Pregenerated sensors for RRAD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031880Ensembl transcript IDs: ENSMUST00000034351.8, ENSMUST00000212163.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAGTCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTaGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: QSPVHKLGSGCLVCM*ACTMHLHGPRPLWP Trigger: TGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGACTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR GCA 90 bp | ACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATaGATCTCCATGGGCCTAGGCCTCTCTGGCCATTTGGAGTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: TSWVQAAWYACGPAQ*ISMGLGLSGHLELP Trigger: AGGCAACTCCAAATGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR GCA 90 bp | CCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGCTGGGTTCAGGCTaGTTGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: PHRERQSPVHKLGSG*LVCMWACTMHLHGP Trigger: AGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCCTTTCTCTATGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CCA 90 bp | TGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTaGCCATTTGGAGTTGCCTCCCTGGTCAGCACTATCTTTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: CMWACTMHLHGPRPL*PFGVASLVSTIFLS Trigger: GGACAGAAAGATAGTGCTGACCAGGGAGGCAACTCCAAATGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CCA 90 bp | ATAGAGAAAGGCAGAGTCCTGTCCACAAGCTGGGTTCAGGCTGCTTaGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: IEKGRVLSTSWVQAA*YACGPAQCISMGLG Trigger: GCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCCTTTCTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCCTGTCTGTGGGCCTGCACAATaGATCTCCATGGGCCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: NSLPPGHRHPHRERQSPVCGPAQ*ISMGLG Trigger: GCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACA...GACAGGACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGGCCTCTCTGGCCATTTaGAGTTGCCTCCCTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LPPGHRHPHRERQSPVHKASLAI*SCLPGQ Trigger: CTGACCAGGGAGGCAACTCCAAATGGCCAGAGAGGC...CTTGTGGACAGGACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCCTCCAGCCATTTACTaGCCCATTAAGCAAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LVCMWACTMHLHGPRPLWPPAIY*PIKQGG Trigger: GCCCCCTTGCTTAATGGGCCAGTAAATGGCTGGAGG...CCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR-3UTR CCA 90 bp | GACACCCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGCTGGGTTCAGGCTGCTTCTAGAACAGTTGCCTaGGCCAGTCCCTCCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: DTRIEKGRVLSTSWVQAASRTVA*ASPSSH Trigger: ATGGCTGGAGGGACTGGCCCAGGCAACTGTTCTAGA...AGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCCTTTCTCTATGCGGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CAA 90 bp | CTGAGAAACACAGAGGATGAACCAACTCTGAGACATCTAGAACAGTaGCCTGGGCCAGTCCCTCCAGCCATTTACTGGCCCATTAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LRNTEDEPTLRHLEQ*PGPVPPAIYWPIKQ Trigger: TTGCTTAATGGGCCAGTAAATGGCTGGAGGGACTGGCCCAGGCAACTGTTCTAGATGTCTCAGAGTTGGTTCATCCTCTGTGTTTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR-3UTR CAA 90 bp | AACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCCTGTCCTGGGTTCAGGCTGCTaGGTATGCATGTGGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: NSLPPGHRHPHRERQSPVLGSGC*VCMWAC Trigger: GCAGGCCCACATGCATACCAAGCAGCCTGAACCCAG...GACAGGACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCAGACATCTAGAACAGTaGCCTGGGCCAGTCCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: WYACGPAQCISMGLGLSGRHLEQ*PGPVPP Trigger: TGGAGGGACTGGCCCAGGCAACTGTTCTAGATGTCT...GCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR GCA 72 bp | AAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTaGACAATGCATCTCCATGGGCCTAGGCCTCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: KLGSGCLVCMWA*TMHLHGPRPLW Trigger: CCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CCA 72 bp | GCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTaGCCATTTGGAGTTGCCTCCCTGGTCAGCACTATC | + |
