Pregenerated sensors for RRAGD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028278Ensembl transcript IDs: ENSMUST00000029946.14, ENSMUST00000084747.6, ENSMUST00000098190.10
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATCAACACACCATTCCCAGGAGGTGAACACACACAAGCACACGTaGATCTCTTATCTGAGTGACCTCTGCCTACATCTGGGAACCCTC | + |
|
Preference number: 1 (lower is better) Translates to: ASTHHSQEVNTHKHT*ISYLSDLCLHLGTL Trigger: GAGGGTTCCCAGATGTAGGCAGAGGTCACTCAGATAAGAGATGCACGTGTGCTTGTGTGTGTTCACCTCCTGGGAATGGTGTGTTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 90 bp | CGGTGTTGCATTCCTATAATCCTAGCACTTAGGGAAAGTCGAGGCTaGGCGGTCAGAAACTGGAGAGCATCCTTAGCTACCTGGCAAGTC | + |
|
Preference number: 1 (lower is better) Translates to: RCCIPIILALRESRG*AVRNWRASLATWQV Trigger: GACTTGCCAGGTAGCTAAGGATGCTCTCCAGTTTCTGACCGCTCAGCCTCGACTTTCCCTAAGTGCTAGGATTATAGGAATGCAACACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 90 bp | CCAAGGACTAAACTCCTGTGGTCATGGAGCATTAAAACCTGGTCCTaGACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: PRTKLLWSWSIKTWS*TRSLNIAHQHTIPR Trigger: CCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGACCAGGTTTTAATGCTCCATGACCACAGGAGTTTAGTCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 90 bp | ATAAATAGAGACGTTCTTATTGCTCTGGCCTGGAGCTTCCAGCCCTaGCCTGTTGCTGCTCCACTGAAAAACGATTTCCCCTTTGACAAC | + |
|
Preference number: 1 (lower is better) Translates to: INRDVLIALAWSFQP*PVAAPLKNDFPFDN Trigger: GTTGTCAAAGGGGAAATCGTTTTTCAGTGGAGCAGCAACAGGTCAGGGCTGGAAGCTCCAGGCCAGAGCAATAAGAACGTCTCTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 90 bp | TGTCACACCAGGCTCGAGGCAGGAATCAGTGTTGTAACTAAAGAGTaGATTTATGATCAGGAACATGGGCCCTATGTCACAGGAGTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: CHTRLEAGISVVTKE*IYDQEHGPYVTGVF Trigger: GAACACTCCTGTGACATAGGGCCCATGTTCCTGATCATAAATGCACTCTTTAGTTACAACACTGATTCCTGCCTCGAGCCTGGTGTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 90 bp | CAAAAAGAAATCACCCGTCTGCACAAGGTGACTGCAAAGGTGTGTTaGGGTAAAGAGTTTCATAAAGACTGGGCGAGTCGGAAGGCAATG | + |
|
Preference number: 1 (lower is better) Translates to: QKEITRLHKVTAKVC*GKEFHKDWASRKAM Trigger: CATTGCCTTCCGACTCGCCCAGTCTTTATGAAACTCTTTACCTCAACACACCTTTGCAGTCACCTTGTGCAGACGGGTGATTTCTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 90 bp | GCTGACCTCAAACTCACAGAGATCCATCTGCTGGGATTAAAGGCATaGACCACCACTGTCCAGCTACAACATTCCTATTACACTTCCTAT | + |
|
Preference number: 1 (lower is better) Translates to: ADLKLTEIHLLGLKA*TTTVQLQHSYYTSY Trigger: ATAGGAAGTGTAATAGGAATGTTGTAGCTGGACAGTGGTGGTGCATGCCTTTAATCCCAGCAGATGGATCTCTGTGAGTTTGAGGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 90 bp | GCATTTATGATCAGGAACATGGGCCCTATGTCACAGGAGTGTTCCTaGCTATCCCTCAAAGAATCACATGCTCTTGAAGTGATAGGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: AFMIRNMGPMSQECS*LSLKESHALEVIGF Trigger: AAAGCCTATCACTTCAAGAGCATGTGATTCTTTGAGGGATAGGCAGGAACACTCCTGTGACATAGGGCCCATGTTCCTGATCATAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 90 bp | TTCACAAGATACTGCACCAAAAAGAAATCACCCGTCTGCACAAGGTaGCTGCAAAGGTGTGTTGAGGTAAAGAGTTTCATAAAGACTGGG | + |
|
Preference number: 1 (lower is better) Translates to: FTRYCTKKKSPVCTR*LQRCVEVKSFIKTG Trigger: CCCAGTCTTTATGAAACTCTTTACCTCAACACACCTTTGCAGTCACCTTGTGCAGACGGGTGATTTCTTTTTGGTGCAGTATCTTGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 90 bp | GACTGTGTTACAAATGAAGTCCTAGCAACAGCAAAACAGTGTGCTTaGTTACAAACTACACCCAGCCTGTGTTTGTTGAGTGCATACCAT | + |
|
Preference number: 1 (lower is better) Translates to: DCVTNEVLATAKQCA*LQTTPSLCLLSAYH Trigger: ATGGTATGCACTCAACAAACACAGGCTGGGTGTAGTTTGTAATCAAGCACACTGTTTTGCTGTTGCTAGGACTTCATTTGTAACACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CCA 90 bp | CTGTTCCAATCTCCTCAGACGACATCCATATTTCTCTACACTGGTTaGCATCATTTTAGAAATCTGGTCCCAAAGGTTCACAAGATACTG | + |
|
Preference number: 1 (lower is better) Translates to: LFQSPQTTSIFLYTG*HHFRNLVPKVHKIL Trigger: CAGTATCTTGTGAACCTTTGGGACCAGATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAGATTGGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 90 bp | GTCACAGGAGTGTTCCTGCCTATCCCTCAAAGAATCACATGCTCTTaGAGTGATAGGCTTTTAAGGCACATTTCAACAACAAAAACTCAT | + |
|
Preference number: 1 (lower is better) Translates to: VTGVFLPIPQRITCS*SDRLLRHISTTKTH Trigger: ATGAGTTTTTGTTGTTGAAATGTGCCTTAAAAGCCTATCACTTCAAGAGCATGTGATTCTTTGAGGGATAGGCAGGAACACTCCTGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 90 bp | CAATATAATGGATCAATTTCCGATTGCCATATGGACTGTAGAGTATaGGTGTCCTTGTCATCAAGTACAGAAAAGAGTTTAGAAAAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: QYNGSISDCHMDCRV*VSLSSSTEKSLEKS Trigger: TGACTTTTCTAAACTCTTTTCTGTACTTGATGACAAGGACACGCATACTCTACAGTCCATATGGCAATCGGAAATTGATCCATTATATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGAACCCTCTTGGCTTGTGTGTTTTAGACCCCTCGGCAGGTACAGTATTGCTTTGGAGCTTCCAGCCCTaGCCTGTTGCTGCTCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: GNPLGLCVLDPSAGTVLLWSFQP*PVAAPL Trigger: CAGTGGAGCAGCAACAGGTCAGGGCTGGAAGCTCCA...AAGCAATACTGTACCTGCCGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGAGTCTGAGGCCAGCCTaGGTTACCTCTGAGCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: CLHMHKALGPVLSTVQAKSLRPA*VTSEPH Trigger: GTGGGGCTCAGAGGTAACTCAGGCTGGCCTCAGACT...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTAGTCTGAGGCCAGCCTaGGTTACCTCTGAGCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: IQTSSRGQCHTRLEAGISSLRPA*VTSEPH Trigger: GTGGGGCTCAGAGGTAACTCAGGCTGGCCTCAGACT...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGCCCGTCTGCACAAGGTaGCTGCAAAGGTGTGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLNKVSEHSASTHHSQEVPVCTR*LQRCVE Trigger: CTCAACACACCTTTGCAGTCACCTTGTGCAGACGGG...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGCATCTCTTATCTGAGTaGCCTCTGCCTACATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLNKVSEHSASTHHSQEVHLLSE*PLPTSG Trigger: CCCAGATGTAGGCAGAGGTCACTCAGATAAGAGATG...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTACCATTCCCAGGAGGTaGACACACACAAGCACACGT | + |
|
Preference number: 2 (lower is better) Translates to: IQTSSRGQCHTRLEAGISTIPRR*THTSTR Trigger: ACGTGTGCTTGTGTGTGTTCACCTCCTGGGAATGGT...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGCTGGGATTAAAGGCATaGACCACCACTGTCCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VLNKVSEHSASTHHSQEVLGLKA*TTTVQL Trigger: TAGCTGGACAGTGGTGGTGCATGCCTTTAATCCCAG...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGGCCCTGACCTGTTGCTaGTCCACTGAAAAACGATTT | + |
|
