Pregenerated sensors for RRNAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004896Ensembl transcript IDs: ENSMUST00000005016.16, ENSMUST00000160074.8, ENSMUST00000160143.2, ENSMUST00000160648.8, ENSMUST00000164439.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGCAGGAGGGCCAAGCTGAAGAAGGCCACCACACGATTCTCTTaGGCCTGGTGGGCCTGGAGGGCAGCCAGATCCAAAGGCAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: ASRRAKLKKATTRFS*AWWAWRAARSKGSW Trigger: CCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTGGCCTTCTTCAGCTTGGCCCTCCTGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR CCA 90 bp | AGGGCCAAGCTGAAGAAGGCCACCACACGATTCTCTTGGGCCTGGTaGGCCTGGAGGGCAGCCAGATCCAAAGGCAGCTGGGGGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RAKLKKATTRFSWAW*AWRAARSKGSWGSR Trigger: TCTGGACCCCCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTGGCCTTCTTCAGCTTGGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR TCA 90 bp | AGAGGAAGCAGAAGCTCCTCACACAGAGTTGTGGGGCTGACCCACTaGACCACGTGGTGGGGCCGGTGGCGAGGGCCTCTTTGCACCATC | + |
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Preference number: 1 (lower is better) Translates to: RGSRSSSHRVVGLTH*TTWWGRWRGPLCTI Trigger: GATGGTGCAAAGAGGCCCTCGCCACCGGCCCCACCACGTGGTTCAGTGGGTCAGCCCCACAACTCTGTGTGAGGAGCTTCTGCTTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR TCA 90 bp | GTCTCTCCAGAGGAAGCAGAAGCTCCTCACACAGAGTTGTGGGGCTaGCCCACTGAACCACGTGGTGGGGCCGGTGGCGAGGGCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: VSPEEAEAPHTELWG*PTEPRGGAGGEGLF Trigger: AAAGAGGCCCTCGCCACCGGCCCCACCACGTGGTTCAGTGGGTCAGCCCCACAACTCTGTGTGAGGAGCTTCTGCTTCCTCTGGAGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR CCA 90 bp | AAGCTGAAGAAGGCCACCACACGATTCTCTTGGGCCTGGTGGGCCTaGAGGGCAGCCAGATCCAAAGGCAGCTGGGGGTCCAGACCCACT | + |
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Preference number: 1 (lower is better) Translates to: KLKKATTRFSWAWWA*RAARSKGSWGSRPT Trigger: AGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTGGCCTTCTTCAGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR TCA 90 bp | GCAGCCCAGCTATCCACTGACTCAGTGGGTAGCTGCCAGGGTCACTaGGTTTCATGTAGCAGCAGCCTACCGAGGCCAGGGCCACCACTT | + |
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Preference number: 1 (lower is better) Translates to: AAQLSTDSVGSCQGH*VSCSSSLPRPGPPL Trigger: AAGTGGTGGCCCTGGCCTCGGTAGGCTGCTGCTACATGAAACTCAGTGACCCTGGCAGCTACCCACTGAGTCAGTGGATAGCTGGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR GCA 90 bp | ACGTGGTGGGGCCGGTGGCGAGGGCCTCTTTGCACCATCTTTGGGTaGCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGCTCCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: TWWGRWRGPLCTIFG*LFSILSRAFRSSWS Trigger: AGACCAGGAGCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCCCCACCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR CCA 90 bp | AACCACGTGGTGGGGCCGGTGGCGAGGGCCTCTTTGCACCATCTTTaGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NHVVGPVARASLHHL*VPLLHFVQSLQELL Trigger: CAGGAGCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCCCCACCACGTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR TCA 90 bp | GTAGAATCAATGTCTCTACCAGTGGGGCCAGCAGGAGGGCCAAGCTaGAGAAGGCCACCACACGATTCTCTTGGGCCTGGTGGGCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: VESMSLPVGPAGGPS*RRPPHDSLGPGGPG Trigger: TCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTGGCCTTCTTCAGCTTGGCCCTCCTGCTGGCCCCACTGGTAGAGACATTGATTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR CCA 90 bp | ATGAAGCGGGAGAGGTGGCCCTGGCCTGAGCCCACATCCACAACTTaGGTGCAGCCAGTGAGATCGCTAAGCTTCTTCACCAACTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: MKRERWPWPEPTSTT*VQPVRSLSFFTNSP Trigger: GGGAGAGTTGGTGAAGAAGCTTAGCGATCTCACTGGCTGCACCCAAGTTGTGGATGTGGGCTCAGGCCAGGGCCACCTCTCCCGCTTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR CCA 90 bp | TCTTGGGCCTGGTGGGCCTGGAGGGCAGCCAGATCCAAAGGCAGCTaGGGGTCCAGACCCACTCGCTTTAACCCTTGTTTCACATATCTG | + |
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Preference number: 1 (lower is better) Translates to: SWAWWAWRAARSKGS*GSRPTRFNPCFTYL Trigger: CAGATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR GCA 90 bp | AGGCCTCCGAAGCTCAGGGCAGACTTGTCGGATGACTGTCTCCAGTaGTGCACGGAAGCAGTGTGTTTGCAGGCCAGGCTCTGCTTTATG | + |
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Preference number: 1 (lower is better) Translates to: RPPKLRADLSDDCLQ*CTEAVCLQARLCFM Trigger: CATAAAGCAGAGCCTGGCCTGCAAACACACTGCTTCCGTGCAGCACTGGAGACAGTCATCCGACAAGTCTGCCCTGAGCTTCGGAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR CCA 90 bp | ACAAGCATGAAGGCCTGTGAGCAGCAGACGTGCACTACTCTGGCCTaGTCTCTCCAGAGGAAGCAGAAGCTCCTCACACAGAGTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TSMKACEQQTCTTLA*SLQRKQKLLTQSCG Trigger: CCCACAACTCTGTGTGAGGAGCTTCTGCTTCCTCTGGAGAGACCAGGCCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR CCA 90 bp | TGGCACTGGTGGTTTCAGACTGTCAGTTGTCTTCAGTCTCAAGAGTaGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCA | + |
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Preference number: 1 (lower is better) Translates to: WHWWFQTVSCLQSQE*RRPDPGASWWPPEP Trigger: TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGACTGAAGACAACTGACAGTCTGAAACCACCAGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR GCA 90 bp | AACACTAAGATCCCCACAAGCATGAAGGCCTGTGAGCAGCAGACGTaGACTACTCTGGCCTGGTCTCTCCAGAGGAAGCAGAAGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: NTKIPTSMKACEQQT*TTLAWSLQRKQKLL Trigger: GAGGAGCTTCTGCTTCCTCTGGAGAGACCAGGCCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGGGATCTTAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR TCA 90 bp | CAGCAGAAGTGTCTTAGCAAGGCAACACTAAGATCCCCACAAGCATaGAGGCCTGTGAGCAGCAGACGTGCACTACTCTGGCCTGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: QQKCLSKATLRSPQA*RPVSSRRALLWPGL Trigger: GAGACCAGGCCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGGGATCTTAGTGTTGCCTTGCTAAGACACTTCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR TCA 90 bp | GTTTCAGACTGTCAGTTGTCTTCAGTCTCAAGAGTGGAGAAGGCCTaGCCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: VSDCQLSSVSRVEKA*PRGVLVATRTRFLG Trigger: TCCCAGAAATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGACTGAAGACAACTGACAGTCTGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR GCA 90 bp | AGACCTCACTCTTCAATCTTGAGTTCATGGACCCTGGGGATTCCTTaGACACCAGGCCTCCGAAGCTCAGGGCAGACTTGTCGGATGACT | + |
|
Preference number: 1 (lower is better) Translates to: RPHSSILSSWTLGIP*TPGLRSSGQTCRMT Trigger: AGTCATCCGACAAGTCTGCCCTGAGCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAGTGAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR TCA 90 bp | CTTGGTTGTAGGGCAGTTGAAGAAATAGAGAGTTGGCAAACACTTTaGTTCAACAGATGGCCCCAAGGACACATCAGTGGAAGATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LGCRAVEEIESWQTL*FNRWPQGHISGRCS Trigger: AGAGCATCTTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGCCAACTCTCTATTTCTTCAACTGCCCTACAACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| 3UTR TCA 90 bp | ACACAGTATTACTTTACACAAGAAGAGAAAGAAAGGGTACAAATCTaGAGTTATGGTATCCAGCCATATTGGCACTGGTGGTTTCAGACT | + |
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Preference number: 1 (lower is better) Translates to: TQYYFTQEEKERVQI*SYGIQPYWHWWFQT Trigger: AGTCTGAAACCACCAGTGCCAATATGGCTGGATACCATAACTTCAGATTTGTACCCTTTCTTTCTCTTCTTGTGTAAAGTAATACTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160648.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCCCCAGGCAGGCCACAGTGCCTACTCTGACATTCCTGGCTTGTGTGAGAGAGTGGAGAAGGCCTaGCCCAGGGGCGTCTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QPPQAGHSAYSDIPGLCERVEKA*PRGVLV Trigger: CACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCT...CTCACACAAGCCAGGAATGTCAGAGTAGGCACTGTGGCCTGCCTGGGGAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACAAGCATGAAGGCCTGTGAGCAGCAGACGTGCACTACTCTGGCCTGGTCTCGGGAGAGGTGGCCCTaGCCTGAGCCCACATCCACA | + |
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Preference number: 2 (lower is better) Translates to: PTSMKACEQQTCTTLAWSRERWP*PEPTST Trigger: TGTGGATGTGGGCTCAGGCCAGGGCCACCTCTCCCG...AGACCAGGCCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGCAGAAGCTCCTCACACAGAGTTGTGGGGCTGACCCACTGAACCACGTGCGGGAGAGGTGGCCCTaGCCTGAGCCCACATCCACA | + |