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Preference number: 3 (lower is better) Translates to: ACTMHLHGPRPL*PFGVASLVSTI Trigger: GATAGTGCTGACCAGGGAGGCAACTCCAAATGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CCA 72 bp | GTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTaGGCCTGCACAATGCATCTCCATGGGCCTAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VHKLGSGCLVCM*ACTMHLHGPRP Trigger: AGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR GCA 72 bp | GTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATaGATCTCCATGGGCCTAGGCCTCTCTGGCCATTTG | + |
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Preference number: 3 (lower is better) Translates to: VQAAWYACGPAQ*ISMGLGLSGHL Trigger: CAAATGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR GCA 72 bp | AGTCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATaGATGTGGGCCTGCACAATGCATCTCCATGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SPVHKLGSGCLV*MWACTMHLHGP Trigger: AGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CCA 72 bp | GGCAGAGTCCTGTCCACAAGCTGGGTTCAGGCTGCTTaGTATGCATGTGGGCCTGCACAATGCATCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: GRVLSTSWVQAA*YACGPAQCISM Trigger: CATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CCA 72 bp | ACCCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGCTaGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: TRIEKGRVLSTS*VQAAWYACGPA Trigger: TGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCCTTTCTCTATGCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR GCA 72 bp | GAAAGGCAGAGTCCTGTCCACAAGCTGGGTTCAGGCTaGTTGGTATGCATGTGGGCCTGCACAATGCATCTC | + |
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Preference number: 3 (lower is better) Translates to: ERQSPVHKLGSG*LVCMWACTMHL Trigger: GAGATGCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR-3UTR CAA 90 bp | ATATTGAACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTTCTGGCCATTTGGAGTaGCCTCCCTGGTCAGCACTA | + |
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Preference number: 3 (lower is better) Translates to: ILNSLPPGHRHPHRERQSSGHLE*PPWSAL Trigger: TAGTGCTGACCAGGGAGGCAACTCCAAATGGCCAGA...ACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTTCAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR TCA 72 bp | TGCTGCATAGTTGACAGTTCTGAGAAACACAGAGGATaGACCAACTCTGAGACATCTAGAACAGTTGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CCIVDSSEKHRG*TNSETSRTVAW Trigger: CCAGGCAACTGTTCTAGATGTCTCAGAGTTGGTTCATCCTCTGTGTTTCTCAGAACTGTCAACTATGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | AACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCCTGTCGGCATGCTCCTGCGGTaGAGTGGGGGTGCCGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NSLPPGHRHPHRERQSPVGMLLR*SGGAGP Trigger: GGGCCCGGCACCCCCACTGCACCGCAGGAGCATGCC...GACAGGACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | GCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCCTGTCCACACCACCGGCATGCTCCTaGGGTGCAGTGGGGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: ASLQGTDTRIEKGRVLSTPPACS*GAVGVP Trigger: CGGCACCCCCACTGCACCGCAGGAGCATGCCGGTGG...TGTGGACAGGACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | TTGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGGGCCCCATGGGGTGCTaGCTCGACGGCGGTCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LVCMWACTMHLHGPRPLWGPMGC*LDGGRA Trigger: AGCGCGACCGCCGTCGAGGCAGCACCCCATGGGGCC...CCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | CTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGGCTCGTCCACCGGCATaGTCCTGCGGTGCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPPGHRHPHRERQSPVHKARPPA*SCGAVG