Pregenerated sensors for RRM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030978Ensembl transcript IDs: ENSMUST00000033283.10, ENSMUST00000209630.2, ENSMUST00000211720.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTCTGCCTCGGCGGGCAGGAGAGCCCGCTGCGTCTCCCAGGCCCTaGTTTTCTCAGGATCCACACATCAGGCACTCCTCTCTGTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RLPRRAGEPAASPRP*FSQDPHIRHSSLFS Trigger: GGAGAACAGAGAGGAGTGCCTGATGTGTGGATCCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCTCCTGCCCGCCGAGGCAGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR CCA 90 bp | AGACGGCTATCCTTGCTGCCAGGATGGCATAGTCAGGGTGCTTCGTaGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGTCCAGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: RRLSLLPGWHSQGAS*SRSRLSQQPGCPVP Trigger: TGGAACTGGACACCCTGGCTGCTGAGACAGCCGCGACCTTGACCACGAAGCACCCTGACTATGCCATCCTGGCAGCAAGGATAGCCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
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| 3UTR GCA 90 bp | CTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGCCCGCTaGGTCTCCCAGGCCCTGATTTTCTCAGGATCCACACATCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LSMLKSSASAGRRAR*VSQALIFSGSTHQA Trigger: TGCCTGATGTGTGGATCCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR GCA 90 bp | CTGATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTaGCTCGGCGGGCAGGAGAGCCCGCTGCGTCTCCCAGGCCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: LITKQTHYPIYAQIV*LGGQESPLRLPGPD Trigger: ATCAGGGCCTGGGAGACGCAGCGGGCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033283.10 ENSMUST00000209630.2 |
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| 3UTR GCA 90 bp | CCAAGCAGAGCTGCTGATAACCAAGCAAACCCACTATCCTATCTATaGTCAAATCGTCTGCCTCGGCGGGCAGGAGAGCCCGCTGCGTCT | + |
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Preference number: 1 (lower is better) Translates to: PSRAADNQANPLSYL*SNRLPRRAGEPAAS Trigger: AGACGCAGCGGGCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTATCAGCAGCTCTGCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033283.10 ENSMUST00000209630.2 |
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| 3UTR TCA 90 bp | AGCCATTATTCTCCCTATCTAAAGGGAGGAAACAACCAAGTTTCATaGACAGATGACAGGATGGATACAAGATGGTGTGCACATATGGAG | + |
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Preference number: 1 (lower is better) Translates to: SHYSPYLKGGNNQVS*TDDRMDTRWCAHME Trigger: CTCCATATGTGCACACCATCTTGTATCCATCCTGTCATCTGTTCATGAAACTTGGTTGTTTCCTCCCTTTAGATAGGGAGAATAATGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR CCA 90 bp | TTTCATGAACAGATGACAGGATGGATACAAGATGGTGTGCACATATaGAGGGACAGCGTATCACACTGTGATGTATCTAGATATCATGCA | + |
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Preference number: 1 (lower is better) Translates to: FHEQMTGWIQDGVHI*RDSVSHCDVSRYHA Trigger: TGCATGATATCTAGATACATCACAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTCATCTGTTCATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR TCA 90 bp | AAGACCAGGAAATTCCCCACTCATAGAAGGGCTTTATCAAAAATATaGAAATCGAGTGTTATAAGGTATGAAGACAGAATAAGGCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: KTRKFPTHRRALSKI*KSSVIRYEDRIRPF Trigger: AAAAGGCCTTATTCTGTCTTCATACCTTATAACACTCGATTTTCATATTTTTGATAAAGCCCTTCTATGAGTGGGGAATTTCCTGGTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR-3UTR GCA 90 bp | GGCGGGCAGGAGAGCCCGCTGCGTCTCCCAGGCCCTGATTTTCTCAGGATCCACAGAGCACACCATGGCTaGTGTGTTCCTCTCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GGQESPLRLPGPDFLRIHRAHHG*CVPLLL Trigger: GAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTCT...GTGGATCCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCTCCTGCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGTCCAGTTCCACTGTGGTGACGGATTACTTTCATGGTaGTCTGAGCAGGATCAACAA | + |
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Preference number: 2 (lower is better) Translates to: GQGRGCLSSQGVQFHCGDGLLSW*SEQDQQ Trigger: TTGTTGATCCTGCTCAGATCACCATGAAAGTAATCC...GTCACCACAGTGGAACTGGACACCCTGGCTGCTGAGACAGCCGCGACCTTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCCTGTCCTGGCAGGCACGTCCAAGCAGAGCTGCTGATAACCAAGCAAACTTTAAAGACTGGCTCTaGTCGATGAAAGCACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSLSWQARPSRAADNQANFKDWL*SMKAPL Trigger: GAGAGGTGCTTTCATCGATCAGAGCCAGTCTTTAAA...GTTTGCTTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCACAGAGTGAACTGGATTaGATTAGCGGCAGGCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: NQANPLSYLCSNRLPRRAQSELD*ISGRPR Trigger: ACGAGGCCTGCCGCTAATCCAATCCAGTTCACTCTG...TGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGTTGTTCAGAGTGAACTaGATTGGATTAGCGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ANPLSYLCSNRLPRRAGELFRVN*IGLAAG Trigger: GCCTGCCGCTAATCCAATCCAGTTCACTCTGAACAA...CTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGTGCAAGTTAGAGACGGCTATCCTTGCTGCCAGGATGGCATAGTCAGGCCAGTTCCACTGTGGTaGCCCCACTATATAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: FFVQVRDGYPCCQDGIVRPVPLW*PHYIGL Trigger: AAGGCCTATATAGTGGGGTCACCACAGTGGAACTGG...CCTGACTATGCCATCCTGGCAGCAAGGATAGCCGTCTCTAACTTGCACAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGATTTTCTCAGGATCCACACATCAGGCACTCCTCTCTGTTCTCCAAAGAAGCACCTCTCTCGGCTaGCATCTTGAGAACAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ALIFSGSTHQALLSVLQRSTSLG*HLENSL Trigger: AAGACTGTTCTCAAGATGGCAGCCGAGAGAGGTGCT...TCTTTGGAGAACAGAGAGGAGTGCCTGATGTGTGGATCCTGAGAAAATCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCCAAAGAGCACACCATaGCTGCTGTGTTCCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ADNQANPLSYLCSNRLPRPKSTP*LLCSSP Trigger: AGGAGAGGAACACAGCAGCCATGGTGTGCTCTTTGG...CCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTATCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR TCA 90 bp | ATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGTTGAGAACAGTCTTCTaGGAGATTTCCCACACGGTC | + |