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Preference number: 2 (lower is better) Translates to: RKQKLLTQSCGADPLNHVRERWP*PEPTST Trigger: TGTGGATGTGGGCTCAGGCCAGGGCCACCTCTCCCG...CACGTGGTTCAGTGGGTCAGCCCCACAACTCTGTGTGAGGAGCTTCTGCTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGCCTGGTCTCTCCAGAGGAAGCAGAAGCTCCTCACACAGAGTTGTGGGGATGAAGCGGGAGAGGTaGCCCTGGCCTGAGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LWPGLSRGSRSSSHRVVGMKRER*PWPEPT Trigger: TGTGGGCTCAGGCCAGGGCCACCTCTCCCGCTTCAT...CCCCACAACTCTGTGTGAGGAGCTTCTGCTTCCTCTGGAGAGACCAGGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR CAA 90 bp | GAACCACGTGGTGGGGCCGGTGGCGAGGGCCTCTTTGCACCATCTTaGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: EPRGGAGGEGLFAPS*GASSPFCPEPSGAP Trigger: AGGAGCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCCCCACCACGTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR CAA 90 bp | GCTGACCCACTGAACCACGTGGTGGGGCCGGTGGCGAGGGCCTCTTaGCACCATCTTTGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ADPLNHVVGPVARAS*HHLWVPLLHFVQSL Trigger: AAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCCCCACCACGTGGTTCAGTGGGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR CAA 90 bp | CCTGGGGATTCCTTGCACACCAGGCCTCCGAAGCTCAGGGCAGACTaGTCGGATGACTGTCTCCAGTGCTGCACGGAAGCAGTGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PGDSLHTRPPKLRAD*SDDCLQCCTEAVCL Trigger: CAAACACACTGCTTCCGTGCAGCACTGGAGACAGTCATCCGACAAGTCTGCCCTGAGCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACAAGCATGAAGGCCTGTGAGCAGCAGACGTGCACTACTCTGGCCTGGTCTTGGCGAGGGCCTCTTTaGACCATCTTTGGGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PTSMKACEQQTCTTLAWSWRGPL*TIFGCL Trigger: GAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCA...AGACCAGGCCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGCCAGATCCAAAGGCAGCTGGGGGTCCAGACCCACTCGCTTTAACCCTCTTCAGTCTCAAGAGTaGAGAAGGCCTGACCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RAARSKGSWGSRPTRFNPLQSQE*RRPDPG Trigger: CCCTGGGTCAGGCCTTCTCCACTCTTGAGACTGAAG...AGGGTTAAAGCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGATCCAAAGGCAGCTGGGGGTCCAGACCCACTCGCTTTAACCCTTGTTCTGTGTTGTCCAGACTaGCCTCTGCCTCCCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: QPDPKAAGGPDPLALTLVLCCPD*PLPPRF Trigger: GAACCTGGGAGGCAGAGGTCAGTCTGGACAACACAG...AACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGGTCCAGACCCACTCGCTTTAACCCTTGTTTCACATATCTGTGGGACCGACCCAGGGGCGTCTTaGTGGCCACCAGAACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: AGGPDPLALTLVSHICGTDPGAS*WPPEPD Trigger: ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTC...GGTCCCACAGATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGATAGGTCCTGATGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGTTCTTATGAAGCGGGAGAGGTaGCCCTGGCCTGAGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: PGIGPDVWRWEQEGPSVLMKRER*PWPEPT Trigger: TGTGGGCTCAGGCCAGGGCCACCTCTCCCGCTTCAT...AAGAACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGATAGAGCATCCGGTCCAGTAGAATCAATGTCTCTACCAGTGGGGCCAGCAGAGGTGGCCCTGGCCTaGGCCCACATCCACAACTTG | + |
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Preference number: 2 (lower is better) Translates to: EDRASGPVESMSLPVGPAEVALA*AHIHNL Trigger: CAAGTTGTGGATGTGGGCTCAGGCCAGGGCCACCTC...TGCTGGCCCCACTGGTAGAGACATTGATTCTACTGGACCGGATGCTCTATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCCTCTTTGCACCATCTTTGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTGAGGTGGCCCTGGCCTaGGCCCACATCCACAACTTG | + |
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Preference number: 2 (lower is better) Translates to: RASLHHLWVPLLHFVQSLEVALA*AHIHNL Trigger: CAAGTTGTGGATGTGGGCTCAGGCCAGGGCCACCTC...AAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| 3UTR-3UTR TCA 90 bp | TTATGTGCCCCGACTAAAGACATTAGAAGAAGATGTGATGGAGGCCATGGGGATCCAGCCCCAGAGACATaGAGCGGGAGAGGTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LCAPTKDIRRRCDGGHGDPAPET*SGRGGP Trigger: AGGGCCACCTCTCCCGCTTCATGTCTCTGGGGCTGG...ATCCCCATGGCCTCCATCACATCTTCTTCTAATGTCTTTAGTCGGGGCACATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCACTACTCTGGCCTGGTCTCTCCAGAGGAAGCAGAAGCTCCTCACACAGAGGGAGCTCAGGCACAGTaGAGCTTTTCTTCTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VHYSGLVSPEEAEAPHTEGAQAQ*SFSSCQ Trigger: CTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCC...CTCTGTGTGAGGAGCTTCTGCTTCCTCTGGAGAGACCAGGCCAGAGTAGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCAACACTAAGATCCCCACAAGCATGAAGGCCTGTGAGCAGCAGACGTGCCAAGTGCTTGCATTTTaGGGAGCTCAGGCACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: QGNTKIPTSMKACEQQTCQVLAF*GAQAQC Trigger: GCACTGTGCCTGAGCTCCCCAAAATGCAAGCACTTG...GCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGGGATCTTAGTGTTGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTCCCAGGGATAGGTCCTaGTGTTTGGAGATGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: ELRHSAAFLLVRIDWVGAPRDRS*CLEMGA Trigger: TGCTCCCATCTCCAAACATCAGGACCTATCCCTGGG...AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGGGTCCAGACCCACTCGCTTTAACCCTTGTTTCACATATCTGTGGGACCCTCACTCTTCAATCTTaGGTTCATGGACCCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: AGGPDPLALTLVSHICGTLTLQS*VHGPWG Trigger: TCCCCAGGGTCCATGAACTCAAGATTGAAGAGTGAG...GGTCCCACAGATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGACTTGAGAGCAGCCGTTGTCCACACTACCCCTCTGCCTCTCCCAAGTGCTAAGCTAATAAGTTGCTaGGCTAGGAATGTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RDLRAAVVHTTPLPLPSAKLISC*ARNVGR Trigger: CCTGCCCACATTCCTAGCCCAGCAACTTATTAGCTT...AGCACTTGGGAGAGGCAGAGGGGTAGTGTGGACAACGGCTGCTCTCAAGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGTGTGTTTGCAGGCCAGGCTCTGCTTTATGTAATCTCTCCGCATAGTCCTTCCACACTACCCCTCTaGCTCTCCCAAGTGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SSVFAGQALLYVISPHSPSTLPL*LSQVLA Trigger: TGCAAGCACTTGGGAGAGGCAGAGGGGTAGTGTGGA...AGGACTATGCGGAGAGATTACATAAAGCAGAGCCTGGCCTGCAAACACACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAGATAGAGCATCCGGTCCAGTAGAATCAATGTCTCTACCAGTGGGGCCAAGCCTCCGGATCTCATaGTGCTTCTTGGGCTTGACA | + |
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Preference number: 2 (lower is better) Translates to: PEDRASGPVESMSLPVGPSLRIS*CFLGLT Trigger: TGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCT...TGGCCCCACTGGTAGAGACATTGATTCTACTGGACCGGATGCTCTATCTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAGATAGAGCATCCGGTCCAGTAGAATCAATGTCTCTACCAGTGGGGCCAGACTGTCTCCAGTGCTaGACGGAAGCAGTGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PEDRASGPVESMSLPVGPDCLQC*TEAVCL Trigger: CAAACACACTGCTTCCGTGCAGCACTGGAGACAGTC...TGGCCCCACTGGTAGAGACATTGATTCTACTGGACCGGATGCTCTATCTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGATGGCATTGTCCCTGAAACATGGACTGGTAAGTTGAGGATGGGCAGGAAGCCTGATGTTTGGAGATaGGAGCAAGAAGGCCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ADGIVPETWTGKLRMGRKPDVWR*EQEGPS Trigger: AGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGG...CTTCCTGCCCATCCTCAACTTACCAGTCCATGTTTCAGGGACAATGCCATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGATGGCATTGTCCCTGAAACATGGACTGGTAAGTTGAGGATGGGCAGGAAGCAAGTGCTTGCATTTTaGGGAGCTCAGGCACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: ADGIVPETWTGKLRMGRKQVLAF*GAQAQC Trigger: GCACTGTGCCTGAGCTCCCCAAAATGCAAGCACTTG...CTTCCTGCCCATCCTCAACTTACCAGTCCATGTTTCAGGGACAATGCCATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGAGGCTGCTTCTTGGGCTTaGCATGTTTCCGAAAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SYPPGNPLRSSGDLLRQEAASWA*HVSEKE Trigger: CTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGC...CTCCTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCATCCACACTACCCCTCTaGCTCTCCCAAGTGCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SGDLLRQENVFESLQDLASTLPL*LSQVLA Trigger: TGCAAGCACTTGGGAGAGGCAGAGGGGTAGTGTGGA...TGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGTAAATCTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGAATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAGCTGGGCTAGGAATGTaGGCAGGGCTTGGTTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: GRIIPKPEFPRADGIVPEAGLGM*AGLGCR Trigger: CCTACAACCAAGCCCTGCCCACATTCCTAGCCCAGC...TTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAATTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAGATGACTGTCTCCAGTaGTGCACGGAAGCAGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SGDLLRQENVFESLQDLADDCLQ*CTEAVC Trigger: ACACACTGCTTCCGTGCAGCACTGGAGACAGTCATC...TGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGTAAATCTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTAGCCTTCCCATAGGTCCTGATGTTTaGAGATGGGAGCAAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HSAAFLLVRIDWVGASLPIGPDV*RWEQEG Trigger: GCCTTCTTGCTCCCATCTCCAAACATCAGGACCTAT...GGGAAGGCTAGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR CAA 90 bp | GGAGGCCATGGGGATCCAGGAGACTCGAAGATTCAAGAAAGTTTATaGGTATTGAGCCTCAGAGTGCTGCTTCTGCCTGTCCAGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GGHGDPGDSKIQESL*VLSLRVLLLPVQFS Trigger: TGAAAACTGGACAGGCAGAAGCAGCACTCTGAGGCTCAATACCAATAAACTTTCTTGAATCTTCGAGTCTCCTGGATCCCCATGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTGGAAGATGCTCCTCTTTACCAGCCTCTaGTTCCCTTCAAGGCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ANTLIQQMAPRTHQWKMLLFTSL*FPSRLF Trigger: GAAGAGCCTTGAAGGGAATCAGAGGCTGGTAAAGAG...GAGCATCTTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATGTGCCCCGACTAAAGACATTAGAAGAAGATGTGATGGAGGCCATGGGGATTCTGCCTCTCCCAAGTaGTTGCATTTTGGGGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LCAPTKDIRRRCDGGHGDSASPK*LHFGEL Trigger: GAGCTCCCCAAAATGCAAGCACTTGGGAGAGGCAGA...ATCCCCATGGCCTCCATCACATCTTCTTCTAATGTCTTTAGTCGGGGCACATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGTCAGAGTGCTGCTTCTaGCTGTCCAGTTTTCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQSECCF*LSSFHL Trigger: AAGGTGAAAACTGGACAGGCAGAAGCAGCACTCTGA...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACCCCAGAAGAGGGCATCAGGTCTCATTATAGGTGGTTTTGAGCCACCATATATAGGTCCTGATGTTTaGAGATGGGAGCAAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TPQKRASGLIIGGFEPPYIGPDV*RWEQEG Trigger: GCCTTCTTGCTCCCATCTCCAAACATCAGGACCTAT...ATATGGTGGCTCAAAACCACCTATAATGAGACCTGATGCCCTCTTCTGGGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGGGAGCTCAGGCACAGTaGAGCTTTTCTTCTTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: FYSYPPGNPLRSSGDLLRGAQAQ*SFSSCQ Trigger: CTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTCC...CCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGAAAAGCTAATAAGTTaGTGGGCTAGGAATGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQEKLIS*WARNVG Trigger: GCCCACATTCCTAGCCCAGCAACTTATTAGCTTTTC...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCCTCTTTGCACCATCTTTGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCACAAATCTGAAGTTATaGTATCCAGCCATATTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GPLCTIFGCLFSILSRAFTNLKL*YPAILA Trigger: TGCCAATATGGCTGGATACCATAACTTCAGATTTGT...GAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGACAAATCTGAAGTTATaGTATCCAGCCATATTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQTNLKL*YPAILA Trigger: TGCCAATATGGCTGGATACCATAACTTCAGATTTGT...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR TCA 72 bp | GAGGAAGCAGAAGCTCCTCACACAGAGTTGTGGGGCTaGCCCACTGAACCACGTGGTGGGGCCGGTGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: EEAEAPHTELWG*PTEPRGGAGGE Trigger: CTCGCCACCGGCCCCACCACGTGGTTCAGTGGGTCAGCCCCACAACTCTGTGTGAGGAGCTTCTGCTTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| 3UTR CCA 72 bp | CTGAAGAAGGCCACCACACGATTCTCTTGGGCCTGGTaGGCCTGGAGGGCAGCCAGATCCAAAGGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKKATTRFSWAW*AWRAARSKGSW Trigger: CCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTGGCCTTCTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | TGGTGGGCCTGGAGGGCAGCCAGATCCAAAGGCAGCTaGGGGTCCAGACCCACTCGCTTTAACCCTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WWAWRAARSKGS*GSRPTRFNPCF Trigger: GAAACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | AGGGCCAAGCTGAAGAAGGCCACCACACGATTCTCTTaGGCCTGGTGGGCCTGGAGGGCAGCCAGATCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RAKLKKATTRFS*AWWAWRAARSK Trigger: TTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTGGCCTTCTTCAGCTTGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACGTGGTGGGGCCGGTGGCGAGGGCCTCTTTGCACCATCTTTGGGTGCCTCTTGGTATCCAGCCATATaGGCACTGGTGGTTTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PRGGAGGEGLFAPSLGASWYPAI*ALVVSD Trigger: GTCTGAAACCACCAGTGCCAATATGGCTGGATACCA...AGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCCCCACCACGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR GCA 72 bp | GGCCGGTGGCGAGGGCCTCTTTGCACCATCTTTGGGTaGCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRWRGPLCTIFG*LFSILSRAFRS Trigger: GCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| 3UTR GCA 72 bp | CTCAGGGCAGACTTGTCGGATGACTGTCTCCAGTGCTaGACGGAAGCAGTGTGTTTGCAGGCCAGGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRADLSDDCLQC*TEAVCLQARLC Trigger: GCAGAGCCTGGCCTGCAAACACACTGCTTCCGTGCAGCACTGGAGACAGTCATCCGACAAGTCTGCCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | GAGAGGTGGCCCTGGCCTGAGCCCACATCCACAACTTaGGTGCAGCCAGTGAGATCGCTAAGCTTCTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: ERWPWPEPTSTT*VQPVRSLSFFT Trigger: GGTGAAGAAGCTTAGCGATCTCACTGGCTGCACCCAAGTTGTGGATGTGGGCTCAGGCCAGGGCCACCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| 3UTR TCA 72 bp | CTATCCACTGACTCAGTGGGTAGCTGCCAGGGTCACTaGGTTTCATGTAGCAGCAGCCTACCGAGGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSTDSVGSCQGH*VSCSSSLPRPG Trigger: CCCTGGCCTCGGTAGGCTGCTGCTACATGAAACTCAGTGACCCTGGCAGCTACCCACTGAGTCAGTGGATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR TCA 72 bp | CACCAGGCCTCCGAAGCTCAGGGCAGACTTGTCGGATaGCTGTCTCCAGTGCTGCACGGAAGCAGTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HQASEAQGRLVG*LSPVLHGSSVF Trigger: AAACACACTGCTTCCGTGCAGCACTGGAGACAGTCATCCGACAAGTCTGCCCTGAGCTTCGGAGGCCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR GCA 72 bp | ATCCCCACAAGCATGAAGGCCTGTGAGCAGCAGACGTaGACTACTCTGGCCTGGTCTCTCCAGAGGAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IPTSMKACEQQT*TTLAWSLQRKQ Trigger: CTGCTTCCTCTGGAGAGACCAGGCCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| 3UTR GCA 72 bp | AAGCTCAGGGCAGACTTGTCGGATGACTGTCTCCAGTaGTGCACGGAAGCAGTGTGTTTGCAGGCCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KLRADLSDDCLQ*CTEAVCLQARL Trigger: GAGCCTGGCCTGCAAACACACTGCTTCCGTGCAGCACTGGAGACAGTCATCCGACAAGTCTGCCCTGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR TCA 72 bp | GACTGGGTAGGTGCTAGCCTTCCCAGGGATAGGTCCTaGTGTTTGGAGATGGGAGCAAGAAGGCCCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DWVGASLPRDRS*CLEMGARRPLC Trigger: ACAGAGGGGCCTTCTTGCTCCCATCTCCAAACATCAGGACCTATCCCTGGGAAGGCTAGCACCTACCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR TCA 72 bp | TGTCAGTTGTCTTCAGTCTCAAGAGTGGAGAAGGCCTaGCCCAGGGGCGTCTTGGTGGCCACCAGAACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CQLSSVSRVEKA*PRGVLVATRTR Trigger: TCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGACTGAAGACAACTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTaGTGGCCACCAGAACCAGATTTCTGGGAGAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SQEWRRPDPGAS*WPPEPDFWERV Trigger: AACTCTCTCCCAGAAATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | AGCCTCCCCAGACCTCACTCTTCAATCTTGAGTTCATaGACCCTGGGGATTCCTTGCACACCAGGCCTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: SLPRPHSSILSS*TLGIPCTPGLR Trigger: TCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAGTGAGGTCTGGGGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | TTCATGGCCAGGCAGCCCAGCTATCCACTGACTCAGTaGGTAGCTGCCAGGGTCACTGAGTTTCATGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FMARQPSYPLTQ*VAARVTEFHVA Trigger: TGCTACATGAAACTCAGTGACCCTGGCAGCTACCCACTGAGTCAGTGGATAGCTGGGCTGCCTGGCCATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | TGGTTTCAGACTGTCAGTTGTCTTCAGTCTCAAGAGTaGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WFQTVSCLQSQE*RRPDPGASWWP Trigger: TGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGACTGAAGACAACTGACAGTCTGAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCGGTGGCGAGGGCCTCTTTGCACCATCTTTGGGTGCCTCTTCTCCATTTTGATCTCATGCTGCTTCTaGGGCTTGACATGTTTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: GRWRGPLCTIFGCLFSILISCCF*GLTCFR Trigger: TCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGAT...CAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR GCA 72 bp | TCTTCAATCTTGAGTTCATGGACCCTGGGGATTCCTTaGACACCAGGCCTCCGAAGCTCAGGGCAGACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSILSSWTLGIP*TPGLRSSGQTC Trigger: ACAAGTCTGCCCTGAGCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTAAGATCCCCACAAGCATGAAGGCCTGTGAGCAGCAGACGTGCACTACTCTGTGCCTCTTCTCCATTTaGTCCAGAGCCTTCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TKIPTSMKACEQQTCTTLCLFSI*SRAFRS Trigger: GCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCA...CAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGGGATCTTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| 3UTR TCA 72 bp | TGTCTTAGCAAGGCAACACTAAGATCCCCACAAGCATaGAGGCCTGTGAGCAGCAGACGTGCACTACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLSKATLRSPQA*RPVSSRRALLW Trigger: CCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGGGATCTTAGTGTTGCCTTGCTAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| 3UTR GCA 72 bp | ATGACTGTCTCCAGTGCTGCACGGAAGCAGTGTGTTTaGAGGCCAGGCTCTGCTTTATGTAATCTCTCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: MTVSSAARKQCV*RPGSALCNLSA Trigger: TGCGGAGAGATTACATAAAGCAGAGCCTGGCCTGCAAACACACTGCTTCCGTGCAGCACTGGAGACAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGAATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAGCCTCTCCCAAGTGCTaGCATTTTGGGGAGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRIIPKPEFPRADGIVPEASPKC*HFGELR Trigger: CCTGAGCTCCCCAAAATGCAAGCACTTGGGAGAGGC...TTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAATTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACCCCAGAAGAGGGCATCAGGTCTCATTATAGGTGGTTTTGAGCCACCATATACGGAAGCAGTGTGTTaGCAGGCCAGGCTCTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TPQKRASGLIIGGFEPPYTEAVC*QARLCF Trigger: AAAGCAGAGCCTGGCCTGCAAACACACTGCTTCCGT...ATATGGTGGCTCAAAACCACCTATAATGAGACCTGATGCCCTCTTCTGGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAAGATAGAGCATCCGGTCCAGTAGAATCAATGTCTCTACCAGTGGGGCCACTCTTTGCACCATCTTaGGGTGCCTCTTCTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: PEDRASGPVESMSLPVGPLFAPS*GASSPF Trigger: AAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAG...TGGCCCCACTGGTAGAGACATTGATTCTACTGGACCGGATGCTCTATCTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR GCA 72 bp | GAGATAGAGAATCTCTGTGTTGTCCAGACTGACCTCTaGCTCCCAGGTTCTGGGGTTAAAGACATAAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: EIENLCVVQTDL*LPGSGVKDISD Trigger: GTCACTTATGTCTTTAACCCCAGAACCTGGGAGGCAGAGGTCAGTCTGGACAACACAGAGATTCTCTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | TTATTCTTACCCACCAGGAAACCCACTGAGATCCAGTaGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LFLPTRKPTEIQ*RFTEAGERVRV Trigger: GACTCGAACACGTTCTCCTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAACATGGTGGTATCCAGCCATATaGGCACTGGTGGTTTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IIPKPEFPRADGIVPETWWYPAI*ALVVSD Trigger: GTCTGAAACCACCAGTGCCAATATGGCTGGATACCA...CCATGTTTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | ACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTaGAAGATGCTCTTGAAAGAACTTATGTGCCCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: TLIQQMAPRTHQ*KMLLKELMCPD Trigger: GTCGGGGCACATAAGTTCTTTCAAGAGCATCTTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR CCA 72 bp | GCCCAGTCTGCCCTCAAAATAAAATGCCCATTCCTCTaGTACACACTTTCTTTGGCTAGGGTAGTAAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AQSALKIKCPFL*YTLSLARVVSG Trigger: TCCACTTACTACCCTAGCCAAAGAAAGTGTGTACCAGAGGAATGGGCATTTTATTTTGAGGGCAGACTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR TCA 72 bp | AGATGGCCCCAAGGACACATCAGTGGAAGATGCTCTTaGAAGAACTTATGTGCCCCGACTAAAGACATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RWPQGHISGRCS*KNLCAPTKDIR Trigger: TCTAATGTCTTTAGTCGGGGCACATAAGTTCTTTCAAGAGCATCTTCCACTGATGTGTCCTTGGGGCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR TCA 72 bp | AGGGCAGTTGAAGAAATAGAGAGTTGGCAAACACTTTaGTTCAACAGATGGCCCCAAGGACACATCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RAVEEIESWQTL*FNRWPQGHISG Trigger: TCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGCCAACTCTCTATTTCTTCAACTGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAGAATTATCCCCATTCAAGAAAGTTTATaGGTATTGAGCCTCAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TEAGERVRVSTRSGRIIPIQESL*VLSLRV Trigger: CACTCTGAGGCTCAATACCAATAAACTTTCTTGAAT...GGGGATAATTCTGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR TCA 72 bp | CAGGAGACTCGAAGATTCAAGAAAGTTTATTGGTATTaGGCCTCAGAGTGCTGCTTCTGCCTGTCCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QETRRFKKVYWY*ASECCFCLSSF Trigger: AAAACTGGACAGGCAGAAGCAGCACTCTGAGGCTCAATACCAATAAACTTTCTTGAATCTTCGAGTCTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| 3UTR GCA 72 bp | ATTACTTATGTAGCCCAGTCTGCCCTCAAAATAAAATaGCCATTCCTCTGGTACACACTTTCTTTGGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ITYVAQSALKIK*PFLWYTLSLAR Trigger: CCTAGCCAAAGAAAGTGTGTACCAGAGGAATGGGCATTTTATTTTGAGGGCAGACTGGGCTACATAAGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGGAAGATGCTCTTGAAAGAACTTATGTGCCCCGACTAAAGACATTAGAAGAAAGTTTATTGGTATaGAGCCTCAGAGTGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVEDALERTYVPRLKTLEESLLV*SLRVLL Trigger: AAGCAGCACTCTGAGGCTCAATACCAATAAACTTTC...TTCTAATGTCTTTAGTCGGGGCACATAAGTTCTTTCAAGAGCATCTTCCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCACGGGAGAGGTGGCCCTaGCCTGAGCCCACATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPRERWP*PEPTST Trigger: TGTGGATGTGGGCTCAGGCCAGGGCCACCTCTCCCG...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCACGATTCTCTTGGGCCTaGTGGGCCTGGAGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPRFSWA*WAWRAA Trigger: GGCTGCCCTCCAGGCCCACCAGGCCCAAGAGAATCG...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGAGGTGGCCCTGGCCTaGGCCCACATCCACAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPEVALA*AHIHNL Trigger: CAAGTTGTGGATGTGGGCTCAGGCCAGGGCCACCTC...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTCCAGCCCCAGAGACATaGAGCGGGAGAGGTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSGEGLTQGRLGGHQNQIPAPET*SGRGGP Trigger: AGGGCCACCTCTCCCGCTTCATGTCTCTGGGGCTGG...AATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATCGAGGGCACAAGCTGTaGACTTCAGGGCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QEWRRPDPGASWWPPEPDRGHKL*TSGPAG Trigger: CCCTGCTGGCCCTGAAGTCCACAGCTTGTGCCCTCG...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATGCAGGAGGGCCAAGCTaGAGAAGGCCACCACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: QEWRRPDPGASWWPPEPDAGGPS*RRPPHD Trigger: ATCGTGTGGTGGCCTTCTTCAGCTTGGCCCTCCTGC...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATGCTTCTTGCCATGAGTaGGGGAGTGTGCCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEWRRPDPGASWWPPEPDASCHE*GSVPHR Trigger: CCTGTGGGGCACACTCCCCCACTCATGGCAAGAAGC...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGGTGGCCAGCTGTGGTaGGTTCAGTCCATCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPGGQLW*VQSIQC Trigger: GCACTGGATGGACTGAACCCACCACAGCTGGCCACC...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGGCCAGCAGGGTGAGTaGCCACACAGACCTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPGQQGE*PHRPVP Trigger: AGGTACAGGTCTGTGTGGCCACTCACCCTGCTGGCC...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CCA 90 bp | CCCACAAGCATGAAGGCCTGTGAGCAGCAGACGTGCACTACTCTGGCCTGGTCTCGAGGGCACAAGCTGTaGACTTCAGGGCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSMKACEQQTCTTLAWSRGHKL*TSGPAG Trigger: CCCTGCTGGCCCTGAAGTCCACAGCTTGTGCCCTCG...AGACCAGGCCAGAGTAGTGCACGTCTGCTGCTCACAGGCCTTCATGCTTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164439.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGTCGGGAGCTCTGGCTaGGGTTCTCCAGGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPVGSSG*GSPGTL Trigger: CAGAGTTCCTGGAGAACCCCAGCCAGAGCTCCCGAC...