Trigger: CCCCACTGCACCGCAGGAGCATGCCGGTGGACGAGC...CTTGTGGACAGGACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | TCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATGCTCCTGCGGTGCAGTaGGGGTGCCGGGCCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: SCPQAGFRLLGMHVGLHNAPAVQ*GCRAPW Trigger: CCATGGGGCCCGGCACCCCCACTGCACCGCAGGAGC...ATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | TGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCCCCATGGCCATGCAGTaGCCAGGCAGCCAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WYACGPAQCISMGLGLSGPMAMQ*PGSQQP Trigger: GGGCTGCTGGCTGCCTGGCCACTGCATGGCCATGGG...GCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR TCA 90 bp | ATATTGAACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTGGGGCTAGCGCCGCCTaGAGGTCTCGCTCGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: ILNSLPPGHRHPHRERQSGASAA*RSRSST Trigger: GGTGGACGAGCGAGACCTTCAGGCGGCGCTAGCCCC...ACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTTCAATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | GTCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAACATCCCCCATGGCCATaGAGTGGCCAGGCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VLSTSWVQAAWYACGPAQHPPWP*SGQAAS Trigger: GCTGGCTGCCTGGCCACTGCATGGCCATGGGGGATG...TTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | GTCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAAGCAGTCGAAGACCACTaGGCAGGCCCGGCCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: VLSTSWVQAAWYACGPAQAVEDH*AGPALI Trigger: GATGAGGGCCGGGCCTGCGCAGTGGTCTTCGACTGC...TTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | ATATTGAACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCGGGCCCGCCGCAGCTaGACCCGGAGTTCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ILNSLPPGHRHPHRERQSRARRS*TRSSEA Trigger: AGCCTCAGAACTCCGGGTCCAGCTGCGGCGGGCCCG...ACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTTCAATAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATGCCGCGGAAGGCCATCTTaGGGCTGTTGCGAGCCACGA | + |
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Preference number: 4 (lower is better) Translates to: LSTSWVQAAWYACGPAQCRGRPS*GCCEPR Trigger: TCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCG...GCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | GCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCCATTTGGAGTTGCCTCCCGGTCATGGCAGGACTTaGACTTGGCGCGGAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AQCISMGLGLSGHLELPPGHGRT*TWRGRP Trigger: TGGCCTTCCGCGCCAAGTCCAAGTCCTGCCATGACC...GGGAGGCAACTCCAAATGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR TCA 90 bp | GTCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAACACTGCCTCCAGAACTaGGCGAGTCGGAGGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VLSTSWVQAAWYACGPAQHCLQN*ASRRSL Trigger: AAGGCTCCTCCGACTCGCTCAGTTCTGGAGGCAGTG...TTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | TCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATCCATCTTGCGGCTGTTaGGAGCCACGATGCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SCPQAGFRLLGMHVGLHNPSCGC*EPRCGP Trigger: TGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGG...ATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | TCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATGGCCAGTCCAGCCTCTaGCCCTGTGTCCGAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SCPQAGFRLLGMHVGLHNGQSSL*PCVRVP Trigger: TGGAACTCGGACACAGGGCCAGAGGCTGGACTGGCC...ATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | GCTTGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTCGTATGCATCCCCCATaGCCATGCAGTGGCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: AWYACGPAQCISMGLGLSRMHPP*PCSGQA Trigger: TGCCTGGCCACTGCATGGCCATGGGGGATGCATACG...AGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | GACACCCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGCTGGGTTCAGGCTGCTGGCAGGACTTGGACTTaGCGCGGAAGGCCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: DTRIEKGRVLSTSWVQAAGRTWT*RGRPSC Trigger: GCAAGATGGCCTTCCGCGCCAAGTCCAAGTCCTGCC...AGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCCTTTCTCTATGCGGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR TCA 90 bp | GCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGTGCCTGGACATTGTaGTGCAGTGCTGCTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: ASLQGTDTRIEKGRVLSTSAWTL*CSAADV Trigger: GACATCAGCAGCACTGCATCACAATGTCCAGGCACT...TGTGGACAGGACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | GTCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAACTTCTTTGCTGTCCCTaGGCAGGCGTATCTGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VLSTSWVQAAWYACGPAQLLCCP*AGVSGA Trigger: TGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAG...TTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | TTGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGGGCCCAGAAAGCGTTTaGCCTTCTTGCCAAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LVCMWACTMHLHGPRPLWGPESV*PSCQGS Trigger: AGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCC...CCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR TCA 90 bp | GCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCCATTTGGAGTTGCCTCCCGTGATGCAGTGCTGCTaGTGTCTCGATGAACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: AQCISMGLGLSGHLELPPVMQCC*CLDELA Trigger: TGCAAGTTCATCGAGACATCAGCAGCACTGCATCAC...GGGAGGCAACTCCAAATGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR GCA 90 bp | TCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATCTATACCACCAAAGATaGGCGCCAGAGCGCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SCPQAGFRLLGMHVGLHNLYHQR*APERFC Trigger: GCAAAAGCGCTCTGGCGCGCATCTTTGGTGGTATAG...ATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CCA 90 bp | CCATTTGGAGTTGCCTCCCTGGTCAGCACTATCTTTCTGTCCATGACCATGAGACTGCGCAGGCGTATCTaGCGCACAACCCCCTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: PFGVASLVSTIFLSMTMRLRRRI*RTTPSN Trigger: ATTCGAGGGGGTTGTGCGCCAGATACGCCTGCGCAG...TCTCATGGTCATGGACAGAAAGATAGTGCTGACCAGGGAGGCAACTCCAAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CAA 72 bp | ACAGAGGATGAACCAACTCTGAGACATCTAGAACAGTaGCCTGGGCCAGTCCCTCCAGCCATTTACTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TEDEPTLRHLEQ*PGPVPPAIYWP Trigger: GGGCCAGTAAATGGCTGGAGGGACTGGCCCAGGCAACTGTTCTAGATGTCTCAGAGTTGGTTCATCCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| 3UTR CAA 72 bp | CAATGCATCTCCATGGGCCTAGGCCTCTCTGGCCATTaGGAGTTGCCTCCCTGGTCAGCACTATCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCISMGLGLSGH*ELPPWSALSFC Trigger: ACAGAAAGATAGTGCTGACCAGGGAGGCAACTCCAAATGGCCAGAGAGGCCTAGGCCCATGGAGATGCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCATGTAAACAAACAGCAACCATATTGAACAGCCTCCCTCCAGGGCACAGAAGCGTTTGGCCTTCTTaGCAAGGCTCTCCCGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SACKQTATILNSLPPGHRSVWPS*QGSPVA Trigger: GGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCT...TCTGTGCCCTGGAGGGAGGCTGTTCAATATGGTTGCTGTTTGTTTACATGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR GCA 90 bp | ATATTGAACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTGAACGGTCATATGTGTaGCCTGCTGCTTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILNSLPPGHRHPHRERQSERSYV*PAASAS Trigger: TGAAGCAGAAGCAGCAGGGCACACATATGACCGTTC...ACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTTCAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCATGTAAACAAACAGCAACCATATTGAACAGCCTCCCTCCAGGGCACAGAGGGCGTTATCTTCTTTaGTGTCCCTGCGCAGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SACKQTATILNSLPPGHRGRYLL*CPCAGV Trigger: TACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCC...TCTGTGCCCTGGAGGGAGGCTGTTCAATATGGTTGCTGTTTGTTTACATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CCA 90 bp | GTCCACCGGCATGCTCCTGCGGTGCAGTGGGGGTGCCGGGCCCCATaGGGTGCTGCCTCGACGGCGGTCGCGCTCCCGGCCCGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: VHRHAPAVQWGCRAP*GAASTAVALPARTT Trigger: CGTGGTGCGGGCCGGGAGCGCGACCGCCGTCGAGGCAGCACCCCATGGGGCCCGGCACCCCCACTGCACCGCAGGAGCATGCCGGTGGAC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS TCA 90 bp | GTTCCAGCGGCAGTCGTTGCCAGGGAGCCCGGGGCTAGCGCCGCCTaGAGGTCTCGCTCGTCCACCGGCATGCTCCTGCGGTGCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPAAVVAREPGASAA*RSRSSTGMLLRCSG Trigger: CCCACTGCACCGCAGGAGCATGCCGGTGGACGAGCGAGACCTTCAGGCGGCGCTAGCCCCGGGCTCCCTGGCAACGACTGCCGCTGGAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS GCA 90 bp | GGCTGTTGCGAGCCACGATGCGGCCCAGAAAGCGTTTGGCCTTCTTaGCAAGGCTCTCCCGTCGCCGAGTGCCAGCTTGCCGCCGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GCCEPRCGPESVWPS*QGSPVAECQLAAGR Trigger: ACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CCA 90 bp | CCAGAACTGAGCGAGTCGGAGGAGCCTTCGGGCCAGTCCAGCCTCTaGCCCTGTGTCCGAGTTCCAGCGGCAGTCGTTGCCAGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PELSESEEPSGQSSL*PCVRVPAAVVAREP Trigger: GGGCTCCCTGGCAACGACTGCCGCTGGAACTCGGACACAGGGCCAGAGGCTGGACTGGCCCGAAGGCTCCTCCGACTCGCTCAGTTCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS TCA 90 bp | CACACCAGGCGCCCCGAGCAGCAGCACCTTGTAAACGCCCTCCTCTaGCCCACTGCCTCCAGAACTGAGCGAGTCGGAGGAGCCTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTRRPEQQHLVNALL*PTASRTERVGGAFG Trigger: CCCGAAGGCTCCTCCGACTCGCTCAGTTCTGGAGGCAGTGGGTCAGAGGAGGGCGTTTACAAGGTGCTGCTGCTCGGGGCGCCTGGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CCA 90 bp | CCATCTTGCGGCTGTTGCGAGCCACGATGCGGCCCAGAAAGCGTTTaGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTGCCAGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSCGCCEPRCGPESV*PSCQGSPVAECQLA Trigger: GGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | GCCGAGTGCCAGCTTGCCGCCGGGCGTTATCTTCTTTGCTGTCCCTaGGCAGGCGTATCTGGCGCACAACCCCCTCGAATAGTGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AECQLAAGRYLLCCP*AGVSGAQPPRIVPG Trigger: TCCAGGCACTATTCGAGGGGGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | TCTCCCGTCGCCGAGTGCCAGCTTGCCGCCGGGCGTTATCTTCTTTaGTGTCCCTGCGCAGGCGTATCTGGCGCACAACCCCCTCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: SPVAECQLAAGRYLL*CPCAGVSGAQPPRI Trigger: TATTCGAGGGGGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | CGTTTGGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTGCCAGCTTaGCGCCGGGCGTTATCTTCTTTGCTGTCCCTGCGCAGGCGTATC | + |
|
Preference number: 5 (lower is better) Translates to: RLAFLPRLSRRRVPA*RRALSSLLSLRRRI Trigger: GATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | TGGACTTGGCGCGGAAGGCCATCTTGCGGCTGTTGCGAGCCACGATaGGGCCCAGAAAGCGTTTGGCCTTCTTGCCAAGGCTCTCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: WTWRGRPSCGCCEPR*GPESVWPSCQGSPV Trigger: GACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCGCCAAGTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | GCCCTGCTGCTTCTGCTTCAGGTCCGTCTTCTATACCACCAAAGATaGGCGCCAGAGCGCTTTTGCCCACACCAGGCGCCCCGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLLLLQVRLLYHQR*APERFCPHQAPRAA Trigger: TGCTGCTCGGGGCGCCTGGTGTGGGCAAAAGCGCTCTGGCGCGCATCTTTGGTGGTATAGAAGACGGACCTGAAGCAGAAGCAGCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | CCAGAAAGCGTTTGGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTaGCAGCTTGCCGCCGGGCGTTATCTTCTTTGCTGTCCCTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PESVWPSCQGSPVAE*QLAAGRYLLCCPCA Trigger: TGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | CAGGTCCGTCTTCTATACCACCAAAGATGCGCGCCAGAGCGCTTTTaGCCACACCAGGCGCCCCGAGCAGCAGCACCTTGTAAACGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVRLLYHQRCAPERF*PHQAPRAAAPCKRP Trigger: AGGGCGTTTACAAGGTGCTGCTGCTCGGGGCGCCTGGTGTGGGCAAAAGCGCTCTGGCGCGCATCTTTGGTGGTATAGAAGACGGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | CATGGCAGGACTTGGACTTGGCGCGGAAGGCCATCTTGCGGCTGTTaGGAGCCACGATGCGGCCCAGAAAGCGTTTGGCCTTCTTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HGRTWTWRGRPSCGC*EPRCGPESVWPSCQ Trigger: TTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCGCCAAGTCCAAGTCCTGCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATGCCACCACGGCTCCCGCTaGCTCCGCTGCCACCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSTSWVQAAWYACGPAQCHHGSR*LRCHHS Trigger: TGAATGGTGGCAGCGGAGCAAGCGGGAGCCGTGGTG...GCATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR CAA 90 bp | TGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCAGGTCATGGCAGGACTaGGACTTGGCGCGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WYACGPAQCISMGLGLSGRSWQD*DLARKA Trigger: GGCCTTCCGCGCCAAGTCCAAGTCCTGCCATGACCT...GCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCGGGCGTTATCTTCTTaGCTGTCCCTGCGCAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LVCMWACTMHLHGPRPLWRALSS*LSLRRR Trigger: ACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCG...CCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTAAGCGTTTGGCCTTCTaGCCAAGGCTCTCCCGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AWYACGPAQCISMGLGLSKRLAF*PRLSRR Trigger: GCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTT...AGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR CAA 90 bp | GACACCCGCATAGAGAAAGGCAGAGTCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGCAGGACTTGGACTaGGCGCGGAAGGCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DTRIEKGRVLSTSWVQAAWQDLD*ARKAIL Trigger: CAAGATGGCCTTCCGCGCCAAGTCCAAGTCCTGCCA...AGCAGCCTGAACCCAGCTTGTGGACAGGACTCTGCCTTTCTCTATGCGGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR CAA 90 bp | TGGTATGCATGTGGGCCTGCACAATGCATCTCCATGGGCCTAGGCCTCTCTGGCACCAGGTCACTCTTGTaGCCCACGAGAATGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WYACGPAQCISMGLGLSGTRSLL*PTRMMG Trigger: GCCCATCATTCTCGTGGGCAACAAGAGTGACCTGGT...GCCAGAGAGGCCTAGGCCCATGGAGATGCATTGTGCAGGCCCACATGCATACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CAA 90 bp | ATATTGAACAGCCTCCCTCCAGGGCACAGACACCCGCATAGAGAAAGGCAGAGTCGGCCCAGAAAGCGTTaGGCCTTCTTGCCAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILNSLPPGHRHPHRERQSRPRKR*AFLPRL Trigger: GAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCG...ACTCTGCCTTTCTCTATGCGGGTGTCTGTGCCCTGGAGGGAGGCTGTTCAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCATGTAAACAAACAGCAACCATATTGAACAGCCTCCCTCCAGGGCACAGAGCCATCTTGCGGCTGTaGCGAGCCACGATGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SACKQTATILNSLPPGHRAILRL*RATMRP Trigger: GGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGC...TCTGTGCCCTGGAGGGAGGCTGTTCAATATGGTTGCTGTTTGTTTACATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS-3UTR CAA 90 bp | TCCTGTCCACAAGCTGGGTTCAGGCTGCTTGGTATGCATGTGGGCCTGCACAATTTCTCAAAGCTGCCCTaGTCCGTGATGGAGTACACG | + |
|
Preference number: 5 (lower is better) Translates to: SCPQAGFRLLGMHVGLHNFSKLP*SVMEYT Trigger: CGTGTACTCCATCACGGACAAGGGCAGCTTTGAGAA...ATTGTGCAGGCCCACATGCATACCAAGCAGCCTGAACCCAGCTTGTGGACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS GCA 90 bp | TCCATCCACAGTGATAGAACGGTCATATGTGTGCCCTGCTGCTTCTaGTTCAGGTCCGTCTTCTATACCACCAAAGATGCGCGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SIHSDRTVICVPCCF*FRSVFYTTKDARQS Trigger: GCTCTGGCGCGCATCTTTGGTGGTATAGAAGACGGACCTGAAGCAGAAGCAGCAGGGCACACATATGACCGTTCTATCACTGTGGATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS GCA 90 bp | TTCTTCTCCATCCACAGTGATAGAACGGTCATATGTGTGCCCTGCTaGTTCTGCTTCAGGTCCGTCTTCTATACCACCAAAGATGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FFSIHSDRTVICVPC*FCFRSVFYTTKDAR Trigger: GCGCGCATCTTTGGTGGTATAGAAGACGGACCTGAAGCAGAAGCAGCAGGGCACACATATGACCGTTCTATCACTGTGGATGGAGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 90 bp | AGTGACGCTTCTTCTCCATCCACAGTGATAGAACGGTCATATGTGTaGCCTGCTGCTTCTGCTTCAGGTCCGTCTTCTATACCACCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SDASSPSTVIERSYV*PAASASGPSSIPPK Trigger: CTTTGGTGGTATAGAAGACGGACCTGAAGCAGAAGCAGCAGGGCACACATATGACCGTTCTATCACTGTGGATGGAGAAGAAGCGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CCA 72 bp | CATGCTCCTGCGGTGCAGTGGGGGTGCCGGGCCCCATaGGGTGCTGCCTCGACGGCGGTCGCGCTCCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HAPAVQWGCRAP*GAASTAVALPA Trigger: GGCCGGGAGCGCGACCGCCGTCGAGGCAGCACCCCATGGGGCCCGGCACCCCCACTGCACCGCAGGAGCATG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
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| CDS TCA 72 bp | GCAGTCGTTGCCAGGGAGCCCGGGGCTAGCGCCGCCTaGAGGTCTCGCTCGTCCACCGGCATGCTCCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AVVAREPGASAA*RSRSSTGMLLR Trigger: CCGCAGGAGCATGCCGGTGGACGAGCGAGACCTTCAGGCGGCGCTAGCCCCGGGCTCCCTGGCAACGACTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS GCA 72 bp | CTAGCGCCGCCTGAAGGTCTCGCTCGTCCACCGGCATaGTCCTGCGGTGCAGTGGGGGTGCCGGGCCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LAPPEGLARPPA*SCGAVGVPGPM Trigger: CATGGGGCCCGGCACCCCCACTGCACCGCAGGAGCATGCCGGTGGACGAGCGAGACCTTCAGGCGGCGCTAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS CAA 72 bp | GCCTCTGGCCCTGTGTCCGAGTTCCAGCGGCAGTCGTaGCCAGGGAGCCCGGGGCTAGCGCCGCCTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGPVSEFQRQS*PGSPGLAPPEG Trigger: ACCTTCAGGCGGCGCTAGCCCCGGGCTCCCTGGCAACGACTGCCGCTGGAACTCGGACACAGGGCCAGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS CAA 90 bp | GCCAGTCCAGCCTCTGGCCCTGTGTCCGAGTTCCAGCGGCAGTCGTaGCCAGGGAGCCCGGGGCTAGCGCCGCCTGAAGGTCTCGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASPASGPVSEFQRQS*PGSPGLAPPEGLAR Trigger: ACGAGCGAGACCTTCAGGCGGCGCTAGCCCCGGGCTCCCTGGCAACGACTGCCGCTGGAACTCGGACACAGGGCCAGAGGCTGGACTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS CAA 90 bp | CGGCTGTTGCGAGCCACGATGCGGCCCAGAAAGCGTTTGGCCTTCTaGCCAAGGCTCTCCCGTCGCCGAGTGCCAGCTTGCCGCCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLLRATMRPRKRLAF*PRLSRRRVPACRRA Trigger: CGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CCA 72 bp | AGCGAGTCGGAGGAGCCTTCGGGCCAGTCCAGCCTCTaGCCCTGTGTCCGAGTTCCAGCGGCAGTCGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SESEEPSGQSSL*PCVRVPAAVVA Trigger: GGCAACGACTGCCGCTGGAACTCGGACACAGGGCCAGAGGCTGGACTGGCCCGAAGGCTCCTCCGACTCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034351.8 ENSMUST00000212163.2 |
||
| CDS GCA 72 bp | GCCGAGTGCCAGCTTGCCGCCGGGCGTTATCTTCTTTaGTGTCCCTGCGCAGGCGTATCTGGCGCACAACCC | + |
|
Preference number: 6 (lower is better) Translates to: AECQLAAGRYLL*CPCAGVSGAQP Trigger: GGGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 72 bp | GAGCCACGATGCGGCCCAGAAAGCGTTTGGCCTTCTTaGCAAGGCTCTCCCGTCGCCGAGTGCCAGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPRCGPESVWPS*QGSPVAECQLA Trigger: GGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CCA 72 bp | GGCTGTTGCGAGCCACGATGCGGCCCAGAAAGCGTTTaGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCCEPRCGPESV*PSCQGSPVAEC Trigger: GCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CAA 72 bp | CGCCGAGTGCCAGCTTGCCGCCGGGCGTTATCTTCTTaGCTGTCCCTGCGCAGGCGTATCTGGCGCACAACC | + |
|