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Preference number: 2 (lower is better) Translates to: ITKQTHYPIYAQIVCLGGLRTVF*EISHTV Trigger: GACCGTGTGGGAAATCTCTCAGAAGACTGTTCTCAA...CCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR TCA 90 bp | ACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATTCTCGGCTGCCATCTTaGGAACAGTCTTCTGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: TVEVHTSEFAVVGLSNMDSRLPS*EQSSER Trigger: TCTCTCAGAAGACTGTTCTCAAGATGGCAGCCGAGA...ATCCATATTGCTGAGCCCAACTACGGCAAACTCACTAGTATGCACTTCTACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCAAGTTAGAGACGGCTATCCTTGCTGCCAGGATGGCATAGTCAGGGTGCTTCCACTATATAGGCCTTaGATTACTTTCATGGTGATC | + |
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Preference number: 2 (lower is better) Translates to: VQVRDGYPCCQDGIVRVLPLYRP*ITFMVI Trigger: GATCACCATGAAAGTAATCCAAGGCCTATATAGTGG...AAGCACCCTGACTATGCCATCCTGGCAGCAAGGATAGCCGTCTCTAACTTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTAAGTAATACATTCCAGTCTTTAAACCCTGCTTCCAACCGTAGAAGTGCAACTGGCTCTGATCGATaGAAGCACCTCTCTCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SLSNTFQSLNPASNRRSATGSDR*KHLSRL Trigger: CAGCCGAGAGAGGTGCTTTCATCGATCAGAGCCAGT...TGCACTTCTACGGTTGGAAGCAGGGTTTAAAGACTGGAATGTATTACTTAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR-3UTR TCA 90 bp | ATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCCAAAGCCTCTACTTTaGTTCCTAATATCAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ITKQTHYPIYAQIVCLGGPKPLL*FLISKL Trigger: CAGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGG...CCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR-3UTR TCA 90 bp | AATGGTGCTGCAAATATAGCTCCTCAAAGTCAAACAGAATTATATAGTCCAGCAAGTTTCATGAACAGATaGCAGGATGGATACAAGATG | + |
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Preference number: 2 (lower is better) Translates to: NGAANIAPQSQTELYSPASFMNR*QDGYKM Trigger: CATCTTGTATCCATCCTGTCATCTGTTCATGAAACT...TGCTGGACTATATAATTCTGTTTGACTTTGAGGAGCTATATTTGCAGCACCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR TCA 72 bp | CGGCGGGCAGGAGAGCCCGCTGCGTCTCCCAGGCCCTaGTTTTCTCAGGATCCACACATCAGGCACTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RRAGEPAASPRP*FSQDPHIRHSS Trigger: AGAGGAGTGCCTGATGTGTGGATCCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCTCCTGCCCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR CCA 72 bp | TCCTTGCTGCCAGGATGGCATAGTCAGGGTGCTTCGTaGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: SLLPGWHSQGAS*SRSRLSQQPGC Trigger: ACACCCTGGCTGCTGAGACAGCCGCGACCTTGACCACGAAGCACCCTGACTATGCCATCCTGGCAGCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
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| 3UTR GCA 72 bp | AAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTaGCTCGGCGGGCAGGAGAGCCCGCTGCGTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: KQTHYPIYAQIV*LGGQESPLRLP Trigger: TGGGAGACGCAGCGGGCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033283.10 ENSMUST00000209630.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCTCGGCGGGCAGGAGAGCCCGCTGCGTCTCCCAGGCCCTGATTTTCTCAGGTCTTTCAGTTTTTCCTaGTTCAGAGTGAACTGGATT | + |
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Preference number: 3 (lower is better) Translates to: CLGGQESPLRLPGPDFLRSFSFS*FRVNWI Trigger: AATCCAGTTCACTCTGAACAAGGAAAAACTGAAAGA...CCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCTCCTGCCCGCCGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR GCA 72 bp | GCTGCTGATAACCAAGCAAACCCACTATCCTATCTATaGTCAAATCGTCTGCCTCGGCGGGCAGGAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: AADNQANPLSYL*SNRLPRRAGEP Trigger: GGGCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTATCAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033283.10 ENSMUST00000209630.2 |
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| 3UTR TCA 72 bp | CTGTCTCAGCAGCCAGGGTGTCCAGTTCCACTGTGGTaGCCCCACTATATAGGCCTTGGATTACTTTCATGG | + |
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Preference number: 3 (lower is better) Translates to: LSQQPGCPVPLW*PHYIGLGLLSW Trigger: CCATGAAAGTAATCCAAGGCCTATATAGTGGGGTCACCACAGTGGAACTGGACACCCTGGCTGCTGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
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| 3UTR CCA 72 bp | TGTAGAAACAGTACTGTAAGTCGTGGCTCCCTGTCCTaGCAGGCACGTCCAAGCAGAGCTGCTGATAACCAA | + |
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Preference number: 3 (lower is better) Translates to: CRNSTVSRGSLS*QARPSRAADNQ Trigger: TTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAGCCACGACTTACAGTACTGTTTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033283.10 ENSMUST00000209630.2 |
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| 3UTR GCA 72 bp | TGTTTCTTTGTGCAAGTTAGAGACGGCTATCCTTGCTaGCAGGATGGCATAGTCAGGGTGCTTCGTGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: CFFVQVRDGYPC*QDGIVRVLRGQ Trigger: TTGACCACGAAGCACCCTGACTATGCCATCCTGGCAGCAAGGATAGCCGTCTCTAACTTGCACAAAGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
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| 3UTR TCA 72 bp | TTGGGCTCAGCAATATGGATGTTTAAAGACTGGCTCTaGTCGATGAAAGCACCTCTCTCGGCTGCCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: LGSAIWMFKDWL*SMKAPLSAAIL Trigger: CAAGATGGCAGCCGAGAGAGGTGCTTTCATCGATCAGAGCCAGTCTTTAAACATCCATATTGCTGAGCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| 3UTR TCA 72 bp | AATCAGTCAAATCAAACTAAATCTCTTTGCCCAAACTaGGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAG | + |
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Preference number: 3 (lower is better) Translates to: NQSNQTKSLCPN*EWPGRESWRDE Trigger: CTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAAAGAGATTTAGTTTGATTTGACTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR CCA 72 bp | CAGATGACAGGATGGATACAAGATGGTGTGCACATATaGAGGGACAGCGTATCACACTGTGATGTATCTAGA | + |
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Preference number: 3 (lower is better) Translates to: QMTGWIQDGVHI*RDSVSHCDVSR Trigger: TCTAGATACATCACAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR CCA 72 bp | GAGGAAACAACCAAGTTTCATGAACAGATGACAGGATaGATACAAGATGGTGTGCACATATGGAGGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: EETTKFHEQMTG*IQDGVHIWRDS Trigger: GCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTCATCTGTTCATGAAACTTGGTTGTTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR TCA 72 bp | TCTAAAGGGAGGAAACAACCAAGTTTCATGAACAGATaGCAGGATGGATACAAGATGGTGTGCACATATGGA | + |
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Preference number: 3 (lower is better) Translates to: SKGRKQPSFMNR*QDGYKMVCTYG Trigger: TCCATATGTGCACACCATCTTGTATCCATCCTGTCATCTGTTCATGAAACTTGGTTGTTTCCTCCCTTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR-3UTR CAA 90 bp | GTTAACAAGATTTCATCCTGGGGCAGGAAAGGGCATATGTTAACACTAGATATCCCCAAAGCCTCTACTTaGATTCCTAATATCAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VNKISSWGRKGHMLTLDIPKAST*IPNIKA Trigger: AGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGGG...GATATCTAGTGTTAACATATGCCCTTTCCTGCCCCAGGATGAAATCTTGTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR TCA 72 bp | CAGGAAGGCTCTTTAGTATTCCCAAAGCCTCTACTTTaGTTCCTAATATCAAAGCTGGCTTTGGTTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: QEGSLVFPKPLL*FLISKLALVFC Trigger: ACAGAAAACCAAAGCCAGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAGCCTTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR TCA 72 bp | GCAAGCCATACAAGTGCAAATACTGCATTATGTGTATaGGGAATACATATTCAAAAAGGTGTAAGAAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: ASHTSANTALCV*GIHIQKGVRSV Trigger: CACACTTCTTACACCTTTTTGAATATGTATTCCTCATACACATAATGCAGTATTTGCACTTGTATGGCTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| 3UTR CCA 72 bp | AGAAACTGTCAATTTTATGTTAACAAGATTTCATCCTaGGGCAGGAAAGGGCATATGTTAACACTAGATATC | + |
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Preference number: 3 (lower is better) Translates to: RNCQFYVNKISS*GRKGHMLTLDI Trigger: GATATCTAGTGTTAACATATGCCCTTTCCTGCCCCAGGATGAAATCTTGTTAACATAAAATTGACAGTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS-3UTR CCA 90 bp | GGCTCCCTGTCCTGGCAGGCACGTCCAAGCAGAGCTGCTGATAACCAAGCAAACGTTCCCAGGTTCTGCTaGTTGCTCTTCCGGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: GSLSWQARPSRAADNQANVPRFC*LLFRLQ Trigger: CTGTAACCGGAAGAGCAACCAGCAGAACCTGGGAAC...GTTTGCTTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS-3UTR CCA 90 bp | GGCTCCCTGTCCTGGCAGGCACGTCCAAGCAGAGCTGCTGATAACCAAGCAAACCCAAAGAGCACACCATaGCTGCTGTGTTCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSLSWQARPSRAADNQANPKSTP*LLCSSP Trigger: AGGAGAGGAACACAGCAGCCATGGTGTGCTCTTTGG...GTTTGCTTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS-3UTR CCA 90 bp | TTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAGACTTCCTAAGTCAGGGTGCTTCGTaGTCAAGGTCGCGGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LPKLRMARQGKLERRDFLSQGAS*SRSRLS Trigger: AGACAGCCGCGACCTTGACCACGAAGCACCCTGACT...TAGGAAGTCTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS-3UTR GCA 90 bp | GGCGGGCAGGAGAGCCCGCTGCGTCTCCCAGGCCCTGATTTTCTCAGGATCCACCAGGAATTTCTGGTATaGTCTGAAAAAGGAAAACTG | + |
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Preference number: 4 (lower is better) Translates to: GGQESPLRLPGPDFLRIHQEFLV*SEKGKL Trigger: CAGTTTTCCTTTTTCAGAGCATACCAGAAATTCCTG...GTGGATCCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCTCCTGCCCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| CDS-3UTR CCA 90 bp | GGCTCCCTGTCCTGGCAGGCACGTCCAAGCAGAGCTGCTGATAACCAAGCAAACTTGTTCAGAGTGAACTaGATTGGATTAGCGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GSLSWQARPSRAADNQANLFRVN*IGLAAG Trigger: GCCTGCCGCTAATCCAATCCAGTTCACTCTGAACAA...GTTTGCTTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS-3UTR TCA 90 bp | ACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGCCGTCTGGGACTCAATaGTGGCATACCAAAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TKQTHYPIYAQIVCLGGQPSGTQ*WHTKAA Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCCCAGACGG...CTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS-3UTR TCA 90 bp | GCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGTCTCGGCTGCCATCTTaGGAACAGTCTTCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ANPLSYLCSNRLPRRAGESRLPS*EQSSER Trigger: TCTCTCAGAAGACTGTTCTCAAGATGGCAGCCGAGA...CTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS-3UTR TCA 90 bp | GAGAGCCCGCTGCGTCTCCCAGGCCCTGATTTTCTCAGGATCCACACATCAGGCCTGAAAAAGGAAAACTaGATGGAGCCATTGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: ESPLRLPGPDFLRIHTSGLKKEN*MEPLHA Trigger: TGCATGCAATGGCTCCATTCAGTTTTCCTTTTTCAG...GCCTGATGTGTGGATCCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209630.2 |