Preference number: 2 (lower is better) Translates to: CLHMHKALGPVLSTVQAKALTCC*STEKRF Trigger: AAATCGTTTTTCAGTGGAGCAGCAACAGGTCAGGGC...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACAACGTTCTTATTGCTCTaGCCTGGAGCTTCCAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: NKVSEHSASTHHSQEVNTTFLLL*PGASSP Trigger: AGGGCTGGAAGCTCCAGGCCAGAGCAATAAGAACGT...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGAAACGATTTCCCCTTTaGCAACTGGCAGCAAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: CLHMHKALGPVLSTVQAKKRFPL*QLAAKS Trigger: ACTCTTTGCTGCCAGTTGTCAAAGGGGAAATCGTTT...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTCTGTTGCTGCTCCACTaGAAAACGATTTCCCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: IQTSSRGQCHTRLEAGISLLLLH*KTISPL Trigger: CAAAGGGGAAATCGTTTTTCAGTGGAGCAGCAACAG...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACACTGGGATTAAAGGCATaGACCACCACTGTCCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: NKVSEHSASTHHSQEVNTLGLKA*TTTVQL Trigger: TAGCTGGACAGTGGTGGTGCATGCCTTTAATCCCAG...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACATATCTGAGTGACCTCTaGCTACATCTGGGAACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NKVSEHSASTHHSQEVNTYLSDL*LHLGTL Trigger: GAGGGTTCCCAGATGTAGGCAGAGGTCACTCAGATA...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTAGCCAAGCACGGTGTTaGATTCCTATAATCCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SDIFKRSVSHQARGRNQCSQARC*IPIILA Trigger: TGCTAGGATTATAGGAATGCAACACCGTGCTTGGCT...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGTTCCCCTTTGACAACTaGCAGCAAAGAGTCCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: CLHMHKALGPVLSTVQAKFPFDN*QQRVPN Trigger: ATTTGGGACTCTTTGCTGCCAGTTGTCAAAGGGGAA...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTATCTGGGAACCCTCTTaGCTTGTGTGTTTTAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: IQTSSRGQCHTRLEAGISIWEPS*LVCFRP Trigger: GGGTCTAAAACACACAAGCCAAGAGGGTTCCCAGAT...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCTGCAGAGCAAGCTGGTaGCAAGCTGATCTTGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: YTQPVFVECIPYVNHDSSCRASW*QADLGR Trigger: CCTACCAAGATCAGCTTGCCACCAGCTTGCTCTGCA...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCCATCTCTTATCTGAGTaGCCTCTGCCTACATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: YTQPVFVECIPYVNHDSSHLLSE*PLPTSG Trigger: CCCAGATGTAGGCAGAGGTCACTCAGATAAGAGATG...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGCCCCACACAAATCAATaGTATCTGTTCCAATCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLHMHKALGPVLSTVQAKPHTNQ*YLFQSP Trigger: AGGAGATTGGAACAGATAGCATTGATTTGTGTGGGG...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGACAGCCAGGGCTACATAGAGATACGCTGTCTCAAATAATAAAGAATTTGCTCCTCACTGAGGTCTaGACTCAGGCTCCTGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: PGQPGLHRDTLSQIIKNLLLTEV*TQAPDS Trigger: ACTGTCAGGAGCCTGAGTCCAGACCTCAGTGAGGAG...CAAATTCTTTATTATTTGAGACAGCGTATCTCTATGTAGCCCTGGCTGTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGAGGACTAAACTCCTGTaGTCATGGAGCATTAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: CLHMHKALGPVLSTVQAKRTKLL*SWSIKT Trigger: GGTTTTAATGCTCCATGACCACAGGAGTTTAGTCCT...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 90 bp | GGTACGGGGTACGTCAAGCCATCGGCACACAAACATGCTTTCAAGTaGGCAGTTAACATCCCTGAAGACTGTGTTACAAATGAAGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: GTGYVKPSAHKHAFK*AVNIPEDCVTNEVL Trigger: TAGGACTTCATTTGTAACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGATGGCTTGACGTACCCCGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCCCCGTCTGCACAAGGTaGCTGCAAAGGTGTGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLRRHPYFSTLVGIILEIPVCTR*LQRCVE Trigger: CTCAACACACCTTTGCAGTCACCTTGTGCAGACGGG...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGACAGCCAGGGCTACATAGAGATACGCTGTCTCAAATAATAAAGAATTTGACCATTCCCAGGAGGTaGACACACACAAGCACACGT | + |
|
Preference number: 2 (lower is better) Translates to: PGQPGLHRDTLSQIIKNLTIPRR*THTSTR Trigger: ACGTGTGCTTGTGTGTGTTCACCTCCTGGGAATGGT...CAAATTCTTTATTATTTGAGACAGCGTATCTCTATGTAGCCCTGGCTGTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGGGATCAATTTCCGATTaGCATATGGACTGTAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VLNKVSEHSASTHHSQEVGSISD*HMDCRV Trigger: TACTCTACAGTCCATATGGCAATCGGAAATTGATCC...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGAACCCTCTTGGCTTGTGTGTTTTAGACCCCTCGGCAGGTACAGTATTGCTTGGATCAATTTCCGATTaGCATATGGACTGTAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GNPLGLCVLDPSAGTVLLGSISD*HMDCRV Trigger: TACTCTACAGTCCATATGGCAATCGGAAATTGATCC...AAGCAATACTGTACCTGCCGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTGGATCAATTTCCGATTaGCATATGGACTGTAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SDIFKRSVSHQARGRNQCGSISD*HMDCRV Trigger: TACTCTACAGTCCATATGGCAATCGGAAATTGATCC...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GGGAACCCTCTTGGCTTGTGTGTTTTAGACCCCTCGGCAGGTACAGTATTGCTTAGGTTCACAAGATACTaGACCAAAAAGAAATCACCC | + |
|
Preference number: 2 (lower is better) Translates to: GNPLGLCVLDPSAGTVLLRFTRY*TKKKSP Trigger: GGGTGATTTCTTTTTGGTGCAGTATCTTGTGAACCT...AAGCAATACTGTACCTGCCGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACCTCCTCACTGAGGTCTaGACTCAGGCTCCTGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNLLTEV*TQAPDS Trigger: ACTGTCAGGAGCCTGAGTCCAGACCTCAGTGAGGAG...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 90 bp | AAACTATTAAGAAAGGATGCTGGGGATACTAGATTGGTAGAGTGCTaGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: KLLRKDAGDTRLVEC*PSHAQSSGSSSQHC Trigger: ACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCAAGCACTCTACCAATCTAGTATCCCCAGCATCCTTTCTTAATAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTGGAAGCAGAGGCAGGTaGATCTCTGAGTTCAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SQFLKPNTCSTEATVVRSGSRGR*ISEFKD Trigger: GTCCTTGAACTCAGAGATTCACCTGCCTCTGCTTCC...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCACACACAAGCACACGTaGATCTCTTATCTGAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: YTQPVFVECIPYVNHDSSTHKHT*ISYLSD Trigger: GTCACTCAGATAAGAGATGCACGTGTGCTTGTGTGT...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGACAGCCAGGGCTACATAGAGATACGCTGTCTCAAATAATAAAGAATTTGCTGTGTCTTCTGTCTTaGAGAGCAAGCTGGTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PGQPGLHRDTLSQIIKNLLCLLS*RASWWQ Trigger: TTGCCACCAGCTTGCTCTGCAAGACAGAAGACACAG...CAAATTCTTTATTATTTGAGACAGCGTATCTCTATGTAGCCCTGGCTGTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACGTGCTTGCCTTCACATaGACAAAGCTCTGGGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNVLAFT*TKLWVQ Trigger: CTGGACCCAGAGCTTTGTGCATGTGAAGGCAAGCAC...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCACGTTCTTATTGCTCTaGCCTGGAGCTTCCAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLRRHPYFSTLVGIILEITFLLL*PGASSP Trigger: AGGGCTGGAAGCTCCAGGCCAGAGCAATAAGAACGT...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTCAAAAGTGTAAGACCTaGCCAGACATGGTGGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVQKCKT*PDMVVF Trigger: GAACACCACCATGTCTGGCCAGGTCTTACACTTTTG...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACCATCTCTTATCTGAGTaGCCTCTGCCTACATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNHLLSE*PLPTSG Trigger: CCCAGATGTAGGCAGAGGTCACTCAGATAAGAGATG...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACCTGGGATTAAAGGCATaGACCACCACTGTCCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNLGLKA*TTTVQL Trigger: TAGCTGGACAGTGGTGGTGCATGCCTTTAATCCCAG...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGATCATTTTAGAAATCTaGTCCCAAAGGTTCACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CLHMHKALGPVLSTVQAKIILEI*SQRFTR Trigger: TCTTGTGAACCTTTGGGACCAGATTTCTAAAATGAT...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACCCTCTTGGCTTGTGTGTTTTAGACCCCTCGGCAGGTACAGTATTGCTTTTTCTCTACACTGGTTaGCATCATTTTAGAAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: GNPLGLCVLDPSAGTVLLFLYTG*HHFRNL Trigger: CAGATTTCTAAAATGATGCCAACCAGTGTAGAGAAA...AAGCAATACTGTACCTGCCGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTTCTTGCAGAGCAAGCTaGTGGCAAGCTGATCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SQFLKPNTCSTEATVVRSSCRAS*WQADLG Trigger: ACCAAGATCAGCTTGCCACCAGCTTGCTCTGCAAGA...