Pregenerated sensors for RPUSD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041199Ensembl transcript IDs: ENSMUST00000047273.3, ENSMUST00000237183.2, ENSMUST00000237785.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGAGGTGAGGCCCTGGCAGAGTTCAGGAAAGGCAAAGGCACATaGCAGTGGCGGGCAGCAAGAGACAGGTTGGGGGCTGCAGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RGGEALAEFRKGKGT*QWRAARDRLGAAGD Trigger: GTCACCTGCAGCCCCCAACCTGTCTCTTGCTGCCCGCCACTGTCATGTGCCTTTGCCTTTCCTGAACTCTGCCAGGGCCTCACCTCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR GCA 90 bp | AGCGGCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATaGCTCTGTAGATGCCCCAACACACTCCCATGCATTGGGGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SGIHGRLRGLGMHGG*LCRCPNTLPCIGAK Trigger: CTTGGCCCCAATGCATGGGAGTGTGTTGGGGCATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CCA 90 bp | AGAAGGCTCCCAGGAGAGGACCCGAAGGCTGGCGCTGATAATCTATaGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RRLPGEDPKAGADNL*LCGSQAGGDMSTLQ Trigger: CTGGAGCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGCCAGCCTTCGGGTCCTCTCCTGGGAGCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR GCA 90 bp | CAGAATGCTGTACCAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATaGCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: QNAVPEGKPELPLEK*RAREDLPTGHLSHC Trigger: GCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTGGTACAGCATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR TCA 90 bp | AAGCCTGGGGCTAAAGAGGCAGAATGCTGTACCAGAAGGAAAACCTaGGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTAC | + |
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Preference number: 1 (lower is better) Translates to: KPGAKEAECCTRRKT*ASSGEMPSERRLTY Trigger: GTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTGGTACAGCATTCTGCCTCTTTAGCCCCAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR CCA 90 bp | CCGAAGGCTGGCGCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACGGCACTGTGGGGCCCTaGGGGATCCTCGTTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PKAGADNLWLCGSQAGGDGTVGP*GILVPG Trigger: GCCAGGAACGAGGATCCCCCAGGGCCCCACAGTGCC...GTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGCCAGCCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTTAGAGGACTGGTGCAGGCAGAGGAGGTaGGGCCCTGGCAGAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: QLGAHRTEAASMAGLEDWCRQRR*GPGRVQ Trigger: CTGAACTCTGCCAGGGCCTCACCTCCTCTGCCTGCA...CCAGTCCTCTAAGCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTGGCCTTGCCCTTCCTaGCTAGGGGTTTGGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: MSTLQLGAHRTEAASMAGWPCPS*LGVWAS Trigger: GCTTGCCCAAACCCCTAGCCAGGAAGGGCAAGGCCA...GCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCTCCAGCCCTTCTCAGGCACTGTaGGGCCCTGGGGGATCCTCG | + |
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Preference number: 2 (lower is better) Translates to: IIYGYVEARQVVTCQRSSPSQAL*GPGGSS Trigger: CGAGGATCCCCCAGGGCCCCACAGTGCCTGAGAAGG...GCTGGAGCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCGAGGAGGTGAGGCCCTaGCAGAGTTCAGGAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGDMSTLQLGAHRTEAASEEVRP*QSSGKA Trigger: TGCCTTTCCTGAACTCTGCCAGGGCCTCACCTCCTC...GGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCCACACTCCCATGCATTaGGGCCAAGCGCTAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: GGDMSTLQLGAHRTEAASHTPMH*GQALDA Trigger: TGCATCTAGCGCTTGGCCCCAATGCATGGGAGTGTG...GGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR GCA 90 bp | GCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCCCGAAAACCCTGTCCTCATGGCTGCCTAGCTaGTGGATGGTGTGGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: AREDLPTGHLSHCPKTLSSWLPS*WMVWFS Trigger: TGAGAACCACACCATCCAGCAGCTAGGCAGCCATGA...GGACAGGGTTTTCGGGCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCTCCAGCAAGAGACAGGTTaGGGGCTGCAGGTGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: ADNLWLCGSQAGGDMSTLQQETG*GLQVTQ Trigger: TTGGGTCACCTGCAGCCCCCAACCTGTCTCTTGCTG...GAGCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCTCCAGCAAAGGCAAAGGCACATaGCAGTGGCGGGCAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: IIYGYVEARQVVTCQRSSKGKGT*QWRAAR Trigger: TCTTGCTGCCCGCCACTGTCATGTGCCTTTGCCTTT...GCTGGAGCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGTCATGGCTGCCTAGCTaGTGGATGGTGTGGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SGEMPSERRLTYWASLPLSWLPS*WMVWFS Trigger: TGAGAACCACACCATCCAGCAGCTAGGCAGCCATGA...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTACAGCCAGGGTGCTGTGGCTGTGTTGTGGCAGACATGTGAGGCCCAGAGCTAAAGAGGCAGAATaGTGTACCAGAAGGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: LATARVLWLCCGRHVRPRAKEAE*CTRRKT Trigger: GGTTTTCCTTCTGGTACAGCATTCTGCCTCTTTAGC...TCTGGGCCTCACATGTCTGCCACAACACAGCCACAGCACCCTGGCTGTAGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR GCA 90 bp | TACCAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTCATGGCTGCCTAGCTaGTGGATGGTGTGGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: YQKENLSFLWRNAEREKTSWLPS*WMVWFS Trigger: TGAGAACCACACCATCCAGCAGCTAGGCAGCCATGA...AGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATGCTAAAGAGGCAGAATaGTGTACCAGAAGGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: ASMAGLEDWACMEDASVDAKEAE*CTRRKT Trigger: GGTTTTCCTTCTGGTACAGCATTCTGCCTCTTTAGC...ATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CCA 72 bp | GCAGGTGACCCAAGTCCAGGTAGGCTAATGCCAGGATaGTCCTTCTCAGGCACTGTGGGGCCCTGGGGGATC | + |
