Pregenerated sensors for RPUSD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051169Ensembl transcript IDs: ENSMUST00000060634.14, ENSMUST00000113092.9, ENSMUST00000129047.8, ENSMUST00000129560.2, ENSMUST00000147726.8, ENSMUST00000151618.8
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTaGGATTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: EKSPAQCHTAITWPL*DLILVCQTKEPRGL Trigger: AAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| 3UTR CCA 90 bp | AAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTaGCCTCTCTGGGATTTGATCTTAGTTTGTCAGACCAAGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: KSREKSPAQCHTAIT*PLWDLILVCQTKEP Trigger: GGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| 3UTR CCA 90 bp | TGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTaGGGTCAGGCACAGTCTACTGTTGAGAGAGCCGAAGGCACTGCA | + |
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Preference number: 1 (lower is better) Translates to: CSAPTPLALFFLFSI*GQAQSTVERAEGTA Trigger: TGCAGTGCCTTCGGCTCTCTCAACAGTAGACTGTGCCTGACCCCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| 3UTR CCA 90 bp | CTGGGATTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTTaGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTT | + |
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Preference number: 1 (lower is better) Translates to: LGFDLSLSDQGAQGP*LCSAPTPLALFFLF Trigger: AAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGACCTGGATCCGGTGCCTaGGAGGAGGAGGCGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: QREVTCPVPHSNHVASLGPGSGA*EEEAVK Trigger: CTTCACCGCCTCCTCCTCCCAGGCACCGGATCCAGG...TCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| 3UTR CAA 90 bp | TCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATTaGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SPAQCHTAITWPLWD*ILVCQTKEPRGLGC Trigger: ACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAGACCAGGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGGGGAGGAGGAGGCGGTaGAGGTGCAGGTGCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TRPGGRTFIKSREKSPAQGRRRR*RCRCKG Trigger: GCCTTTGCACCTGCACCTTCACCGCCTCCTCCTCCC...CTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCCTGGTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATTTAGGTGCAAAGGCATCTaGGCCACTTGGGAAGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: REVTCPVPHSNHVASLGFRCKGI*ATWEGL Trigger: AAGTCCTTCCCAAGTGGCCCAGATGCCTTTGCACCT...AAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| 3UTR-3UTR CCA 90 bp | GAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCATTCCTATTTTCCATCTaGGGTCAGGCACAGTCTACT | + |
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Preference number: 2 (lower is better) Translates to: ELLLSPERSHLPSATQQSFLFSI*GQAQST Trigger: AGTAGACTGTGCCTGACCCCAGATGGAAAATAGGAA...TGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| 3UTR TCA 72 bp | CCTATTTTCCATCTGGGGTCAGGCACAGTCTACTGTTaGGAGAGCCGAAGGCACTGCAGGGTCCGAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PIFHLGSGTVYC*ESRRHCRVREK Trigger: CTTCTCTCGGACCCTGCAGTGCCTTCGGCTCTCTCAACAGTAGACTGTGCCTGACCCCAGATGGAAAATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| 3UTR GCA 72 bp | AGTTTGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGTaGTCAGCACCAACTCCACTCGCCTTATTCTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLSDQGAQGPWL*SAPTPLALFFL Trigger: TAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| 3UTR CCA 72 bp | GAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTaGCCTCTCTGGGATTTGATCTTAGTTTGTCAGACC | + |
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Preference number: 3 (lower is better) Translates to: EKSPAQCHTAIT*PLWDLILVCQT Trigger: GGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | GGCGGTGAAGGTGCAGGTGCAAAGGCATCTGGGCCACTTGGGAAGGACTTAGGCACCTGCAGCTGTCAGTaGCTGCAGCTGGACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGEGAGAKASGPLGKDLGTCSCQ*LQLDQG Trigger: GCCCTGGTCCAGCTGCAGCCACTGACAGCTGCAGGT...GCCTAAGTCCTTCCCAAGTGGCCCAGATGCCTTTGCACCTGCACCTTCACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| CDS-3UTR CCA 90 bp | GAAGGTGCAGGTGCAAAGGCATCTGGGCCACTTGGGAAGGACTTAGGCGGAGGTCTTGGTGGTCTCGGCTaGCCACAGAAAGCGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: EGAGAKASGPLGKDLGGGLGGLG*PQKALA Trigger: GGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAG...ACCTCCGCCTAAGTCCTTCCCAAGTGGCCCAGATGCCTTTGCACCTGCACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| CDS-3UTR GCA 90 bp | CAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGAGCTGGCCCAGAACGGTaGCCACACGAGCAGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: QREVTCPVPHSNHVASLGAGPER*PHEQHK Trigger: CTTATGCTGCTCGTGTGGGCACCGTTCTGGGCCAGC...TCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR GCA 90 bp | AGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATGCTGGCCCAGAACGGTaGCCACACGAGCAGCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: REKSPAQCHTAITWPLWDAGPER*PHEQHK Trigger: CTTATGCTGCTCGTGTGGGCACCGTTCTGGGCCAGC...ATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | TTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGTGCTCAGCAGTCAGTGGCTGCAGCTaGACCAGGGCACAGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: FDLSLSDQGAQGPWLCSAVSGCS*TRAQPR Trigger: CCGTGGCTGTGCCCTGGTCCAGCTGCAGCCACTGAC...TGCTGAGCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGGTCAGTGGCTGCAGCTaGACCAGGGCACAGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKVSGCS*TRAQPR Trigger: CCGTGGCTGTGCCCTGGTCCAGCTGCAGCCACTGAC...