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| CDS-3UTR GCA 90 bp | GCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGCCATGGGAGAGTGTCTaGCGTTGTGCGGATTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: ANPLSYLCSNRLPRRAGEPWESV*RCADLC Trigger: ACATAAATCCGCACAACGGCAGACACTCTCCCATGG...CTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | GGCTCCCTGTCCTGGCAGGCACGTCCAAGCAGAGCTGCTGATAACCAAGCAAACACCCTCATCAACATATaGTGTGGTCTTTCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GSLSWQARPSRAADNQANTLINI*CGLSAT Trigger: AGTGGCTGAAAGACCACAGCATATGTTGATGAGGGT...GTTTGCTTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | CAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGCCCAGGTTCTGCTGGTTaGTCTTCCGGTTACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTHYPIYAQIVCLGGQESPGSAG*SSGYRN Trigger: ATTCCTGTAACCGGAAGAGCAACCAGCAGAACCTGG...GCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | CAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGCCGATGTAGCTACCAGTaGCCCGAATACAACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QTHYPIYAQIVCLGGQESRCSYQ*PEYNSQ Trigger: CTGTGAGTTGTATTCGGGCCACTGGTAGCTACATCG...GCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | GACAGGATGGATACAAGATGGTGTGCACATATGGAGGGACAGCGTATCACACTGACTGGCTCTGATCGATaGAAGCACCTCTCTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRMDTRWCAHMEGQRITLTGSDR*KHLSRL Trigger: CAGCCGAGAGAGGTGCTTTCATCGATCAGAGCCAGT...CAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | ATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGTCCTTGCTGCCAGGATaGCATAGTCAGGGTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ITKQTHYPIYAQIVCLGGSLLPG*HSQGAS Trigger: CGAAGCACCCTGACTATGCCATCCTGGCAGCAAGGA...CCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | TTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAGACTTCCTATTTGTAGAGCATGTATaGGGTACCGGTCTCCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPKLRMARQGKLERRDFLFVEHV*GTGLRL Trigger: CAGACGGAGACCGGTACCCCATACATGCTCTACAAA...TAGGAAGTCTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | ACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGTTGAGAACAGTCTTCTaGGAGATTTCCCACACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKQTHYPIYAQIVCLGGQLRTVF*EISHTV Trigger: GACCGTGTGGGAAATCTCTCAGAAGACTGTTCTCAA...CTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | GCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGTTTAAAGACTGGCTCTaGTCGATGAAAGCACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ANPLSYLCSNRLPRRAGEFKDWL*SMKAPL Trigger: GAGAGGTGCTTTCATCGATCAGAGCCAGTCTTTAAA...CTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | CAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGAGCCAGGAATTTCTGGTATaGTCTGAATGGAGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTHYPIYAQIVCLGGQESQEFLV*SEWSHC Trigger: GCAATGGCTCCATTCAGAGCATACCAGAAATTCCTG...GCTCTCCTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | GACAGGATGGATACAAGATGGTGTGCACATATGGAGGGACAGCGTATCACACTGAGAGCACACCATGGCTaGTGTGTTCCTCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRMDTRWCAHMEGQRITLRAHHG*CVPLLL Trigger: GAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTCT...CAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGATGGATACAAGATGGTGTGCACATATGGAGGGACAGCGTATCACACTGAGGGGCCATACTCCTTaGCTAGTTCACAGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRMDTRWCAHMEGQRITLRGHTP*LVHSWL Trigger: AAGCCAGCTGTGAACTAGCCAAGGAGTATGGCCCCT...CAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | AATCTCTTTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAGAATTGGGACACATCAATaGCCAGTCCTGGTTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLFAQTENGQAGKAGETRIGTHQ*PVLVSL Trigger: GAGACTAACCAGGACTGGTCATTGATGTGTCCCAAT...TCTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAAAGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | ATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITKQTHYPIYAQIVCLGGTGCCI*WFPGSA Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...CCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | ACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGACGTATGTTCCGGTGTaGCATACATATTCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKQTHYPIYAQIVCLGGQTYVPV*HTYSEP Trigger: TGGCTCTGAATATGTATGTCACACCGGAACATACGT...CTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | GACAGGATGGATACAAGATGGTGTGCACATATGGAGGGACAGCGTATCACACTGATGGTTCCCAGGTTCTaGTGGTTGCTCTTCCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DRMDTRWCAHMEGQRITLMVPRF*WLLFRL Trigger: TAACCGGAAGAGCAACCAGCAGAACCTGGGAACCAT...CAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | AACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGTACCCCAATTCCAATaGGCCGATGGCGTTTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQANPLSYLCSNRLPRRAVPQFQ*ADGVYL Trigger: CAAATAAACGCCATCGGCCCATTGGAATTGGGGTAC...TGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | AACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCATTATTCCCCAGAATCTaGGCAGTTGAAGCAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQANPLSYLCSNRLPRRALFPRI*AVEAVG Trigger: GCCTACTGCTTCAACTGCCCAGATTCTGGGGAATAA...TGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | CAAATCAAACTAAATCTCTTTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTTGTCGAGTGTTGAGCTaGCCACCATGGGAGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QIKLNLFAQTENGQAGKACRVLS*PPWESV Trigger: GACACTCTCCCATGGTGGCCAGCTCAACACTCGACA...AGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAAAGAGATTTAGTTTGATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGATGGATACAAGATGGTGTGCACATATGGAGGGACAGCGTATCACACTGGACCAGGACACTCATTaGGACACATCAATGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRMDTRWCAHMEGQRITLDQDTH*DTSMTS Trigger: ACTGGTCATTGATGTGTCCCAATGAGTGTCCTGGTC...CAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | GCTGATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGTCTCCACTCGCTTCATaGAGAGATCTGGGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ADNQANPLSYLCSNRLPRSPLAS*RDLGSK