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Preference number: 3 (lower is better) Translates to: AGDPSPGRLMPG*SFSGTVGPWGI Trigger: GATCCCCCAGGGCCCCACAGTGCCTGAGAAGGACCATCCTGGCATTAGCCTACCTGGACTTGGGTCACCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR TCA 72 bp | GAGGCCCTGGCAGAGTTCAGGAAAGGCAAAGGCACATaGCAGTGGCGGGCAGCAAGAGACAGGTTGGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: EALAEFRKGKGT*QWRAARDRLGA Trigger: AGCCCCCAACCTGTCTCTTGCTGCCCGCCACTGTCATGTGCCTTTGCCTTTCCTGAACTCTGCCAGGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR TCA 72 bp | GCATTGGGGCCAAGCGCTAGATGCAGGCAGAGGAGGTaGGGCCCTGGCAGAGTTCAGGAAAGGCAAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: ALGPSARCRQRR*GPGRVQERQRH Trigger: GTGCCTTTGCCTTTCCTGAACTCTGCCAGGGCCTCACCTCCTCTGCCTGCATCTAGCGCTTGGCCCCAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CCA 72 bp | GACCCTAGCTACAGCCAGGGTGCTGTGGCTGTGTTGTaGCAGACATGTGAGGCCCAGAAGGCTCCCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: DPSYSQGAVAVL*QTCEAQKAPRR Trigger: TCTCCTGGGAGCCTTCTGGGCCTCACATGTCTGCCACAACACAGCCACAGCACCCTGGCTGTAGCTAGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR-3UTR CAA 90 bp | CCGAAGGCTGGCGCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACGCAGCAAGAGACAGGTaGGGGGCTGCAGGTGACCCA | + |
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Preference number: 3 (lower is better) Translates to: PKAGADNLWLCGSQAGGDAARDR*GAAGDP Trigger: TGGGTCACCTGCAGCCCCCAACCTGTCTCTTGCTGC...GTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGCCAGCCTTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR GCA 72 bp | AGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATaGCCCAACACACTCCCATGCATTGGGGCCAAGCGC | + |
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Preference number: 3 (lower is better) Translates to: RGLGMHGGCLCR*PNTLPCIGAKR Trigger: GCGCTTGGCCCCAATGCATGGGAGTGTGTTGGGGCATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CCA 72 bp | CCTCGTTCCTGGCCTTGCCCTTCCTGGCTAGGGGTTTaGGCAAGCCTGGGGCTAAAGAGGCAGAATGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: PRSWPCPSWLGV*ASLGLKRQNAV Trigger: TACAGCATTCTGCCTCTTTAGCCCCAGGCTTGCCCAAACCCCTAGCCAGGAAGGGCAAGGCCAGGAACGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR GCA 72 bp | GAAGCGGCATCCATGGCAGGCTTAGAGGACTGGGCATaGATGGAGGATGCCTCTGTAGATGCCCCAACACAC | + |
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Preference number: 3 (lower is better) Translates to: EAASMAGLEDWA*MEDASVDAPTH Trigger: GTGTGTTGGGGCATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGCCGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR GCA 72 bp | GCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTaGCCGAAAACCCTGTCCTCAGCAATCATGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: AREDLPTGHLSH*PKTLSSAIMAA Trigger: GGCAGCCATGATTGCTGAGGACAGGGTTTTCGGGCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CCA 72 bp | TCTCCCACTGCCCGAAAACCCTGTCCTCAGCAATCATaGCTGCCTAGCTGCTGGATGGTGTGGTTCTCAACC | + |
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Preference number: 3 (lower is better) Translates to: SPTARKPCPQQS*LPSCWMVWFST Trigger: GGTTGAGAACCACACCATCCAGCAGCTAGGCAGCCATGATTGCTGAGGACAGGGTTTTCGGGCAGTGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CCA 72 bp | CCAGGAGAGGACCCGAAGGCTGGCGCTGATAATCTATaGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCA | + |
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Preference number: 3 (lower is better) Translates to: PGEDPKAGADNL*LCGSQAGGDMS Trigger: TGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGCCAGCCTTCGGGTCCTCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR GCA 72 bp | CATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATaGCTCTGTAGATGCCCCAACACACTCCCATGCATT | + |
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Preference number: 3 (lower is better) Translates to: HGRLRGLGMHGG*LCRCPNTLPCI Trigger: AATGCATGGGAGTGTGTTGGGGCATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR GCA 72 bp | GTACCAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATaGCGAGCGAGAGAAGACTTACCTACTGGGCATCTC | + |
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Preference number: 3 (lower is better) Translates to: VPEGKPELPLEK*RAREDLPTGHL Trigger: GAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CCA 72 bp | AGAATGCTGTACCAGAAGGAAAACCTGAGCTTCCTCTaGAGAAATGCCGAGCGAGAGAAGACTTACCTACTG | + |