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTATGAAGCGGGAGAGGTaGCCCTGGCCTGAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KSGEGLTQGRLGGHQNQIMKRER*PWPEPT Trigger: TGTGGGCTCAGGCCAGGGCCACCTCTCCCGCTTCAT...AATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATAGATCCAAAGGCAGCTaGGGGTCCAGACCCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QEWRRPDPGASWWPPEPDRSKGS*GSRPTR Trigger: GCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCT...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAGCGGGAGAGGTGGCCCTGGCCTGAGCCCACATCCACAACTTGGGTGCAGGTTCTCCAGGAACTCTaGTGGGGTGTGAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MKRERWPWPEPTSTTWVQVLQEL*WGVKAR Trigger: CCTGGCTTTCACACCCCATCAGAGTTCCTGGAGAAC...CTGCACCCAAGTTGTGGATGTGGGCTCAGGCCAGGGCCACCTCTCCCGCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCTGAAACATGGACTGGTAAGTTGAGGATGGGCAGGAAGAGCGTAGGGCTGCCAGCCCCAGAGACATaGAGCGGGAGAGGTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPETWTGKLRMGRKSVGLPAPET*SGRGGP Trigger: AGGGCCACCTCTCCCGCTTCATGTCTCTGGGGCTGG...CAGCCCTACGCTCTTCCTGCCCATCCTCAACTTACCAGTCCATGTTTCAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTCAGGGTGGCCAGCTGTaGTGGGTTCAGTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSGEGLTQGRLGGHQNQIQGGQL*WVQSIQ Trigger: CTGGATGGACTGAACCCACCACAGCTGGCCACCCTG...AATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTCCAGAGGAAGCAGAAGCTCCTCACACAGAGTTGTGGGGCTGACCCACGGCCAGCAGGGTGAGTaGCCACACAGACCTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: GLSRGSRSSSHRVVGLTHGQQGE*PHRPVP Trigger: AGGTACAGGTCTGTGTGGCCACTCACCCTGCTGGCC...GTGGGTCAGCCCCACAACTCTGTGTGAGGAGCTTCTGCTTCCTCTGGAGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164439.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATGTTAGTCGGGAGCTCTaGCTGGGGTTCTCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QEWRRPDPGASWWPPEPDVSREL*LGFSRN Trigger: GTTCCTGGAGAACCCCAGCCAGAGCTCCCGACTAAC...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCACAATGTCTCTACCAGTaGGGCCAGCAGGAGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPQCLYQ*GQQEGQ Trigger: TTGGCCCTCCTGCTGGCCCCACTGGTAGAGACATTG...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| 3UTR CAA 72 bp | GGTGGGGCCGGTGGCGAGGGCCTCTTTGCACCATCTTaGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGAGGEGLFAPS*GASSPFCPEPS Trigger: TGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCGGCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| 3UTR CAA 72 bp | TCCTTGCACACCAGGCCTCCGAAGCTCAGGGCAGACTaGTCGGATGACTGTCTCCAGTGCTGCACGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLHTRPPKLRAD*SDDCLQCCTEA Trigger: TGCTTCCGTGCAGCACTGGAGACAGTCATCCGACAAGTCTGCCCTGAGCTTCGGAGGCCTGGTGTGCAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| CDS-3UTR TCA 90 bp | AGACTTGAGAGCAGCCGTTGTCCACACTACCCCTCTGCCTCTCCCAAGTGCTTGGCAGGAGGGCCAAGCTaGAGAAGGCCACCACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLESSRCPHYPSASPKCLAGGPS*RRPPHD Trigger: ATCGTGTGGTGGCCTTCTTCAGCTTGGCCCTCCTGC...CAAGCACTTGGGAGAGGCAGAGGGGTAGTGTGGACAACGGCTGCTCTCAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR GCA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTGCCTTCTCTCCTCATaGGAGAGGCCATGGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEWRRPDPGASWWPPEPDCLLSS*ERPWAE Trigger: TTCAGCCCATGGCCTCTCGCATGAGGAGAGAAGGCA...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCATGCCTTCTCTCCTCATaGGAGAGGCCATGGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPCLLSS*ERPWAE Trigger: TTCAGCCCATGGCCTCTCGCATGAGGAGAGAAGGCA...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAAGGTCCACAGCCAGTTaGCTTCTCTCCTCATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPRSTAS*LLSSCE Trigger: CTCGCATGAGGAGAGAAGGCAACTGGCTGTGGACCT...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATCCATCCAGTGCTTCTTaGCATGAGTGGGGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEWRRPDPGASWWPPEPDPSSAS*HEWGSV Trigger: CACACTCCCCCACTCATGGCAAGAAGCACTGGATGG...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | AGACTTGAGAGCAGCCGTTGTCCACACTACCCCTCTGCCTCTCCCAAGTGCTTGCAGGGTGGCCAGCTGTaGTGGGTTCAGTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLESSRCPHYPSASPKCLQGGQL*WVQSIQ Trigger: CTGGATGGACTGAACCCACCACAGCTGGCCACCCTG...CAAGCACTTGGGAGAGGCAGAGGGGTAGTGTGGACAACGGCTGCTCTCAAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCGAGGGCCTCTTTGCACCATCTTTGGGTGCCTCTTCTCCATTTTGTCCCAGGGTGGCCAGCTGTaGTGGGTTCAGTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWRGPLCTIFGCLFSILSQGGQL*WVQSIQ Trigger: CTGGATGGACTGAACCCACCACAGCTGGCCACCCTG...GGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTGTTCTCCAGGAACTCTaGTGGGGTGTGAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSGEGLTQGRLGGHQNQIVLQEL*WGVKAR Trigger: CCTGGCTTTCACACCCCATCAGAGTTCCTGGAGAAC...AATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160143.2 ENSMUST00000160648.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAAGCCTCCGGATCTCATaGTGCTTCTTGGGCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPSLRIS*CFLGLT Trigger: TGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCT...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCAGAAGCTCCTCACACAGAGTTGTGGGGCTGACCCACTGAACCACGTGGTTAGTCGGGAGCTCTaGCTGGGGTTCTCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKQKLLTQSCGADPLNHVVSREL*LGFSRN Trigger: GTTCCTGGAGAACCCCAGCCAGAGCTCCCGACTAAC...CACGTGGTTCAGTGGGTCAGCCCCACAACTCTGTGTGAGGAGCTTCTGCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164439.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGATCCAAAGGCAGCTGGGGGTCCAGACCCACTCGCTTTAACCCTTGTTCGAGGGCACAAGCTGTaGACTCATTTCCTCCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPDPKAAGGPDPLALTLVRGHKL*THFLPV Trigger: GACGGGGAGGAAATGAGTCCACAGCTTGTGCCCTCG...AACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCACTCTTTACCAGCCTCTaGTTCCCTTCAAGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQEWRRPDPGASWWPPEPLFTSL*FPSRLF Trigger: GAAGAGCCTTGAAGGGAATCAGAGGCTGGTAAAGAG...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR GCA 90 bp | AGACTTGAGAGCAGCCGTTGTCCACACTACCCCTCTGCCTCTCCCAAGTGCTTGTGCCTTCTCTCCTCATaGGAGAGGCCATGGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLESSRCPHYPSASPKCLCLLSS*ERPWAE Trigger: TTCAGCCCATGGCCTCTCGCATGAGGAGAGAAGGCA...CAAGCACTTGGGAGAGGCAGAGGGGTAGTGTGGACAACGGCTGCTCTCAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTTTGCACCATCTTTGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCGTCGGGAGCTCTGGCTaGGGTTCTCCAGGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLCTIFGCLFSILSRAFVGSSG*GSPGTL Trigger: CAGAGTTCCTGGAGAACCCCAGCCAGAGCTCCCGAC...GAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGATAGAGCATCCGGTCCAGTAGAATCAATGTCTCTACCAGTGGGGCCAGCTTCTTGCCATGAGTaGGGGAGTGTGCCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEDRASGPVESMSLPVGPASCHE*GSVPHR Trigger: CCTGTGGGGCACACTCCCCCACTCATGGCAAGAAGC...TGGCCCCACTGGTAGAGACATTGATTCTACTGGACCGGATGCTCTATCTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTCTTTGCACCATCTTTGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCAGGGTGGCCAGCTGTaGTGGGTTCAGTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RASLHHLWVPLLHFVQSLQGGQL*WVQSIQ Trigger: CTGGATGGACTGAACCCACCACAGCTGGCCACCCTG...AAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTGGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGCTCCTGGTCTGTCGGGAGCTCTGGCTaGGGTTCTCCAGGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFGCLFSILSRAFRSSWSVGSSG*GSPGTL Trigger: CAGAGTTCCTGGAGAACCCCAGCCAGAGCTCCCGAC...AGACCAGGAGCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160648.8 ENSMUST00000164439.2 |
||