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR CCA 90 bp | GTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGCCTCTTGGTGGTCTCGGCTaGCCACAGAAAGCGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VRTCNVSFHHLQLMDKRPLGGLG*PQKALA Trigger: GGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAG...AGGCCTCTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR CCA 90 bp | GTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGCCTGGGGAAGACTGTCAGTaGCTGCAGCTGGACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VRTCNVSFHHLQLMDKRPGEDCQ*LQLDQG Trigger: GCCCTGGTCCAGCTGCAGCCACTGACAGTCTTCCCC...AGGCCTCTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR TCA 90 bp | AGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTTTAGGCGGAGGTGTCTaGGCAGGGCTTCATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPERSHLPSATQQSRGLSLGGGV*AGLHPG Trigger: TCCTGGATGAAGCCCTGCTCAGACACCTCCGCCTAA...AGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
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| CDS-3UTR GCA 90 bp | AGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATTTCTTCTGCAGGCGGCTTaGTGTCTGGGGACAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: REVTCPVPHSNHVASLGFLLQAA*CLGTAG Trigger: TCCAGCTGTCCCCAGACAGCAAGCCGCCTGCAGAAG...AAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | GTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGGGTCATCGAGCCCCAGGGCCTaGCTCAGCTGCGGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: VLSTNSTRLILPIFHLGSSSPRA*LSCGST Trigger: TGTGCTGCCGCAGCTGAGCCAGGCCCTGGGGCTCGA...TGACCCCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGCGGCTTGCTGTCTaGGGACAGCTGGAGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKRRLAV*GQLERS Trigger: GCTCCTCTCCAGCTGTCCCCAGACAGCAAGCCGCCT...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR CCA 90 bp | TTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGTGCTCAGCACTTGGTGGTCTCGGCTaGCCACAGAAAGCGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FDLSLSDQGAQGPWLCSALGGLG*PQKALA Trigger: GGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAG...TGCTGAGCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR GCA 90 bp | ACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATTTGATCTTAGTCTTCTGCAGGCGGCTTaGTGTCTGGGGACAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TCPVPHSNHVASLGFDLSLLQAA*CLGTAG Trigger: TCCAGCTGTCCCCAGACAGCAAGCCGCCTGCAGAAG...ACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR GCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGGCTGGCCCAGAACGGTaGCCACACGAGCAGCATAAG | + |
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Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKAGPER*PHEQHK Trigger: CTTATGCTGCTCGTGTGGGCACCGTTCTGGGCCAGC...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR CCA 90 bp | TTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGTGCTCAGCACAGCGTCAGCTCTCCTaGTCTCCCTGTCACAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FDLSLSDQGAQGPWLCSAQRQLS*SPCHRQ Trigger: CTGCCTGTGACAGGGAGACCAGGAGAGCTGACGCTG...TGCTGAGCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | AACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGCAGCGTCAGCTCTCCTaGTCTCCCTGTCACAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NVRTCNVSFHHLQLMDKRQRQLS*SPCHRQ Trigger: CTGCCTGTGACAGGGAGACCAGGAGAGCTGACGCTG...CCTCTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACATCGAGCCCCAGGGCCTaGCTCAGCTGCGGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: GGRTFIKSREKSPAQCHTSSPRA*LSCGST Trigger: TGTGCTGCCGCAGCTGAGCCAGGCCCTGGGGCTCGA...TGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | AGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTCCTGTGGCCATCACATaGAAACGGCTGAGGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SPERSHLPSATQQSRGLSPVAIT*KRLRVL Trigger: AAGGACCCTCAGCCGTTTCCATGTGATGGCCACAGG...AGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGGTCTCTGGGGCTTGGTaGTCTCGGCTGGCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKVSGAW*SRLATE Trigger: TTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGAC...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR TCA 90 bp | GGGGCCTTGGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCACCAGAGGTCCTTTCTaGTCCACCACAGCTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GALAVLSTNSTRLILPIFTRGPF*STTAAL Trigger: GAGGGCAGCTGTGGTGGATCAGAAAGGACCTCTGGT...GAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAAGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR TCA 90 bp | GGATTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGTGCTCAACCAGAGGTCCTTTCTaGTCCACCACAGCTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GFDLSLSDQGAQGPWLCSTRGPF*STTAAL Trigger: GAGGGCAGCTGTGGTGGATCAGAAAGGACCTCTGGT...TGAGCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR TCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGACCAGAGGTCCTTTCTaGTCCACCACAGCTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKTRGPF*STTAAL Trigger: GAGGGCAGCTGTGGTGGATCAGAAAGGACCTCTGGT...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR TCA 90 bp | TTGGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGGGAGGAGGAGGCGGTaGAGGTGCAGGTGCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LAVLSTNSTRLILPIFHLGRRRR*RCRCKG Trigger: GCCTTTGCACCTGCACCTTCACCGCCTCCTCCTCCC...CAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