Trigger: TTTGGATCCCAGATCTCTTCATGAAGCGAGTGGAGA...CCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | GACAGGATGGATACAAGATGGTGTGCACATATGGAGGGACAGCGTATCACACTGGCATACCAAAGCTGCTaGGCTTTTACAACTTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DRMDTRWCAHMEGQRITLAYQSC*AFTTFR Trigger: CCGAAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...CAGTGTGATACGCTGTCCCTCCATATGTGCACACCATCTTGTATCCATCCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | TTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAGACTTCCTAATTCCAATGGGCCGATaGCGTTTATTTGATAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPKLRMARQGKLERRDFLIPMGR*RLFDKC Trigger: ACACTTATCAAATAAACGCCATCGGCCCATTGGAAT...TAGGAAGTCTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGTGGTATAAGGCTCAATaGACTCATTATTCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKQTHYPIYAQIVCLGGQWYKAQ*THYSPE Trigger: TTCTGGGGAATAATGAGTCCATTGAGCCTTATACCA...CTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGGAGTGTAGATGTTACTaGTATAAGGCTCAATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TKQTHYPIYAQIVCLGGQECRCY*YKAQWT Trigger: AGTCCATTGAGCCTTATACCAGTAACATCTACACTC...CTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | AGACGAGACTTCCTAAGTCTCCTCACTAATTTGCAGGAAGGCTCTTTAGTATTCGTACCGGTCTCCGTCTaGGACTCAATGATGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RRDFLSLLTNLQEGSLVFVPVSV*DSMMAY Trigger: GTATGCCATCATTGAGTCCCAGACGGAGACCGGTAC...GAATACTAAAGAGCCTTCCTGCAAATTAGTGAGGAGACTTAGGAAGTCTCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | TTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAGACTTCCTAGGGCTCCATAGTAAATaGTTTCAAAGATCTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPKLRMARQGKLERRDFLGLHSK*FQRSAY Trigger: ATAAGCAGATCTTTGAAACCATTTACTATGGAGCCC...TAGGAAGTCTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | AGACGAGACTTCCTAAGTCTCCTCACTAATTTGCAGGAAGGCTCTTTAGTATTCCAGAGTGAACTGGATTaGATTAGCGGCAGGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRDFLSLLTNLQEGSLVFQSELD*ISGRPR Trigger: ACGAGGCCTGCCGCTAATCCAATCCAGTTCACTCTG...GAATACTAAAGAGCCTTCCTGCAAATTAGTGAGGAGACTTAGGAAGTCTCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | GCTGATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGTCAATATCTTCTTTGTaGATCCCCACAGAAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADNQANPLSYLCSNRLPRSISSL*IPTETL Trigger: GAGGGTTTCTGTGGGGATTCACAAAGAAGATATTGA...CCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGGAAGGCTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCGACGGCTATCCTTGCTaGCAGGATGGCATAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FAGRLFSIPKASTLIPNIDGYPC*QDGIVR Trigger: CCTGACTATGCCATCCTGGCAGCAAGGATAGCCGTC...GATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAGCCTTCCTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | ATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGATATACTCTCAGCATTaGCACAAGGCCATTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ITKQTHYPIYAQIVCLGGIYSQH*HKAIRI Trigger: AATTCTAATGGCCTTGTGCCAATGCTGAGAGTATAT...CCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGGAAGGCTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCAGCACCTCTCTCGGCTaGCATCTTGAGAACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FAGRLFSIPKASTLIPNISTSLG*HLENSL Trigger: AAGACTGTTCTCAAGATGGCAGCCGAGAGAGGTGCT...GATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAGCCTTCCTGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | TTGTTAAAAATGATATTTACACTGTGTAGAAACAGTACTGTAAGTCGTGGCTCCCCAGTTCCACTGTGGTaGCCCCACTATATAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKMIFTLCRNSTVSRGSPVPLW*PHYIGL Trigger: AAGGCCTATATAGTGGGGTCACCACAGTGGAACTGG...GGAGCCACGACTTACAGTACTGTTTCTACACAGTGTAAATATCATTTTTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | CAAATCAAACTAAATCTCTTTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTCAGCCACTTTACCATTaGTCTTCAACAAATATGACC | + |
|
Preference number: 4 (lower is better) Translates to: QIKLNLFAQTENGQAGKAQPLYH*SSTNMT Trigger: GGTCATATTTGTTGAAGATCAATGGTAAAGTGGCTG...AGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAAAGAGATTTAGTTTGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | AATGGTGCTGCAAATATAGCTCCTCAAAGTCAAACAGAATTATATAGTCCAGCAGAAGAATACCCTTGCTaGCTGGAGATCCCTCATACG | + |
|
Preference number: 4 (lower is better) Translates to: NGAANIAPQSQTELYSPAEEYPC*LEIPHT Trigger: CGTATGAGGGATCTCCAGTCAGCAAGGGTATTCTTC...TGCTGGACTATATAATTCTGTTTGACTTTGAGGAGCTATATTTGCAGCACCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | AGACGAGACTTCCTAAGTCTCCTCACTAATTTGCAGGAAGGCTCTTTAGTATTCTTGGGCTCAGCAATATaGATGTTTAAAGACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRDFLSLLTNLQEGSLVFLGSAI*MFKDWL Trigger: GAGCCAGTCTTTAAACATCCATATTGCTGAGCCCAA...GAATACTAAAGAGCCTTCCTGCAAATTAGTGAGGAGACTTAGGAAGTCTCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| 3UTR CAA 72 bp | GCAGGAAGGCTCTTTAGTATTCCCAAAGCCTCTACTTaGATTCCTAATATCAAAGCTGGCTTTGGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGRLFSIPKAST*IPNIKAGFGFL Trigger: CAGAAAACCAAAGCCAGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAGCCTTCCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | TTGTTAAAAATGATATTTACACTGTGTAGAAACAGTACTGTAAGTCGTGGCTCCTTGCAATCTTCTCCTTaGGAGGCTTCCAGTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLKMIFTLCRNSTVSRGSLQSSP*EASSPT Trigger: TGTGGGACTGGAAGCCTCTCAAGGAGAAGATTGCAA...GGAGCCACGACTTACAGTACTGTTTCTACACAGTGTAAATATCATTTTTAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | AATGGTGCTGCAAATATAGCTCCTCAAAGTCAAACAGAATTATATAGTCCAGCAATCTGGGATCCAAAGTaGAAAGAAGAGATCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGAANIAPQSQTELYSPAIWDPK*KEEIAC