Preference number: 6 (lower is better) Translates to: RRVPACRRALSS*LSLRRRIWRTT Trigger: GGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CAA 72 bp | CGAGCCACGATGCGGCCCAGAAAGCGTTTGGCCTTCTaGCCAAGGCTCTCCCGTCGCCGAGTGCCAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RATMRPRKRLAF*PRLSRRRVPAC Trigger: GCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CAA 72 bp | CGGCTGTTGCGAGCCACGATGCGGCCCAGAAAGCGTTaGGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLRATMRPRKR*AFLPRLSRRRV Trigger: CACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CAA 90 bp | CTCTCCCGTCGCCGAGTGCCAGCTTGCCGCCGGGCGTTATCTTCTTaGCTGTCCCTGCGCAGGCGTATCTGGCGCACAACCCCCTCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSRRRVPACRRALSS*LSLRRRIWRTTPSN Trigger: ATTCGAGGGGGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CAA 90 bp | GCCATCTTGCGGCTGTTGCGAGCCACGATGCGGCCCAGAAAGCGTTaGGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTGCCAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AILRLLRATMRPRKR*AFLPRLSRRRVPAC Trigger: GCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 72 bp | CGCGGAAGGCCATCTTGCGGCTGTTGCGAGCCACGATaGGGCCCAGAAAGCGTTTGGCCTTCTTGCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRPSCGCCEPR*GPESVWPSCQG Trigger: GCCTTGGCAAGAAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS GCA 72 bp | CATGGCAGGACTTGGACTTGGCGCGGAAGGCCATCTTaGGGCTGTTGCGAGCCACGATGCGGCCCAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HGRTWTWRGRPS*GCCEPRCGPES Trigger: GCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCGCCAAGTCCAAGTCCTGCCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
||
| CDS CAA 72 bp | GACTTGGACTTGGCGCGGAAGGCCATCTTGCGGCTGTaGCGAGCCACGATGCGGCCCAGAAAGCGTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: DLDLARKAILRL*RATMRPRKRLA Trigger: GGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCGCCAAGTCCAAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS CAA 90 bp | GCGTTTGGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTGCCAGCTaGCCGCCGGGCGTTATCTTCTTTGCTGTCCCTGCGCAGGCGTAT | + |
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Preference number: 6 (lower is better) Translates to: AFGLLAKALPSPSAS*PPGVIFFAVPAQAY Trigger: ATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS GCA 72 bp | ACTTGGACTTGGCGCGGAAGGCCATCTTGCGGCTGTTaGGAGCCACGATGCGGCCCAGAAAGCGTTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TWTWRGRPSCGC*EPRCGPESVWP Trigger: AGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGATGGCCTTCCGCGCCAAGTCCAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS GCA 72 bp | GCTGCCCTTGTCCGTGATGGAGTACACGATGACGTATaGATCCCCCATGGCCATGCAGTGGCCAGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: AALVRDGVHDDV*IPHGHAVARQP Trigger: TGGCTGCCTGGCCACTGCATGGCCATGGGGGATGCATACGTCATCGTGTACTCCATCACGGACAAGGGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS GCA 72 bp | CAGCTTGCCGCCGGGCGTTATCTTCTTTGCTGTCCCTaGGCAGGCGTATCTGGCGCACAACCCCCTCGAATA | + |
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Preference number: 6 (lower is better) Translates to: QLAAGRYLLCCP*AGVSGAQPPRI Trigger: TATTCGAGGGGGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAGATAACGCCCGGCGGCAAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS GCA 72 bp | GTTTGGCCTTCTTGCCAAGGCTCTCCCGTCGCCGAGTaGCAGCTTGCCGCCGGGCGTTATCTTCTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VWPSCQGSPVAE*QLAAGRYLLCC Trigger: ACAGCAAAGAAGATAACGCCCGGCGGCAAGCTGGCACTCGGCGACGGGAGAGCCTTGGCAAGAAGGCCAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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| CDS CCA 72 bp | GCGTTATCTTCTTTGCTGTCCCTGCGCAGGCGTATCTaGCGCACAACCCCCTCGAATAGTGCCTGGACATTG | + |
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Preference number: 6 (lower is better) Translates to: ALSSLLSLRRRI*RTTPSNSAWTL Trigger: CAATGTCCAGGCACTATTCGAGGGGGTTGTGCGCCAGATACGCCTGCGCAGGGACAGCAAAGAAGATAACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034351.8 |
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