RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPTOR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025583

Ensembl transcript IDs: ENSMUST00000026671.13, ENSMUST00000124401.2, ENSMUST00000131217.2, ENSMUST00000136662.8, ENSMUST00000139728.8, ENSMUST00000147781.8

Found 532 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGCCCCTCCTCAGCTGGCCACGGCCAAGTCAGGAGCCGGGGTTTaGAGGTGGGTGGGTAGGTGGGCACTGCATCCGAGCAGTGCAGGC +
Preference number: 1 (lower is better)
Translates to: QAPPQLATAKSGAGV*RWVGRWALHPSSAG
Trigger: GCCTGCACTGCTCGGATGCAGTGCCCACCTACCCACCCACCTGCAAACCCCGGCTCCTGACTTGGCCGTGGCCAGCTGAGGAGGGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp CCTCCTCAGCTGGCCACGGCCAAGTCAGGAGCCGGGGTTTGCAGGTaGGTGGGTAGGTGGGCACTGCATCCGAGCAGTGCAGGCTGGCTC +
Preference number: 1 (lower is better)
Translates to: PPQLATAKSGAGVCR*VGRWALHPSSAGWL
Trigger: GAGCCAGCCTGCACTGCTCGGATGCAGTGCCCACCTACCCACCCACCTGCAAACCCCGGCTCCTGACTTGGCCGTGGCCAGCTGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 90 bp CTGTGGGGCCGGCAGTACCCGGGCGGCTGGAAGGCAGGTCACGGCTaGCAGTCTGCTTGGCCACATCATTGGTCAGGCTGCAGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: LWGRQYPGGWKAGHG*QSAWPHHWSGCSCW
Trigger: CCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCCGGGTACTGCCGGCCCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR GCA 90 bp CATCTTTCGTGTTCGAGGGAACTGGTGGGAGTGAGGGGTGTACTGTaGCCCTGTGGGGCCGGCAGTACCCGGGCGGCTGGAAGGCAGGTC +
Preference number: 1 (lower is better)
Translates to: HLSCSRELVGVRGVL*PCGAGSTRAAGRQV
Trigger: GACCTGCCTTCCAGCCGCCCGGGTACTGCCGGCCCCACAGGGGCACAGTACACCCCTCACTCCCACCAGTTCCCTCGAACACGAAAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR CCA 90 bp CTGCAGGAGGGAACTGCAGGTAGGGCTAGGAGGAGTGGGCTGAACTaGAGCTGGCAGCCCTGCCCTTGGGCGGAGCCTCAAGAGGACACC +
Preference number: 1 (lower is better)
Translates to: LQEGTAGRARRSGLN*SWQPCPWAEPQEDT
Trigger: GGTGTCCTCTTGAGGCTCCGCCCAAGGGCAGGGCTGCCAGCTCCAGTTCAGCCCACTCCTCCTAGCCCTACCTGCAGTTCCCTCCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 90 bp CGTTCTCAGGGCTCCCCAAGGTGCTGCTGGCACTGCTGCTGGTGCTaGGGTTCCCGGGAGAGAAGGCCACTGAGCTGCCCGATTCTTCCG +
Preference number: 1 (lower is better)
Translates to: RSQGSPRCCWHCCWC*GSRERRPLSCPILP
Trigger: CGGAAGAATCGGGCAGCTCAGTGGCCTTCTCTCCCGGGAACCTCAGCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCCCTGAGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp TGCAGGTGGGTGGGTAGGTGGGCACTGCATCCGAGCAGTGCAGGCTaGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGGTC +
Preference number: 1 (lower is better)
Translates to: CRWVGRWALHPSSAG*LTMYSRGGCGLAVV
Trigger: GACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCTGCACTGCTCGGATGCAGTGCCCACCTACCCACCCACCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp CGCATCAGACTTGTGAGGCCCAGCCTGTGGGCAAGATGCAAACACTaGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCC +
Preference number: 1 (lower is better)
Translates to: RIRLVRPSLWARCKH*FHQGREAAQPIRRP
Trigger: GGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 90 bp CCGGCAGTACCCGGGCGGCTGGAAGGCAGGTCACGGCTGACAGTCTaGTTGGCCACATCATTGGTCAGGCTGCAGCTGCTGGTGCTAGAT +
Preference number: 1 (lower is better)
Translates to: PAVPGRLEGRSRLTV*LATSLVRLQLLVLD
Trigger: ATCTAGCACCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCCGGGTACTGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp CAGGGCAGGAAAGGACCATGCTGCACTGAGGAGGTCCTTGGTGCCTaGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: QGRKGPCCTEEVLGA*VLVLDGKPGQPLPC
Trigger: GCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 90 bp CCAGGCAAATGGCCACCCACTGGCGTAGCAAGGGGTGTGGGTCGCTaGGCTGCTCCAGACAGATGGCAATCAGGTTTCCCTGGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: PGKWPPTGVARGVGR*AAPDRWQSGFPGGR
Trigger: CCTGCCTCCAGGGAAACCTGATTGCCATCTGTCTGGAGCAGCTCAGCGACCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR GCA 90 bp GCAGGAAAGGACCATGCTGCACTGAGGAGGTCCTTGGTGCCTGGGTaGTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: AGKDHAALRRSLVPG*WFLMGSQANPSPAL
Trigger: CAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 90 bp CGGCTCGGATGTTCCCATAGGAGCTCACTGAACGGAGTCTGGGGGTaGATGGGCTGTCTCGAACTGGGGTCAAGCTCCCTCCCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: RLGCSHRSSLNGVWG*MGCLELGSSSLPLW