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Preference number: 3 (lower is better) Translates to: RMLYQKENLSFL*RNAEREKTYLL Trigger: CAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTGGTACAGCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | CCGAAGGCTGGCGCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACGTGGGGTGGAGGGGCTaGAGGGCCTTGGCCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PKAGADNLWLCGSQAGGDVGWRG*RALALH Trigger: GTGGAGGGCCAAGGCCCTGCAGCCCCTCCACCCCAC...GTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGCCAGCCTTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | ATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCGTGGGGTGGAGGGGCTaGAGGGCCTTGGCCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: MSTLQLGAHRTEAASMAGVGWRG*RALALH Trigger: GTGGAGGGCCAAGGCCCTGCAGCCCCTCCACCCCAC...GCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | CACACTCCCATGCATTGGGGCCAAGCGCTAGATGCAGGCAGAGGAGGTGAGGCCGCGTCCGCCCCTCCGTaGTATTCCTGCCAATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: HTPMHWGQALDAGRGGEAASAPP*YSCQWH Trigger: ATGCCATTGGCAGGAATAGCACGGAGGGGCGGACGC...GGCCTCACCTCCTCTGCCTGCATCTAGCGCTTGGCCCCAATGCATGGGAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGGCAGGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGTGGGGTGGAGGGGCTaGAGGGCCTTGGCCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SQAGGDMSTLQLGAHRTEVGWRG*RALALH Trigger: GTGGAGGGCCAAGGCCCTGCAGCCCCTCCACCCCAC...TTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACCTGCCTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GCCCTGGGGGATCCTCGTTCCTGGCCTTGCCCTTCCTGGCTAGGGGTTTGGGCATCAGTCCTCAGGGCCTaGATGAGCTGTTCAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ALGDPRSWPCPSWLGVWASVLRA*MSCSRG Trigger: ACCCCTTGAACAGCTCATCCAGGCCCTGAGGACTGA...TGCCCAAACCCCTAGCCAGGAAGGGCAAGGCCAGGAACGAGGATCCCCCAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTTAGAGGACTGGGGGGCTGCAGGGCCTTaGCCCTCCACTCATAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: QLGAHRTEAASMAGLEDWGAAGP*PSTHRV Trigger: GACCCTATGAGTGGAGGGCCAAGGCCCTGCAGCCCC...CCAGTCCTCTAAGCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | TTGCCCTTCCTGGCTAGGGGTTTGGGCAAGCCTGGGGCTAAAGAGGCAGAATGCAGGGTCAGCCAGCTCTaGGAAGTGGTGTCGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPFLARGLGKPGAKEAECRVSQL*EVVSEL Trigger: CAGCTCCGACACCACTTCCCAGAGCTGGCTGACCCT...GCATTCTGCCTCTTTAGCCCCAGGCTTGCCCAAACCCCTAGCCAGGAAGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | TGCCCTTCCTGGCTAGGGGTTTGGGCAAGCCTGGGGCTAAAGAGGCAGAATGCTACAGTGCCCCACTGGTaGAGAAGTCCAGCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CPSWLGVWASLGLKRQNATVPHW*RSPAGG Trigger: GCCACCAGCTGGACTTCTCCACCAGTGGGGCACTGT...AGCATTCTGCCTCTTTAGCCCCAGGCTTGCCCAAACCCCTAGCCAGGAAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | ATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTGCCCTCGATGCACATaGTATGCGTCCGCCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: MSTLQLGAHRTEAASMAGCPRCT*YASAPP Trigger: CGGAGGGGCGGACGCATACCATGTGCATCGAGGGCA...GCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CACACTCCCATGCATTGGGGCCAAGCGCTAGATGCAGGCAGAGGAGGTGAGGCCTCAGTCCTCAGGGCCTaGATGAGCTGTTCAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HTPMHWGQALDAGRGGEASVLRA*MSCSRG Trigger: ACCCCTTGAACAGCTCATCCAGGCCCTGAGGACTGA...GGCCTCACCTCCTCTGCCTGCATCTAGCGCTTGGCCCCAATGCATGGGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGGCAGGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGGGGCTGCAGGGCCTTaGCCCTCCACTCATAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQAGGDMSTLQLGAHRTEGAAGP*PSTHRV Trigger: GACCCTATGAGTGGAGGGCCAAGGCCCTGCAGCCCC...TTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACCTGCCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| 3UTR CAA 72 bp | TCCTCGTTCCTGGCCTTGCCCTTCCTGGCTAGGGGTTaGGGCAAGCCTGGGGCTAAAGAGGCAGAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFLALPFLARG*GKPGAKEAECC Trigger: ACAGCATTCTGCCTCTTTAGCCCCAGGCTTGCCCAAACCCCTAGCCAGGAAGGGCAAGGCCAGGAACGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR TCA 90 bp | TGCCCTTCCTGGCTAGGGGTTTGGGCAAGCCTGGGGCTAAAGAGGCAGAATGCTGCTGGTGGCAGAACCTaGACCCATAGCAGGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSWLGVWASLGLKRQNAAGGRT*THSRCQ Trigger: CTGACACCTGCTATGGGTTCAGGTTCTGCCACCAGC...AGCATTCTGCCTCTTTAGCCCCAGGCTTGCCCAAACCCCTAGCCAGGAAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | CCGAAGGCTGGCGCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACGCACGATGCTCTCTGTaGCTCAGTCTCAGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKAGADNLWLCGSQAGGDARCSL*LSLRRG Trigger: CCCCCTCCTGAGACTGAGGCACAGAGAGCATCGTGC...GTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGCCAGCCTTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | ATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCGCACGATGCTCTCTGTaGCTCAGTCTCAGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MSTLQLGAHRTEAASMAGARCSL*LSLRRG Trigger: CCCCCTCCTGAGACTGAGGCACAGAGAGCATCGTGC...GCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTTAGAGGACTGGAGGGTCAGCCAGCTCTaGGAAGTGGTGTCGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLGAHRTEAASMAGLEDWRVSQL*EVVSEL