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| CDS-3UTR GCA 90 bp | AACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGCTGATCCACCACAGCTaGCCTCAGGACATGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NVRTCNVSFHHLQLMDKRLIHHS*PQDMSQ Trigger: CTGGCTCATGTCCTGAGGGCAGCTGTGGTGGATCAG...CCTCTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS-3UTR CCA 90 bp | TTGGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGTCAGTGGCTGCAGCTaGACCAGGGCACAGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: LAVLSTNSTRLILPIFHLVSGCS*TRAQPR Trigger: CCGTGGCTGTGCCCTGGTCCAGCTGCAGCCACTGAC...CAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | CCAGGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACGGGGAAGACTGTCAGTaGCTGCAGCTGGACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PGGRTFIKSREKSPAQCHGEDCQ*LQLDQG Trigger: GCCCTGGTCCAGCTGCAGCCACTGACAGTCTTCCCC...GTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | GAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCCTGGATCCGGTGCCTaGGAGGAGGAGGCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: EVELLLSPERSHLPSATQPGSGA*EEEAVK Trigger: CTTCACCGCCTCCTCCTCCCAGGCACCGGATCCAGG...CTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
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| 3UTR CAA 72 bp | AGCAATCACGTGGCCTCTCTGGGATTTGATCTTAGTTaGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SNHVASLGFDLS*SDQGAQGPWLC Trigger: GCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| 3UTR CAA 72 bp | CAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATTaGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QCHTAITWPLWD*ILVCQTKEPRG Trigger: GCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR GCA 90 bp | GCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGGGTCAGGCTGATCCACCACAGCTaGCCTCAGGACATGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: AQHQLHSPYSSYFPSGVRLIHHS*PQDMSQ Trigger: CTGGCTCATGTCCTGAGGGCAGCTGTGGTGGATCAG...CCTGACCCCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | ACCAGACCAGGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGAGGCGGCTTGCTGTCTaGGGACAGCTGGAGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TRPGGRTFIKSREKSPAQRRLAV*GQLERS Trigger: GCTCCTCTCCAGCTGTCCCCAGACAGCAAGCCGCCT...CTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCCTGGTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS-3UTR CCA 90 bp | GAAGGTGCAGGTGCAAAGGCATCTGGGCCACTTGGGAAGGACTTAGGCGGAGGTCTTTTGACACCTTCCTaGATGTCCTTTCGAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: EGAGAKASGPLGKDLGGGLLTPS*MSFRDG Trigger: CCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAG...ACCTCCGCCTAAGTCCTTCCCAAGTGGCCCAGATGCCTTTGCACCTGCACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGCCTGTGGCCATCACATaGAAACGGCTGAGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKPVAIT*KRLRVL Trigger: AAGGACCCTCAGCCGTTTCCATGTGATGGCCACAGG...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATGTCTCTGGGGCTTGGTaGTCTCGGCTGGCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALAVLSTNSTRLILPIFHVSGAW*SRLATE Trigger: TTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGAC...ATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGGGTGTCTCTGGGGCTTGGTaGTCTCGGCTGGCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCSAPTPLALFFLFSIWGVSGAW*SRLATE Trigger: TTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGAC...ACCCCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGCAGAGAGCAGGCATATaGGACAGGGGACCTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKQRAGI*DRGPTC Trigger: ACAGGTAGGTCCCCTGTCCCATATGCCTGCTCTCTG...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGGCAGACTGTCCCCTCTaGAGGCTCAGGGATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EVELLLSPERSHLPSATQADCPL*RLRDAI Trigger: GATGGCATCCCTGAGCCTTCAGAGGGGACAGTCTGC...CTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGACCAGGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGGCAGACTGTCCCCTCTaGAGGCTCAGGGATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TRPGGRTFIKSREKSPAQADCPL*RLRDAI Trigger: GATGGCATCCCTGAGCCTTCAGAGGGGACAGTCTGC...CTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCCTGGTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR GCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGCCATCTTCAGAGGCATaGAGACTGTCCCCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKPSSEA*RLSPLK Trigger: CTTCAGAGGGGACAGTCTGCATGCCTCTGAAGATGG...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGTAAGGGGGCAGGGGTaGCAGAAGTTCACTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRTFIKSREKSPAQCHTVRGQG*QKFTRG Trigger: CCCCCTAGTGAACTTCTGGCACCCCTGCCCCCTTAC...TGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGCAGCGTCAGCTCTCCTaGTCTCCCTGTCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAVLSTNSTRLILPIFHLQRQLS*SPCHRQ Trigger: CTGCCTGTGACAGGGAGACCAGGAGAGCTGACGCTG...CAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAAAGGCGGCTTGCTGTCTaGGGACAGCTGGAGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VELLLSPERSHLPSATQQRRLAV*GQLERS Trigger: GCTCCTCTCCAGCTGTCCCCAGACAGCAAGCCGCCT...TTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGGATGTCCTTTCGAGATaGGGACATCACTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKDVLSR*GHHWDC Trigger: GCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATC...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGGTACCTGCAGCTGATTaGGGAAGACTGTCAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKVPAAD*GRLSVA Trigger: AGCCACTGACAGTCTTCCCCAATCAGCTGCAGGTAC...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS-3UTR GCA 90 bp | TTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCCATCTTCAGAGGCATaGAGACTGTCCCCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSPERSHLPSATQQSRGPSSEA*RLSPLK Trigger: CTTCAGAGGGGACAGTCTGCATGCCTCTGAAGATGG...GCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGATTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGCCTTGGCTGTGCCTTTTGACACCTTCCTaGATGTCCTTTCGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFDLSLSDQGAQGPWLCLLTPS*MSFRDG Trigger: CCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAG...GCACAGCCAAGGCCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGCCTCTTTTGACACCTTCCTaGATGTCCTTTCGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTCNVSFHHLQLMDKRPLLTPS*MSFRDG Trigger: CCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAG...AGGCCTCTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGGGTCAGCCTGTGGCCATCACATaGAAACGGCTGAGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSAPTPLALFFLFSIWGQPVAIT*KRLRVL Trigger: AAGGACCCTCAGCCGTTTCCATGTGATGGCCACAGG...CTGACCCCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGGGTCAGGGTACCTGCAGCTGATTaGGGAAGACTGTCAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQHQLHSPYSSYFPSGVRVPAAD*GRLSVA Trigger: AGCCACTGACAGTCTTCCCCAATCAGCTGCAGGTAC...CCTGACCCCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
||
| CDS-3UTR GCA 90 bp | GTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAACTGATCCACCACAGCTaGCCTCAGGACATGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VELLLSPERSHLPSATQQLIHHS*PQDMSQ Trigger: CTGGCTCATGTCCTGAGGGCAGCTGTGGTGGATCAG...TTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATTTGATCTTAGTTTGTCACCATCTTCAGAGGCATaGAGACTGTCCCCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVPHSNHVASLGFDLSLSPSSEA*RLSPLK Trigger: CTTCAGAGGGGACAGTCTGCATGCCTCTGAAGATGG...TGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTGGCCTCTCTGGGATTTTGTGCTCTCCTTGAGTaGATAAAGAACTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REVTCPVPHSNHVASLGFCALLE*IKNFCR Trigger: CCTGCAGAAGTTCTTTATCCACTCAAGGAGAGCACA...AAATCCCAGAGAGGCCACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCCATCTGGGATGTCCTTTCGAGATaGGGACATCACTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLCSAPTPLALFFLFSIWDVLSR*GHHWDC Trigger: GCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATC...CCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | TGGAACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGTGTGCTCTCCTTGAGTaGATAAAGAACTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNVRTCNVSFHHLQLMDKCALLE*IKNFCR Trigger: CCTGCAGAAGTTCTTTATCCACTCAAGGAGAGCACA...CTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGGATGTCCTTTCGAGATaGGGACATCACTGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVELLLSPERSHLPSATQDVLSR*GHHWDC Trigger: GCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATC...CTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGACCAGGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGAGGTGCAAAGGCATCTaGGCCACTTGGGAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TRPGGRTFIKSREKSPAQRCKGI*ATWEGL Trigger: AAGTCCTTCCCAAGTGGCCCAGATGCCTTTGCACCT...CTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCCTGGTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
||
| CDS-3UTR CCA 90 bp | GTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATGTGCTCTCCTTGAGTaGATAAAGAACTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VELLLSPERSHLPSATQQCALLE*IKNFCR Trigger: CCTGCAGAAGTTCTTTATCCACTCAAGGAGAGCACA...TTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS GCA 90 bp | GTCCTCAGCAGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTTGTaGTTGCGGGCCTCGGTGCCGAAGCCGGCATCCCTCTGCCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLSSPGKGWSSTRSL*LRASVPKPASLCRA Trigger: CGCACGGCAGAGGGATGCCGGCTTCGGCACCGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGAGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
||
| CDS GCA 90 bp | TCAGCAGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTTGTGCTTaGGGGCCTCGGTGCCGAAGCCGGCATCCCTCTGCCGTGCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAAPGRAGPRLGPCA*GPRCRSRHPSAVRK Trigger: CTTGCGCACGGCAGAGGGATGCCGGCTTCGGCACCGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
||
| CDS CCA 90 bp | GCAGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTTGTGCTTGCTaGAGCGGTGAGGTTGAGACGGACGCCGGGCCTCGGTGCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AAPGRAGPRLGPCAC*SGEVETDAGPRCRS Trigger: GCTTCGGCACCGAGGCCCGGCGTCCGTCTCAACCTCACCGCTCCAGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000129560.2 ENSMUST00000151618.8 |
||
| CDS GCA 90 bp | TCAGCAGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTTGTGCTTaGTGGAGCGGTGAGGTTGAGACGGACGCCGGGCCTCGGTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SAAPGRAGPRLGPCA*WSGEVETDAGPRCR Trigger: TCGGCACCGAGGCCCGGCGTCCGTCTCAACCTCACCGCTCCAGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000129560.2 ENSMUST00000151618.8 |
