Pregenerated sensors for RPUSD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027324Ensembl transcript IDs: ENSMUST00000028796.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACTGTGAAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATaGGAGCAGTCCCTGTCTCAAGGCCCATCCTTGCTCCAATCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LTVKPCSSPNLSINQ*EQSLSQGPSLLQSK Trigger: CTTGGATTGGAGCAAGGATGGGCCTTGAGACAGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR CAA 90 bp | AAGGAGGTAGCAGCAGGTACAAGCAAGGTTCCTTACTGTGAAACCTaGCTCTTCTCCAAACCTGAGTATCAACCAATGGGAGCAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KEVAAGTSKVPYCET*LFSKPEYQPMGAVP Trigger: AGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACAGTAAGGAACCTTGCTTGTACCTGCTGCTACCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTCCTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTCTGAGTATCAACCAATaGGAGCAGTCCCTGTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: TLLESQHSEGRCRWIFVSLSINQ*EQSLSQ Trigger: TTGAGACAGGGACTGCTCCCATTGGTTGATACTCAG...ACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGAATCTATGTACAGATCTaGAAGCCCCAACAAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RVQDLPELEKLRNTKGLGIYVQI*KPQQAR Trigger: TCTGGCTTGTTGGGGCTTTCAGATCTGTACATAGAT...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTCCTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTAAAAAGGGAAGAATGTaGTGTACAGTTTCCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: TLLESQHSEGRCRWIFVSKKGRM*CTVSCR Trigger: CCTACAGGAAACTGTACAGCACATTCTTCCCTTTTT...ACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGACTTACTGTGAAACCTTaGTCTTCTCCAAACCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RVQDLPELEKLRNTKGLGLTVKP*SSPNLS Trigger: ACTCAGGTTTGGAGAAGAGCAAGGTTTCACAGTAAG...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR GCA 72 bp | GGCACACTCCTTGAATCCCAGCACTCAGAAGGCAGATaGAGGTGGATCTTTGTGAGTTCAAGACCAGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GTLLESQHSEGR*RWIFVSSRPAW Trigger: CCAAGCTGGTCTTGAACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR TCA 72 bp | CCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTaGGTTCAAGACCAGCTTGGTCTACAGAGCAAGATC | + |
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Preference number: 3 (lower is better) Translates to: PSTQKADAGGSL*VQDQLGLQSKI Trigger: GATCTTGCTCTGTAGACCAAGCTGGTCTTGAACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR GCA 72 bp | ACCAATGGGAGCAGTCCCTGTCTCAAGGCCCATCCTTaGTCCAATCCAAGAAGCCATTTTTCCAATGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: TNGSSPCLKAHP*SNPRSHFSNGH Trigger: GTGACCATTGGAAAAATGGCTTCTTGGATTGGAGCAAGGATGGGCCTTGAGACAGGGACTGCTCCCATTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR CCA 72 bp | AAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATaGGAGCAGTCCCTGTCTCAAGGCCCATCCTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: KPCSSPNLSINQ*EQSLSQGPSLL Trigger: GAGCAAGGATGGGCCTTGAGACAGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGATCTCAAGGCCCATCCTaGCTCCAATCCAAGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RVQDLPELEKLRNTKGLGSQGPS*LQSKKP Trigger: TGGCTTCTTGGATTGGAGCAAGGATGGGCCTTGAGA...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGACCTTACTGTGAAACCTaGCTCTTCTCCAAACCTGAG | + |
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Preference number: 3 (lower is better) Translates to: RVQDLPELEKLRNTKGLGPYCET*LFSKPE Trigger: CTCAGGTTTGGAGAAGAGCAAGGTTTCACAGTAAGG...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR GCA 72 bp | CAGCAGGTACAAGCAAGGTTCCTTACTGTGAAACCTTaGTCTTCTCCAAACCTGAGTATCAACCAATGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QQVQARFLTVKP*SSPNLSINQWE Trigger: CTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACAGTAAGGAACCTTGCTTGTACCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | CTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTTCAAGATCGCCTCCCTGGGCCTaGTCCCCGCTCTCCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: LESQHSEGRCRWIFVSSRSPPWA*SPLSGT Trigger: GGTCCCGGAGAGCGGGGACCAGGCCCAGGGAGGCGA...TCTTGAACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | TGTGAAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATGGGAGCAGTCCCTCCGTTGCTCGGGAGCTaGCCTTCGCCTCCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CETLLFSKPEYQPMGAVPPLLGS*PSPPWA Trigger: GGCCCAGGGAGGCGAAGGGCAGCTCCCGAGCAACGG...AGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | CCTGTATTCCCGCTCTGGAGGCAATGTAGGAGGATTCAGGGTTCAAGATCTGCCAATAGGGCCGCACCTTaGGCAGGCCGCCCTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PVFPLWRQCRRIQGSRSANRAAP*AGRPRS Trigger: ACTTCGAGGGCGGCCTGCGCAAGGTGCGGCCCTATT...GGCAGATCTTGAACCCTGAATCCTCCTACATTGCCTCCAGAGCGGGAATACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | CCTGTATTCCCGCTCTGGAGGCAATGTAGGAGGATTCAGGGTTCAAGATCTGCCGGTTCCTCGTTGAGATaGAGGCGTCCTGCCCGGACA | + |