Trigger: CAGCTCCGACACCACTTCCCAGAGCTGGCTGACCCT...CCAGTCCTCTAAGCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCACAGTGCCCCACTGGTaGAGAAGTCCAGCTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGDMSTLQLGAHRTEAASTVPHW*RSPAGG Trigger: GCCACCAGCTGGACTTCTCCACCAGTGGGGCACTGT...GGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATTGCCCTCGATGCACATaGTATGCGTCCGCCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASMAGLEDWACMEDASVDCPRCT*YASAPP Trigger: CGGAGGGGCGGACGCATACCATGTGCATCGAGGGCA...ATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTCAGGAAAGGCAAAGGCACATGACAGTGGCGGGCAGCAAGAGACAGGTGCGTCCGCCCCTCCGTaGTATTCCTGCCAATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSSGKAKAHDSGGQQETGASAPP*YSCQWH Trigger: ATGCCATTGGCAGGAATAGCACGGAGGGGCGGACGC...ACCTGTCTCTTGCTGCCCGCCACTGTCATGTGCCTTTGCCTTTCCTGAACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTCGATGCACATGGTATaGGTCCGCCCCTCCGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MSTLQLGAHRTEAASMAGSMHMV*VRPSVL Trigger: TAGCACGGAGGGGCGGACGCATACCATGTGCATCGA...GCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATTCACCCACGATAGGGTaGCCAAGGGCACTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASMAGLEDWACMEDASVDSPTIG*PRALQC Trigger: GCACTGCAGTGCCCTTGGCCACCCTATCGTGGGTGA...ATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCCCGAAAACTCACCCACGATAGGGTaGCCAAGGGCACTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPSERRLTYWASLPLPENSPTIG*PRALQC Trigger: GCACTGCAGTGCCCTTGGCCACCCTATCGTGGGTGA...GTTTTCGGGCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCAGGGCTACGCACAGTaGCCCACTGGTGGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGEMPSERRLTYWASLPLQGYAQ*PTGGEV Trigger: GACTTCTCCACCAGTGGGGCACTGTGCGTAGCCCTG...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | GCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATCTGCCTGTGTGGGGATaGGTAGGTAGAAGGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASMAGLEDWACMEDASVDLPVWG*VGRRRA Trigger: TGCACGCCTTCTACCTACGCATCCCCACACAGGCAG...ATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGGCACGATGCTCTCTGTaGCTCAGTCTCAGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGEMPSERRLTYWASLPLARCSL*LSLRRG Trigger: CCCCCTCCTGAGACTGAGGCACAGAGAGCATCGTGC...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | ATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCGTGGAGAAGTCCAGCTaGTGGCAGAACCTGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSTLQLGAHRTEAASMAGVEKSS*WQNLNP Trigger: TGGGTTCAGGTTCTGCCACCAGCTGGACTTCTCCAC...GCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCGTCACTTGGCTTTCCTaGACATGGCCTCGGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGDMSTLQLGAHRTEAASVTWLS*TWPRTS Trigger: ACTGGTCCGAGGCCATGTCCAGGAAAGCCAAGTGAC...GGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GCGCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCTCACCCACGATAGGGTaGCCAAGGGCACTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALIIYGYVEARQVVTCQRSPTIG*PRALQC Trigger: GCACTGCAGTGCCCTTGGCCACCCTATCGTGGGTGA...GCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCTCAGTCCTCAGGGCCTaGATGAGCTGTTCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGDMSTLQLGAHRTEAASSVLRA*MSCSRG Trigger: ACCCCTTGAACAGCTCATCCAGGCCCTGAGGACTGA...GGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACGGGGCTGCAGGGCCTTaGCCCTCCACTCATAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKENLSFLWRNAEREKTYGAAGP*PSTHRV Trigger: GACCCTATGAGTGGAGGGCCAAGGCCCTGCAGCCCC...GTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | AACCCTGTCCTCAGCAATCATGGCTGCCTAGCTGCTGGATGGTGTGGTTCTCAATCGATGCACATGGTATaGGTCCGCCCCTCCGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NPVLSNHGCLAAGWCGSQSMHMV*VRPSVL Trigger: TAGCACGGAGGGGCGGACGCATACCATGTGCATCGA...TTGAGAACCACACCATCCAGCAGCTAGGCAGCCATGATTGCTGAGGACAGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | AACCCTGTCCTCAGCAATCATGGCTGCCTAGCTGCTGGATGGTGTGGTTCTCAACCAAGGGCACTGCAGTaGACACGAAGCTGGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NPVLSNHGCLAAGWCGSQPRALQ*TRSWCV Trigger: GACACACCAGCTTCGTGTGCACTGCAGTGCCCTTGG...TTGAGAACCACACCATCCAGCAGCTAGGCAGCCATGATTGCTGAGGACAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCTGCCTGTGTGGGGATaGGTAGGTAGAAGGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGEMPSERRLTYWASLPLLPVWG*VGRRRA Trigger: TGCACGCCTTCTACCTACGCATCCCCACACAGGCAG...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCCCGAAAACCCTGTCCCAGCTCTGTGAGGCTTaGCTTTGGGTTCTCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: AREDLPTGHLSHCPKTLSQLCEA*LWVLTT Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGAGCTG...GGACAGGGTTTTCGGGCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GAAGACTTACCTACTGGGCATCTCTCCCACTGCCCGAAAACCCTGTCCTCAGCACAGTGCACACGAAGCTaGTGTGTCCGGCCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDLPTGHLSHCPKTLSSAQCTRS*CVRPVS Trigger: ACTTACAGGCCGGACACACCAGCTTCGTGTGCACTG...TGCTGAGGACAGGGTTTTCGGGCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | ATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCCCGAAAACCAGTGCACACGAAGCTaGTGTGTCCGGCCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MPSERRLTYWASLPLPENQCTRS*CVRPVS Trigger: ACTTACAGGCCGGACACACCAGCTTCGTGTGCACTG...GTTTTCGGGCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATATCATGCGGAAAGGTTaGTCCTCCTGGTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASMAGLEDWACMEDASVDIMRKG*SSWSSA Trigger: GGCTGAGGACCAGGAGGACCAACCTTTCCGCATGAT...ATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCCACCAGGAAGTCGCTaGTCTGGTACACGATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SGEMPSERRLTYWASLPLPPGSR*SGTRWT Trigger: TGTCCATCGTGTACCAGAGCAGCGACTTCCTGGTGG...