCCCAGAGTCACTGGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GCAATGTGTGGAGCCACACACTCCTTCAGGATCTCCTaGAGAGTCTGGGTAGCAGCCGCCGCCACTTGTGAA +
Preference number: 6 (lower is better)
Translates to: AMCGATHSFRIS*RVWVAAAATCE
Trigger: TTCACAAGTGGCGGCGGCTGCTACCCAGACTCTCAAGGAGATCCTGAAGGAGTGTGTGGCTCCACACATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GCCGCCTCTCCAGCTGCAACAGGCTGCCCATACAGGTaGAAGAGGATTGGCAGGAAGTTTTTGGCAAAGCGG +
Preference number: 6 (lower is better)
Translates to: AASPAATGCPYR*KRIGRKFLAKR
Trigger: CCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCCTGTTGCAGCTGGAGAGGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GTAAACGCACTCTTCCTTGCACCCACTGACACCTCCTaGGTGCACAGGATCACCTCTGGGATGAGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: VNALFLAPTDTS*VHRITSGMRAA
Trigger: AGCTGCCCTCATCCCAGAGGTGATCCTGTGCACCAAGGAGGTGTCAGTGGGTGCAAGGAAGAGTGCGTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp GCAACAGGCTGCCCATACAGGTTGAAGAGGATTGGCAGGAAGTTTTaGGCAAAGCGGCTCACTTCAGCTCGGTCAGCCTCTGCCTCACAG +
Preference number: 6 (lower is better)
Translates to: ATGCPYRLKRIGRKF*AKRLTSARSASASQ
Trigger: CTGTGAGGCAGAGGCTGACCGAGCTGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp ACATGCTTAGCAAGGTGCACCACGTCCATGACCACCACAGCAACCTaGATGAAGCCTAGCGCGGACTTGACCACATCACGGGTTCGAGAG +
Preference number: 6 (lower is better)
Translates to: TCLARCTTSMTTTAT*MKPSADLTTSRVRE
Trigger: CTCTCGAACCCGTGATGTGGTCAAGTCCGCGCTAGGCTTCATCAAGGTTGCTGTGGTGGTCATGGACGTGGTGCACCTTGCTAAGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 72 bp ACAAGCCACTCAGAAACGTGCCCGAGGACTTCTCGGTaGAAGCCACCTCTGGATCTTGGTCCATGGTCGTCT +
Preference number: 6 (lower is better)
Translates to: TSHSETCPRTSR*KPPLDLGPWSS
Trigger: AGACGACCATGGACCAAGATCCAGAGGTGGCTTTCACCGAGAAGTCCTCGGGCACGTTTCTGAGTGGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp AAGCAGGGCAGCATGTCCTTCAGCAGTGTTAGCATATaGAGCGTGGTGGTGGCCTCTTTGGAACCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: KQGSMSFSSVSI*SVVVASLEPPD
Trigger: GTCTGGAGGTTCCAAAGAGGCCACCACCACGCTGCATATGCTAACACTGCTGAAGGACATGCTGCCCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp CGACTCCACTGTGCTGCCTGCCTGAGCCAGGTCCATTaGTTTTCTCTTAAGAGTGGTGGCCAAGGGCAAGAA +
Preference number: 6 (lower is better)
Translates to: RLHCAACLSQVH*FSLKSGGQGQE
Trigger: TTCTTGCCCTTGGCCACCACTCTTAAGAGAAAAGCAATGGACCTGGCTCAGGCAGGCAGCACAGTGGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GGGATCCAGGCGGCCCTTCTTCTTTACATCGCCTTTTaGCTTCTTGGCCTTGTATTCAGCTCCAGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: GIQAALLLYIAF*LLGLVFSSRCS
Trigger: GCTGCACCTGGAGCTGAATACAAGGCCAAGAAGGCAAAAGGCGATGTAAAGAAGAAGGGCCGCCTGGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp CCCTCTTCCACTGCCCTGAACATCTTAGTGATGTACTaGGGAGGACCTGAGGCTGAAGAGGTCACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: PSSTALNILVMY*GGPEAEEVTEP
Trigger: TGGCTCTGTGACCTCTTCAGCCTCAGGTCCTCCCCAGTACATCACTAAGATGTTCAGGGCAGTGGAAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp TCACACAGGGACTGGAGGCACTTCTTCATCACAGGATaGGCCTGCTTTCCGCAAGCTTCAAAGAAGACCCCC +