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Preference number: 4 (lower is better) Translates to: PVFPLWRQCRRIQGSRSAGSSLR*RRPART Trigger: TGTCCGGGCAGGACGCCTGCATCTCAACGAGGAACC...GGCAGATCTTGAACCCTGAATCCTCCTACATTGCCTCCAGAGCGGGAATACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGACCCGCTGCCTCGGCTTaGGCAGACAGTGCCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RVQDLPELEKLRNTKGLGPAASA*ADSASV Trigger: GACTGAGGCACTGTCTGCGCAAGCCGAGGCAGCGGG...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | CTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTTCAAGAAGACGTGCAACAAGCTaGGGCCCACCCAGCGACCTT | + |
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Preference number: 4 (lower is better) Translates to: LESQHSEGRCRWIFVSSRRRATS*GPPSDL Trigger: AAGGTCGCTGGGTGGGCCGCAGCTTGTTGCACGTCT...TCTTGAACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | CCTGTATTCCCGCTCTGGAGGCAATGTAGGAGGATTCAGGGTTCAAGATCTGCCTTTGGCCTGATGTTCTaGAACCAGGTCTCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PVFPLWRQCRRIQGSRSAFGLMF*NQVSEQ Trigger: CTGCTCCGAGACCTGGTTGCAGAACATCAGGCCAAA...GGCAGATCTTGAACCCTGAATCCTCCTACATTGCCTCCAGAGCGGGAATACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGAGGAATGTGGCCACCCTaGCCTCGAGAAGGACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RVQDLPELEKLRNTKGLGGMWPP*PREGPQ Trigger: CTGGGGTCCTTCTCGAGGCCAGGGTGGCCACATTCC...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | CCTGTATTCCCGCTCTGGAGGCAATGTAGGAGGATTCAGGGTTCAAGATCTGCCAACATTACGAGATCCTaGGGCAAGGGATCCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: PVFPLWRQCRRIQGSRSANITRS*GKGSCR Trigger: GCGACAGGATCCCTTGCCCCAGGATCTCGTAATGTT...GGCAGATCTTGAACCCTGAATCCTCCTACATTGCCTCCAGAGCGGGAATACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | TCAAGGCCCATCCTTGCTCCAATCCAAGAAGCCATTTTTCCAATGGTCACATTCGGGTGGCCCAGGAATTaGAGGTGGACTCGGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRPILAPIQEAIFPMVTFGWPRN*RWTRIW Trigger: CCAGATCCGAGTCCACCTCCAATTCCTGGGCCACCC...GAATGTGACCATTGGAAAAATGGCTTCTTGGATTGGAGCAAGGATGGGCCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | ACACTCCTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTTTCCTCGTCTGTCTTTaGAATGTGGCCACCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TLLESQHSEGRCRWIFVSFLVCL*NVATLA Trigger: GGCCAGGGTGGCCACATTCCAAAGACAGACGAGGAA...ACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATGGGAGCAGTCCCTGCATCTCCATTTGGCTaGACCAAAGCCTTCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: CETLLFSKPEYQPMGAVPASPFG*TKAFSP Trigger: CGGGCTGAAGGCTTTGGTTCAGCCAAATGGAGATGC...AGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATGGGAGCAGTCCCTATCGGAACTCGGTGCTaGAGACGTGCAACAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CETLLFSKPEYQPMGAVPIGTRC*RRATSC Trigger: GCAGCTTGTTGCACGTCTTCAGCACCGAGTTCCGAT...AGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | CTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTTCAAGATCCGCTTTTTCCTCTTaGCTGAGTCGGCGACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LESQHSEGRCRWIFVSSRSAFSS*LSRRLE Trigger: CTCCAGTCGCCGACTCAGGCAAGAGGAAAAAGCGGA...TCTTGAACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGAAGGCGGTCCAGCCGATaGAGTGGGTGTAGCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: RVQDLPELEKLRNTKGLGRRSSR*SGCSSF Trigger: GAAAGAGCTACACCCACTGCATCGGCTGGACCGCCT...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | ACACTCCTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTTCCCGAACCTGCTCATaGATCTTCTCCGAGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: TLLESQHSEGRCRWIFVSSRTCS*IFSETA Trigger: TGCAGTCTCGGAGAAGATCCATGAGCAGGTTCGGGA...ACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGACAGGTGGATAGGCTCTaGTGTGACTGGTGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: RVQDLPELEKLRNTKGLGQVDRL*CDWWLM Trigger: CATGAGCCACCAGTCACAGCAGAGCCTATCCACCTG...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | TCAAGGCCCATCCTTGCTCCAATCCAAGAAGCCATTTTTCCAATGGTCACATTCGTCAGGGAACTCCCCTaGAACCCGGCATACATACTC | + |