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACTCTTGCAGAGCAAGCTaGTGGCAAGCTGATCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNSCRAS*WQADLG Trigger: ACCAAGATCAGCTTGCCACCAGCTTGCTCTGCAAGA...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAACCCGTCTGCACAAGGTaGCTGCAAAGGTGTGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKPVCTR*LQRCVE Trigger: CTCAACACACCTTTGCAGTCACCTTGTGCAGACGGG...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACGCCCTGACCTGTTGCTaGTCCACTGAAAAACGATTT | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNALTCC*STEKRF Trigger: AAATCGTTTTTCAGTGGAGCAGCAACAGGTCAGGGC...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTATCTCCTTAATAATGTaGAGACTACTGGGAGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVISLIM*RLLGGS Trigger: TGAGCCTCCCAGTAGTCTGCACATTATTAAGGAGAT...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTACTAGATTGGTAGAGTaGTTGCCTTCACATGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVTRLVE*LPSHAQ Trigger: TTGTGCATGTGAAGGCAAGCACTCTACCAATCTAGT...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAACTCCTCACTGAGGTCTaGACTCAGGCTCCTGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKLLTEV*TQAPDS Trigger: ACTGTCAGGAGCCTGAGTCCAGACCTCAGTGAGGAG...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTATCATTTTAGAAATCTaGTCCCAAAGGTTCACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IQTSSRGQCHTRLEAGISIILEI*SQRFTR Trigger: TCTTGTGAACCTTTGGGACCAGATTTCTAAAATGAT...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACAAACGATTTCCCCTTTaGCAACTGGCAGCAAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNKRFPL*QLAAKS Trigger: ACTCTTTGCTGCCAGTTGTCAAAGGGGAAATCGTTT...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCAAACGATTTCCCCTTTaGCAACTGGCAGCAAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLRRHPYFSTLVGIILEIKRFPL*QLAAKS Trigger: ACTCTTTGCTGCCAGTTGTCAAAGGGGAAATCGTTT...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCCATGCTAATTTTATGTaGTTTACCAGACAGGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: YTQPVFVECIPYVNHDSSHANFM*FTRQAS Trigger: ACTTGCCTGTCTGGTAAATCACATAAAATTAGCATG...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTAGAATCACATGCTCTTaGAGTGATAGGCTTTTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVRITCS*SDRLLR Trigger: CCTTAAAAGCCTATCACTTCAAGAGCATGTGATTCT...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTACACACAAGCACACGTaGATCTCTTATCTGAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SQFLKPNTCSTEATVVRSTHKHT*ISYLSD Trigger: GTCACTCAGATAAGAGATGCACGTGTGCTTGTGTGT...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACAGCCAAGCACGGTGTTaGATTCCTATAATCCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNSQARC*IPIILA Trigger: TGCTAGGATTATAGGAATGCAACACCGTGCTTGGCT...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTTTCCCCTTTGACAACTaGCAGCAAAGAGTCCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SQFLKPNTCSTEATVVRSFPFDN*QQRVPN Trigger: ATTTGGGACTCTTTGCTGCCAGTTGTCAAAGGGGAA...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAAACGTTCTTATTGCTCTaGCCTGGAGCTTCCAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKTFLLL*PGASSP Trigger: AGGGCTGGAAGCTCCAGGCCAGAGCAATAAGAACGT...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTACTAGATTGGTAGAGTaGTTGCCTTCACATGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: SQFLKPNTCSTEATVVRSTRLVE*LPSHAQ Trigger: TTGTGCATGTGAAGGCAAGCACTCTACCAATCTAGT...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 90 bp | CTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTTaGACCTTTCAGTTTATAGTCCCATTTGAGCATAGACACAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: LKPNTCSTEATVVRS*TFQFIVPFEHRHRS Trigger: AGATCTGTGTCTATGCTCAAATGGGACTATAAACTGAAAGGTCAAACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTACACACATAGTTAACTaGCTAACATACGTCTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SQFLKPNTCSTEATVVRSTHIVN*LTYVSR Trigger: CCTAGAGACGTATGTTAGTCAGTTAACTATGTGTGT...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAAATCTGGGAACCCTCTTaGCTTGTGTGTTTTAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKIWEPS*LVCFRP Trigger: GGGTCTAAAACACACAAGCCAAGAGGGTTCCCAGAT...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 90 bp | GGATCAATTTCCGATTGCCATATGGACTGTAGAGTATGCGTGTCCTaGTCATCAAGTACAGAAAAGAGTTTAGAAAAGTCATCTTATCAA | + |
|
Preference number: 2 (lower is better) Translates to: GSISDCHMDCRVCVS*SSSTEKSLEKSSYQ Trigger: TTGATAAGATGACTTTTCTAAACTCTTTTCTGTACTTGATGACAAGGACACGCATACTCTACAGTCCATATGGCAATCGGAAATTGATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAACCCCACACAAATCAATaGTATCTGTTCCAATCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKPHTNQ*YLFQSP Trigger: AGGAGATTGGAACAGATAGCATTGATTTGTGTGGGG...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACTTTCTCTACACTGGTTaGCATCATTTTAGAAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNFLYTG*HHFRNL Trigger: CAGATTTCTAAAATGATGCCAACCAGTGTAGAGAAA...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAATTTCTCTACACTGGTTaGCATCATTTTAGAAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKFLYTG*HHFRNL Trigger: CAGATTTCTAAAATGATGCCAACCAGTGTAGAGAAA...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTGGGAACCCTCTTGGCTaGTGTGTTTTAGACCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SDIFKRSVSHQARGRNQCGNPLG*CVLDPS Trigger: CGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CCA 72 bp | ACCAGCTCCAAAAGTGTAAGACCTGGCCAGACATGGTaGTGTTCACCTTTGATCACTTGGGGAAGCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSSKSVRPGQTW*CSPLITWGSRG Trigger: GCCTCTGCTTCCCCAAGTGATCAAAGGTGAACACCACCATGTCTGGCCAGGTCTTACACTTTTGGAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTTCTGTGTCTTCTGTCTaGCAGAGCAAGCTGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IQTSSRGQCHTRLEAGISSVSSV*QSKLVA Trigger: TGCCACCAGCTTGCTCTGCAAGACAGAAGACACAGA...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTTGGTGGTGTTCACCTTaGATCACTTGGGGAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SDIFKRSVSHQARGRNQCWWCSP*ITWGSR Trigger: TCTGCTTCCCCAAGTGATCAAAGGTGAACACCACCA...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CCA 72 bp | ATTGGTAGAGTGCTTGCCTTCACATGCACAAAGCTCTaGGTCCAGTTCTCAGCACTGTTCAAGCCAAGCACG | + |
|
Preference number: 3 (lower is better) Translates to: IGRVLAFTCTKL*VQFSALFKPST Trigger: CGTGCTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCAAGCACTCTACCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTATAGAGACGTTCTTATaGCTCTGGCCTGGAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IQTSSRGQCHTRLEAGISIETFL*LWPGAS Trigger: GGAAGCTCCAGGCCAGAGCAATAAGAACGTCTCTAT...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGAAGCTAGAACCAGCTTaGACATCCCTAAGGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLHMHKALGPVLSTVQAKKLEPA*TSLRDS Trigger: AGAGTCCCTTAGGGATGTCAAAGCTGGTTCTAGCTT...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTAAGCCAAGCACGGTGTaGCATTCCTATAATCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SDIFKRSVSHQARGRNQCKPSTV*HSYNPS Trigger: GCTAGGATTATAGGAATGCAACACCGTGCTTGGCTT...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 72 bp | CACAAGCACACGTGCATCTCTTATCTGAGTGACCTCTaGCTACATCTGGGAACCCTCTTGGCTTGTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HKHTCISYLSDL*LHLGTLLACVF Trigger: AAACACACAAGCCAAGAGGGTTCCCAGATGTAGGCAGAGGTCACTCAGATAAGAGATGCACGTGTGCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CCA 72 bp | AACAAGAGACCATTCTGCTCCCAGAAAACTAAGCTATaGGTACGGGGTACGTCAAGCCATCGGCACACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NKRPFCSQKTKL*VRGTSSHRHTN Trigger: GTTTGTGTGCCGATGGCTTGACGTACCCCGTACCCATAGCTTAGTTTTCTGGGAGCAGAATGGTCTCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 72 bp | TGTTCACCTTTGATCACTTGGGGAAGCAGAGGCAGGTaGATCTCTGAGTTCAAGGACAGTCCGGTCTACATA | + |