Preference number: 6 (lower is better)
Translates to: SHRDWRHFFITG*ACFPQASKKTP
Trigger: GGGGGTCTTCTTTGAAGCTTGCGGAAAGCAGGCCCATCCTGTGATGAAGAAGTGCCTCCAGTCCCTGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp AACATGATCCCGGATGACAGGCAGCAGCCAGCTCCGTaGGAAATCCAGAGTCTCCTCAGAGCCATCGATTTC +
Preference number: 6 (lower is better)
Translates to: NMIPDDRQQPAP*EIQSLLRAIDF
Trigger: GAAATCGATGGCTCTGAGGAGACTCTGGATTTCCCACGGAGCTGGCTGCTGCCTGTCATCCGGGATCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp GCGTCTTCCTGGTTGGAGCCAAATCGCAGGAAAGCATaGCCCATCTCCACCAGCAAGGTAAACGCACTCTTC +
Preference number: 6 (lower is better)
Translates to: ASSWLEPNRRKA*PISTSKVNALF
Trigger: GAAGAGTGCGTTTACCTTGCTGGTGGAGATGGGCCATGCTTTCCTGCGATTTGGCTCCAACCAGGAAGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp CACCTTCTTCCTGCGGTTGAGCTTGGATCTGTTGAGTaGAACGTACGCATAGGGATCCAGGCGGCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: HLLPAVELGSVE*NVRIGIQAALL
Trigger: AAGAAGGGCCGCCTGGATCCCTATGCGTACGTTCCACTCAACAGATCCAAGCTCAACCGCAGGAAGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp GTGGAGCCACTGCTCGCCTGCGCAGACATGATGTCCATGAAGGCTTaGGAGGTATCAGAGAACTTCTTCATGAGCACAGGACTTGGCACC +
Preference number: 6 (lower is better)
Translates to: VEPLLACADMMSMKA*EVSENFFMSTGLGT
Trigger: GGTGCCAAGTCCTGTGCTCATGAAGAAGTTCTCTGATACCTCCAAAGCCTTCATGGACATCATGTCTGCGCAGGCGAGCAGTGGCTCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GTCATCAGAGCAGCAAAGTACTCGGTCTCCGTCTCCTaGCCTCCCTGGGATCGAATCACCTCTGTAACAGCA +
Preference number: 6 (lower is better)
Translates to: VIRAAKYSVSVS*PPWDRITSVTA
Trigger: TGCTGTTACAGAGGTGATTCGATCCCAGGGAGGCAAGGAGACGGAGACCGAGTACTTTGCTGCTCTGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp AGGAGCTGCTCCACTGTGCTGGTCCCCATCAGCCCTTaGAACTCAAACAAGAGGTGGGTCAGAGCCAAAATG +
Preference number: 6 (lower is better)
Translates to: RSCSTVLVPISP*NSNKRWVRAKM
Trigger: CATTTTGGCTCTGACCCACCTCTTGTTTGAGTTCAAAGGGCTGATGGGGACCAGCACAGTGGAGCAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp AGGGATCCAGGCGGCCCTTCTTCTTTACATCGCCTTTaGCCTTCTTGGCCTTGTATTCAGCTCCAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: RDPGGPSSLHRL*PSWPCIQLQVQ
Trigger: CTGCACCTGGAGCTGAATACAAGGCCAAGAAGGCAAAAGGCGATGTAAAGAAGAAGGGCCGCCTGGATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp TCCATTGTTGTCATCAGAGCAGCAAAGTACTCGGTCTCCGTCTCCTaGCCTCCCTGGGATCGAATCACCTCTGTAACAGCAGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: SIVVIRAAKYSVSVS*PPWDRITSVTAAST
Trigger: TGTGCTGGCTGCTGTTACAGAGGTGATTCGATCCCAGGGAGGCAAGGAGACGGAGACCGAGTACTTTGCTGCTCTGATGACAACAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp GGTAGCAGACCCTTCACCAACTCGAATCCAAACTTGCGGGTGAACTaGATGAACAGGTTCCGAAGCTTCATCCGGAAGTGCCGTCGCATG +
Preference number: 6 (lower is better)
Translates to: GSRPFTNSNPNLRVN*MNRFRSFIRKCRRM
Trigger: CATGCGACGGCACTTCCGGATGAAGCTTCGGAACCTGTTCATCAAGTTCACCCGCAAGTTTGGATTCGAGTTGGTGAAGGGTCTGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp TCCTCATCCTCAGAGTCAGCCAAAATCTCCTCAATGCTGTCACCTTaGCTCTGGACAGGCTCCTCTTCCTCTTCCTCCTCTTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSSESAKISSMLSP*LWTGSSSSSSSSSS