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGATGCGCAGGTCCCAGTaGTTGTTCACCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGEMPSERRLTYWASLPLMRRSQ*LFTTRK Trigger: CTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCAT...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | GCGCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCATGCGCAGGTCCCAGTaGTTGTTCACCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALIIYGYVEARQVVTCQRMRRSQ*LFTTRK Trigger: CTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCAT...GCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATCAGCTCTGTGAGGCTTaGCTTTGGGTTCTCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: ASMAGLEDWACMEDASVDQLCEA*LWVLTT Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGAGCTG...ATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTTAGAGGACTGGGCTTTAGCAGCACTTTaGACACAGGGTCACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLGAHRTEAASMAGLEDWALAAL*TQGHQH Trigger: ATGCTGGTGACCCTGTGTCCAAAGTGCTGCTAAAGC...CCAGTCCTCTAAGCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | GGTGGTGACATGTCAACGCTCCAGCTAGGAGCCCATAGAACAGAAGCGGCATCCGCTTTAGCAGCACTTTaGACACAGGGTCACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGDMSTLQLGAHRTEAASALAAL*TQGHQH Trigger: ATGCTGGTGACCCTGTGTCCAAAGTGCTGCTAAAGC...GGATGCCGCTTCTGTTCTATGGGCTCCTAGCTGGAGCGTTGACATGTCACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | AACCCTGTCCTCAGCAATCATGGCTGCCTAGCTGCTGGATGGTGTGGTTCTCAAATCATGCGGAAAGGTTaGTCCTCCTGGTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPVLSNHGCLAAGWCGSQIMRKG*SSWSSA Trigger: GGCTGAGGACCAGGAGGACCAACCTTTCCGCATGAT...TTGAGAACCACACCATCCAGCAGCTAGGCAGCCATGATTGCTGAGGACAGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR TCA 90 bp | TACCAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTGCTGGTGGCAGAACCTaGACCCATAGCAGGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YQKENLSFLWRNAEREKTAGGRT*THSRCQ Trigger: CTGACACCTGCTATGGGTTCAGGTTCTGCCACCAGC...AGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR GCA 90 bp | GCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCTCCCACCAGGAAGTCGCTaGTCTGGTACACGATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ADNLWLCGSQAGGDMSTLPPGSR*SGTRWT Trigger: TGTCCATCGTGTACCAGAGCAGCGACTTCCTGGTGG...GAGCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCATGGCAGGCTTAGAGGACTGGGCATGCATGGAGGATGCCTCTGTAGATAGGTCTTGCTATCAATaGGCAGGTCCCAGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASMAGLEDWACMEDASVDRSCYQ*AGPSAC Trigger: ACAAGCACTGGGACCTGCGCATTGATAGCAAGACCT...ATCTACAGAGGCATCCTCCATGCATGCCCAGTCCTCTAAGCCTGCCATGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACAGGGCTACGCACAGTaGCCCACTGGTGGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KENLSFLWRNAEREKTYLQGYAQ*PTGGEV Trigger: GACTTCTCCACCAGTGGGGCACTGTGCGTAGCCCTG...TAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACCCAAGGGCACTGCAGTaGACACGAAGCTGGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKENLSFLWRNAEREKTYPRALQ*TRSWCV Trigger: GACACACCAGCTTCGTGTGCACTGCAGTGCCCTTGG...GTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGCCCGAAAACCCTGTCCTGTGAGGCTTGGCTTTaGGTTCTCACAACCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AREDLPTGHLSHCPKTLSCEAWL*VLTTMS Trigger: ACTCATGGTTGTGAGAACCCAAAGCCAAGCCTCACA...GGACAGGGTTTTCGGGCAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTGTCCTCAGCAATCATGGCTGCCTAGCTGCTGGATGGTGTGGTTCTCAACAGCTCTGTGAGGCTTaGCTTTGGGTTCTCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: NPVLSNHGCLAAGWCGSQQLCEA*LWVLTT Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGAGCTG...TTGAGAACCACACCATCCAGCAGCTAGGCAGCCATGATTGCTGAGGACAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
||