||
| CDS CCA 90 bp | TCCTCCAGGCCGAGGTTCTCCGTCCTCAGCAGCCCCGGGAAGGGCTaGTCCTCGACTAGGTCCTTGTGCTTGCGGGCCTCGGTGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRPRFSVLSSPGKG*SSTRSLCLRASVPK Trigger: CTTCGGCACCGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGAGGACGGAGAACCTCGGCCTGGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
||
| CDS GCA 90 bp | GGGACAGCTGGAGAGGAGCACAAGTCCGGAGGCCTCCTTCCCAGGTaGTCGCACAACCTGGAGCTCCTGGTGTTCGAGCCCCAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTAGEEHKSGGLLPR*SHNLELLVFEPQGL Trigger: CAGGCCCTGGGGCTCGAACACCAGGAGCTCCAGGTTGTGCGAGCACCTGGGAAGGAGGCCTCCGGACTTGTGCTCCTCTCCAGCTGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
||
| CDS CCA 90 bp | GGTGCTCGCACAACCTGGAGCTCCTGGTGTTCGAGCCCCAGGGCCTaGCTCAGCTGCGGCAGCACAGATAGCAGCGTCAGCTCTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GARTTWSSWCSSPRA*LSCGSTDSSVSSPG Trigger: ACCAGGAGAGCTGACGCTGCTATCTGTGCTGCCGCAGCTGAGCCAGGCCCTGGGGCTCGAACACCAGGAGCTCCAGGTTGTGCGAGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
||
| CDS CCA 90 bp | CAGGGCTTCATCCAGGACCTGTCTCTGGGGCTTGGTGGTCTCGGCTaGCCACAGAAAGCGCTGGCCCAGAACGGTGCCCACACGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGFIQDLSLGLGGLG*PQKALAQNGAHTSS Trigger: GCTGCTCGTGTGGGCACCGTTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGACAGGTCCTGGATGAAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113092.9 |
||
| CDS CCA 90 bp | ATGGGACAGGGGACCTACCTGTCTCTGGGGCTTGGTGGTCTCGGCTaGCCACAGAAAGCGCTGGCCCAGAACGGTGCCCACACGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MGQGTYLSLGLGGLG*PQKALAQNGAHTSS Trigger: GCTGCTCGTGTGGGCACCGTTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGACAGGTAGGTCCCCTGTCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS CCA 90 bp | GAGCAGGCATATGGGACAGGGGACCTACCTGTCTCTGGGGCTTGGTaGTCTCGGCTGGCCACAGAAAGCGCTGGCCCAGAACGGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EQAYGTGDLPVSGAW*SRLATESAGPERCP Trigger: TGGGCACCGTTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGACAGGTAGGTCCCCTGTCCCATATGCCTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS CCA 90 bp | AGAGAGCAGGCATATGGGACAGGGGACCTACCTGTCTCTGGGGCTTaGTGGTCTCGGCTGGCCACAGAAAGCGCTGGCCCAGAACGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: REQAYGTGDLPVSGA*WSRLATESAGPERC Trigger: GCACCGTTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGACAGGTAGGTCCCCTGTCCCATATGCCTGCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS GCA 90 bp | AGAGGAGCACAAGTCCGGAGGCCTCCCTTTCTGATCCACCACAGCTaGCCTCAGGACATGAGCCAGCTCCTCCAGGCCGAGGTTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RGAQVRRPPFLIHHS*PQDMSQLLQAEVLR Trigger: ACGGAGAACCTCGGCCTGGAGGAGCTGGCTCATGTCCTGAGGGCAGCTGTGGTGGATCAGAAAGGGAGGCCTCCGGACTTGTGCTCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129560.2 |
||
| CDS CCA 90 bp | AACCCACAGAGAGCAGGCATATGGGACAGGGGACCTACCTGTCTCTaGGGCTTGGTGGTCTCGGCTGGCCACAGAAAGCGCTGGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPQRAGIWDRGPTCL*GLVVSAGHRKRWPR Trigger: TCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGACAGGTAGGTCCCCTGTCCCATATGCCTGCTCTCTGTGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS GCA 90 bp | TTGGACAGAGCTGTAGAGCCATGTGTACCTGCAGCTGTCAGTGGCTaGAGCTGGACCAGGGCACAGCCACGGCCTGTGGCCATCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LDRAVEPCVPAAVSG*SWTRAQPRPVAITW Trigger: CCATGTGATGGCCACAGGCCGTGGCTGTGCCCTGGTCCAGCTGCAGCCACTGACAGCTGCAGGTACACATGGCTCTACAGCTCTGTCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
||
| CDS CCA 90 bp | AGAGCTGTAGAGCCATGTGTACCTGCAGCTGTCAGTGGCTGCAGCTaGACCAGGGCACAGCCACGGCCTGTGGCCATCACATGGAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: RAVEPCVPAAVSGCS*TRAQPRPVAITWKR Trigger: CCGTTTCCATGTGATGGCCACAGGCCGTGGCTGTGCCCTGGTCCAGCTGCAGCCACTGACAGCTGCAGGTACACATGGCTCTACAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
||
| CDS GCA 90 bp | GCTTGGTGGTCTCGGCTGGCCACAGAAAGCGCTGGCCCAGAACGGTaGCCACACGAGCAGCATAAGTGTGGTCCCCAAGAATTGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: AWWSRLATESAGPER*PHEQHKCGPQELDR Trigger: TCTGTCCAATTCTTGGGGACCACACTTATGCTGCTCGTGTGGGCACCGTTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
||
| CDS CCA 90 bp | GGCTGCAGCTGGACCAGGGCACAGCCACGGCCTGTGGCCATCACATaGAAACGGCTGAGGGTCCTTTTGACACCTTCCTGGATGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GCSWTRAQPRPVAIT*KRLRVLLTPSWMSF Trigger: AAAGGACATCCAGGAAGGTGTCAAAAGGACCCTCAGCCGTTTCCATGTGATGGCCACAGGCCGTGGCTGTGCCCTGGTCCAGCTGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
||
| CDS TCA 90 bp | GAGGCATGCAGACTGTCCCCTCTGAAGGCTCAGGGATGCCATCAGTaGCAGCACAGTAGGTGGCTGTGGGTCTCTGTGCTCTCCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EACRLSPLKAQGCHQ*QHSRWLWVSVLSLS Trigger: ACTCAAGGAGAGCACAGAGACCCACAGCCACCTACTGTGCTGTCACTGATGGCATCCCTGAGCCTTCAGAGGGGACAGTCTGCATGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
||
| CDS GCA 90 bp | GTGGCTGTGGGTCTCTGTGCTCTCCTTGAGTGGATAAAGAACTTCTaGAGGCGGCTTGCTGTCTGGGGACAGCTGGAGAGGAGCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VAVGLCALLEWIKNF*RRLAVWGQLERSTS Trigger: ACTTGTGCTCCTCTCCAGCTGTCCCCAGACAGCAAGCCGCCTGCAGAAGTTCTTTATCCACTCAAGGAGAGCACAGAGACCCACAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000129560.2 ENSMUST00000147726.8 ENSMUST00000151618.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGTGCAGGTGCAAAGGCATCTGGGCCACTTGGGAAGGACTTAGGCGGAGGTTGTGGTCCCCAAGAATaGGACAGAGCTGTAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGAGAKASGPLGKDLGGGCGPQE*DRAVEP Trigger: TGGCTCTACAGCTCTGTCCAATTCTTGGGGACCACA...ACCTCCGCCTAAGTCCTTCCCAAGTGGCCCAGATGCCTTTGCACCTGCACCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