Trigger: GGAGGAGGAAGAGGAGGAAGAGGAAGAGGAGCCTGTCCAGAGCAAAGGTGACAGCATTGAGGAGATTTTGGCTGACTCTGAGGATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp ATGGCTTCCATCACTAGCTGCACATGCTTAGCAAGGTaGACCACGTCCATGACCACCACAGCAACCTTGATG +
Preference number: 6 (lower is better)
Translates to: MASITSCTCLAR*TTSMTTTATLM
Trigger: CATCAAGGTTGCTGTGGTGGTCATGGACGTGGTGCACCTTGCTAAGCATGTGCAGCTAGTGATGGAAGCCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GACAACTTCCCAATGGCTTCCATCACTAGCTGCACATaGTTAGCAAGGTGCACCACGTCCATGACCACCACA +
Preference number: 6 (lower is better)
Translates to: DNFPMASITSCT*LARCTTSMTTT
Trigger: TGTGGTGGTCATGGACGTGGTGCACCTTGCTAAGCATGTGCAGCTAGTGATGGAAGCCATTGGGAAGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp AGCTGCAACAGGCTGCCCATACAGGTTGAAGAGGATTaGCAGGAAGTTTTTGGCAAAGCGGCTCACTTCAGC +
Preference number: 6 (lower is better)
Translates to: SCNRLPIQVEED*QEVFGKAAHFS
Trigger: GCTGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCAGCCTGTTGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp TGCCCATACAGGTTGAAGAGGATTGGCAGGAAGTTTTaGGCAAAGCGGCTCACTTCAGCTCGGTCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: CPYRLKRIGRKF*AKRLTSARSAS
Trigger: AGAGGCTGACCGAGCTGAAGTGAGCCGCTTTGCCAAAAACTTCCTGCCAATCCTCTTCAACCTGTATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GCGGGTAGCAGACCCTTCACCAACTCGAATCCAAACTaGCGGGTGAACTTGATGAACAGGTTCCGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: AGSRPFTNSNPN*RVNLMNRFRSF
Trigger: GAAGCTTCGGAACCTGTTCATCAAGTTCACCCGCAAGTTTGGATTCGAGTTGGTGAAGGGTCTGCTACCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp TGGTATTCTGCGGGTAGCAGACCCTTCACCAACTCGAATCCAAACTaGCGGGTGAACTTGATGAACAGGTTCCGAAGCTTCATCCGGAAG +
Preference number: 6 (lower is better)
Translates to: WYSAGSRPFTNSNPN*RVNLMNRFRSFIRK
Trigger: CTTCCGGATGAAGCTTCGGAACCTGTTCATCAAGTTCACCCGCAAGTTTGGATTCGAGTTGGTGAAGGGTCTGCTACCCGCAGAATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 72 bp GGGCACGATGCTTCTTGGCTCGGGTCTCAGCTTTCCTaGTGTTTATCAGGACTTTGTGGTATTCTGCGGGTA +
Preference number: 6 (lower is better)
Translates to: GHDASWLGSQLS*CLSGLCGILRV
Trigger: TACCCGCAGAATACCACAAAGTCCTGATAAACATCAGGAAAGCTGAGACCCGAGCCAAGAAGCATCGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp CATCCTCATCCTCAGAGTCAGCCAAAATCTCCTCAATaGTGTCACCTTTGCTCTGGACAGGCTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: HPHPQSQPKSPQ*CHLCSGQAPLP
Trigger: AGGAAGAGGAGCCTGTCCAGAGCAAAGGTGACAGCATTGAGGAGATTTTGGCTGACTCTGAGGATGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp TGTCCTTCAGCAGTGTTAGCATATGCAGCGTGGTGGTaGCCTCTTTGGAACCTCCAGACTTCTCAATCTCCT +
Preference number: 6 (lower is better)
Translates to: CPSAVLAYAAWW*PLWNLQTSQSP
Trigger: AGGAGATTGAGAAGTCTGGAGGTTCCAAAGAGGCCACCACCACGCTGCATATGCTAACACTGCTGAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp CGGGTCTCAGCTTTCCTGATGTTTATCAGGACTTTGTaGTATTCTGCGGGTAGCAGACCCTTCACCAACTCG +
Preference number: 6 (lower is better)
Translates to: RVSAFLMFIRTL*YSAGSRPFTNS