|
Preference number: 3 (lower is better) Translates to: CSPLITWGSRGR*ISEFKDSPVYI Trigger: TATGTAGACCGGACTGTCCTTGAACTCAGAGATTCACCTGCCTCTGCTTCCCCAAGTGATCAAAGGTGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 72 bp | ATTCCTATAATCCTAGCACTTAGGGAAAGTCGAGGCTaGGCGGTCAGAAACTGGAGAGCATCCTTAGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: IPIILALRESRG*AVRNWRASLAT Trigger: GGTAGCTAAGGATGCTCTCCAGTTTCTGACCGCTCAGCCTCGACTTTCCCTAAGTGCTAGGATTATAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTAGAGTATGCGTGTCCTaGTCATCAAGTACAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SDIFKRSVSHQARGRNQCRVCVS*SSSTEK Trigger: CTTTTCTGTACTTGATGACAAGGACACGCATACTCT...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTTTCACCTTTGATCACTaGGGGAAGCAGAGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVFTFDH*GKQRQV Trigger: CACCTGCCTCTGCTTCCCCAAGTGATCAAAGGTGAA...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCTGGTGGTGTTCACCTTaGATCACTTGGGGAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YTQPVFVECIPYVNHDSSWWCSP*ITWGSR Trigger: TCTGCTTCCCCAAGTGATCAAAGGTGAACACCACCA...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTTGGCTCTCACTGTTATaGTACAGGTTTTTGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SDIFKRSVSHQARGRNQCWLSLL*YRFLLQ Trigger: TTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCA...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 72 bp | TCCAGTTCTCAGCACTGTTCAAGCCAAGCACGGTGTTaGATTCCTATAATCCTAGCACTTAGGGAAAGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: SSSQHCSSQARC*IPIILALRESR Trigger: TCGACTTTCCCTAAGTGCTAGGATTATAGGAATGCAACACCGTGCTTGGCTTGAACAGTGCTGAGAACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 72 bp | TTAAGAAAGGATGCTGGGGATACTAGATTGGTAGAGTaGTTGCCTTCACATGCACAAAGCTCTGGGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LRKDAGDTRLVE*LPSHAQSSGSS Trigger: ACTGGACCCAGAGCTTTGTGCATGTGAAGGCAAGCACTCTACCAATCTAGTATCCCCAGCATCCTTTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTTGGCTCTCACTGTTATaGTACAGGTTTTTGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IQTSSRGQCHTRLEAGISWLSLL*YRFLLQ Trigger: TTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCA...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACAAGAGTATGCGTGTCCTaGTCATCAAGTACAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NKVSEHSASTHHSQEVNTRVCVS*SSSTEK Trigger: CTTTTCTGTACTTGATGACAAGGACACGCATACTCT...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTGGTGGCAAGCTGATCTaGGTAGGAACAGGCAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SQFLKPNTCSTEATVVRSGGKLI*VGTGKG Trigger: TCCTTTGCCTGTTCCTACCAAGATCAGCTTGCCACC...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTAAGCTAGAACCAGCTTaGACATCCCTAAGGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVKLEPA*TSLRDS Trigger: AGAGTCCCTTAGGGATGTCAAAGCTGGTTCTAGCTT...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CCA 72 bp | TCCAGTTTTAGTTACCAGCTCCAAAAGTGTAAGACCTaGCCAGACATGGTGGTGTTCACCTTTGATCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSFSYQLQKCKT*PDMVVFTFDHL Trigger: CAAGTGATCAAAGGTGAACACCACCATGTCTGGCCAGGTCTTACACTTTTGGAGCTGGTAACTAAAACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCATAGAGACGTTCTTATaGCTCTGGCCTGGAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLRRHPYFSTLVGIILEIIETFL*LWPGAS Trigger: GGAAGCTCCAGGCCAGAGCAATAAGAACGTCTCTAT...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTATAGAGACGTTCTTATaGCTCTGGCCTGGAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQFLKPNTCSTEATVVRSIETFL*LWPGAS Trigger: GGAAGCTCCAGGCCAGAGCAATAAGAACGTCTCTAT...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAAGGGAACCCTCTTGGCTaGTGTGTTTTAGACCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKGNPLG*CVLDPS Trigger: CGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 72 bp | ACCTGTTGCTGCTCCACTGAAAAACGATTTCCCCTTTaGCAACTGGCAGCAAAGAGTCCCAAATTTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TCCCSTEKRFPL*QLAAKSPKFTK Trigger: TTTTGTAAATTTGGGACTCTTTGCTGCCAGTTGTCAAAGGGGAAATCGTTTTTCAGTGGAGCAGCAACAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 72 bp | CATGCACGCCTGACAGTACTAACCCTTAGAATGGTTTaGAATAGGGCTAGATTTAGGACTCTTAGTTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: HARLTVLTLRMV*NRARFRTLSSL Trigger: TAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCATTCTAAGGGTTAGTACTGTCAGGCGTGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 72 bp | AGTAATTCGGCACAACTCTTACATAGAAGCTGTACTTaGCTCAGAGAGCAAAAGTCTGCCTGCTCTACACAT | + |
|
Preference number: 3 (lower is better) Translates to: SNSAQLLHRSCT*LREQKSACSTH Trigger: ATGTGTAGAGCAGGCAGACTTTTGCTCTCTGAGTCAAGTACAGCTTCTATGTAAGAGTTGTGCCGAATTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 72 bp | GTAAACATCATCTTGAATTTCAACAAGAGACCATTCTaGTCCCAGAAAACTAAGCTATGGGTACGGGGTACG | + |
|
Preference number: 3 (lower is better) Translates to: VNIILNFNKRPF*SQKTKLWVRGT Trigger: CGTACCCCGTACCCATAGCTTAGTTTTCTGGGAGCAGAATGGTCTCTTGTTGAAATTCAAGATGATGTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CCA 72 bp | TCTCCTCAGACGACATCCATATTTCTCTACACTGGTTaGCATCATTTTAGAAATCTGGTCCCAAAGGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SPQTTSIFLYTG*HHFRNLVPKVH Trigger: GTGAACCTTTGGGACCAGATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAAGGTGGCAAGCTGATCTaGGTAGGAACAGGCAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKGGKLI*VGTGKG Trigger: TCCTTTGCCTGTTCCTACCAAGATCAGCTTGCCACC...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR TCA 72 bp | GTGTTCCTGCCTATCCCTCAAAGAATCACATGCTCTTaGAGTGATAGGCTTTTAAGGCACATTTCAACAACA | + |
|