Trigger: GCACGCGATCTCTTCTTTGCACTTTGGATCCCAGAT...TGCTGGACTATATAATTCTGTTTGACTTTGAGGAGCTATATTTGCAGCACCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | CTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCAAAGCTGGCTTTGGATTACTTTCATGGTaGTCTGAGCAGGATCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LFSIPKASTLIPNIKAGFGLLSW*SEQDQQ Trigger: TTGTTGATCCTGCTCAGATCACCATGAAAGTAATCC...AAAGCCAGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGGAAGGCTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCAGCCAAGTTACAAACTaGAACCTCATCTTTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FAGRLFSIPKASTLIPNISQVTN*NLIFTG Trigger: ACCAGTAAAGATGAGGTTGCAGTTTGTAACTTGGCT...GATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAGCCTTCCTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR TCA 90 bp | CTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCAAAGCTGGCTTTCCTCCATCACATCACTaGACACTTTCTTTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFSIPKASTLIPNIKAGFPPSHH*TLSLFL Trigger: AAGAAACAAAGAAAGTGTTCAGTGATGTGATGGAGG...AAAGCCAGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGGAAGGCTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCGACTTTAGTGACTTCTaGCAGTTTCTCAAAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FAGRLFSIPKASTLIPNIDFSDF*QFLKVI Trigger: TATGACTTTGAGAAACTGGCAGAAGTCACTAAAGTC...GATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAGCCTTCCTGCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR GCA 90 bp | ATGCAAGCCATACAAGTGCAAATACTGCATTATGTGTATGAGGAATACATATTCCCTTATACCATACTTTaGAATCTTCTCCTTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQAIQVQILHYVYEEYIFPYTIL*NLLLER Trigger: CCTCTCAAGGAGAAGATTGCAAAGTATGGTATAAGG...GAATATGTATTCCTCATACACATAATGCAGTATTTGCACTTGTATGGCTTGCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CCA 90 bp | TTGTTAAAAATGATATTTACACTGTGTAGAAACAGTACTGTAAGTCGTGGCTCCCCACTATATAGGCCTTaGATTACTTTCATGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLKMIFTLCRNSTVSRGSPLYRP*ITFMVI Trigger: GATCACCATGAAAGTAATCCAAGGCCTATATAGTGG...GGAGCCACGACTTACAGTACTGTTTCTACACAGTGTAAATATCATTTTTAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGATGGCATAGTCAGGGTGCTTCGTGGTCAAGGTCGCGGCTGTCTCAGCCAATCTCAGACAGGGTaGGAGGGAGTCTCGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CQDGIVRVLRGQGRGCLSQSQTG*EGVSLD Trigger: ATCAAGCGAGACTCCCTCCAACCCTGTCTGAGATTG...GCTGAGACAGCCGCGACCTTGACCACGAAGCACCCTGACTATGCCATCCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCAGGATGGCATAGTCAGGGTGCTTCGTGGTCAAGGTCGCGGCTGTCTCAGAAACATAACTCGCTCTaGGCGGCCATCTCTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPGWHSQGASWSRSRLSQKHNSL*AAISED Trigger: ATCCTCAGAGATGGCCGCCAAGAGCGAGTTATGTTT...CTGAGACAGCCGCGACCTTGACCACGAAGCACCCTGACTATGCCATCCTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211720.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAGACTTCCTACGGTTGGTCCCAGCATaGAAGAGAGTAGGAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPKLRMARQGKLERRDFLRLVPA*KRVGEA Trigger: TGCCTCTCCTACTCTCTTCAATGCTGGGACCAACCG...TAGGAAGTCTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | ACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGCCCAGGTTCTGCTGGTaGCTCTTCCGGTTACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TKQTHYPIYAQIVCLGGQPRFCW*LFRLQE Trigger: TTCCTGTAACCGGAAGAGCAACCAGCAGAACCTGGG...CTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | ACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGCAGAAACATAACTCGCTCTaGGCGGCCATCTCGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TKQTHYPIYAQIVCLGGQKHNSL*AAISLD Trigger: ATCAAGCGAGATGGCCGCCAAGAGCGAGTTATGTTT...CTGCCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | GCTGATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGGACAGCTGTGGGCGGTaGGTCCCAGCATTGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ADNQANPLSYLCSNRLPRDSCGR*VPALKR Trigger: TCTCTTCAATGCTGGGACCAACCGCCCACAGCTGTC...CCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTATCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 90 bp | GGCAGAATTCAGGCGATCCTTATTGGCCATAACAATGTCGAGTGTTaGGCTGGCCACCATGGGAGAGTGTCTGCCGTTGTGCGGATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GRIQAILIGHNNVEC*AGHHGRVSAVVRIY Trigger: ATAAATCCGCACAACGGCAGACACTCTCCCATGGTGGCCAGCTCAACACTCGACATTGTTATGGCCAATAAGGATCGCCTGAATTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCTGTCCTGGCAGGCACGTCCAAGCAGAGCTGCTGATAACCAAGCAAACACTTTCTTTGTTTCTTaGTGCAAGTTAGAGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSLSWQARPSRAADNQANTFFVS*CKLETA Trigger: AGCCGTCTCTAACTTGCACAAAGAAACAAAGAAAGT...GTTTGCTTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 90 bp | CTGGTTAGTCTCCACTCGCTTCATGAAGAGATCTGGGATCCAAAGTaGAAAGAAGAGATCGCGTGCTCGCTGTTCTTCCTTGCCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVSLHSLHEEIWDPK*KEEIACSLFFLACV Trigger: AACACAGGCAAGGAAGAACAGCGAGCACGCGATCTCTTCTTTGCACTTTGGATCCCAGATCTCTTCATGAAGCGAGTGGAGACTAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | ATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGATTTCTGTACACAGGTaGCTGCATTTGATGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ITKQTHYPIYAQIVCLGGISVHR*LHLMVP Trigger: GGGAACCATCAAATGCAGCAACCTGTGTACAGAAAT...CCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