||
| CDS-3UTR CAA 90 bp | AACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGGGCAGACCCTGTGGCTaGTTCAGTGTCACCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NVRTCNVSFHHLQLMDKRGRPCG*FSVTRG Trigger: ACCTCTGGTGACACTGAACAAGCCACAGGGTCTGCC...CCTCTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
||
| CDS TCA 90 bp | ATCAGTGACAGCACAGTAGGTGGCTGTGGGTCTCTGTGCTCTCCTTaGGTGGATAAAGAACTTCTGCAGGCGGCTTGCTGTCTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ISDSTVGGCGSLCSP*VDKELLQAACCLGT Trigger: TGTCCCCAGACAGCAAGCCGCCTGCAGAAGTTCTTTATCCACTCAAGGAGAGCACAGAGACCCACAGCCACCTACTGTGCTGTCACTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS CCA 90 bp | GTGGCCATCACATGGAAACGGCTGAGGGTCCTTTTGACACCTTCCTaGATGTCCTTTCGAGATGGGGACATCACTGGGACTGCAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: VAITWKRLRVLLTPS*MSFRDGDITGTARS Trigger: TGATCTTGCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAGGACCCTCAGCCGTTTCCATGTGATGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
||
| CDS-3UTR CAA 90 bp | AGCAATCACGTGGCCTCTCTGGGATTTGATCTTAGTTTGTCAGACCAAGGAGCCGGCAGACCCTGTGGCTaGTTCAGTGTCACCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNHVASLGFDLSLSDQGAGRPCG*FSVTRG Trigger: ACCTCTGGTGACACTGAACAAGCCACAGGGTCTGCC...GGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTGATTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCCTTGGCTGTGCTCAGCACCAACTCCACTCGCCTTATTCTTCCTATTTTCTGTGGTCCCCAAGAATaGGACAGAGCTGTAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GALAVLSTNSTRLILPIFCGPQE*DRAVEP Trigger: TGGCTCTACAGCTCTGTCCAATTCTTGGGGACCACA...GAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGCTGAGCACAGCCAAGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS-3UTR CAA 90 bp | AACGTGAGGACCTGTAATGTCAGCTTCCACCACCTCCAGCTCATGGACAAGAGGTGTGGTCCCCAAGAATaGGACAGAGCTGTAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVRTCNVSFHHLQLMDKRCGPQE*DRAVEP Trigger: TGGCTCTACAGCTCTGTCCAATTCTTGGGGACCACA...CCTCTTGTCCATGAGCTGGAGGTGGTGGAAGCTGACATTACAGGTCCTCACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS TCA 90 bp | GTCATTCATTTGTTCCATCTTCAGAGGCATGCAGACTGTCCCCTCTaGAGGCTCAGGGATGCCATCAGTGACAGCACAGTAGGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VIHLFHLQRHADCPL*RLRDAISDSTVGGC Trigger: ACAGCCACCTACTGTGCTGTCACTGATGGCATCCCTGAGCCTTCAGAGGGGACAGTCTGCATGCCTCTGAAGATGGAACAAATGAATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAGAACTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGGCAGACCCTGTGGCTaGTTCAGTGTCACCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGRTFIKSREKSPAQCHTGRPCG*FSVTRG Trigger: ACCTCTGGTGACACTGAACAAGCCACAGGGTCTGCC...TGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAGTTCTACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
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| CDS CCA 90 bp | ACGGCTGAGGGTCCTTTTGACACCTTCCTGGATGTCCTTTCGAGATaGGGACATCACTGGGACTGCAAGATCAACGTCATTCATTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TAEGPFDTFLDVLSR*GHHWDCKINVIHLF Trigger: GAACAAATGAATGACGTTGATCTTGCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAGGACCCTCAGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS GCA 90 bp | GACACCTTCCTGGATGTCCTTTCGAGATGGGGACATCACTGGGACTaGAAGATCAACGTCATTCATTTGTTCCATCTTCAGAGGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTFLDVLSRWGHHWD*KINVIHLFHLQRHA Trigger: TGCATGCCTCTGAAGATGGAACAAATGAATGACGTTGATCTTGCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
||
| CDS-3UTR CAA 90 bp | CACGTGGCCTCTCTGGGATTTGATCTTAGTTTGTCAGACCAAGGAGCCCAGGGGATCAACGTCATTCATTaGTTCCATCTTCAGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HVASLGFDLSLSDQGAQGINVIH*FHLQRH Trigger: ATGCCTCTGAAGATGGAACAAATGAATGACGTTGAT...CCCCTGGGCTCCTTGGTCTGACAAACTAAGATCAAATCCCAGAGAGGCCACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS CCA 90 bp | CCTTTTGACACCTTCCTGGATGTCCTTTCGAGATGGGGACATCACTaGGACTGCAAGATCAACGTCATTCATTTGTTCCATCTTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFDTFLDVLSRWGHH*DCKINVIHLFHLQR Trigger: CCTCTGAAGATGGAACAAATGAATGACGTTGATCTTGCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS-3UTR CAA 90 bp | CTTTTATTAAGTCCAGAGAGAAGTCACCTGCCCAGTGCCACACAGCAATCACGTATCAACGTCATTCATTaGTTCCATCTTCAGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLSPERSHLPSATQQSRINVIH*FHLQRH Trigger: ATGCCTCTGAAGATGGAACAAATGAATGACGTTGAT...ACGTGATTGCTGTGTGGCACTGGGCAGGTGACTTCTCTCTGGACTTAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 |
||
| CDS GCA 72 bp | CCGGGCCTCGGTGCCGAAGCCGGCATCCCTCTGCCGTaGGCAAGACCCCAGCTCCGGCCGCCAGATCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLGAEAGIPLP*ARPQLRPPDHR Trigger: TCTATGATCTGGCGGCCGGAGCTGGGGTCTTGCGCACGGCAGAGGGATGCCGGCTTCGGCACCGAGGCCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000129560.2 ENSMUST00000151618.8 |
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| CDS GCA 72 bp | GCGGGCCTCGGTGCCGAAGCCGGCATCCCTCTGCCGTaGGCAAGACCCCAGCTCCGGCCGCCAGATCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGLGAEAGIPLP*ARPQLRPPDHR Trigger: TCTATGATCTGGCGGCCGGAGCTGGGGTCTTGCGCACGGCAGAGGGATGCCGGCTTCGGCACCGAGGCCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