Preference number: 3 (lower is better) Translates to: VFLPIPQRITCS*SDRLLRHISTT Trigger: TGTTGTTGAAATGTGCCTTAAAAGCCTATCACTTCAAGAGCATGTGATTCTTTGAGGGATAGGCAGGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR GCA 72 bp | GGATCAATTTCCGATTGCCATATGGACTGTAGAGTATaGGTGTCCTTGTCATCAAGTACAGAAAAGAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GSISDCHMDCRV*VSLSSSTEKSL Trigger: TAAACTCTTTTCTGTACTTGATGACAAGGACACGCATACTCTACAGTCCATATGGCAATCGGAAATTGATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAAAGAGTATGCGTGTCCTaGTCATCAAGTACAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKRVCVS*SSSTEK Trigger: CTTTTCTGTACTTGATGACAAGGACACGCATACTCT...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCCTCCTGTAGTGCAGTATAGTTTAACAGCCTCCTCACTGAGGTCTGGAAGGCCCTGGTCACTGTaGGATGGAGCCGGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSPPVVQYSLTASSLRSGRPWSL*DGAGPA Trigger: CGCTGGCCCGGCTCCATCTCACAGTGACCAGGGCCT...TCCAGACCTCAGTGAGGAGGCTGTTAAACTATACTGCACTACAGGAGGGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTCCGCCGTCCTCACCCTaGGGCTGCGGCTTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQTSSRGQCHTRLEAGISPPSSP*GCGLPS Trigger: GCTGGGCAAGCCGCAGCCGCAGGGTGAGGACGGCGG...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACACCGCCGTCCTCACCCTaGGGCTGCGGCTTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKVSEHSASTHHSQEVNTPPSSP*GCGLPS Trigger: GCTGGGCAAGCCGCAGCCGCAGGGTGAGGACGGCGG...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTGCTCCTCCAGAGGCCTaGTTCCCAGCACTCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDIFKRSVSHQARGRNQCAPPEA*FPALMP Trigger: AGGCATGAGTGCTGGGAACCAGGCCTCTGGAGGAGC...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCCTCCTGTAGTGCAGTATAGTTTAACAGCCTCCTCACTGAGGTCTGGACCCGGCAGATCCTGTTaGTGCTCTCCAAGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSPPVVQYSLTASSLRSGPGRSC*CSPRTA Trigger: CGCTGTTCTTGGAGAGCACCAACAGGATCTGCCGGG...TCCAGACCTCAGTGAGGAGGCTGTTAAACTATACTGCACTACAGGAGGGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTAGGCCCTGGTCACTGTaGGATGGAGCCGGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVRPWSL*DGAGPA Trigger: CGCTGGCCCGGCTCCATCTCACAGTGACCAGGGCCT...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGGATGACGAAGATCAGTaGCCCGGTTCCCCGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLHMHKALGPVLSTVQAKDDEDQ*PGSPED Trigger: ATCTTCCGGGGAACCGGGGCACTGATCTTCGTCATC...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGCAGCGTCGGGAGCTGTaGGATCAGTTTCTGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLHMHKALGPVLSTVQAKQRREL*DQFLNH Trigger: GTGGTTCAGAAACTGATCCCACAGCTCCCGACGCTG...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTGCCTGGTGGCTTCACTaGACCAGCTCCTGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVAWWLH*TSSWAS Trigger: GGATGCCCAGGAGCTGGTGCAGTGAAGCCACCAGGC...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR GCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCGCCATCCACCACCAATaGCCAGCAAGTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTQPVFVECIPYVNHDSSAIHHQ*PASGCS Trigger: GGAGCAGCCACTTGCTGGGCATTGGTGGTGGATGGC...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGGTCCAGAAAGAAATCTaGCTGCCTCTGCCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNKVSEHSASTHHSQEVVQKEI*LPLPPE Trigger: CTCAGGAGGCAGAGGCAGGCAGATTTCTTTCTGGAC...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR CCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCCCCAGCACTCATGCCTaGTGGCTTCACTGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQPVFVECIPYVNHDSSPSTHA*WLHCTS Trigger: GCTGGTGCAGTGAAGCCACCAGGCATGAGTGCTGGG...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR CCA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTCGAAGACTTCATGGATaGCCTTCCGGAAGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDIFKRSVSHQARGRNQCRRLHG*PSGSSG Trigger: TCCACTGCTTCCGGAAGGCCATCCATGAAGTCTTCG...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | GGGAACCCTCTTGGCTTGTGTGTTTTAGACCCCTCGGCAGGTACAGTATTGCTTACCTCGAAGACTTCATaGATGGCCTTCCGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNPLGLCVLDPSAGTVLLTSKTS*MAFRKQ Trigger: CTGCTTCCGGAAGGCCATCCATGAAGTCTTCGAGGT...AAGCAATACTGTACCTGCCGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | AATATAATGGATCAATTTCCGATTGCCATATGGACTGTAGAGTATGCGTGTCCTAGGCCCTGGTCACTGTaGGATGGAGCCGGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NIMDQFPIAIWTVEYACPRPWSL*DGAGPA Trigger: CGCTGGCCCGGCTCCATCTCACAGTGACCAGGGCCT...AGGACACGCATACTCTACAGTCCATATGGCAATCGGAAATTGATCCATTATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGTCGTTTGCCCTCTGGTaGATGTCTCTCTGGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLNKVSEHSASTHHSQEVSFALW*MSLWVS Trigger: TGAAACCCAGAGAGACATTCACCAGAGGGCAAACGA...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | GGGAACCCTCTTGGCTTGTGTGTTTTAGACCCCTCGGCAGGTACAGTATTGCTTTCGTTTGCCCTCTGGTaGATGTCTCTCTGGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNPLGLCVLDPSAGTVLLSFALW*MSLWVS Trigger: TGAAACCCAGAGAGACATTCACCAGAGGGCAAACGA...AAGCAATACTGTACCTGCCGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTGCATGTCCACCGGCGTaGTGTCGGTTGCAATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDIFKRSVSHQARGRNQCACPPA*CRLQYK Trigger: TTTATATTGCAACCGACAGCACGCCGGTGGACATGC...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGGCATGTCCACCGGCGTaGTGTCGGTTGCAATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLHMHKALGPVLSTVQAKACPPA*CRLQYK Trigger: TTTATATTGCAACCGACAGCACGCCGGTGGACATGC...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACACAGCGTCGGGAGCTGTaGGATCAGTTTCTGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKVSEHSASTHHSQEVNTQRREL*DQFLNH Trigger: GTGGTTCAGAAACTGATCCCACAGCTCCCGACGCTG...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGCTTTATAATGGCTGTTaGGTCCTTGTCATACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNKVSEHSASTHHSQEVLYNGC*VLVIRG Trigger: GCCCCGTATGACAAGGACTCAACAGCCATTATAAAG...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGCTTTATAATGGCTGTTaGGTCCTTGTCATACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLHMHKALGPVLSTVQAKLYNGC*VLVIRG Trigger: GCCCCGTATGACAAGGACTCAACAGCCATTATAAAG...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTAGCGAGGTCATCGTTTaGCCTCTGGTGAATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQTSSRGQCHTRLEAGISSEVIV*PLVNVS Trigger: AGAGACATTCACCAGAGGGCAAACGATGACCTCGCT...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACAGTCATACGGGGCTCCTaGTCCATCTTCTTTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NKVSEHSASTHHSQEVNTVIRGS*SIFFET Trigger: GGTCTCAAAGAAGATGGAGCAGGAGCCCCGTATGAC...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | GACAGTACAGTGGCTCTCACTGTTATTGTACAGGTTTTTGCTTCAAAGTGCTCACCAATGCCCAGCAAGTaGCTGCTCCTCCAGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTVALTVIVQVFASKCSPMPSK*LLLQRP Trigger: AGGCCTCTGGAGGAGCAGCCACTTGCTGGGCATTGG...TGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR GCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTGATGACGAAGATCAGTaGCCCGGTTCCCCGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVDDEDQ*PGSPED Trigger: ATCTTCCGGGGAACCGGGGCACTGATCTTCGTCATC...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTCGGCGTGCTGTCGGTTaGAATATAAATCTTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SDIFKRSVSHQARGRNQCRRAVG*NINLTD Trigger: GTCAGTAAGATTTATATTGCAACCGACAGCACGCCG...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGCGGCGTGCTGTCGGTTaGAATATAAATCTTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLNKVSEHSASTHHSQEVRRAVG*NINLTD Trigger: GTCAGTAAGATTTATATTGCAACCGACAGCACGCCG...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACAGGGAAGTCCCAAATCTaGAAGTTGACGAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKVSEHSASTHHSQEVNTGKSQI*KLTKEL Trigger: CAGCTCCTTCGTCAACTTCCAGATTTGGGACTTCCC...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCCGAAGACTTCATGGATaGCCTTCCGGAAGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTQPVFVECIPYVNHDSSRRLHG*PSGSSG Trigger: TCCACTGCTTCCGGAAGGCCATCCATGAAGTCTTCG...