| CDS-3UTR CCA 90 bp | GCAGATGGCATTGTCCCTGAAACATGGACTGGTAAGTTGAGGATGGGCAGGAAGAGATCCAAAGGCAGCTaGGGGTCCAGACCCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ADGIVPETWTGKLRMGRKRSKGS*GSRPTR Trigger: GCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCT...CTTCCTGCCCATCCTCAACTTACCAGTCCATGTTTCAGGGACAATGCCATCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCACGATTCTCTTGGGCCTaGTGGGCCTGGAGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGDLLRQENVFESLQDLARFSWA*WAWRAA Trigger: GGCTGCCCTCCAGGCCCACCAGGCCCAAGAGAATCG...TGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGTAAATCTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| 3UTR CAA 72 bp | CTCTTCAATCTTGAGTTCATGGACCCTGGGGATTCCTaGCACACCAGGCCTCCGAAGCTCAGGGCAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFNLEFMDPGDS*HTRPPKLRADL Trigger: CAAGTCTGCCCTGAGCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| CDS-3UTR TCA 90 bp | GCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTGGAAGATGCTCAGAGTGGAGAAGGCCTaGCCCAGGGGCGTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ANTLIQQMAPRTHQWKMLRVEKA*PRGVLV Trigger: CACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCT...GAGCATCTTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAGAATTATCCCCGGCCAGCAGGGTGAGTaGCCACACAGACCTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEAGERVRVSTRSGRIIPGQQGE*PHRPVP Trigger: AGGTACAGGTCTGTGTGGCCACTCACCCTGCTGGCC...GGGGATAATTCTGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR CCA 90 bp | TCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGAGGTTAGTCGGGAGCTCTaGCTGGGGTTCTCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SYPPGNPLRSSGDLLRQEVSREL*LGFSRN Trigger: GTTCCTGGAGAACCCCAGCCAGAGCTCCCGACTAAC...CTCCTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGGCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTGGAAGAGGTGGCCCTGGCCTaGGCCCACATCCACAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGKHFDSTDGPKDTSVEEVALA*AHIHNL Trigger: CAAGTTGTGGATGTGGGCTCAGGCCAGGGCCACCTC...TTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGCCAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR GCA 90 bp | GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTCCATCCAGTGCTTCTTaGCATGAGTGGGGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELRHSAAFLLVRIDWVGAPSSAS*HEWGSV Trigger: CACACTCCCCCACTCATGGCAAGAAGCACTGGATGG...AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
||
| CDS-3UTR GCA 90 bp | GCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTGGAAGATGCTCACCCTGGGGATTCCTTaGACACCAGGCCTCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ANTLIQQMAPRTHQWKMLTLGIP*TPGLRS Trigger: GCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGT...GAGCATCTTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CCA 90 bp | GCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTGGAAGATGCTCGGTGGCCAGCTGTGGTaGGTTCAGTCCATCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANTLIQQMAPRTHQWKMLGGQLW*VQSIQC Trigger: GCACTGGATGGACTGAACCCACCACAGCTGGCCACC...GAGCATCTTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| CDS-3UTR CCA 90 bp | AGAGTTGGCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTGGAAATGAAGCGGGAGAGGTaGCCCTGGCCTGAGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RVGKHFDSTDGPKDTSVEMKRER*PWPEPT Trigger: TGTGGGCTCAGGCCAGGGCCACCTCTCCCGCTTCAT...TTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGCCAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGACCCAGGGGCGTCTTaGTGGCCACCAGAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQDPGAS*WPPEPD Trigger: ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTC...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGGCACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTCTTCAGTCTCAAGAGTaGAGAAGGCCTGACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELRHSAAFLLVRIDWVGALQSQE*RRPDPG Trigger: CCCTGGGTCAGGCCTTCTCCACTCTTGAGACTGAAG...AGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTGCCTGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAGAATTATCCCCGTTCTCCAGGAACTCTaGTGGGGTGTGAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEAGERVRVSTRSGRIIPVLQEL*WGVKAR Trigger: CCTGGCTTTCACACCCCATCAGAGTTCCTGGAGAAC...GGGGATAATTCTGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| CDS-3UTR GCA 90 bp | GTCCCTGAAACATGGACTGGTAAGTTGAGGATGGGCAGGAAGAGCGTAGGGCTGTGCACCATCTTTGGGTaGCTCTTCTCCATTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPETWTGKLRMGRKSVGLCTIFG*LFSILS Trigger: GGACAAAATGGAGAAGAGGCACCCAAAGATGGTGCA...CAGCCCTACGCTCTTCCTGCCCATCCTCAACTTACCAGTCCATGTTTCAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR GCA 90 bp | GGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAGAATGGCGAGGGCCTCTTTaGACCATCTTTGGGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDLLRQENVFESLQDLAEWRGPL*TIFGCL Trigger: GAGGCACCCAAAGATGGTGCAAAGAGGCCCTCGCCA...TTCTGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGTAAATCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR GCA 90 bp | GATGGCATTGTCCCTGAAACATGGACTGGTAAGTTGAGGATGGGCAGGAAGAGCGATGACTGTCTCCAGTaGTGCACGGAAGCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGIVPETWTGKLRMGRKSDDCLQ*CTEAVC Trigger: ACACACTGCTTCCGTGCAGCACTGGAGACAGTCATC...GCTCTTCCTGCCCATCCTCAACTTACCAGTCCATGTTTCAGGGACAATGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR CCA 90 bp | AATAGAGAGTTGGCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGCGAGGGCACAAGCTGTaGACTTCAGGGCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRELANTLIQQMAPRTHQRGHKL*TSGPAG Trigger: CCCTGCTGGCCCTGAAGTCCACAGCTTGTGCCCTCG...CTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGCCAACTCTCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR TCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGAGCTGCCAGGGTCACTaGGTTTCATGTAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQSCQGH*VSCSSS Trigger: GCTGCTGCTACATGAAACTCAGTGACCCTGGCAGCT...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGATTTACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAAGGTCCACAGCCAGTTaGCTTCTCTCCTCATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGDLLRQENVFESLQDLARSTAS*LLSSCE Trigger: CTCGCATGAGGAGAGAAGGCAACTGGCTGTGGACCT...TGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGTAAATCTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| CDS-3UTR GCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGCCATCCAGTGCTTCTTaGCATGAGTGGGGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQPSSAS*HEWGSV Trigger: CACACTCCCCCACTCATGGCAAGAAGCACTGGATGG...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| CDS-3UTR CCA 90 bp | AATAGAGAGTTGGCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGGTCGGGAGCTCTGGCTaGGGTTCTCCAGGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRELANTLIQQMAPRTHQVGSSG*GSPGTL Trigger: CAGAGTTCCTGGAGAACCCCAGCCAGAGCTCCCGAC...CTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGCCAACTCTCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| CDS-3UTR CCA 90 bp | TCAGTGGAAGATGCTCTTGAAAGAACTTATGTGCCCCGACTAAAGACATTAGAACGGGAGAGGTGGCCCTaGCCTGAGCCCACATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVEDALERTYVPRLKTLERERWP*PEPTST Trigger: TGTGGATGTGGGCTCAGGCCAGGGCCACCTCTCCCG...TTCTAATGTCTTTAGTCGGGGCACATAAGTTCTTTCAAGAGCATCTTCCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR TCA 90 bp | GGCAGAATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAGTTCTCCAGGAACTCTaGTGGGGTGTGAAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRIIPKPEFPRADGIVPEVLQEL*WGVKAR Trigger: CCTGGCTTTCACACCCCATCAGAGTTCCTGGAGAAC...TTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAATTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGGCAGGAGAACGTGTTCGAGTCTCTACAAGATCTGGCAGAATTATCCCCCTCTTTACCAGCCTCTaGTTCCCTTCAAGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEAGERVRVSTRSGRIIPLFTSL*FPSRLF Trigger: GAAGAGCCTTGAAGGGAATCAGAGGCTGGTAAAGAG...GGGGATAATTCTGCCAGATCTTGTAGAGACTCGAACACGTTCTCCTGCCTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR TCA 90 bp | ATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAACATGGGGCAGACTTGTCGGATaGCTGTCTCCAGTGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIPKPEFPRADGIVPETWGRLVG*LSPVLH Trigger: GTGCAGCACTGGAGACAGTCATCCGACAAGTCTGCC...CCATGTTTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR GCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGAGCCTCCGGATCTCATaGTGCTTCTTGGGCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQSLRIS*CFLGLT Trigger: TGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCT...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR GCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGCGGAAGCAGTGTGTTTaGAGGCCAGGCTCTGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQRKQCV*RPGSAL Trigger: TAAAGCAGAGCCTGGCCTGCAAACACACTGCTTCCG...