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Preference number: 4 (lower is better) Translates to: SRPILAPIQEAIFPMVTFVRELP*NPAYIL Trigger: GAGTATGTATGCCGGGTTGCAGGGGAGTTCCCTGAC...GAATGTGACCATTGGAAAAATGGCTTCTTGGATTGGAGCAAGGATGGGCCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATGGGAGCAGTCCCTACGATGCTGAGGTCCTaGACTGGTTCCTCGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: CETLLFSKPEYQPMGAVPTMLRS*TGSSLR Trigger: TCTCAACGAGGAACCAGTCCAGGACCTCAGCATCGT...AGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGAGGCACTGTACCACACTaGAGCGGCCATTGTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RVQDLPELEKLRNTKGLGGTVPH*SGHCSS Trigger: TGAGCTACAATGGCCGCTCCAGTGTGGTACAGTGCC...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | ACACTCCTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTTTTAGCTGCCTTCTCTaGTGTGTCCAGATGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TLLESQHSEGRCRWIFVSFSCLL*CVQMLR Trigger: CCTCAGCATCTGGACACACCAGAGAAGGCAGCTAAA...ACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR CAA 72 bp | AACCAATGGGAGCAGTCCCTGTCTCAAGGCCCATCCTaGCTCCAATCCAAGAAGCCATTTTTCCAATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NQWEQSLSQGPS*LQSKKPFFQWS Trigger: TGACCATTGGAAAAATGGCTTCTTGGATTGGAGCAAGGATGGGCCTTGAGACAGGGACTGCTCCCATTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR TCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGAGTCTTTAGCCAACTCTaGAGAGGGAGCTGTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: RVQDLPELEKLRNTKGLGVFSQL*RGSCRV Trigger: GACTCGACAGCTCCCTCTTCAGAGTTGGCTAAAGAC...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | ACACTCCTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTATTCCATCTATCTTCTaGGCTGCTGTAGCCAACCCT | + |
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Preference number: 4 (lower is better) Translates to: TLLESQHSEGRCRWIFVSIPSIF*AAVANP Trigger: AGGGTTGGCTACAGCAGCCCAGAAGATAGATGGAAT...ACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | TCAAGGCCCATCCTTGCTCCAATCCAAGAAGCCATTTTTCCAATGGTCACATTCGACGTACTCAAAGTCTaGCCCTTTATAGCGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SRPILAPIQEAIFPMVTFDVLKV*PFIAEG Trigger: GCCCTCCGCTATAAAGGGCCAGACTTTGAGTACGTC...GAATGTGACCATTGGAAAAATGGCTTCTTGGATTGGAGCAAGGATGGGCCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | TGTGAAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATGGGAGCAGTCCCTAGCTCTTTCAGTTGGTaGTCCTTGCCTAGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: CETLLFSKPEYQPMGAVPSSFSW*SLPRMK Trigger: CTTCATCCTAGGCAAGGAGCACCAACTGAAAGAGCT...AGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGACACATCTGCTTTAGCTaGCTTCTCTGGTGTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RVQDLPELEKLRNTKGLGHICFS*LLWCVQ Trigger: CTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTG...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | TCAAGGCCCATCCTTGCTCCAATCCAAGAAGCCATTTTTCCAATGGTCACATTCTTCTCAGCTAGCAGGTaGATAGGCTCTGCTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: SRPILAPIQEAIFPMVTFFSASR*IGSAVT Trigger: AGTCACAGCAGAGCCTATCCACCTGCTAGCTGAGAA...GAATGTGACCATTGGAAAAATGGCTTCTTGGATTGGAGCAAGGATGGGCCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | CAAGCCAGAAGGAAGGAGGTAGCAGCAGGTACAAGCAAGGTTCCTTACTGTGAATACTCAGGCTTTCTTTaGCCTGATGTTCTGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: QARRKEVAAGTSKVPYCEYSGFL*PDVLQP Trigger: TGGTTGCAGAACATCAGGCCAAAGAAAGCCTGAGTA...TTCACAGTAAGGAACCTTGCTTGTACCTGCTGCTACCTCCTTCCTTCTGGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CCA 90 bp | CCTGTATTCCCGCTCTGGAGGCAATGTAGGAGGATTCAGGGTTCAAGATCTGCCAAGACACCACTAAGATaGGTTCCTTACAAATTACCT | + |
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Preference number: 4 (lower is better) Translates to: PVFPLWRQCRRIQGSRSAKTPLR*VPYKLP Trigger: AGGTAATTTGTAAGGAACCCATCTTAGTGGTGTCTT...GGCAGATCTTGAACCCTGAATCCTCCTACATTGCCTCCAGAGCGGGAATACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| 3UTR CAA 72 bp | GCAGCAGGTACAAGCAAGGTTCCTTACTGTGAAACCTaGCTCTTCTCCAAACCTGAGTATCAACCAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: AAGTSKVPYCET*LFSKPEYQPMG Trigger: TCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACAGTAAGGAACCTTGCTTGTACCTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | GCTGGGGTCTGCTCTCCGTTGCTCGGGAGCTGCCCTTCGCCTCCCTaGGCCTGGTCCCCGCTCTCCGGGACCTGCTTCCCTACCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: AGVCSPLLGSCPSPP*AWSPLSGTCFPTAA Trigger: GGCGGCGGTAGGGAAGCAGGTCCCGGAGAGCGGGGACCAGGCCCAGGGAGGCGAAGGGCAGCTCCCGAGCAACGGAGAGCAGACCCCAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | GAGTCGGCGACTGGAGCTGGGGTCTGCTCTCCGTTGCTCGGGAGCTaGCCTTCGCCTCCCTGGGCCTGGTCCCCGCTCTCCGGGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: ESATGAGVCSPLLGS*PSPPWAWSPLSGTC Trigger: GCAGGTCCCGGAGAGCGGGGACCAGGCCCAGGGAGGCGAAGGGCAGCTCCCGAGCAACGGAGAGCAGACCCCAGCTCCAGTCGCCGACTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | CTCCAGGAGCGGCTCTCCGCTCGTGTTGCTACCAGCATCTCCATTTaGCTGAACCAAAGCCTTCAGCCCGCCCGCTGCCTCGGCTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: LQERLSARVATSISI*LNQSLQPARCLGLR Trigger: GCGCAAGCCGAGGCAGCGGGCGGGCTGAAGGCTTTGGTTCAGCCAAATGGAGATGCTGGTAGCAACACGAGCGGAGAGCCGCTCCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | GGGCCGCACCTTGCGCAGGCCGCCCTCGAAGTAGTAGGTAGTCTCTaGGAAGTGCTCATCGCTAAAGCTCACCCCGGTGCGCCGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPHLAQAALEVVGSL*EVLIAKAHPGAPFL Trigger: AAGAAACGGCGCACCGGGGTGAGCTTTAGCGATGAGCACTTCGCAGAGACTACCTACTACTTCGAGGGCGGCCTGCGCAAGGTGCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | ACCAGCATCTCCATTTGGCTGAACCAAAGCCTTCAGCCCGCCCGCTaGCTCGGCTTGCGCAGACAGTGCCTCAGTCATCGCCTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TSISIWLNQSLQPAR*LGLRRQCLSHRLPT Trigger: TGTGGGAAGGCGATGACTGAGGCACTGTCTGCGCAAGCCGAGGCAGCGGGCGGGCTGAAGGCTTTGGTTCAGCCAAATGGAGATGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 90 bp | CAGCGGCCTCGTAGTAAGACAGTGGCTGGGATCGGAACTCGGTGCTaGAGACGTGCAACAAGCTGCGGCCCACCCAGCGACCTTTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRPRSKTVAGIGTRC*RRATSCGPPSDLYS Trigger: ACTGTAAAGGTCGCTGGGTGGGCCGCAGCTTGTTGCACGTCTTCAGCACCGAGTTCCGATCCCAGCCACTGTCTTACTACGAGGCCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 90 bp | TTGAGAATCGGGTGGCCCAGGAATTGGAGGTGGACTCGGATCTGGTaGGTGCGACCTGTAAGTGGTCGGCACTGTACCACACTGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRIGWPRNWRWTRIW*VRPVSGRHCTTLER Trigger: CCGCTCCAGTGTGGTACAGTGCCGACCACTTACAGGTCGCACTCACCAGATCCGAGTCCACCTCCAATTCCTGGGCCACCCGATTCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 90 bp | CTGGGCTGCTGTAGCCAACCCTTCCAGGCTGTCTTTAGCCAACTCTaGAGAGGGAGCTGTCGAGTCTATGAGCCCTGGCGTCAGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LGCCSQPFQAVFSQL*RGSCRVYEPWRQVT Trigger: AGTGACCTGACGCCAGGGCTCATAGACTCGACAGCTCCCTCTTCAGAGTTGGCTAAAGACAGCCTGGAAGGGTTGGCTACAGCAGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | GTGAGGCGGTCCAGCCGATGCAGTGGGTGTAGCTCTTTCAGTTGGTaGTCCTTGCCTAGGATGAAGATGACCGTGTTGTGTCGGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VRRSSRCSGCSSFSW*SLPRMKMTVLCRKR Trigger: CCGCTTCCGACACAACACGGTCATCTTCATCCTAGGCAAGGAGCACCAACTGAAAGAGCTACACCCACTGCATCGGCTGGACCGCCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | CACTCGGCACTCGGCACAGAGCGGGTCTGTTTCTTGAGTCACATCTaGTTTAGCTGCCTTCTCTGGTGTGTCCAGATGCTGAGGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSALGTERVCFLSHI*FSCLLWCVQMLRGC Trigger: GCAGCCCCTCAGCATCTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTGACTCAAGAAACAGACCCGCTCTGTGCCGAGTGCCGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | CAGGAATTGGAGGTGGACTCGGATCTGGTGAGTGCGACCTGTAAGTaGTCGGCACTGTACCACACTGGAGCGGCCATTGTAGCTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QELEVDSDLVSATCK*SALYHTGAAIVAQP Trigger: AGGCTGAGCTACAATGGCCGCTCCAGTGTGGTACAGTGCCGACCACTTACAGGTCGCACTCACCAGATCCGAGTCCACCTCCAATTCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 90 bp | GGCCTCGAGAAGGACCCCAGGCAGTTGAATTGTAGATGGGGTCATTaGGAATCGGGTGGCCCAGGAATTGGAGGTGGACTCGGATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLEKDPRQLNCRWGH*ESGGPGIGGGLGSG Trigger: ACCAGATCCGAGTCCACCTCCAATTCCTGGGCCACCCGATTCTCAATGACCCCATCTACAATTCAACTGCCTGGGGTCCTTCTCGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | GTCTTCGCAAACATGAGCACTCCTGAGGTGAGGCGGTCCAGCCGATaGAGTGGGTGTAGCTCTTTCAGTTGGTGCTCCTTGCCTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VFANMSTPEVRRSSR*SGCSSFSWCSLPRM Trigger: CATCCTAGGCAAGGAGCACCAACTGAAAGAGCTACACCCACTGCATCGGCTGGACCGCCTCACCTCAGGAGTGCTCATGTTTGCGAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | GAGGTGAGGCGGTCCAGCCGATGCAGTGGGTGTAGCTCTTTCAGTTaGTGCTCCTTGCCTAGGATGAAGATGACCGTGTTGTGTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EVRRSSRCSGCSSFS*CSLPRMKMTVLCRK Trigger: CTTCCGACACAACACGGTCATCTTCATCCTAGGCAAGGAGCACCAACTGAAAGAGCTACACCCACTGCATCGGCTGGACCGCCTCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | CTCGGCACAGAGCGGGTCTGTTTCTTGAGTCACATCTGCTTTAGCTaGCTTCTCTGGTGTGTCCAGATGCTGAGGGGCTGCCTCAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGTERVCFLSHICFS*LLWCVQMLRGCLSY Trigger: ATAGCTGAGGCAGCCCCTCAGCATCTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTGACTCAAGAAACAGACCCGCTCTGTGCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | CCTAGGATGAAGATGACCGTGTTGTGTCGGAAGCGGCCACAGGGGTaGACAGGAATGGAGGACGGCTTGTCTATAACAACCACATCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRMKMTVLCRKRPQG*TGMEDGLSITTTSL Trigger: CAACGATGTGGTTGTTATAGACAAGCCGTCCTCCATTCCTGTGCACCCCTGTGGCCGCTTCCGACACAACACGGTCATCTTCATCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 90 bp | ATCTGCTTTAGCTGCCTTCTCTGGTGTGTCCAGATGCTGAGGGGCTaGCTCAGCTATTCCATCTATCTTCTGGGCTGCTGTAGCCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: ICFSCLLWCVQMLRG*LSYSIYLLGCCSQP Trigger: GGGTTGGCTACAGCAGCCCAGAAGATAGATGGAATAGCTGAGGCAGCCCCTCAGCATCTGGACACACCAGAGAAGGCAGCTAAAGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | CGGCATACATACTCCTTCTCCAGCTGCCGATCCCGAACCTGCTCATaGATCTTCTCCGAGACTGCAGCTGTCTTCGCAAACATGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RHTYSFSSCRSRTCS*IFSETAAVFANMST Trigger: AGTGCTCATGTTTGCGAAGACAGCTGCAGTCTCGGAGAAGATCCATGAGCAGGTTCGGGATCGGCAGCTGGAGAAGGAGTATGTATGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | GCGTCAGGTCACTCTCACAGAGATCTAGCATACTCAGGCTTTCTTTaGCCTGATGTTCTGCAACCAGGTCTCGGAGCAGTTCCTCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGHSHRDLAYSGFL*PDVLQPGLGAVPRL Trigger: CAGACGAGGAACTGCTCCGAGACCTGGTTGCAGAACATCAGGCCAAAGAAAGCCTGAGTATGCTAGATCTCTGTGAGAGTGACCTGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGAACAGTCTCACAAGGCTaGCCCCGGGGATCCACACGG | + |
|
Preference number: 5 (lower is better) Translates to: RVQDLPELEKLRNTKGLGTVSQG*PRGSTR Trigger: CCGTGTGGATCCCCGGGGCAAGCCTTGTGAGACTGT...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGACGGGTGGCCCAGGAATaGGAGGTGGACTCGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RVQDLPELEKLRNTKGLGRVAQE*EVDSDL Trigger: CAGATCCGAGTCCACCTCCAATTCCTGGGCCACCCG...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | GAGCGGGTCTGTTTCTTGAGTCACATCTGCTTTAGCTGCCTTCTCTaGTGTGTCCAGATGCTGAGGGGCTGCCTCAGCTATTCCATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ERVCFLSHICFSCLL*CVQMLRGCLSYSIY Trigger: ATAGATGGAATAGCTGAGGCAGCCCCTCAGCATCTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTGACTCAAGAAACAGACCCGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | CAAGCCAGAAGGAAGGAGGTAGCAGCAGGTACAAGCAAGGTTCCTTACTGTGAAATGAAGATGACCGTGTaGTGTCGGAAGCGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QARRKEVAAGTSKVPYCEMKMTV*CRKRPQ Trigger: CTGTGGCCGCTTCCGACACAACACGGTCATCTTCAT...TTCACAGTAAGGAACCTTGCTTGTACCTGCTGCTACCTCCTTCCTTCTGGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | CCTGTATTCCCGCTCTGGAGGCAATGTAGGAGGATTCAGGGTTCAAGATCTGCCTTCAGTTGGTGCTCCTaGCCTAGGATGAAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: PVFPLWRQCRRIQGSRSAFSWCS*PRMKMT Trigger: GGTCATCTTCATCCTAGGCAAGGAGCACCAACTGAA...GGCAGATCTTGAACCCTGAATCCTCCTACATTGCCTCCAGAGCGGGAATACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAACCTTGCTCTTCTCCAAACCTGAGTATCAACCAATGGGAGCAGTCCCTGTTCCTCGTCTGTCTTaGGAATGTGGCCACCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CETLLFSKPEYQPMGAVPVPRLS*ECGHPG Trigger: GCCAGGGTGGCCACATTCCAAAGACAGACGAGGAAC...AGGGACTGCTCCCATTGGTTGATACTCAGGTTTGGAGAAGAGCAAGGTTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 90 bp | GGGGATCCACACGGCACACTCCTACCTTGTAAGACACCACTAAGATaGGTTCCTTACAAATTACCTCCTTGTCAGGGAACTCCCCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GDPHGTLLPCKTPLR*VPYKLPPCQGTPLQ Trigger: TTGCAGGGGAGTTCCCTGACAAGGAGGTAATTTGTAAGGAACCCATCTTAGTGGTGTCTTACAAGGTAGGAGTGTGCCGTGTGGATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 90 bp | AGGTCACTCTCACAGAGATCTAGCATACTCAGGCTTTCTTTGGCCTaGTGTTCTGCAACCAGGTCTCGGAGCAGTTCCTCGTCTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSLSQRSSILRLSLA*CSATRSRSSSSSVF Trigger: AAAGACAGACGAGGAACTGCTCCGAGACCTGGTTGCAGAACATCAGGCCAAAGAAAGCCTGAGTATGCTAGATCTCTGTGAGAGTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | ACACTCCTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTGAGCGGGTCTGTTTCTaGAGTCACATCTGCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLLESQHSEGRCRWIFVSERVCF*SHICFS Trigger: GCTAAAGCAGATGTGACTCAAGAAACAGACCCGCTC...ACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAGGAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | CAAGCCAGAAGGAAGGAGGTAGCAGCAGGTACAAGCAAGGTTCCTTACTGTGAATTCCGCAAGAAATCATaGTCCTTGAGCACGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QARRKEVAAGTSKVPYCEFRKKS*SLSTML Trigger: CAGCATCGTGCTCAAGGACAATGATTTCTTGCGGAA...TTCACAGTAAGGAACCTTGCTTGTACCTGCTGCTACCTCCTTCCTTCTGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | CAAGCCAGAAGGAAGGAGGTAGCAGCAGGTACAAGCAAGGTTCCTTACTGTGAAATAACAACCACATCGTaGTTCTCAGCTAGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QARRKEVAAGTSKVPYCEITTTS*FSASRW Trigger: CCACCTGCTAGCTGAGAACAACGATGTGGTTGTTAT...TTCACAGTAAGGAACCTTGCTTGTACCTGCTGCTACCTCCTTCCTTCTGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | CTTGAATCCCAGCACTCAGAAGGCAGATGCAGGTGGATCTTTGTGAGTTCAAGAGGAATGGAGGACGGCTaGTCTATAACAACCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: LESQHSEGRCRWIFVSSRGMEDG*SITTTS