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 72 bp | TTCTGTCTTGCAGAGCAAGCTGGTGGCAAGCTGATCTaGGTAGGAACAGGCAAAGGACATGAGGTATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FCLAEQAGGKLI*VGTGKGHEVCC Trigger: ACAACATACCTCATGTCCTTTGCCTGTTCCTACCAAGATCAGCTTGCCACCAGCTTGCTCTGCAAGACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | ATTCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTTGTGGGATCAGTTTCTaGACCACTTTGCTAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQTSSRGQCHTRLEAGISCGISF*TTLLKA Trigger: AGCCTTTAGCAAAGTGGTTCAGAAACTGATCCCACA...ACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTCAAAGCTTTCCTCTCTaGCGAAGCAAACGAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVQSFPL*RSKRAP Trigger: TGGCGCTCGTTTGCTTCGTCAGAGAGGAAAGCTTTG...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCAGCGAGGTCATCGTTTaGCCTCTGGTGAATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTQPVFVECIPYVNHDSSSEVIV*PLVNVS Trigger: AGAGACATTCACCAGAGGGCAAACGATGACCTCGCT...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTCACTGCACCAGCTCCTaGGCATCCAACTGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVHCTSS*ASNCFF Trigger: GAAGAAACAGTTGGATGCCCAGGAGCTGGTGCAGTG...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR TCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTCCCAAATCTGGAAGTTaGCGAAGGAGCTGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVPKSGS*RRSCWR Trigger: TCTCCAACAGCTCCTTCGTCAACTTCCAGATTTGGG...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | GACAGTACAGTGGCTCTCACTGTTATTGTACAGGTTTTTGCTTCAAAGTGCTCACAAAGCTTTCCTCTCTaGCGAAGCAAACGAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTVALTVIVQVFASKCSQSFPL*RSKRAP Trigger: TGGCGCTCGTTTGCTTCGTCAGAGAGGAAAGCTTTG...TGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTAAATCTGCCTGCCTCTaGCTCCTGAGCACTAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVKSACL*LLSTRM Trigger: CATTCTAGTGCTCAGGAGGCAGAGGCAGGCAGATTT...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR GCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTGCATGTCCACCGGCGTaGTGTCGGTTGCAATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVACPPA*CRLQYK Trigger: TTTATATTGCAACCGACAGCACGCCGGTGGACATGC...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | CCAGGACAGCCAGGGCTACATAGAGATACGCTGTCTCAAATAATAAAGAATTTGGTCATACGGGGCTCCTaGTCCATCTTCTTTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PGQPGLHRDTLSQIIKNLVIRGS*SIFFET Trigger: GGTCTCAAAGAAGATGGAGCAGGAGCCCCGTATGAC...CAAATTCTTTATTATTTGAGACAGCGTATCTCTATGTAGCCCTGGCTGTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | TCGGCACACAAACATGCTTTCAAGTTGGCAGTTAACATCCCTGAAGACTGTGTTGGGAAGTCCCAAATCTaGAAGTTGACGAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAHKHAFKLAVNIPEDCVGKSQI*KLTKEL Trigger: CAGCTCCTTCGTCAACTTCCAGATTTGGGACTTCCC...AACACAGTCTTCAGGGATGTTAACTGCCAACTTGAAAGCATGTTTGTGTGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACCAGCGTCGGGAGCTGTaGGATCAGTTTCTGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNQRREL*DQFLNH Trigger: GTGGTTCAGAAACTGATCCCACAGCTCCCGACGCTG...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | GACAGTACAGTGGCTCTCACTGTTATTGTACAGGTTTTTGCTTCAAAGTGCTCACGAAGACTTCATGGATaGCCTTCCGGAAGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSTVALTVIVQVFASKCSRRLHG*PSGSSG Trigger: TCCACTGCTTCCGGAAGGCCATCCATGAAGTCTTCG...TGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | TGCCTTCACATGCACAAAGCTCTGGGTCCAGTTCTCAGCACTGTTCAAGCCAAGAATTTTGTGGTCATCTaGCAGACCATCTACTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: CLHMHKALGPVLSTVQAKNFVVI*QTIYFM Trigger: CATAAAGTAGATGGTCTGTCAGATGACCACAAAATT...CTTGGCTTGAACAGTGCTGAGAACTGGACCCAGAGCTTTGTGCATGTGAAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | GGGAACCCTCTTGGCTTGTGTGTTTTAGACCCCTCGGCAGGTACAGTATTGCTTCTCAATTCCAGAATTTaGGATAAAGATGTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNPLGLCVLDPSAGTVLLLNSRI*DKDVQQ Trigger: CTGCTGAACATCTTTATCTCAAATTCTGGAATTGAG...AAGCAATACTGTACCTGCCGAGGGGTCTAAAACACACAAGCCAAGAGGGTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGGCGCCAAGAACTTTGTaGCCTCTTTTAAATAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLNKVSEHSASTHHSQEVAPRTL*PLLNKE Trigger: TTCTTTATTTAAAAGAGGTCACAAAGTTCTTGGCGC...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCCAAAGCTTTCCTCTCTaGCGAAGCAAACGAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRRHPYFSTLVGIILEIQSFPL*RSKRAP Trigger: TGGCGCTCGTTTGCTTCGTCAGAGAGGAAAGCTTTG...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGTCTGCCTGCTCTACACATCTTCAAGTTCTCAATTCCTAAAACCAAACGTCATACGGGGCTCCTaGTCCATCTTCTTTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: AKVCLLYTSSSSQFLKPNVIRGS*SIFFET Trigger: GGTCTCAAAGAAGATGGAGCAGGAGCCCCGTATGAC...GTTTGGTTTTAGGAATTGAGAACTTGAAGATGTGTAGAGCAGGCAGACTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTACCTCGAAGACTTCATaGATGGCCTTCCGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQFLKPNTCSTEATVVRSTSKTS*MAFRKQ Trigger: CTGCTTCCGGAAGGCCATCCATGAAGTCTTCGAGGT...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACACTGCTCCATCTTCTTTaGGACCATAAATACAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKVSEHSASTHHSQEVNTLLHLL*DHKYKR Trigger: TCTCTTGTATTTATGGTCTCAAAGAAGATGGAGCAG...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | AATATAATGGATCAATTTCCGATTGCCATATGGACTGTAGAGTATGCGTGTCCTACCTCGAAGACTTCATaGATGGCCTTCCGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NIMDQFPIAIWTVEYACPTSKTS*MAFRKQ Trigger: CTGCTTCCGGAAGGCCATCCATGAAGTCTTCGAGGT...AGGACACGCATACTCTACAGTCCATATGGCAATCGGAAATTGATCCATTATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 72 bp | GAGCAAGCTGCTTTAGACACAAAGCTAGAACCAGCTTaGACATCCCTAAGGGACTCTGCTTTAAAAAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: EQAALDTKLEPA*TSLRDSALKRT Trigger: GGTTCTTTTTAAAGCAGAGTCCCTTAGGGATGTCAAAGCTGGTTCTAGCTTTGTGTCTAAAGCAGCTTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | AATATAATGGATCAATTTCCGATTGCCATATGGACTGTAGAGTATGCGTGTCCTCCCAAATCTGGAAGTTaGCGAAGGAGCTGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NIMDQFPIAIWTVEYACPPKSGS*RRSCWR Trigger: TCTCCAACAGCTCCTTCGTCAACTTCCAGATTTGGG...AGGACACGCATACTCTACAGTCCATATGGCAATCGGAAATTGATCCATTATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCCTTTATAATGGCTGTTaGGTCCTTGTCATACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRRHPYFSTLVGIILEILYNGC*VLVIRG Trigger: GCCCCGTATGACAAGGACTCAACAGCCATTATAAAG...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | GACAGTACAGTGGCTCTCACTGTTATTGTACAGGTTTTTGCTTCAAAGTGCTCACGGCGTGCTGTCGGTTaGAATATAAATCTTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSTVALTVIVQVFASKCSRRAVG*NINLTD Trigger: GTCAGTAAGATTTATATTGCAACCGACAGCACGCCG...TGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | GACAGTACAGTGGCTCTCACTGTTATTGTACAGGTTTTTGCTTCAAAGTGCTCAAAAGTCAATCTGCCCTaGGAAGTCCCAAATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DSTVALTVIVQVFASKCSKVNLP*EVPNLE Trigger: TTCCAGATTTGGGACTTCCCAGGGCAGATTGACTTT...TGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTTGTGGGATCAGTTTCTaGACCACTTTGCTAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQFLKPNTCSTEATVVRSCGISF*TTLLKA Trigger: AGCCTTTAGCAAAGTGGTTCAGAAACTGATCCCACA...