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| CDS TCA 90 bp | TTAATAACTGGGCTTCTGGGCTCTCAAAGGGGTATCTCATCAGGATaGAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LITGLLGSQRGISSG*KHLLNLVPQFQWAD Trigger: ATCGGCCCATTGGAATTGGGGTACAAGGTTTAGCAGATGCTTTCATCCTGATGAGATACCCCTTTGAGAGCCCAGAAGCCCAGTTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 90 bp | CTTCATGAAGAGATCTGGGATCCAAAGTGCAAAGAAGAGATCGCGTaGTCGCTGTTCTTCCTTGCCTGTGTTCTTCTTCAAGTCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LHEEIWDPKCKEEIA*SLFFLACVLLQVKE Trigger: TTCCTTGACTTGAAGAAGAACACAGGCAAGGAAGAACAGCGAGCACGCGATCTCTTCTTTGCACTTTGGATCCCAGATCTCTTCATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 90 bp | CCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTaGCTTCCAGGGCTCCATAGTAAATGGTTTCAAAGATCTGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PHTFHRGHTPWLVHS*LPGLHSKWFQRSAY Trigger: ATAAGCAGATCTTTGAAACCATTTACTATGGAGCCCTGGAAGCCAGCTGTGAACTAGCCAAGGAGTATGGCCCCTATGAAACGTATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | TTGCCCAAACTGAGAATGGCCAGGCAGGGAAAGCTGGAGAGACGAGACTTCCTATCTTTCAGTTTTTCCTaGTTCAGAGTGAACTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LPKLRMARQGKLERRDFLSFSFS*FRVNWI Trigger: AATCCAGTTCACTCTGAACAAGGAAAAACTGAAAGA...TAGGAAGTCTCGTCTCTCCAGCTTTCCCTGCCTGGCCATTCTCAGTTTGGGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 90 bp | CTTTACTGGTGTACTCTACTATTTCTGTACACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGTTACAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LYWCTLLFLYTGCCI*WFPGSAGCSSGYRN Trigger: ATTCCTGTAACCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGTACACCAGTAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 90 bp | GGATCCAAAGTGCAAAGAAGAGATCGCGTGCTCGCTGTTCTTCCTTaGCTGTGTTCTTCTTCAAGTCAAGGAACTCAAAGATGTCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSKVQRRDRVLAVLP*LCSSSSQGTQRCLS Trigger: ACTTAGACATCTTTGAGTTCCTTGACTTGAAGAAGAACACAGGCAAGGAAGAACAGCGAGCACGCGATCTCTTCTTTGCACTTTGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 90 bp | ACCTTGATCCACATAGCGAGCTGTGTTGTTATATACTCTCAGCATTaGCACAAGGCCATTAGAATTGCCATTAGTCCCAGCGATGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLIHIASCVVIYSQH*HKAIRIAISPSDVA Trigger: AGCTACATCGCTGGGACTAATGGCAATTCTAATGGCCTTGTGCCAATGCTGAGAGTATATAACAACACAGCTCGCTATGTGGATCAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | ATAACCAAGCAAACCCACTATCCTATCTATGCTCAAATCGTCTGCCTCGGCGGGTCAGCCACTTTACCATaGATCTTCAACAAATATGAC | + |
|
Preference number: 5 (lower is better) Translates to: ITKQTHYPIYAQIVCLGGSATLP*IFNKYD Trigger: GTCATATTTGTTGAAGATCAATGGTAAAGTGGCTGA...CCCGCCGAGGCAGACGATTTGAGCATAGATAGGATAGTGGGTTTGCTTGGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 90 bp | ATCAACAAAGTCCATGTTGAGTCCATAACAGAGTTTCTGGATTCGTaGTGTAATTTTGTCAAACATAACTCGCTCTTGGCGGCCATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: INKVHVESITEFLDS*CNFVKHNSLLAAIS Trigger: CGAGATGGCCGCCAAGAGCGAGTTATGTTTGACAAAATTACATCACGAATCCAGAAACTCTGTTATGGACTCAACATGGACTTTGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | CTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCAAAGCTGGCTTTGCTCGCTGTTCTTCCTaGCCTGTGTTCTTCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFSIPKASTLIPNIKAGFARCSS*PVFFFK Trigger: CTTGAAGAAGAACACAGGCAAGGAAGAACAGCGAGC...AAAGCCAGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | TTGTTAAAAATGATATTTACACTGTGTAGAAACAGTACTGTAAGTCGTGGCTCCACAAGGCCATTAGAATaGCCATTAGTCCCAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLKMIFTLCRNSTVSRGSTRPLE*PLVPAM Trigger: CATCGCTGGGACTAATGGCAATTCTAATGGCCTTGT...GGAGCCACGACTTACAGTACTGTTTCTACACAGTGTAAATATCATTTTTAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | CTCTTTAGTATTCCCAAAGCCTCTACTTTGATTCCTAATATCAAAGCTGGCTTTCACGGTCTTATAGAGTaGCTTCAGGTCATCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LFSIPKASTLIPNIKAGFHGLIE*LQVIRN Trigger: ATTCCTGATGACCTGAAGCAACTCTATAAGACCGTG...AAAGCCAGCTTTGATATTAGGAATCAAAGTAGAGGCTTTGGGAATACTAAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS-3UTR CAA 90 bp | GTTAACAAGATTTCATCCTGGGGCAGGAAAGGGCATATGTTAACACTAGATATCGGTTGTAGGTTTCAATaGCAGCATCAATATCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VNKISSWGRKGHMLTLDIGCRFQ*QHQYLL Trigger: AAGAAGATATTGATGCTGCAATTGAAACCTACAACC...GATATCTAGTGTTAACATATGCCCTTTCCTGCCCCAGGATGAAATCTTGTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 90 bp | ATCAATTATTTTATTCAGATTTCGGACAATGACTTTAGTGACTTCTaGCAGTTTCTCAAAGTCATACGTATGTTCCGGTGTGACATACAT | + |
|
Preference number: 5 (lower is better) Translates to: INYFIQISDNDFSDF*QFLKVIRMFRCDIH Trigger: ATGTATGTCACACCGGAACATACGTATGACTTTGAGAAACTGGCAGAAGTCACTAAAGTCATTGTCCGAAATCTGAATAAAATAATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | CAGGCGATCCTTATTGGCCATAACAATGTCGAGTGTTaGGCTGGCCACCATGGGAGAGTGTCTGCCGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QAILIGHNNVEC*AGHHGRVSAVV Trigger: CACAACGGCAGACACTCTCCCATGGTGGCCAGCTCAACACTCGACATTGTTATGGCCAATAAGGATCGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 72 bp | GAGATCCCTCATACGTTTCATAGGGGCCATACTCCTTaGCTAGTTCACAGCTGGCTTCCAGGGCTCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: EIPHTFHRGHTP*LVHSWLPGLHS Trigger: ACTATGGAGCCCTGGAAGCCAGCTGTGAACTAGCCAAGGAGTATGGCCCCTATGAAACGTATGAGGGATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 72 bp | TGTCGAGTGTTGAGCTGGCCACCATGGGAGAGTGTCTaGCGTTGTGCGGATTTATGTAGTTGTAGAGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRVLSWPPWESV*RCADLCSCRDP Trigger: AGGATCTCTACAACTACATAAATCCGCACAACGGCAGACACTCTCCCATGGTGGCCAGCTCAACACTCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | TCCGTCTGGGACTCAATGATGGCATACCAAAGCTGCTaGGCTTTTACAACTTTTCGGACACGACCCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVWDSMMAYQSC*AFTTFRTRPCF Trigger: GAAGCAGGGTCGTGTCCGAAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCCCAGACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | GCATGTATGGGGTACCGGTCTCCGTCTGGGACTCAATaGTGGCATACCAAAGCTGCTGAGCTTTTACAACTT | + |