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| CDS CAA 90 bp | CTCAGCAGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTTGTGCTaGCGGGCCTCGGTGCCGAAGCCGGCATCCCTCTGCCGTGCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSSPGKGWSSTRSLC*RASVPKPASLCRAQ Trigger: TTGCGCACGGCAGAGGGATGCCGGCTTCGGCACCGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
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| CDS CAA 90 bp | TCCGTCCTCAGCAGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTaGTGCTTGCGGGCCTCGGTGCCGAAGCCGGCATCCCTCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SVLSSPGKGWSSTRS*CLRASVPKPASLCR Trigger: ACGGCAGAGGGATGCCGGCTTCGGCACCGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGAGGACGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
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| CDS GCA 72 bp | AGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTTGTaGTTGCGGGCCTCGGTGCCGAAGCCGGCATCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPGKGWSSTRSL*LRASVPKPASL Trigger: GAGGGATGCCGGCTTCGGCACCGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
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| CDS CAA 72 bp | AGCAGCCCCGGGAAGGGCTGGTCCTCGACTAGGTCCTaGTGCTTGCGGGCCTCGGTGCCGAAGCCGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPGKGWSSTRS*CLRASVPKPAS Trigger: GGATGCCGGCTTCGGCACCGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
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| CDS CCA 72 bp | AGTCCGGAGGCCTCCTTCCCAGGTGCTCGCACAACCTaGAGCTCCTGGTGTTCGAGCCCCAGGGCCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SPEASFPGARTT*SSWCSSPRAWL Trigger: GAGCCAGGCCCTGGGGCTCGAACACCAGGAGCTCCAGGTTGTGCGAGCACCTGGGAAGGAGGCCTCCGGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS CCA 72 bp | CCGAGGTTCTCCGTCCTCAGCAGCCCCGGGAAGGGCTaGTCCTCGACTAGGTCCTTGTGCTTGCGGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PRFSVLSSPGKG*SSTRSLCLRAS Trigger: CGAGGCCCGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGAGGACGGAGAACCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147726.8 |
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| CDS CCA 72 bp | GGAAGGGCTGGTCCTCGACTAGGTCCTTGTGCTTGCTaGAGCGGTGAGGTTGAGACGGACGCCGGGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GRAGPRLGPCAC*SGEVETDAGPR Trigger: CCGAGGCCCGGCGTCCGTCTCAACCTCACCGCTCCAGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000129560.2 ENSMUST00000151618.8 |
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| CDS CCA 72 bp | CCGAGGTTCTCCGTCCTCAGCAGCCCCGGGAAGGGCTaGTCCTCGACTAGGTCCTTGTGCTTGCTGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRFSVLSSPGKG*SSTRSLCLLER Trigger: CCGCTCCAGCAAGCACAAGGACCTAGTCGAGGACCAGCCCTTCCCGGGGCTGCTGAGGACGGAGAACCTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000129560.2 ENSMUST00000151618.8 |
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| CDS GCA 72 bp | CAAGTCCGGAGGCCTCCCTTTCTGATCCACCACAGCTaGCCTCAGGACATGAGCCAGCTCCTCCAGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: QVRRPPFLIHHS*PQDMSQLLQAE Trigger: CTCGGCCTGGAGGAGCTGGCTCATGTCCTGAGGGCAGCTGTGGTGGATCAGAAAGGGAGGCCTCCGGACTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129560.2 |
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| CDS CCA 72 bp | GAGCCATGTGTACCTGCAGCTGTCAGTGGCTGCAGCTaGACCAGGGCACAGCCACGGCCTGTGGCCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: EPCVPAAVSGCS*TRAQPRPVAIT Trigger: TGTGATGGCCACAGGCCGTGGCTGTGCCCTGGTCCAGCTGCAGCCACTGACAGCTGCAGGTACACATGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| CDS CAA 90 bp | CAGAGAGCAGGCATATGGGACAGGGGACCTACCTGTCTCTGGGGCTaGGTGGTCTCGGCTGGCCACAGAAAGCGCTGGCCCAGAACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QRAGIWDRGPTCLWG*VVSAGHRKRWPRTV Trigger: CACCGTTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGACAGGTAGGTCCCCTGTCCCATATGCCTGCTCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS GCA 72 bp | CAGCTCTCCTGGTCTCCCTTTCTGATCCACCACAGCTaGCCTCAGGACATGAGCCAGCTCCTCCAGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLSWSPFLIHHS*PQDMSQLLQAE Trigger: CTCGGCCTGGAGGAGCTGGCTCATGTCCTGAGGGCAGCTGTGGTGGATCAGAAAGGGAGACCAGGAGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151618.8 |
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| CDS CCA 72 bp | TATGGGACAGGGGACCTACCTGTCTCTGGGGCTTGGTaGTCTCGGCTGGCCACAGAAAGCGCTGGCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: YGTGDLPVSGAW*SRLATESAGPE Trigger: TTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGACCACCAAGCCCCAGAGACAGGTAGGTCCCCTGTCCCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129047.8 |