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | TACACCCAGCCTGTGTTTGTTGAGTGCATACCATACGTCAATCATGACAGTTCCCTCAATTCCAGAATTTaGGATAAAGATGTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTQPVFVECIPYVNHDSSLNSRI*DKDVQQ Trigger: CTGCTGAACATCTTTATCTCAAATTCTGGAATTGAG...GGAACTGTCATGATTGACGTATGGTATGCACTCAACAAACACAGGCTGGGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGACAGCCAGGGCTACATAGAGATACGCTGTCTCAAATAATAAAGAATTTGCTGCTCCATCTTCTTTaGGACCATAAATACAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGQPGLHRDTLSQIIKNLLLHLL*DHKYKR Trigger: TCTCTTGTATTTATGGTCTCAAAGAAGATGGAGCAG...CAAATTCTTTATTATTTGAGACAGCGTATCTCTATGTAGCCCTGGCTGTCCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR GCA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAAAGCGAGGTCATCGTTTaGCCTCTGGTGAATGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKSEVIV*PLVNVS Trigger: AGAGACATTCACCAGAGGGCAAACGATGACCTCGCT...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CCA 90 bp | AATATAATGGATCAATTTCCGATTGCCATATGGACTGTAGAGTATGCGTGTCCTAAAGTCAATCTGCCCTaGGAAGTCCCAAATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NIMDQFPIAIWTVEYACPKVNLP*EVPNLE Trigger: TTCCAGATTTGGGACTTCCCAGGGCAGATTGACTTT...AGGACACGCATACTCTACAGTCCATATGGCAATCGGAAATTGATCCATTATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGACAGCCAGGGCTACATAGAGATACGCTGTCTCAAATAATAAAGAATTTGGCGCCAAGAACTTTGTaGCCTCTTTTAAATAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGQPGLHRDTLSQIIKNLAPRTL*PLLNKE Trigger: TTCTTTATTTAAAAGAGGTCACAAAGTTCTTGGCGC...CAAATTCTTTATTATTTGAGACAGCGTATCTCTATGTAGCCCTGGCTGTCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 72 bp | TCCGATTGCCATATGGACTGTAGAGTATGCGTGTCCTaGTCATCAAGTACAGAAAAGAGTTTAGAAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDCHMDCRVCVS*SSSTEKSLEKS Trigger: TGACTTTTCTAAACTCTTTTCTGTACTTGATGACAAGGACACGCATACTCTACAGTCCATATGGCAATCGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 72 bp | AACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTTaGACCTTTCAGTTTATAGTCCCATTTGAGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTCSTEATVVRS*TFQFIVPFEHR Trigger: TCTATGCTCAAATGGGACTATAAACTGAAAGGTCAAACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTAATTTTGTGGTCATCTaGCAGACCATCTACTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SQFLKPNTCSTEATVVRSNFVVI*QTIYFM Trigger: CATAAAGTAGATGGTCTGTCAGATGACCACAAAATT...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCCTCAATTCCAGAATTTaGGATAAAGATGTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRRHPYFSTLVGIILEILNSRI*DKDVQQ Trigger: CTGCTGAACATCTTTATCTCAAATTCTGGAATTGAG...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| 3UTR CAA 72 bp | ACTTACGTAGTGACAGTACAGTGGCTCTCACTGTTATaGTACAGGTTTTTGCTTCAAAGTGCTCATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: TYVVTVQWLSLL*YRFLLQSAHFI Trigger: AATAAAATGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTCACTACGTAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS CCA 90 bp | GCAAGTGGCTGCTCCTCCAGAGGCCTGGTTCCCAGCACTCATGCCTaGTGGCTTCACTGCACCAGCTCCTGGGCATCCAACTGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASGCSSRGLVPSTHA*WLHCTSSWASNCFF Trigger: GAAGAAACAGTTGGATGCCCAGGAGCTGGTGCAGTGAAGCCACCAGGCATGAGTGCTGGGAACCAGGCCTCTGGAGGAGCAGCCACTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS GCA 90 bp | ACCTCAGTGCTGAAGGGGTCGCTGAAGTCCAGAAAGAAATCTGCCTaGCTCTGCCTCCTGAGCACTAGAATGAAAGGCATGCGCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSVLKGSLKSRKKSA*LCLLSTRMKGMRHP Trigger: TGGATGGCGCATGCCTTTCATTCTAGTGCTCAGGAGGCAGAGGCAGGCAGATTTCTTTCTGGACTTCAGCGACCCCTTCAGCACTGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGTTGACGAAGGAGCTGTaGGAGACGTCTTCCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLNKVSEHSASTHHSQEVLTKEL*ETSSRQ Trigger: CTGCCGGGAAGACGTCTCCAACAGCTCCTTCGTCAA...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS TCA 90 bp | CTGTTGGTGCTCTCCAAGAACAGCGTCTCGCTCGGGGACATTTTGTaGAAGACGACTTTCTGGATAGACGACTTGCCGCTCCTCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLVLSKNSVSLGDIL*KTTFWIDDLPLLLR Trigger: TCTCAGGAGGAGCGGCAAGTCGTCTATCCAGAAAGTCGTCTTTCACAAAATGTCCCCGAGCGAGACGCTGTTCTTGGAGAGCACCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGCAGCGAGGTCATCGTTaGCCCTCTGGTGAATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLNKVSEHSASTHHSQEVQRGHR*PSGECL Trigger: GAGACATTCACCAGAGGGCAAACGATGACCTCGCTG...CACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS GCA 90 bp | ACAGCAGAGCTCGTACGTCTGCATGTCCACCGGCGTGCTGTCGGTTaGAATATAAATCTTACTGACCACGTCAAACAGAAACGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TAELVRLHVHRRAVG*NINLTDHVKQKRFL Trigger: GAGAAAGCGTTTCTGTTTGACGTGGTCAGTAAGATTTATATTGCAACCGACAGCACGCCGGTGGACATGCAGACGTACGAGCTCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | GACAGTACAGTGGCTCTCACTGTTATTGTACAGGTTTTTGCTTCAAAGTGCTCATCCCGGCAGATCCTGTaGGTGCTCTCCAAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSTVALTVIVQVFASKCSSRQIL*VLSKNS Trigger: GCTGTTCTTGGAGAGCACCAACAGGATCTGCCGGGA...TGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | GACAGTACAGTGGCTCTCACTGTTATTGTACAGGTTTTTGCTTCAAAGTGCTCATTGACGAAGGAGCTGTaGGAGACGTCTTCCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSTVALTVIVQVFASKCSLTKEL*ETSSRQ Trigger: CTGCCGGGAAGACGTCTCCAACAGCTCCTTCGTCAA...TGAGCACTTTGAAGCAAAAACCTGTACAATAACAGTGAGAGCCACTGTACTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCTCCCGGCAGATCCTGTaGGTGCTCTCCAAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLRRHPYFSTLVGIILEISRQIL*VLSKNS Trigger: GCTGTTCTTGGAGAGCACCAACAGGATCTGCCGGGA...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCCTCCTGTAGTGCAGTATAGTTTAACAGCCTCCTCACTGAGGTCTGGAATAAACACCTCAAAGTaGATATCAGTGTTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPPVVQYSLTASSLRSGINTSK*ISVFTL Trigger: CAAGGTGAACACTGATATCAACTTTGAGGTGTTTAT...TCCAGACCTCAGTGAGGAGGCTGTTAAACTATACTGCACTACAGGAGGGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | AACAAGGTCTCTGAACATAGCGCATCAACACACCATTCCCAGGAGGTGAACACACTCTGGGTTTCAATTTaGTGGTCATCTGACAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: NKVSEHSASTHHSQEVNTLWVSI*WSSDRP Trigger: TGGTCTGTCAGATGACCACAAAATTGAAACCCAGAG...TGTGTTCACCTCCTGGGAATGGTGTGTTGATGCGCTATGTTCAGAGACCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTCAGCGAGGTCATCGTTaGCCCTCTGGTGAATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQFLKPNTCSTEATVVRSQRGHR*PSGECL Trigger: GAGACATTCACCAGAGGGCAAACGATGACCTCGCTG...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS CCA 90 bp | TTCGAGATTTCACCATCTTCATCCTCACCTCGAAGACTTCATGGATaGCCTTCCGGAAGCAGTGGAAATTATAGTCAATCAGCCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FEISPSSSSPRRLHG*PSGSSGNYSQSALF Trigger: GAAAAGGGCTGATTGACTATAATTTCCACTGCTTCCGGAAGGCCATCCATGAAGTCTTCGAGGTGAGGATGAAGATGGTGAAATCTCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | TCAGACATCTTCAAGAGGTCAGTGTCACACCAGGCTCGAGGCAGGAATCAGTGTATAAACACCTCAAAGTaGATATCAGTGTTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDIFKRSVSHQARGRNQCINTSK*ISVFTL Trigger: CAAGGTGAACACTGATATCAACTTTGAGGTGTTTAT...ACACTGATTCCTGCCTCGAGCCTGGTGTGACACTGACCTCTTGAAGATGTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS TCA 90 bp | TCTGCATGTCCACCGGCGTGCTGTCGGTTGCAATATAAATCTTACTaGCCACGTCAAACAGAAACGCTTTCTCAATTCCAGAATTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SACPPACCRLQYKSY*PRQTETLSQFQNLR Trigger: TCTCAAATTCTGGAATTGAGAAAGCGTTTCTGTTTGACGTGGTCAGTAAGATTTATATTGCAACCGACAGCACGCCGGTGGACATGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCTCCCAAATCTGGAAGTaGACGAAGGAGCTGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRRHPYFSTLVGIILEISQIWK*TKELLE Trigger: CTCCAACAGCTCCTTCGTCAACTTCCAGATTTGGGA...