Trigger: CGATGTGGTTGTTATAGACAAGCCGTCCTCCATTCC...TCTTGAACTCACAAAGATCCACCTGCATCTGCCTTCTGAGTGCTGGGATTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS-3UTR CAA 90 bp | AGGGTTCAAGATCTGCCTGAGCTAGAGAAACTCAGAAATACTAAGGGGCTTGGAAAGAAATCATTGTCCTaGAGCACGATGCTGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVQDLPELEKLRNTKGLGKKSLS*STMLRS Trigger: GGACCTCAGCATCGTGCTCAAGGACAATGATTTCTT...TCCAAGCCCCTTAGTATTTCTGAGTTTCTCTAGCTCAGGCAGATCTTGAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | ACTGGAGCTGGGGTCTGCTCTCCGTTGCTCGGGAGCTaGCCTTCGCCTCCCTGGGCCTGGTCCCCGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGAGVCSPLLGS*PSPPWAWSPLS Trigger: GGAGAGCGGGGACCAGGCCCAGGGAGGCGAAGGGCAGCTCCCGAGCAACGGAGAGCAGACCCCAGCTCCAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | TGCTCTCCGTTGCTCGGGAGCTGCCCTTCGCCTCCCTaGGCCTGGTCCCCGCTCTCCGGGACCTGCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSPLLGSCPSPP*AWSPLSGTCFP Trigger: AGGGAAGCAGGTCCCGGAGAGCGGGGACCAGGCCCAGGGAGGCGAAGGGCAGCTCCCGAGCAACGGAGAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | CTGAGTCGGCGACTGGAGCTGGGGTCTGCTCTCCGTTaGTCGGGAGCTGCCCTTCGCCTCCCTGGGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSRRLELGSALR*SGAALRLPGPG Trigger: ACCAGGCCCAGGGAGGCGAAGGGCAGCTCCCGAGCAACGGAGAGCAGACCCCAGCTCCAGTCGCCGACTCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | CGGACAAAGCTGTGGGACCAGAGCGCCACCTGCCACTaGACAATGTCCCGTAGGCAGCCCGGGACACCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RTKLWDQSATCH*TMSRRQPGTPR Trigger: GCGGGGTGTCCCGGGCTGCCTACGGGACATTGTGCAGTGGCAGGTGGCGCTCTGGTCCCACAGCTTTGTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | TTCCTCTTGCCTGAGTCGGCGACTGGAGCTGGGGTCTaGTCTCCGTTGCTCGGGAGCTGCCCTTCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLLPESATGAGV*SPLLGSCPSPP Trigger: GGGAGGCGAAGGGCAGCTCCCGAGCAACGGAGAGCAGACCCCAGCTCCAGTCGCCGACTCAGGCAAGAGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 90 bp | GCTCCAGGAGCGGCTCTCCGCTCGTGTTGCTACCAGCATCTCCATTaGGCTGAACCAAAGCCTTCAGCCCGCCCGCTGCCTCGGCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: APGAALRSCCYQHLH*AEPKPSARPLPRLA Trigger: CGCAAGCCGAGGCAGCGGGCGGGCTGAAGGCTTTGGTTCAGCCAAATGGAGATGCTGGTAGCAACACGAGCGGAGAGCCGCTCCTGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 90 bp | TCCATTTGGCTGAACCAAAGCCTTCAGCCCGCCCGCTGCCTCGGCTaGCGCAGACAGTGCCTCAGTCATCGCCTTCCCACAGCTACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SIWLNQSLQPARCLG*RRQCLSHRLPTATP Trigger: TGGGGTAGCTGTGGGAAGGCGATGACTGAGGCACTGTCTGCGCAAGCCGAGGCAGCGGGCGGGCTGAAGGCTTTGGTTCAGCCAAATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | GCCTTCCCACAGCTACCCCAAGTCCGGACAAAGCTGTaGGACCAGAGCGCCACCTGCCACTGCACAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AFPQLPQVRTKL*DQSATCHCTMS Trigger: GGACATTGTGCAGTGGCAGGTGGCGCTCTGGTCCCACAGCTTTGTCCGGACTTGGGGTAGCTGTGGGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | GCGTCCTGCCCGGACAGCGGCCTCGTAGTAAGACAGTaGCTGGGATCGGAACTCGGTGCTGAAGACGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ASCPDSGLVVRQ*LGSELGAEDVQ Trigger: TTGCACGTCTTCAGCACCGAGTTCCGATCCCAGCCACTGTCTTACTACGAGGCCGCTGTCCGGGCAGGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 72 bp | GCGGCTCTCCGCTCGTGTTGCTACCAGCATCTCCATTaGGCTGAACCAAAGCCTTCAGCCCGCCCGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AALRSCCYQHLH*AEPKPSARPLP Trigger: AGGCAGCGGGCGGGCTGAAGGCTTTGGTTCAGCCAAATGGAGATGCTGGTAGCAACACGAGCGGAGAGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 72 bp | CGTAGTAAGACAGTGGCTGGGATCGGAACTCGGTGCTaGAGACGTGCAACAAGCTGCGGCCCACCCAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: RSKTVAGIGTRC*RRATSCGPPSD Trigger: GTCGCTGGGTGGGCCGCAGCTTGTTGCACGTCTTCAGCACCGAGTTCCGATCCCAGCCACTGTCTTACTACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | CTTGCGCAGGCCGCCCTCGAAGTAGTAGGTAGTCTCTaGGAAGTGCTCATCGCTAAAGCTCACCCCGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LAQAALEVVGSL*EVLIAKAHPGA Trigger: CGCACCGGGGTGAGCTTTAGCGATGAGCACTTCGCAGAGACTACCTACTACTTCGAGGGCGGCCTGCGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | GACAGTGGCTGGGATCGGAACTCGGTGCTGAAGACGTaGAACAAGCTGCGGCCCACCCAGCGACCTTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: DSGWDRNSVLKT*NKLRPTQRPLQ Trigger: CTGTAAAGGTCGCTGGGTGGGCCGCAGCTTGTTGCACGTCTTCAGCACCGAGTTCCGATCCCAGCCACTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 72 bp | CTGCAACCAGGTCTCGGAGCAGTTCCTCGTCTGTCTTaGGAATGTGGCCACCCTGGCCTCGAGAAGGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQPGLGAVPRLS*ECGHPGLEKDP Trigger: GGGGTCCTTCTCGAGGCCAGGGTGGCCACATTCCAAAGACAGACGAGGAACTGCTCCGAGACCTGGTTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 72 bp | GGGTGGCCCAGGAATTGGAGGTGGACTCGGATCTGGTaGGTGCGACCTGTAAGTGGTCGGCACTGTACCACA | + |