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| CDS GCA 72 bp | TCTCGGCTGGCCACAGAAAGCGCTGGCCCAGAACGGTaGCCACACGAGCAGCATAAGTGTGGTCCCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRLATESAGPER*PHEQHKCGPQE Trigger: TTCTTGGGGACCACACTTATGCTGCTCGTGTGGGCACCGTTCTGGGCCAGCGCTTTCTGTGGCCAGCCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS CCA 72 bp | TGGACCAGGGCACAGCCACGGCCTGTGGCCATCACATaGAAACGGCTGAGGGTCCTTTTGACACCTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WTRAQPRPVAIT*KRLRVLLTPSW Trigger: CCAGGAAGGTGTCAAAAGGACCCTCAGCCGTTTCCATGTGATGGCCACAGGCCGTGGCTGTGCCCTGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS CAA 90 bp | CAGCCACGGCCTGTGGCCATCACATGGAAACGGCTGAGGGTCCTTTaGACACCTTCCTGGATGTCCTTTCGAGATGGGGACATCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QPRPVAITWKRLRVL*TPSWMSFRDGDITG Trigger: CCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAGGACCCTCAGCCGTTTCCATGTGATGGCCACAGGCCGTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS TCA 72 bp | AGACTGTCCCCTCTGAAGGCTCAGGGATGCCATCAGTaGCAGCACAGTAGGTGGCTGTGGGTCTCTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLSPLKAQGCHQ*QHSRWLWVSVL Trigger: GAGCACAGAGACCCACAGCCACCTACTGTGCTGTCACTGATGGCATCCCTGAGCCTTCAGAGGGGACAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS GCA 72 bp | GGTCTCTGTGCTCTCCTTGAGTGGATAAAGAACTTCTaGAGGCGGCTTGCTGTCTGGGGACAGCTGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLCALLEWIKNF*RRLAVWGQLER Trigger: CCTCTCCAGCTGTCCCCAGACAGCAAGCCGCCTGCAGAAGTTCTTTATCCACTCAAGGAGAGCACAGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000129560.2 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS GCA 72 bp | CCAAGAATTGGACAGAGCTGTAGAGCCATGTGTACCTaGAGCTGTCAGTGGCTGCAGCTGGACCAGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PRIGQSCRAMCT*SCQWLQLDQGT Trigger: TGTGCCCTGGTCCAGCTGCAGCCACTGACAGCTGCAGGTACACATGGCTCTACAGCTCTGTCCAATTCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060634.14 |
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| CDS CCA 72 bp | CAGCTCTCCTGGTCTCCCTGTCACAGGCAGACCCTGTaGCTTGTTCAGTGTCACCAGAGGTCCTTTCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: QLSWSPCHRQTL*LVQCHQRSFLI Trigger: GATCAGAAAGGACCTCTGGTGACACTGAACAAGCCACAGGGTCTGCCTGTGACAGGGAGACCAGGAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS CAA 90 bp | CCAGAACGGTGCCCACACGAGCAGCATAAGTGTGGTCCCCAAGAATaGGACAGAGCTGTAGAGCCATGTGTACCTGCAGCTGATTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PERCPHEQHKCGPQE*DRAVEPCVPAADWG Trigger: TCCCCAATCAGCTGCAGGTACACATGGCTCTACAGCTCTGTCCAATTCTTGGGGACCACACTTATGCTGCTCGTGTGGGCACCGTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS CAA 72 bp | CCTGTGGCCATCACATGGAAACGGCTGAGGGTCCTTTaGACACCTTCCTGGATGTCCTTTCGAGATGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PVAITWKRLRVL*TPSWMSFRDGD Trigger: GTCCCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAGGACCCTCAGCCGTTTCCATGTGATGGCCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
||
| CDS TCA 72 bp | AGCACAGTAGGTGGCTGTGGGTCTCTGTGCTCTCCTTaGGTGGATAAAGAACTTCTGCAGGCGGCTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: STVGGCGSLCSP*VDKELLQAACC Trigger: ACAGCAAGCCGCCTGCAGAAGTTCTTTATCCACTCAAGGAGAGCACAGAGACCCACAGCCACCTACTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS CAA 72 bp | TGCCCACACGAGCAGCATAAGTGTGGTCCCCAAGAATaGGACAGAGCTGTAGAGCCATGTGTACCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPHEQHKCGPQE*DRAVEPCVPAA Trigger: AGCTGCAGGTACACATGGCTCTACAGCTCTGTCCAATTCTTGGGGACCACACTTATGCTGCTCGTGTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS TCA 72 bp | TTGTTCCATCTTCAGAGGCATGCAGACTGTCCCCTCTaGAGGCTCAGGGATGCCATCAGTGACAGCACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LFHLQRHADCPL*RLRDAISDSTV Trigger: TACTGTGCTGTCACTGATGGCATCCCTGAGCCTTCAGAGGGGACAGTCTGCATGCCTCTGAAGATGGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS CCA 72 bp | ACATGGAAACGGCTGAGGGTCCTTTTGACACCTTCCTaGATGTCCTTTCGAGATGGGGACATCACTGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: TWKRLRVLLTPS*MSFRDGDITGT Trigger: AGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAGGACCCTCAGCCGTTTCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS GCA 72 bp | GATCAACGTCATTCATTTGTTCCATCTTCAGAGGCATaGAGACTGTCCCCTCTGAAGGCTCAGGGATGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DQRHSFVPSSEA*RLSPLKAQGCH Trigger: ATGGCATCCCTGAGCCTTCAGAGGGGACAGTCTGCATGCCTCTGAAGATGGAACAAATGAATGACGTTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS CCA 72 bp | GGTCCTTTTGACACCTTCCTGGATGTCCTTTCGAGATaGGGACATCACTGGGACTGCAAGATCAACGTCATT | + |
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Preference number: 6 (lower is better) Translates to: GPFDTFLDVLSR*GHHWDCKINVI Trigger: AATGACGTTGATCTTGCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGTGTCAAAAGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS CAA 72 bp | GGACATCACTGGGACTGCAAGATCAACGTCATTCATTaGTTCCATCTTCAGAGGCATGCAGACTGTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GHHWDCKINVIH*FHLQRHADCPL Trigger: GAGGGGACAGTCTGCATGCCTCTGAAGATGGAACAAATGAATGACGTTGATCTTGCAGTCCCAGTGATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 ENSMUST00000151618.8 |
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| CDS GCA 72 bp | CTGGATGTCCTTTCGAGATGGGGACATCACTGGGACTaGAAGATCAACGTCATTCATTTGTTCCATCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LDVLSRWGHHWD*KINVIHLFHLQ Trigger: CTGAAGATGGAACAAATGAATGACGTTGATCTTGCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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| CDS CCA 72 bp | ACCTTCCTGGATGTCCTTTCGAGATGGGGACATCACTaGGACTGCAAGATCAACGTCATTCATTTGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TFLDVLSRWGHH*DCKINVIHLFH Trigger: ATGGAACAAATGAATGACGTTGATCTTGCAGTCCCAGTGATGTCCCCATCTCGAAAGGACATCCAGGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060634.14 ENSMUST00000113092.9 ENSMUST00000129047.8 ENSMUST00000147726.8 |
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