|
Preference number: 6 (lower is better) Translates to: ACMGYRSPSGTQ*WHTKAAELLQL Trigger: AAGTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCCCAGACGGAGACCGGTACCCCATACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | GGGCTTCTGGGCTCTCAAAGGGGTATCTCATCAGGATaGAAGCATCTGCTAAACCTTGTACCCCAATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLLGSQRGISSG*KHLLNLVPQFQ Trigger: TTGGAATTGGGGTACAAGGTTTAGCAGATGCTTTCATCCTGATGAGATACCCCTTTGAGAGCCCAGAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 72 bp | GAGATCTGGGATCCAAAGTGCAAAGAAGAGATCGCGTaGTCGCTGTTCTTCCTTGCCTGTGTTCTTCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: EIWDPKCKEEIA*SLFFLACVLLQ Trigger: TTGAAGAAGAACACAGGCAAGGAAGAACAGCGAGCACGCGATCTCTTCTTTGCACTTTGGATCCCAGATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CAA 90 bp | GGGATCCAAAGTGCAAAGAAGAGATCGCGTGCTCGCTGTTCTTCCTaGCCTGTGTTCTTCTTCAAGTCAAGGAACTCAAAGATGTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GIQSAKKRSRARCSS*PVFFFKSRNSKMSK Trigger: CTTAGACATCTTTGAGTTCCTTGACTTGAAGAAGAACACAGGCAAGGAAGAACAGCGAGCACGCGATCTCTTCTTTGCACTTTGGATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | TGTACTCTACTATTTCTGTACACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCTGGTTGCTCTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: CTLLFLYTGCCI*WFPGSAGCSSG Trigger: ACCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 72 bp | GTGCAAAGAAGAGATCGCGTGCTCGCTGTTCTTCCTTaGCTGTGTTCTTCTTCAAGTCAAGGAACTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VQRRDRVLAVLP*LCSSSSQGTQR Trigger: TCTTTGAGTTCCTTGACTTGAAGAAGAACACAGGCAAGGAAGAACAGCGAGCACGCGATCTCTTCTTTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 72 bp | TCTGCTAAACCTTGTACCCCAATTCCAATGGGCCGATaGCGTTTATTTGATAAGTGTGCCTCTGGAATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAKPCTPIPMGR*RLFDKCASGIG Trigger: CCCTATTCCAGAGGCACACTTATCAAATAAACGCCATCGGCCCATTGGAATTGGGGTACAAGGTTTAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CAA 72 bp | GTAAATAGCAAACGCGCCTGGGCGCTTGTTTCCACCTaGATCCACATAGCGAGCTGTGTTGTTATATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VNSKRAWALVST*IHIASCVVIYS Trigger: AGAGTATATAACAACACAGCTCGCTATGTGGATCAAGGTGGAAACAAGCGCCCAGGCGCGTTTGCTATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CAA 72 bp | AGTGCAAAGAAGAGATCGCGTGCTCGCTGTTCTTCCTaGCCTGTGTTCTTCTTCAAGTCAAGGAACTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAKKRSRARCSS*PVFFFKSRNSK Trigger: CTTTGAGTTCCTTGACTTGAAGAAGAACACAGGCAAGGAAGAACAGCGAGCACGCGATCTCTTCTTTGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CAA 90 bp | CTTGAGAACAGTCTTCTGAGAGATTTCCCACACGGTCTTATAGAGTaGCTTCAGGTCATCAGGAATTTCTGGTATGCTCTGAATGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LENSLLRDFPHGLIE*LQVIRNFWYALNGA Trigger: GGCTCCATTCAGAGCATACCAGAAATTCCTGATGACCTGAAGCAACTCTATAAGACCGTGTGGGAAATCTCTCAGAAGACTGTTCTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | CAACATTCCACATGTCATACTGAAGAATACCCTTGCTaGCTGGAGATCCCTCATACGTTTCATAGGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QHSTCHTEEYPC*LEIPHTFHRGH Trigger: ATGGCCCCTATGAAACGTATGAGGGATCTCCAGTCAGCAAGGGTATTCTTCAGTATGACATGTGGAATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 72 bp | CACATAGCGAGCTGTGTTGTTATATACTCTCAGCATTaGCACAAGGCCATTAGAATTGCCATTAGTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HIASCVVIYSQH*HKAIRIAISPS Trigger: GCTGGGACTAATGGCAATTCTAATGGCCTTGTGCCAATGCTGAGAGTATATAACAACACAGCTCGCTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 72 bp | ATTCCACATGTCATACTGAAGAATACCCTTGCTGACTaGAGATCCCTCATACGTTTCATAGGGGCCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: IPHVILKNTLAD*RSLIRFIGAIL Trigger: GAGTATGGCCCCTATGAAACGTATGAGGGATCTCCAGTCAGCAAGGGTATTCTTCAGTATGACATGTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CAA 72 bp | AGTCTTCTGAGAGATTTCCCACACGGTCTTATAGAGTaGCTTCAGGTCATCAGGAATTTCTGGTATGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLRDFPHGLIE*LQVIRNFWYAL Trigger: CAGAGCATACCAGAAATTCCTGATGACCTGAAGCAACTCTATAAGACCGTGTGGGAAATCTCTCAGAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 72 bp | GTGAATCCCCACAGAAACCCTCATCAACATATGCTGTaGTCTTTCAGCCACTTTACCATTGATCTTCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: VNPHRNPHQHML*SFSHFTIDLQQ Trigger: TTGTTGAAGATCAATGGTAAAGTGGCTGAAAGACCACAGCATATGTTGATGAGGGTTTCTGTGGGGATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS CCA 72 bp | GAGAAGCCAAGTTACAAACTGCAACCTCATCTTTACTaGTGTACTCTACTATTTCTGTACACAGGTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EKPSYKLQPHLY*CTLLFLYTGCC Trigger: GCAGCAACCTGTGTACAGAAATAGTAGAGTACACCAGTAAAGATGAGGTTGCAGTTTGTAACTTGGCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | GTCCATGTTGAGTCCATAACAGAGTTTCTGGATTCGTaGTGTAATTTTGTCAAACATAACTCGCTCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VHVESITEFLDS*CNFVKHNSLLA Trigger: CGCCAAGAGCGAGTTATGTTTGACAAAATTACATCACGAATCCAGAAACTCTGTTATGGACTCAACATGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS GCA 72 bp | TTTATTCAGATTTCGGACAATGACTTTAGTGACTTCTaGCAGTTTCTCAAAGTCATACGTATGTTCCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FIQISDNDFSDF*QFLKVIRMFRC Trigger: ACACCGGAACATACGTATGACTTTGAGAAACTGGCAGAAGTCACTAAAGTCATTGTCCGAAATCTGAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||
| CDS TCA 72 bp | TCTTTCAGCCACTTTACCATTGATCTTCAACAAATATaGCCGTTCCAGTGTCTTAAAGCCAAAGTAGTTATA | + |
|
Preference number: 6 (lower is better) Translates to: SFSHFTIDLQQI*PFQCLKAKVVI Trigger: TATAACTACTTTGGCTTTAAGACACTGGAACGGTCATATTTGTTGAAGATCAATGGTAAAGTGGCTGAAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033283.10 |
||