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | TGGTTTGAAATAGGGCTAGATTTAGGACTCTTAGTTCCCTACCTATCTATAAAACAGCGAGGTCATCGTTaGCCCTCTGGTGAATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WFEIGLDLGLLVPYLSIKQRGHR*PSGECL Trigger: GAGACATTCACCAGAGGGCAAACGATGACCTCGCTG...TTTTATAGATAGGTAGGGAACTAAGAGTCCTAAATCTAGCCCTATTTCAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCCTCTGGGTTTCAATTTaGTGGTCATCTGACAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LLRRHPYFSTLVGIILEILWVSI*WSSDRP Trigger: TGGTCTGTCAGATGACCACAAAATTGAAACCCAGAG...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | TCTCAATTCCTAAAACCAAACACATGTTCTACTGAAGCCACCGTAGTTAGGAGTCTCTGGGTTTCAATTTaGTGGTCATCTGACAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SQFLKPNTCSTEATVVRSLWVSI*WSSDRP Trigger: TGGTCTGTCAGATGACCACAAAATTGAAACCCAGAG...ACTCCTAACTACGGTGGCTTCAGTAGAACATGTGTTTGGTTTTAGGAATTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS TCA 90 bp | TGCCCTCTGGTGAATGTCTCTCTGGGTTTCAATTTTGTGGTCATCTaGCAGACCATCTACTTTATGAATAAACACCTCAAAGTTGATATC | + |
|
Preference number: 5 (lower is better) Translates to: CPLVNVSLGFNFVVI*QTIYFMNKHLKVDI Trigger: GATATCAACTTTGAGGTGTTTATTCATAAAGTAGATGGTCTGTCAGATGACCACAAAATTGAAACCCAGAGAGACATTCACCAGAGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTCAGACGACATCCATATTTCTCTACACTGGTTGGCATCATTTTAGAAATCATAAACACCTCAAAGTaGATATCAGTGTTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRRHPYFSTLVGIILEIINTSK*ISVFTL Trigger: CAAGGTGAACACTGATATCAACTTTGAGGTGTTTAT...GATTTCTAAAATGATGCCAACCAGTGTAGAGAAATATGGATGTCGTCTGAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS CCA 72 bp | TGCTCCTCCAGAGGCCTGGTTCCCAGCACTCATGCCTaGTGGCTTCACTGCACCAGCTCCTGGGCATCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSSRGLVPSTHA*WLHCTSSWASN Trigger: GTTGGATGCCCAGGAGCTGGTGCAGTGAAGCCACCAGGCATGAGTGCTGGGAACCAGGCCTCTGGAGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS CCA 72 bp | TCCTCCAGAGGCCTGGTTCCCAGCACTCATGCCTGGTaGCTTCACTGCACCAGCTCCTGGGCATCCAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSRGLVPSTHAW*LHCTSSWASNC Trigger: ACAGTTGGATGCCCAGGAGCTGGTGCAGTGAAGCCACCAGGCATGAGTGCTGGGAACCAGGCCTCTGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS CCA 72 bp | ACCAATGCCCAGCAAGTGGCTGCTCCTCCAGAGGCCTaGTTCCCAGCACTCATGCCTGGTGGCTTCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TNAQQVAAPPEA*FPALMPGGFTA Trigger: TGCAGTGAAGCCACCAGGCATGAGTGCTGGGAACCAGGCCTCTGGAGGAGCAGCCACTTGCTGGGCATTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS CCA 72 bp | AGGAGCTGTTGGAGACGTCTTCCCGGCAGATCCTGTTaGTGCTCTCCAAGAACAGCGTCTCGCTCGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RSCWRRLPGRSC*CSPRTASRSGT Trigger: TGTCCCCGAGCGAGACGCTGTTCTTGGAGAGCACCAACAGGATCTGCCGGGAAGACGTCTCCAACAGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS CAA 72 bp | AAGGAGCTGTTGGAGACGTCTTCCCGGCAGATCCTGTaGGTGCTCTCCAAGAACAGCGTCTCGCTCGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KELLETSSRQIL*VLSKNSVSLGD Trigger: GTCCCCGAGCGAGACGCTGTTCTTGGAGAGCACCAACAGGATCTGCCGGGAAGACGTCTCCAACAGCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS TCA 72 bp | GGGCCAGCGCTTCCATATAGTCATCCTGGGAGTCGATaGCGAAGATCAGTGCCCCGGTTCCCCGGAAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: GPALPYSHPGSR*RRSVPRFPGRS Trigger: TGATCTTCCGGGGAACCGGGGCACTGATCTTCGTCATCGACTCCCAGGATGACTATATGGAAGCGCTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS GCA 72 bp | AGCTGTTGGAGACGTCTTCCCGGCAGATCCTGTTGGTaGTCTCCAAGAACAGCGTCTCGCTCGGGGACATTT | + |
|
Preference number: 6 (lower is better) Translates to: SCWRRLPGRSCW*SPRTASRSGTF Trigger: AAATGTCCCCGAGCGAGACGCTGTTCTTGGAGAGCACCAACAGGATCTGCCGGGAAGACGTCTCCAACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS CAA 72 bp | GGGAAGTCCCAAATCTGGAAGTTGACGAAGGAGCTGTaGGAGACGTCTTCCCGGCAGATCCTGTTGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKSQIWKLTKEL*ETSSRQILLVL Trigger: GAGCACCAACAGGATCTGCCGGGAAGACGTCTCCAACAGCTCCTTCGTCAACTTCCAGATTTGGGACTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS CAA 72 bp | ACTCTAGGGGTCCCATTGGGAGTAGCTCCTGTCTTCTaGGGTAGCCGACTCTGGGCCTTTCGAGATTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: TLGVPLGVAPVF*GSRLWAFRDFT Trigger: GGTGAAATCTCGAAAGGCCCAGAGTCGGCTACCCAAGAAGACAGGAGCTACTCCCAATGGGACCCCTAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS CAA 90 bp | ATCTGCCCTGGGAAGTCCCAAATCTGGAAGTTGACGAAGGAGCTGTaGGAGACGTCTTCCCGGCAGATCCTGTTGGTGCTCTCCAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ICPGKSQIWKLTKEL*ETSSRQILLVLSKN Trigger: GTTCTTGGAGAGCACCAACAGGATCTGCCGGGAAGACGTCTCCAACAGCTCCTTCGTCAACTTCCAGATTTGGGACTTCCCAGGGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS TCA 72 bp | AGTCAATCTGCCCTGGGAAGTCCCAAATCTGGAAGTTaGCGAAGGAGCTGTTGGAGACGTCTTCCCGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SQSALGSPKSGS*RRSCWRRLPGR Trigger: TCTGCCGGGAAGACGTCTCCAACAGCTCCTTCGTCAACTTCCAGATTTGGGACTTCCCAGGGCAGATTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS CAA 72 bp | AAGTCAATCTGCCCTGGGAAGTCCCAAATCTGGAAGTaGACGAAGGAGCTGTTGGAGACGTCTTCCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KSICPGKSQIWK*TKELLETSSRQ Trigger: CTGCCGGGAAGACGTCTCCAACAGCTCCTTCGTCAACTTCCAGATTTGGGACTTCCCAGGGCAGATTGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS CAA 90 bp | TACAGCAGCACTCTAGGGGTCCCATTGGGAGTAGCTCCTGTCTTCTaGGGTAGCCGACTCTGGGCCTTTCGAGATTTCACCATCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: YSSTLGVPLGVAPVF*GSRLWAFRDFTIFI Trigger: GATGAAGATGGTGAAATCTCGAAAGGCCCAGAGTCGGCTACCCAAGAAGACAGGAGCTACTCCCAATGGGACCCCTAGAGTGCTGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS TCA 72 bp | CTCTCCAAGAACAGCGTCTCGCTCGGGGACATTTTGTaGAAGACGACTTTCTGGATAGACGACTTGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSKNSVSLGDIL*KTTFWIDDLPL Trigger: GAGCGGCAAGTCGTCTATCCAGAAAGTCGTCTTTCACAAAATGTCCCCGAGCGAGACGCTGTTCTTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029946.14 ENSMUST00000098190.10 |
||
| CDS GCA 72 bp | CTGAAGGGGTCGCTGAAGTCCAGAAAGAAATCTGCCTaGCTCTGCCTCCTGAGCACTAGAATGAAAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LKGSLKSRKKSA*LCLLSTRMKGM Trigger: CATGCCTTTCATTCTAGTGCTCAGGAGGCAGAGGCAGGCAGATTTCTTTCTGGACTTCAGCGACCCCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029946.14 |
||
| CDS GCA 72 bp | CTCGTACGTCTGCATGTCCACCGGCGTGCTGTCGGTTaGAATATAAATCTTACTGACCACGTCAAACAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVRLHVHRRAVG*NINLTDHVKQK Trigger: TTTCTGTTTGACGTGGTCAGTAAGATTTATATTGCAACCGACAGCACGCCGGTGGACATGCAGACGTACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS CCA 72 bp | TCACCATCTTCATCCTCACCTCGAAGACTTCATGGATaGCCTTCCGGAAGCAGTGGAAATTATAGTCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSSSSPRRLHG*PSGSSGNYSQS Trigger: TGATTGACTATAATTTCCACTGCTTCCGGAAGGCCATCCATGAAGTCTTCGAGGTGAGGATGAAGATGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||
| CDS TCA 72 bp | GTGAATGTCTCTCTGGGTTTCAATTTTGTGGTCATCTaGCAGACCATCTACTTTATGAATAAACACCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VNVSLGFNFVVI*QTIYFMNKHLK Trigger: TTTGAGGTGTTTATTCATAAAGTAGATGGTCTGTCAGATGACCACAAAATTGAAACCCAGAGAGACATTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029946.14 ENSMUST00000084747.6 ENSMUST00000098190.10 |
||