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR GCA 90 bp | TATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGACTGTCTCCAGTGCTaGACGGAAGCAGTGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSYPPGNPLRSSGDLLRQDCLQC*TEAVCL Trigger: CAAACACACTGCTTCCGTGCAGCACTGGAGACAGTC...CTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CCA 90 bp | CACAGTGCAGCTTTTCTTCTTGTCAGGATAGACTGGGTAGGTGCTAGCCTTCCCTCAATCTTGAGTTCATaGACCCTGGGGATTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSAAFLLVRIDWVGASLPSILSS*TLGIPC Trigger: GCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGA...GGGAAGGCTAGCACCTACCCAGTCTATCCTGACAAGAAGAAAAGCTGCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CCA 90 bp | ATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAACATGGCAATGTCTCTACCAGTaGGGCCAGCAGGAGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IIPKPEFPRADGIVPETWQCLYQ*GQQEGQ Trigger: TTGGCCCTCCTGCTGGCCCCACTGGTAGAGACATTG...CCATGTTTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CCA 90 bp | TCAGTGGAAGATGCTCTTGAAAGAACTTATGTGCCCCGACTAAAGACATTAGAAGCTTCTTGCCATGAGTaGGGGAGTGTGCCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVEDALERTYVPRLKTLEASCHE*GSVPHR Trigger: CCTGTGGGGCACACTCCCCCACTCATGGCAAGAAGC...TTCTAATGTCTTTAGTCGGGGCACATAAGTTCTTTCAAGAGCATCTTCCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160648.8 |
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| CDS-3UTR CCA 90 bp | AGATGTGATGGAGGCCATGGGGATCCAGGAGACTCGAAGATTCAAGAAAGTTTATATCCACTGACTCAGTaGGTAGCTGCCAGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RCDGGHGDPGDSKIQESLYPLTQ*VAARVT Trigger: AGTGACCCTGGCAGCTACCCACTGAGTCAGTGGATA...TAAACTTTCTTGAATCTTCGAGTCTCCTGGATCCCCATGGCCTCCATCACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR TCA 90 bp | TTTTATTCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGGCTGCTTCTTGGGCTTaGCATGTTTCCGAAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FYSYPPGNPLRSSGDLLRAASWA*HVSEKE Trigger: CTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGC...CCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR TCA 90 bp | ATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAACATGGCATATTCTTCAATCTTaGGTTCATGGACCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIPKPEFPRADGIVPETWHILQS*VHGPWG Trigger: TCCCCAGGGTCCATGAACTCAAGATTGAAGAATATG...CCATGTTTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| 3UTR CAA 72 bp | AAGGGTACAAATCTGAAGTTATGGTATCCAGCCATATaGGCACTGGTGGTTTCAGACTGTCAGTTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGTNLKLWYPAI*ALVVSDCQLSS Trigger: TGAAGACAACTGACAGTCTGAAACCACCAGTGCCAATATGGCTGGATACCATAACTTCAGATTTGTACCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| CDS CCA 90 bp | GTGGACTCATTTCCTCCCCGTCCCTCGGCATCCCCAGCAGCAGGGTaGCCAGCTGTGGTGGGTTCAGTCCATCCAGTGCTTCTTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VDSFPPRPSASPAAG*PAVVGSVHPVLLAM Trigger: CATGGCAAGAAGCACTGGATGGACTGAACCCACCACAGCTGGCCACCCTGCTGCTGGGGATGCCGAGGGACGGGGAGGAAATGAGTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160648.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCACACCACACGATTCTCTaGGGCCTGGTGGGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQEWRRPDPGASWWPPEPHHTIL*GLVGLE Trigger: CTCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTG...TGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS TCA 90 bp | AGTCGGGAGCTCTGGCTGGGGTTCTCCAGGAACTCTGATGGGGTGTaGAAGCCAGGTGTCCGGGTAAAGGCGAGGGCACAAGCTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRELWLGFSRNSDGV*KPGVRVKARAQAVD Trigger: GTCCACAGCTTGTGCCCTCGCCTTTACCCGGACACCTGGCTTTCACACCCCATCAGAGTTCCTGGAGAACCCCAGCCAGAGCTCCCGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| CDS CCA 90 bp | TGTACCTCATTTCCTCCCCGTCCCTCGGCATCCCCAGCAGCAGGGTaGCCAGCTGTGGTGGGTTCAGTCCATCCAGTGCTTCTTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CTSFPPRPSASPAAG*PAVVGSVHPVLLAM Trigger: CATGGCAAGAAGCACTGGATGGACTGAACCCACCACAGCTGGCCACCCTGCTGCTGGGGATGCCGAGGGACGGGGAGGAAATGAGGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160143.2 |
||
| CDS CCA 90 bp | AAAGGCGAGGGCACAAGCTGTGGACTTCAGGGCCAGCAGGGTGAGTaGCCACACAGACCTGTACCTCATTTCCTCCCCGTCCCTCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KGEGTSCGLQGQQGE*PHRPVPHFLPVPRH Trigger: ATGCCGAGGGACGGGGAGGAAATGAGGTACAGGTCTGTGTGGCCACTCACCCTGCTGGCCCTGAAGTCCACAGCTTGTGCCCTCGCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160143.2 ENSMUST00000164439.2 |
||
| CDS CCA 90 bp | TCTTGGGCCTGGTGGGCCTGGAGGGCAGCCAGATCCAAAGGCAGCTaGGGGTCCAGACCCACTCGCTTTAACCCTTGTTTCACATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWAWWAWRAARSKGS*GSRPTRFNPCFTYS Trigger: AGAATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 |
||
| CDS CCA 90 bp | TCTTGGGCCTGGTGGGCCTGGAGGGCAGCCAGATCCAAAGGCAGCTaGGGGTCCAGACCCACTCGCTTTAACCCTTGTTTCACATATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SWAWWAWRAARSKGS*GSRPTRFNPCFTYL Trigger: AAGATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCAGCTGCCTTTGGATCTGGCTGCCCTCCAGGCCCACCAGGCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTTGCCTCTTCTCCATTTaGTCCAGAGCCTTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSGEGLTQGRLGGHQNQICLFSI*SRAFRS Trigger: GCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCA...AATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTATCTCATGCTGCTTCTaGGGCTTGACATGTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KSGEGLTQGRLGGHQNQIISCCF*GLTCFR Trigger: TCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGAT...AATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACACTTTGATTCAACAGATGGCCCCAAGGACACATCAGTGGAAGATGCTCCACCACACGATTCTCTaGGGCCTGGTGGGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ANTLIQQMAPRTHQWKMLHHTIL*GLVGLE Trigger: CTCCAGGCCCACCAGGCCCAAGAGAATCGTGTGGTG...GAGCATCTTCCACTGATGTGTCCTTGGGGCCATCTGTTGAATCAAAGTGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS-3UTR CAA 90 bp | TCTTACCCACCAGGAAACCCACTGAGATCCAGTGGAGATTTACTGAGGCAGGAGACGGAAGCAGTGTGTTaGCAGGCCAGGCTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SYPPGNPLRSSGDLLRQETEAVC*QARLCF Trigger: AAAGCAGAGCCTGGCCTGCAAACACACTGCTTCCGT...CTCCTGCCTCAGTAAATCTCCACTGGATCTCAGTGGGTTTCCTGGTGGGTAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
||
| CDS GCA 90 bp | TCGCTAAGCTTCTTCACCAACTCTCCCAGCCTCCGGATCTCATGCTaGTTCTTGGGCTTGACATGTTTCCGAAAAGGAGCTGTTAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSFFTNSPSLRISC*FLGLTCFRKGAVSR Trigger: CCGACTAACAGCTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCTGGGAGAGTTGGTGAAGAAGCTTAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 |
||
| CDS CCA 90 bp | TGGGGGTCCAGACCCACTCGCTTTAACCCTTGTTTCACATATCTTTaGGTGCCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: WGSRPTRFNPCFTYL*VPLLHFVQSLQELL Trigger: CAGGAGCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGACCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
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| CDS-3UTR CAA 90 bp | GATGGCATTGTCCCTGAAACATGGACTGGTAAGTTGAGGATGGGCAGGAAGAGCTGCCTCTTCTCCATTTaGTCCAGAGCCTTCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: DGIVPETWTGKLRMGRKSCLFSI*SRAFRS Trigger: GCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCA...GCTCTTCCTGCCCATCCTCAACTTACCAGTCCATGTTTCAGGGACAATGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CAA 90 bp | CAAGAGTGGAGAAGGCCTGACCCAGGGGCGTCTTGGTGGCCACCAGAACCAGATTTGTTTCACATATCTTaGGGTGCCTCTTCTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: QEWRRPDPGASWWPPEPDLFHIS*GASSPF Trigger: AAATGGAGAAGAGGCACCCAAAGATATGTGAAACAA...ATCTGGTTCTGGTGGCCACCAAGACGCCCCTGGGTCAGGCCTTCTCCACTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
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| CDS GCA 90 bp | TTCACATATTCTTCAATCTTGAGTTCATGGACCCTGGGGATTCCTTaGACACCAGGCCTCCGAAGCTCAGGGCAGACTTGTCGGATGACT | + |
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Preference number: 5 (lower is better) Translates to: FTYSSILSSWTLGIP*TPGLRSSGQTCRMT Trigger: AGTCATCCGACAAGTCTGCCCTGAGCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAATATGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 |