Trigger: CGAGTTGGTGAAGGGTCTGCTACCCGCAGAATACCACAAAGTCCTGATAAACATCAGGAAAGCTGAGACCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp CTGCTCGCCTGCGCAGACATGATGTCCATGAAGGCTTaGGAGGTATCAGAGAACTTCTTCATGAGCACAGGA +
Preference number: 6 (lower is better)
Translates to: LLACADMMSMKA*EVSENFFMSTG
Trigger: TCCTGTGCTCATGAAGAAGTTCTCTGATACCTCCAAAGCCTTCATGGACATCATGTCTGCGCAGGCGAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp CCCTTCACCAACTCGAATCCAAACTTGCGGGTGAACTaGATGAACAGGTTCCGAAGCTTCATCCGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: PFTNSNPNLRVN*MNRFRSFIRKC
Trigger: GCACTTCCGGATGAAGCTTCGGAACCTGTTCATCAAGTTCACCCGCAAGTTTGGATTCGAGTTGGTGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp GCTCGGGTCTCAGCTTTCCTGATGTTTATCAGGACTTaGTGGTATTCTGCGGGTAGCAGACCCTTCACCAAC +
Preference number: 6 (lower is better)
Translates to: ARVSAFLMFIRT*WYSAGSRPFTN
Trigger: GTTGGTGAAGGGTCTGCTACCCGCAGAATACCACAAAGTCCTGATAAACATCAGGAAAGCTGAGACCCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 72 bp AGGCGGCCCTTCTTCTTTACATCGCCTTTTGCCTTCTaGGCCTTGTATTCAGCTCCAGGTGCAGCCTTCTTA +
Preference number: 6 (lower is better)
Translates to: RRPFFFTSPFAF*ALYSAPGAAFL
Trigger: TAAGAAGGCTGCACCTGGAGCTGAATACAAGGCCAAGAAGGCAAAAGGCGATGTAAAGAAGAAGGGCCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CAA 90 bp TGCTTCTTGGCTCGGGTCTCAGCTTTCCTGATGTTTATCAGGACTTaGTGGTATTCTGCGGGTAGCAGACCCTTCACCAACTCGAATCCA +
Preference number: 6 (lower is better)
Translates to: CFLARVSAFLMFIRT*WYSAGSRPFTNSNP
Trigger: TGGATTCGAGTTGGTGAAGGGTCTGCTACCCGCAGAATACCACAAAGTCCTGATAAACATCAGGAAAGCTGAGACCCGAGCCAAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS TCA 72 bp CTTTTCACCAAACATGAAGTCACTGCCCTTGAGAACTaGGCACACTCCGTGCTGAGCAGCCTTACGGATCTT +
Preference number: 6 (lower is better)
Translates to: LFTKHEVTALEN*AHSVLSSLTDL
Trigger: AAGATCCGTAAGGCTGCTCAGCACGGAGTGTGCTCAGTTCTCAAGGGCAGTGACTTCATGTTTGGTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GGTCAGAGCCAAAATGCTGCAACTAACTGTGGTAACTaGACCCAGAAGGCCAGGATAGATGAGGACAAGGTA +
Preference number: 6 (lower is better)
Translates to: GQSQNAATNCGN*TQKARIDEDKV
Trigger: TACCTTGTCCTCATCTATCCTGGCCTTCTGGGTGCAGTTACCACAGTTAGTTGCAGCATTTTGGCTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp AACTTGATGAACAGGTTCCGAAGCTTCATCCGGAAGTaGCGTCGCATGTCATCTGACAACTTCCCAATGGCT +
Preference number: 6 (lower is better)
Translates to: NLMNRFRSFIRK*RRMSSDNFPMA
Trigger: AGCCATTGGGAAGTTGTCAGATGACATGCGACGGCACTTCCGGATGAAGCTTCGGAACCTGTTCATCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS CCA 72 bp CTGGTCCCCATCAGCCCTTTGAACTCAAACAAGAGGTaGGTCAGAGCCAAAATGCTGCAACTAACTGTGGTA +
Preference number: 6 (lower is better)
Translates to: LVPISPLNSNKR*VRAKMLQLTVV
Trigger: TACCACAGTTAGTTGCAGCATTTTGGCTCTGACCCACCTCTTGTTTGAGTTCAAAGGGCTGATGGGGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5
CDS GCA 72 bp GAGTGTATCATAAATCTTCGACTCCACTGTGCTGCCTaGCTGAGCCAGGTCCATTGCTTTTCTCTTAAGAGT +
Preference number: 6 (lower is better)
Translates to: ECIINLRLHCAA*LSQVHCFSLKS
Trigger: ACTCTTAAGAGAAAAGCAATGGACCTGGCTCAGGCAGGCAGCACAGTGGAGTCGAAGATTTATGATACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038677.5