|
Preference number: 6 (lower is better) Translates to: GWPRNWRWTRIW*VRPVSGRHCTT Trigger: TGTGGTACAGTGCCGACCACTTACAGGTCGCACTCACCAGATCCGAGTCCACCTCCAATTCCTGGGCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | AGGTCTCGGAGCAGTTCCTCGTCTGTCTTTGGAATGTaGCCACCCTGGCCTCGAGAAGGACCCCAGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSRSSSSSVFGM*PPWPREGPQAV Trigger: AACTGCCTGGGGTCCTTCTCGAGGCCAGGGTGGCCACATTCCAAAGACAGACGAGGAACTGCTCCGAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | TGCAACCAGGTCTCGGAGCAGTTCCTCGTCTGTCTTTaGAATGTGGCCACCCTGGCCTCGAGAAGGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: CNQVSEQFLVCL*NVATLASRRTP Trigger: TGGGGTCCTTCTCGAGGCCAGGGTGGCCACATTCCAAAGACAGACGAGGAACTGCTCCGAGACCTGGTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 90 bp | CCTGATGTTCTGCAACCAGGTCTCGGAGCAGTTCCTCGTCTGTCTTaGGAATGTGGCCACCCTGGCCTCGAGAAGGACCCCAGGCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PDVLQPGLGAVPRLS*ECGHPGLEKDPRQL Trigger: CAACTGCCTGGGGTCCTTCTCGAGGCCAGGGTGGCCACATTCCAAAGACAGACGAGGAACTGCTCCGAGACCTGGTTGCAGAACATCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 90 bp | CGGTCCAGCCGATGCAGTGGGTGTAGCTCTTTCAGTTGGTGCTCCTaGCCTAGGATGAAGATGACCGTGTTGTGTCGGAAGCGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: RSSRCSGCSSFSWCS*PRMKMTVLCRKRPQ Trigger: CTGTGGCCGCTTCCGACACAACACGGTCATCTTCATCCTAGGCAAGGAGCACCAACTGAAAGAGCTACACCCACTGCATCGGCTGGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | TCCCCTGCAACCCGGCATACATACTCCTTCTCCAGCTaGCGATCCCGAACCTGCTCATGGATCTTCTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SPATRHTYSFSS*RSRTCSWIFSE Trigger: CTCGGAGAAGATCCATGAGCAGGTTCGGGATCGGCAGCTGGAGAAGGAGTATGTATGCCGGGTTGCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | ATCATTGTCCTTGAGCACGATGCTGAGGTCCTGGACTaGTTCCTCGTTGAGATGCAGGCGTCCTGCCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: IIVLEHDAEVLD*FLVEMQASCPD Trigger: GTCCGGGCAGGACGCCTGCATCTCAACGAGGAACCAGTCCAGGACCTCAGCATCGTGCTCAAGGACAATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | GAGGTGGACTCGGATCTGGTGAGTGCGACCTGTAAGTaGTCGGCACTGTACCACACTGGAGCGGCCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: EVDSDLVSATCK*SALYHTGAAIV Trigger: TACAATGGCCGCTCCAGTGTGGTACAGTGCCGACCACTTACAGGTCGCACTCACCAGATCCGAGTCCACCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 72 bp | TTCTTGCCAGTCATCCCGTGCCCAGGCTGGGATGGGTaGGACGTACTCAAAGTCTGGCCCTTTATAGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: FLPVIPCPGWDG*DVLKVWPFIAE Trigger: CTCCGCTATAAAGGGCCAGACTTTGAGTACGTCTCACCCATCCCAGCCTGGGCACGGGATGACTGGCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | AACATGAGCACTCCTGAGGTGAGGCGGTCCAGCCGATaGAGTGGGTGTAGCTCTTTCAGTTGGTGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NMSTPEVRRSSR*SGCSSFSWCSL Trigger: CAAGGAGCACCAACTGAAAGAGCTACACCCACTGCATCGGCTGGACCGCCTCACCTCAGGAGTGCTCATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 72 bp | TGTAGCCAACCCTTCCAGGCTGTCTTTAGCCAACTCTaGAGAGGGAGCTGTCGAGTCTATGAGCCCTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: CSQPFQAVFSQL*RGSCRVYEPWR Trigger: ACGCCAGGGCTCATAGACTCGACAGCTCCCTCTTCAGAGTTGGCTAAAGACAGCCTGGAAGGGTTGGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | AGCTGCCTTCTCTGGTGTGTCCAGATGCTGAGGGGCTaGCTCAGCTATTCCATCTATCTTCTGGGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SCLLWCVQMLRG*LSYSIYLLGCC Trigger: ACAGCAGCCCAGAAGATAGATGGAATAGCTGAGGCAGCCCCTCAGCATCTGGACACACCAGAGAAGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | GAGCGGGTCTGTTTCTTGAGTCACATCTGCTTTAGCTaGCTTCTCTGGTGTGTCCAGATGCTGAGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ERVCFLSHICFS*LLWCVQMLRGC Trigger: GCAGCCCCTCAGCATCTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTGACTCAAGAAACAGACCCGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | TACTCCTTCTCCAGCTGCCGATCCCGAACCTGCTCATaGATCTTCTCCGAGACTGCAGCTGTCTTCGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: YSFSSCRSRTCS*IFSETAAVFAN Trigger: GTTTGCGAAGACAGCTGCAGTCTCGGAGAAGATCCATGAGCAGGTTCGGGATCGGCAGCTGGAGAAGGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 90 bp | GGGTGCACAGGAATGGAGGACGGCTTGTCTATAACAACCACATCGTaGTTCTCAGCTAGCAGGTGGATAGGCTCTGCTGTGACTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GCTGMEDGLSITTTS*FSASRWIGSAVTGG Trigger: GCCACCAGTCACAGCAGAGCCTATCCACCTGCTAGCTGAGAACAACGATGTGGTTGTTATAGACAAGCCGTCCTCCATTCCTGTGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 90 bp | ATCCTGTCGCAACACTCGGCACTCGGCACAGAGCGGGTCTGTTTCTaGAGTCACATCTGCTTTAGCTGCCTTCTCTGGTGTGTCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: ILSQHSALGTERVCF*SHICFSCLLWCVQM Trigger: CATCTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTGACTCAAGAAACAGACCCGCTCTGTGCCGAGTGCCGAGTGTTGCGACAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | CATACATACTCCTTCTCCAGCTGCCGATCCCGAACCTaGTCATGGATCTTCTCCGAGACTGCAGCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HTYSFSSCRSRT*SWIFSETAAVF Trigger: GAAGACAGCTGCAGTCTCGGAGAAGATCCATGAGCAGGTTCGGGATCGGCAGCTGGAGAAGGAGTATGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | AGGGGCTGCCTCAGCTATTCCATCTATCTTCTGGGCTaGTGTAGCCAACCCTTCCAGGCTGTCTTTAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: RGCLSYSIYLLG*CSQPFQAVFSQ Trigger: TTGGCTAAAGACAGCCTGGAAGGGTTGGCTACAGCAGCCCAGAAGATAGATGGAATAGCTGAGGCAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | CTCGGCACAGAGCGGGTCTGTTTCTTGAGTCACATCTaGTTTAGCTGCCTTCTCTGGTGTGTCCAGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGTERVCFLSHI*FSCLLWCVQML Trigger: CAGCATCTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTGACTCAAGAAACAGACCCGCTCTGTGCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 90 bp | GGTGGCTCATGTCTGTGCACTGTGTTCCGCAAGAAATCATTGTCCTaGAGCACGATGCTGAGGTCCTGGACTGGTTCCTCGTTGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: GGSCLCTVFRKKSLS*STMLRSWTGSSLRC Trigger: GCATCTCAACGAGGAACCAGTCCAGGACCTCAGCATCGTGCTCAAGGACAATGATTTCTTGCGGAACACAGTGCACAGACATGAGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | TCCAGCCGATGCAGTGGGTGTAGCTCTTTCAGTTGGTaGTCCTTGCCTAGGATGAAGATGACCGTGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSRCSGCSSFSW*SLPRMKMTVLC Trigger: ACACAACACGGTCATCTTCATCCTAGGCAAGGAGCACCAACTGAAAGAGCTACACCCACTGCATCGGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS GCA 72 bp | TTCCTTACAAATTACCTCCTTGTCAGGGAACTCCCCTaGAACCCGGCATACATACTCCTTCTCCAGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: FLTNYLLVRELP*NPAYILLLQLP Trigger: CGGCAGCTGGAGAAGGAGTATGTATGCCGGGTTGCAGGGGAGTTCCCTGACAAGGAGGTAATTTGTAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 72 bp | TGTCTGTGCACTGTGTTCCGCAAGAAATCATTGTCCTaGAGCACGATGCTGAGGTCCTGGACTGGTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: CLCTVFRKKSLS*STMLRSWTGSS Trigger: CGAGGAACCAGTCCAGGACCTCAGCATCGTGCTCAAGGACAATGATTTCTTGCGGAACACAGTGCACAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 72 bp | CGATGCAGTGGGTGTAGCTCTTTCAGTTGGTGCTCCTaGCCTAGGATGAAGATGACCGTGTTGTGTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RCSGCSSFSWCS*PRMKMTVLCRK Trigger: CTTCCGACACAACACGGTCATCTTCATCCTAGGCAAGGAGCACCAACTGAAAGAGCTACACCCACTGCATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS TCA 72 bp | TCACAGAGATCTAGCATACTCAGGCTTTCTTTGGCCTaGTGTTCTGCAACCAGGTCTCGGAGCAGTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SQRSSILRLSLA*CSATRSRSSSS Trigger: CGAGGAACTGCTCCGAGACCTGGTTGCAGAACATCAGGCCAAAGAAAGCCTGAGTATGCTAGATCTCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | TGTTTCTTGAGTCACATCTGCTTTAGCTGCCTTCTCTaGTGTGTCCAGATGCTGAGGGGCTGCCTCAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: CFLSHICFSCLL*CVQMLRGCLSY Trigger: ATAGCTGAGGCAGCCCCTCAGCATCTGGACACACCAGAGAAGGCAGCTAAAGCAGATGTGACTCAAGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 72 bp | GGAATGGAGGACGGCTTGTCTATAACAACCACATCGTaGTTCTCAGCTAGCAGGTGGATAGGCTCTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GMEDGLSITTTS*FSASRWIGSAV Trigger: CACAGCAGAGCCTATCCACCTGCTAGCTGAGAACAACGATGTGGTTGTTATAGACAAGCCGTCCTCCATTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | CACTCTCACAGAGATCTAGCATACTCAGGCTTTCTTTaGCCTGATGTTCTGCAACCAGGTCTCGGAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: HSHRDLAYSGFL*PDVLQPGLGAV Trigger: AACTGCTCCGAGACCTGGTTGCAGAACATCAGGCCAAAGAAAGCCTGAGTATGCTAGATCTCTGTGAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CAA 72 bp | GACACCACTAAGATGGGTTCCTTACAAATTACCTCCTaGTCAGGGAACTCCCCTGCAACCCGGCATACATAC | + |
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Preference number: 6 (lower is better) Translates to: DTTKMGSLQITS*SGNSPATRHTY Trigger: GTATGTATGCCGGGTTGCAGGGGAGTTCCCTGACAAGGAGGTAATTTGTAAGGAACCCATCTTAGTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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| CDS CCA 72 bp | CACGGCACACTCCTACCTTGTAAGACACCACTAAGATaGGTTCCTTACAAATTACCTCCTTGTCAGGGAACT | + |
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Preference number: 6 (lower is better) Translates to: HGTLLPCKTPLR*VPYKLPPCQGT Trigger: AGTTCCCTGACAAGGAGGTAATTTGTAAGGAACCCATCTTAGTGGTGTCTTACAAGGTAGGAGTGTGCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028796.2 |
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