| CDS-3UTR CCA 90 bp | GTACCAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACCAGTGCACACGAAGCTaGTGTGTCCGGCCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPEGKPELPLEKCRAREDQCTRS*CVRPVS Trigger: ACTTACAGGCCGGACACACCAGCTTCGTGTGCACTG...GTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGGCTTTAGCAGCACTTTaGACACAGGGTCACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGEMPSERRLTYWASLPLALAAL*TQGHQH Trigger: ATGCTGGTGACCCTGTGTCCAAAGTGCTGCTAAAGC...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTCTTAATCCTAGACCCTAGCTACAGCCAGGGTGCTGTGGCTGTGTTGGTCACTTGGCTTTCCTaGACATGGCCTCGGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLFLILDPSYSQGAVAVLVTWLS*TWPRTS Trigger: ACTGGTCCGAGGCCATGTCCAGGAAAGCCAAGTGAC...CAACACAGCCACAGCACCCTGGCTGTAGCTAGGGTCTAGGATTAAGAATAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | AACCCTGTCCTCAGCAATCATGGCTGCCTAGCTGCTGGATGGTGTGGTTCTCAATGTGAGGCTTGGCTTTaGGTTCTCACAACCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPVLSNHGCLAAGWCGSQCEAWL*VLTTMS Trigger: ACTCATGGTTGTGAGAACCCAAAGCCAAGCCTCACA...TTGAGAACCACACCATCCAGCAGCTAGGCAGCCATGATTGCTGAGGACAGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACAGGAAGTCGCTGCTCTaGTACACGATGGACAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QKENLSFLWRNAEREKTYRKSLL*YTMDRF Trigger: AAATCTGTCCATCGTGTACCAGAGCAGCGACTTCCT...GTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTCTTAATCCTAGACCCTAGCTACAGCCAGGGTGCTGTGGCTGTGTTGAGGAAGTCGCTGCTCTaGTACACGATGGACAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: HLFLILDPSYSQGAVAVLRKSLL*YTMDRF Trigger: AAATCTGTCCATCGTGTACCAGAGCAGCGACTTCCT...CAACACAGCCACAGCACCCTGGCTGTAGCTAGGGTCTAGGATTAAGAATAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CCA 90 bp | AAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTATGTGAGGCTTGGCTTTaGGTTCTCACAACCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KENLSFLWRNAEREKTYLCEAWL*VLTTMS Trigger: ACTCATGGTTGTGAGAACCCAAAGCCAAGCCTCACA...TAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | AGGGGTCAGGCGTACAGGCCTCCACGCGCTCTGCCTGTGTGGGGATaGGTAGGTAGAAGGCGTGCAGCATCATGCGGAAAGGTTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGQAYRPPRALPVWG*VGRRRAASCGKVGP Trigger: AGGACCAACCTTTCCGCATGATGCTGCACGCCTTCTACCTACGCATCCCCACACAGGCAGAGCGCGTGGAGGCCTGTACGCCTGACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS CCA 90 bp | GCAGGAAGGGGTCAGGCGTACAGGCCTCCACGCGCTCTGCCTGTGTaGGGATGCGTAGGTAGAAGGCGTGCAGCATCATGCGGAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGRGQAYRPPRALPV*GCVGRRRAASCGKV Trigger: AACCTTTCCGCATGATGCTGCACGCCTTCTACCTACGCATCCCCACACAGGCAGAGCGCGTGGAGGCCTGTACGCCTGACCCCTTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTTGCCCTTCCTGGCTAGGGGTTTGGGCAAGCCTGGGGCTAAAGAGGCAGCGCAGGTCCCAGTGCTaGTTCACCACCAGGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WPCPSWLGVWASLGLKRQRRSQC*FTTRKS Trigger: CGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCG...CTGCCTCTTTAGCCCCAGGCTTGCCCAAACCCCTAGCCAGGAAGGGCAAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | CACACTCCCATGCATTGGGGCCAAGCGCTAGATGCAGGCAGAGGAGGTGAGGCCCGCAGGTCCCAGTGCTaGTTCACCACCAGGAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HTPMHWGQALDAGRGGEARRSQC*FTTRKS Trigger: CGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCG...GGCCTCACCTCCTCTGCCTGCATCTAGCGCTTGGCCCCAATGCATGGGAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | GTCAGGGTCTCCCGCCAGGTCTTGCTATCAATGCGCAGGTCCCAGTaGTTGTTCACCACCAGGAAGTCGCTGCTCTGGTACACGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRVSRQVLLSMRRSQ*LFTTRKSLLWYTMD Trigger: GTCCATCGTGTACCAGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | GCTGCTTCTGTAGGGTCAGGGTCTCCCGCCAGGTCTTGCTATCAATaGGCAGGTCCCAGTGCTTGTTCACCACCAGGAAGTCGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AASVGSGSPARSCYQ*AGPSACSPPGSRCS Trigger: AGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCTGACCCTACAGAAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | GGTGTCGGAGCTGCTTCTGTAGGGTCAGGGTCTCCCGCCAGGTCTTaGTATCAATGCGCAGGTCCCAGTGCTTGTTCACCACCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVGAASVGSGSPARS*YQCAGPSACSPPGS Trigger: ACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCTGACCCTACAGAAGCAGCTCCGACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | GCTCTGCCTGTGTGGGGATGCGTAGGTAGAAGGCGTGCAGCATCATaGGGAAAGGTTGGTCCTCCTGGTCCTCAGCCTGGCCATAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPVWGCVGRRRAAS*GKVGPPGPQPGHKS Trigger: TGACTTATGGCCAGGCTGAGGACCAGGAGGACCAACCTTTCCGCATGATGCTGCACGCCTTCTACCTACGCATCCCCACACAGGCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | CAGCTAGGAGCCCATAGAACAGAAGCGGCATCCATGGCAGGCTTAGAGGACTGGGTCTCCCGCCAGGTCTaGCTATCAATGCGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLGAHRTEAASMAGLEDWVSRQV*LSMRRS Trigger: GGACCTGCGCATTGATAGCAAGACCTGGCGGGAGAC...CCAGTCCTCTAAGCCTGCCATGGATGCCGCTTCTGTTCTATGGGCTCCTAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS TCA 90 bp | TGGTATGCGTCCGCCCCTCCGTGCTATTCCTGCCAATGGCATAGTTaGTCGTCACTTGGCTTTCCTGGACATGGCCTCGGACCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WYASAPPCYSCQWHS*SSLGFPGHGLGPVP Trigger: TGGCACTGGTCCGAGGCCATGTCCAGGAAAGCCAAGTGACGATCAACTATGCCATTGGCAGGAATAGCACGGAGGGGCGGACGCATACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS TCA 90 bp | CAGGGTCACCAGCATATAGGCCGTGTTCCAGGACCAGCAGCTCTGTaGGGCTTGGCTTTGGGTTCTCACAACCATGAGTGCCCTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: QGHQHIGRVPGPAAL*GLALGSHNHECPRC Trigger: GCATCGAGGGCACTCATGGTTGTGAGAACCCAAAGCCAAGCCTCACAGAGCTGCTGGTCCTGGAACACGGCCTATATGCTGGTGACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | TTTATAAGCACTGCCCGCAGCTGCCTTATTCAGGGCTACGCACAGTaGCCCACTGGTGGAGAAGTCCAGCTGGTGGCAGAACCTGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: FISTARSCLIQGYAQ*PTGGEVQLVAEPEP Trigger: GGGTTCAGGTTCTGCCACCAGCTGGACTTCTCCACCAGTGGGGCACTGTGCGTAGCCCTGAATAAGGCAGCTGCGGGCAGTGCTTATAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CCA 90 bp | TCACCCACGATAGGGTGGCCAAGGGCACTGCAGTGCACACGAAGCTaGTGTGTCCGGCCTGTAAGTGGCTTTAGCAGCACTTTGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: SPTIGWPRALQCTRS*CVRPVSGFSSTLDT Trigger: TGTGTCCAAAGTGCTGCTAAAGCCACTTACAGGCCGGACACACCAGCTTCGTGTGCACTGCAGTGCCCTTGGCCACCCTATCGTGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | GGTGACTCGCCGTTCCTTGAAGCATTTATAAGCACTGCCCGCAGCTaGCTTATTCAGGGCTACGCACAGTGCCCCACTGGTGGAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GDSPFLEAFISTARS*LIQGYAQCPTGGEV Trigger: GACTTCTCCACCAGTGGGGCACTGTGCGTAGCCCTGAATAAGGCAGCTGCGGGCAGTGCTTATAAATGCTTCAAGGAACGGCGAGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | GCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCTCGTCTCCCGCCAGGTCTaGCTATCAATGCGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ADNLWLCGSQAGGDMSTLVSRQV*LSMRRS Trigger: GGACCTGCGCATTGATAGCAAGACCTGGCGGGAGAC...GAGCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | TATCAATGCGCAGGTCCCAGTGCTTGTTCACCACCAGGAAGTCGCTaGTCTGGTACACGATGGACAGATTTTCCATGCTGCCAGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YQCAGPSACSPPGSR*SGTRWTDFPCCQAP Trigger: TGGAGCCTGGCAGCATGGAAAATCTGTCCATCGTGTACCAGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | TCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTACTGGGCATCTCTCCCACTGGAGCTGTTCAAGGGGTaGAACACAGGTACTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SGEMPSERRLTYWASLPLELFKG*NTGTGT Trigger: AGTCCCAGTACCTGTGTTCAACCCCTTGAACAGCTC...CAGTGGGAGAGATGCCCAGTAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | GCGCTGATAATCTATGGCTATGTGGAAGCCAGGCAGGTGGTGACATGTCAACGCGAGCTGTTCAAGGGGTaGAACACAGGTACTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ALIIYGYVEARQVVTCQRELFKG*NTGTGT Trigger: AGTCCCAGTACCTGTGTTCAACCCCTTGAACAGCTC...GCGTTGACATGTCACCACCTGCCTGGCTTCCACATAGCCATAGATTATCAGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS GCA 90 bp | ATAGTTGATCGTCACTTGGCTTTCCTGGACATGGCCTCGGACCAGTaGCAGGTAGGCTTTGGTGACTCGCCGTTCCTTGAAGCATTTATA | + |
|
Preference number: 5 (lower is better) Translates to: IVDRHLAFLDMASDQ*QVGFGDSPFLEAFI Trigger: TATAAATGCTTCAAGGAACGGCGAGTCACCAAAGCCTACCTGGCACTGGTCCGAGGCCATGTCCAGGAAAGCCAAGTGACGATCAACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | AAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACCTAGGCTTTAGCAGCACTTaGGACACAGGGTCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KENLSFLWRNAEREKTYLGFSST*DTGSPA Trigger: TGCTGGTGACCCTGTGTCCAAAGTGCTGCTAAAGCC...TAGGTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGGAAAACCTGAGCTTCCTCTGGAGAAATGCCGAGCGAGAGAAGACTTACGAGCTGTTCAAGGGGTaGAACACAGGTACTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: QKENLSFLWRNAEREKTYELFKG*NTGTGT Trigger: AGTCCCAGTACCTGTGTTCAACCCCTTGAACAGCTC...GTAAGTCTTCTCTCGCTCGGCATTTCTCCAGAGGAAGCTCAGGTTTTCCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS CCA 72 bp | GGGGCTGCAGGGCCTTGGCCCTCCACTCATAGGGTCTaGGTCAGGGTCAGTCCTCAGGGCCTGGATGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAAGPWPSTHRV*VRVSPQGLDEL Trigger: CAGCTCATCCAGGCCCTGAGGACTGACCCTGACCCAGACCCTATGAGTGGAGGGCCAAGGCCCTGCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS CCA 72 bp | GGTCAGGCGTACAGGCCTCCACGCGCTCTGCCTGTGTaGGGATGCGTAGGTAGAAGGCGTGCAGCATCATGC | + |
|
Preference number: 6 (lower is better) Translates to: GQAYRPPRALPV*GCVGRRRAASC Trigger: GCATGATGCTGCACGCCTTCTACCTACGCATCCCCACACAGGCAGAGCGCGTGGAGGCCTGTACGCCTGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | TCAGGGTCAGCCAGCTCTGGGAAGTGGTGTCGGAGCTaGTTCTGTAGGGTCAGGGTCTCCCGCCAGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSASSGKWCRS*FCRVRVSRQVL Trigger: CAAGACCTGGCGGGAGACCCTGACCCTACAGAAGCAGCTCCGACACCACTTCCCAGAGCTGGCTGACCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CAA 90 bp | TGGGTCAGGGTCAGTCCTCAGGGCCTGGATGAGCTGTTCAAGGGGTaGAACACAGGTACTGGGACTCCAGCAGGCATCGAGGGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WVRVSPQGLDELFKG*NTGTGTPAGIEGRQ Trigger: CTGCCTGCCCTCGATGCCTGCTGGAGTCCCAGTACCTGTGTTCAACCCCTTGAACAGCTCATCCAGGCCCTGAGGACTGACCCTGACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | ACTGCCCGCAGCTGCCTTATTCAGGGCTACGCACAGTaGCCCACTGGTGGAGAAGTCCAGCTGGTGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TARSCLIQGYAQ*PTGGEVQLVAE Trigger: TTCTGCCACCAGCTGGACTTCTCCACCAGTGGGGCACTGTGCGTAGCCCTGAATAAGGCAGCTGCGGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | GTGTGGGGATGCGTAGGTAGAAGGCGTGCAGCATCATaGGGAAAGGTTGGTCCTCCTGGTCCTCAGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VWGCVGRRRAAS*GKVGPPGPQPG Trigger: GCCAGGCTGAGGACCAGGAGGACCAACCTTTCCGCATGATGCTGCACGCCTTCTACCTACGCATCCCCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS CAA 90 bp | TGGTGTCGGAGCTGCTTCTGTAGGGTCAGGGTCTCCCGCCAGGTCTaGCTATCAATGCGCAGGTCCCAGTGCTTGTTCACCACCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WCRSCFCRVRVSRQV*LSMRRSQCLFTTRK