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| CDS GCA 90 bp | GGTCCAGACCCACTCGCTTTAACCCTTGTTTCACATATCTTTGGGTaGCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGCTCCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GPDPLALTLVSHIFG*LFSILSRAFRSSWS Trigger: AGACCAGGAGCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
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| CDS TCA 90 bp | CCAGACCCACTCGCTTTAACCCTTGTTTCACATATTCTTCAATCTTaGGTTCATGGACCCTGGGGATTCCTTGCACACCAGGCCTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: PDPLALTLVSHILQS*VHGPWGFLAHQASE Trigger: TTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 |
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| CDS GCA 90 bp | AGATCGCTAAGCTTCTTCACCAACTCTCCCAGCCTCCGGATCTCATaGTGCTTCTTGGGCTTGACATGTTTCCGAAAAGGAGCTGTTAGT | + |
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Preference number: 5 (lower is better) Translates to: RSLSFFTNSPSLRIS*CFLGLTCFRKGAVS Trigger: ACTAACAGCTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCTGGGAGAGTTGGTGAAGAAGCTTAGCGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 |
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| CDS CCA 90 bp | ACTCGCTTTAACCCTTGTTTCACATATTCTTCAATCTTGAGTTCATaGACCCTGGGGATTCCTTGCACACCAGGCCTCCGAAGCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TRFNPCFTYSSILSS*TLGIPCTPGLRSSG Trigger: CCCTGAGCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAATATGTGAAACAAGGGTTAAAGCGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 |
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| CDS-3UTR CAA 90 bp | GGCAGAATTATCCCCAAACCTGAATTTCCTAGAGCAGATGGCATTGTCCCTGAAAAGCTCAGGGCAGACTaGTCGGATGACTGTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GRIIPKPEFPRADGIVPEKLRAD*SDDCLQ Trigger: CTGGAGACAGTCATCCGACAAGTCTGCCCTGAGCTT...TTCAGGGACAATGCCATCTGCTCTAGGAAATTCAGGTTTGGGGATAATTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CAA 90 bp | GAAGAAGATGTGATGGAGGCCATGGGGATCCAGGAGACTCGAAGATTCAAGAAAATCTCATGCTGCTTCTaGGGCTTGACATGTTTCCGA | + |
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Preference number: 5 (lower is better) Translates to: EEDVMEAMGIQETRRFKKISCCF*GLTCFR Trigger: TCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGAT...TTTCTTGAATCTTCGAGTCTCCTGGATCCCCATGGCCTCCATCACATCTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CAA 90 bp | GAAGAAGATGTGATGGAGGCCATGGGGATCCAGGAGACTCGAAGATTCAAGAAACTCTTTGCACCATCTTaGGGTGCCTCTTCTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: EEDVMEAMGIQETRRFKKLFAPS*GASSPF Trigger: AAATGGAGAAGAGGCACCCAAAGATGGTGCAAAGAG...TTTCTTGAATCTTCGAGTCTCCTGGATCCCCATGGCCTCCATCACATCTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS-3UTR CAA 90 bp | TCAGTGGAAGATGCTCTTGAAAGAACTTATGTGCCCCGACTAAAGACATTAGAAACATATTCTTCAATCTaGAGTTCATGGACCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SVEDALERTYVPRLKTLETYSSI*SSWTLG Trigger: CCCCAGGGTCCATGAACTCAAGATTGAAGAATATGT...TTCTAATGTCTTTAGTCGGGGCACATAAGTTCTTTCAAGAGCATCTTCCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005016.16 |
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| CDS GCA 72 bp | GCCAGCTGTGGTGGGTTCAGTCCATCCAGTGCTTCTTaGCATGAGTGGGGGAGTGTGCCCCACAGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ASCGGFSPSSAS*HEWGSVPHRLS Trigger: GGACAGCCTGTGGGGCACACTCCCCCACTCATGGCAAGAAGCACTGGATGGACTGAACCCACCACAGCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160143.2 ENSMUST00000160648.8 |
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| CDS CCA 72 bp | GGCACAAGCTGTGGACTTCAGGGCCAGCAGGGTGAGTaGCCACACAGACCTGTACCTCATTTCCTCCCCGTC | + |
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Preference number: 6 (lower is better) Translates to: GTSCGLQGQQGE*PHRPVPHFLPV Trigger: GACGGGGAGGAAATGAGGTACAGGTCTGTGTGGCCACTCACCCTGCTGGCCCTGAAGTCCACAGCTTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160143.2 ENSMUST00000164439.2 |
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| CDS TCA 72 bp | CTGTGGTGGGTTCAGTCCATCCAGTGCTTCTTGCCATaGGTGGGGGAGTGTGCCCCACAGGCTGTCCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LWWVQSIQCFLP*VGECAPQAVRE Trigger: TTCACGGACAGCCTGTGGGGCACACTCCCCCACTCATGGCAAGAAGCACTGGATGGACTGAACCCACCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160143.2 ENSMUST00000160648.8 |
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| CDS TCA 72 bp | CTCTGGCTGGGGTTCTCCAGGAACTCTGATGGGGTGTaGAAGCCAGGTGTCCGGGTAAAGGCGAGGGCACAA | + |
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Preference number: 6 (lower is better) Translates to: LWLGFSRNSDGV*KPGVRVKARAQ Trigger: TTGTGCCCTCGCCTTTACCCGGACACCTGGCTTTCACACCCCATCAGAGTTCCTGGAGAACCCCAGCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 ENSMUST00000160648.8 ENSMUST00000164439.2 |
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| CDS CCA 72 bp | GTTTCCGAAAAGGAGCTGTTAGTCGGGAGCTCTGGCTaGGGTTCTCCAGGAACTCTGATGGGGTGTGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: VSEKELLVGSSG*GSPGTLMGCES Trigger: GCTTTCACACCCCATCAGAGTTCCTGGAGAACCCCAGCCAGAGCTCCCGACTAACAGCTCCTTTTCGGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 ENSMUST00000164439.2 |
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| CDS CAA 90 bp | TTCACCAACTCTCCCAGCCTCCGGATCTCATGCTGCTTCTTGGGCTaGACATGTTTCCGAAAAGGAGCTGTTAGTCGGGAGCTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FTNSPSLRISCCFLG*TCFRKGAVSRELWL Trigger: CAGCCAGAGCTCCCGACTAACAGCTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCTGGGAGAGTTGGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 |
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| CDS CAA 72 bp | TCTCCCAGCCTCCGGATCTCATGCTGCTTCTTGGGCTaGACATGTTTCCGAAAAGGAGCTGTTAGTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPSLRISCCFLG*TCFRKGAVSRE Trigger: CTCCCGACTAACAGCTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 |
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| CDS CAA 72 bp | TTCTTCAATCTTGAGTTCATGGACCCTGGGGATTCCTaGCACACCAGGCCTCCGAAGCTCAGGGCAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: FFNLEFMDPGDS*HTRPPKLRADL Trigger: CAAGTCTGCCCTGAGCTTCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 |
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| CDS CAA 90 bp | AGCTTCTTCACCAACTCTCCCAGCCTCCGGATCTCATGCTGCTTCTaGGGCTTGACATGTTTCCGAAAAGGAGCTGTTAGTCGGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SFFTNSPSLRISCCF*GLTCFRKGAVSREL Trigger: GAGCTCCCGACTAACAGCTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCTGGGAGAGTTGGTGAAGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 |
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| CDS CAA 72 bp | ACCAACTCTCCCAGCCTCCGGATCTCATGCTGCTTCTaGGGCTTGACATGTTTCCGAAAAGGAGCTGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: TNSPSLRISCCF*GLTCFRKGAVS Trigger: ACTAACAGCTCCTTTTCGGAAACATGTCAAGCCCAAGAAGCAGCATGAGATCCGGAGGCTGGGAGAGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 ENSMUST00000160143.2 |
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| CDS CAA 90 bp | TCCAGACCCACTCGCTTTAACCCTTGTTTCACATATTCTTCAATCTaGAGTTCATGGACCCTGGGGATTCCTTGCACACCAGGCCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: SRPTRFNPCFTYSSI*SSWTLGIPCTPGLR Trigger: TCGGAGGCCTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAATATGTGAAACAAGGGTTAAAGCGAGTGGGTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 |
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| CDS GCA 72 bp | CCACTCGCTTTAACCCTTGTTTCACATATCTTTGGGTaGCTCTTCTCCATTTTGTCCAGAGCCTTCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLALTLVSHIFG*LFSILSRAFRS Trigger: GCTCCTGAAGGCTCTGGACAAAATGGAGAAGAGGCACCCAAAGATATGTGAAACAAGGGTTAAAGCGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160143.2 |
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| CDS TCA 72 bp | CTCGCTTTAACCCTTGTTTCACATATTCTTCAATCTTaGGTTCATGGACCCTGGGGATTCCTTGCACACCAG | + |
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Preference number: 6 (lower is better) Translates to: LALTLVSHILQS*VHGPWGFLAHQ Trigger: CTGGTGTGCAAGGAATCCCCAGGGTCCATGAACTCAAGATTGAAGAATATGTGAAACAAGGGTTAAAGCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005016.16 ENSMUST00000160074.8 |
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