Trigger: CTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCTGACCCTACAGAAGCAGCTCCGACACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CAA 90 bp | AGGGTCTCCCGCCAGGTCTTGCTATCAATGCGCAGGTCCCAGTGCTaGTTCACCACCAGGAAGTCGCTGCTCTGGTACACGATGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVSRQVLLSMRRSQC*FTTRKSLLWYTMDR Trigger: TCTGTCCATCGTGTACCAGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS TCA 72 bp | TCAGTCCTCAGGGCCTGGATGAGCTGTTCAAGGGGTTaGACACAGGTACTGGGACTCCAGCAGGCATCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVLRAWMSCSRG*TQVLGLQQASR Trigger: CCTCGATGCCTGCTGGAGTCCCAGTACCTGTGTTCAACCCCTTGAACAGCTCATCCAGGCCCTGAGGACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | TCCCGCCAGGTCTTGCTATCAATGCGCAGGTCCCAGTaGTTGTTCACCACCAGGAAGTCGCTGCTCTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SRQVLLSMRRSQ*LFTTRKSLLWY Trigger: GTACCAGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | GTAGGGTCAGGGTCTCCCGCCAGGTCTTGCTATCAATaGGCAGGTCCCAGTGCTTGTTCACCACCAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VGSGSPARSCYQ*AGPSACSPPGS Trigger: ACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCTGACCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | GCTGCTTCTGTAGGGTCAGGGTCTCCCGCCAGGTCTTaGTATCAATGCGCAGGTCCCAGTGCTTGTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AASVGSGSPARS*YQCAGPSACSP Trigger: TGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCTGACCCTACAGAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CCA 72 bp | ATAGGGTGGCCAAGGGCACTGCAGTGCACACGAAGCTaGTGTGTCCGGCCTGTAAGTGGCTTTAGCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: IGWPRALQCTRS*CVRPVSGFSST Trigger: AGTGCTGCTAAAGCCACTTACAGGCCGGACACACCAGCTTCGTGTGCACTGCAGTGCCCTTGGCCACCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS CAA 72 bp | CGCCAGGTCTTGCTATCAATGCGCAGGTCCCAGTGCTaGTTCACCACCAGGAAGTCGCTGCTCTGGTACACG | + |
|
Preference number: 6 (lower is better) Translates to: RQVLLSMRRSQC*FTTRKSLLWYT Trigger: CGTGTACCAGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CAA 72 bp | AGCTGCTTCTGTAGGGTCAGGGTCTCCCGCCAGGTCTaGCTATCAATGCGCAGGTCCCAGTGCTTGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SCFCRVRVSRQV*LSMRRSQCLFT Trigger: GGTGAACAAGCACTGGGACCTGCGCATTGATAGCAAGACCTGGCGGGAGACCCTGACCCTACAGAAGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CAA 72 bp | GTCAGTCCTCAGGGCCTGGATGAGCTGTTCAAGGGGTaGAACACAGGTACTGGGACTCCAGCAGGCATCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSPQGLDELFKG*NTGTGTPAGIE Trigger: CTCGATGCCTGCTGGAGTCCCAGTACCTGTGTTCAACCCCTTGAACAGCTCATCCAGGCCCTGAGGACTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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| CDS TCA 72 bp | TCCGCCCCTCCGTGCTATTCCTGCCAATGGCATAGTTaGTCGTCACTTGGCTTTCCTGGACATGGCCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAPPCYSCQWHS*SSLGFPGHGLG Trigger: TCCGAGGCCATGTCCAGGAAAGCCAAGTGACGATCAACTATGCCATTGGCAGGAATAGCACGGAGGGGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | TTGGCTTTGGGTTCTCACAACCATGAGTGCCCTCGATaGACATGGTATGCGTCCGCCCCTCCGTGCTATTCC | + |
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Preference number: 6 (lower is better) Translates to: LALGSHNHECPR*TWYASAPPCYS Trigger: GGAATAGCACGGAGGGGCGGACGCATACCATGTGCATCGAGGGCACTCATGGTTGTGAGAACCCAAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CCA 72 bp | TTGGGTTCTCACAACCATGAGTGCCCTCGATGCACATaGTATGCGTCCGCCCCTCCGTGCTATTCCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LGSHNHECPRCT*YASAPPCYSCQ Trigger: TTGGCAGGAATAGCACGGAGGGGCGGACGCATACCATGTGCATCGAGGGCACTCATGGTTGTGAGAACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | GCAGGTCCCAGTGCTTGTTCACCACCAGGAAGTCGCTaGTCTGGTACACGATGGACAGATTTTCCATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AGPSACSPPGSR*SGTRWTDFPCC Trigger: GCAGCATGGAAAATCTGTCCATCGTGTACCAGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS GCA 72 bp | CCGTTCCTTGAAGCATTTATAAGCACTGCCCGCAGCTaGCTTATTCAGGGCTACGCACAGTGCCCCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: PFLEAFISTARS*LIQGYAQCPTG Trigger: ACCAGTGGGGCACTGTGCGTAGCCCTGAATAAGGCAGCTGCGGGCAGTGCTTATAAATGCTTCAAGGAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CCA 72 bp | TCCCAGTGCTTGTTCACCACCAGGAAGTCGCTGCTCTaGTACACGATGGACAGATTTTCCATGCTGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SQCLFTTRKSLL*YTMDRFSMLPG Trigger: GCCTGGCAGCATGGAAAATCTGTCCATCGTGTACCAGAGCAGCGACTTCCTGGTGGTGAACAAGCACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047273.3 ENSMUST00000237785.2 |
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| CDS CAA 72 bp | TGGTGTGTCCGGCCTGTAAGTGGCTTTAGCAGCACTTaGGACACAGGGTCACCAGCATATAGGCCGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: WCVRPVSGFSST*DTGSPAYRPCS Trigger: GGAACACGGCCTATATGCTGGTGACCCTGTGTCCAAAGTGCTGCTAAAGCCACTTACAGGCCGGACACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047273.3 ENSMUST00000237183.2 ENSMUST00000237785.2 |
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