Trigger: CCACAGAGGGAGGGAGCTTGACCCCAGTTCGAGACAGCCCATGCACCCCCAGACTCCGTTCAGTGAGCTCCTATGGGAACATCCGAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp GGAAAGGACCATGCTGCACTGAGGAGGTCCTTGGTGCCTGGGTGCTaGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTCTGGAC +
Preference number: 1 (lower is better)
Translates to: GKDHAALRRSLVPGC*FLMGSQANPSPALD
Trigger: GTCCAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCAGCATGGTCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp TCCATTTCCCAGGACTGGCAGCACACTCTGAGAGGACAGTGGGGCTaGGCCATGGCCCTTAGGAGCCCCAGCACGGCTATTCTACAGGGC +
Preference number: 1 (lower is better)
Translates to: SISQDWQHTLRGQWG*AMALRSPSTAILQG
Trigger: GCCCTGTAGAATAGCCGTGCTGGGGCTCCTAAGGGCCATGGCCCAGCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp TGGCGGGGAGCCTCCCACCTGGTGCATGTGCATGCCCTTGTTGGTTaGGCTGGCTGGGGCCGACTGTGTGAGAGAGGATGTGTCAAGGAT +
Preference number: 1 (lower is better)
Translates to: WRGASHLVHVHALVG*AGWGRLCERGCVKD
Trigger: ATCCTTGACACATCCTCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp ACTGCATCCGAGCAGTGCAGGCTGGCTCACTATGTACAGCAGAGGTaGCTGCGGCCTGGCAGTGGTCCTAGGTGCCGCTATCTGACACGC +
Preference number: 1 (lower is better)
Translates to: TASEQCRLAHYVQQR*LRPGSGPRCRYLTR
Trigger: GCGTGTCAGATAGCGGCACCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCTGCACTGCTCGGATGCAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 90 bp GCATGTGCATGCCCTTGTTGGTTGGGCTGGCTGGGGCCGACTGTGTaGGAGAGGATGTGTCAAGGATTCGTTGGGGCCGGGCGTTCACTG +
Preference number: 1 (lower is better)
Translates to: ACACPCWLGWLGPTV*ERMCQGFVGAGRSL
Trigger: CAGTGAACGCCCGGCCCCAACGAATCCTTGACACATCCTCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 90 bp TTCCTTGAGCCCCACCCGGTTGGGAGAATGCATTTCCAGGGGCCGTaGCAGGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTA +
Preference number: 1 (lower is better)
Translates to: FLEPHPVGRMHFQGP*QGLLFCLPRTAQPV
Trigger: TACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGGGCTCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 90 bp CAAATGGCCACCCACTGGCGTAGCAAGGGGTGTGGGTCGCTGAGCTaGTCCAGACAGATGGCAATCAGGTTTCCCTGGAGGCAGGCCTCT +
Preference number: 1 (lower is better)
Translates to: QMATHWRSKGCGSLS*SRQMAIRFPWRQAS
Trigger: AGAGGCCTGCCTCCAGGGAAACCTGATTGCCATCTGTCTGGAGCAGCTCAGCGACCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR CCA 90 bp CACGAGGTCAGCTTGGCACGACTGCAGGACGATGGGCAGCTGCTCTaGGGGGCTCCTGTTTTCCACACCCATTGTGAGCCACACCTGGAA +
Preference number: 1 (lower is better)
Translates to: HEVSLARLQDDGQLL*GAPVFHTHCEPHLE
Trigger: TTCCAGGTGTGGCTCACAATGGGTGTGGAAAACAGGAGCCCCCCAGAGCAGCTGCCCATCGTCCTGCAGTCGTGCCAAGCTGACCTCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000139728.8
3UTR GCA 90 bp GCAATGCTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCACTTaGCTGTGCACACAGACACATGTCGGACACACGGGGACAGTGCTG +
Preference number: 1 (lower is better)
Translates to: AMLGPSRAAVPKVLT*LCTQTHVGHTGTVL
Trigger: CAGCACTGTCCCCGTGTGTCCGACATGTGTCTGTGTGCACAGGCAAGTGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp GCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGTCCCTaGGCTCCTGTTGGCACTTGTCCTCTGAAAGATCCTGATTCCCAG +
Preference number: 1 (lower is better)
Translates to: AQGPSLCHRCPNPCP*APVGTCPLKDPDSQ
Trigger: CTGGGAATCAGGATCTTTCAGAGGACAAGTGCCAACAGGAGCCCAGGGACACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp ATGGAGGGAGGCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTaGGGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGCATT +
Preference number: 1 (lower is better)
Translates to: MEGGRQGTYQAIRFA*GWMSRAVSPFTICI
Trigger: AATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGCCTCCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CCA 90 bp GAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCACCCACTaGCGTAGCAAGGGGTGTGGGTCGCTGAGCTGCTCCAGACAGATG +
Preference number: 1 (lower is better)
Translates to: ESKFCQILPRQMATH*RSKGCGSLSCSRQM
Trigger: CATCTGTCTGGAGCAGCTCAGCGACCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR TCA 90 bp GTTCCTAGCTGTCGTGACGGCTCGGATGTTCCCATAGGAGCTCACTaGACGGAGTCTGGGGGTGCATGGGCTGTCTCGAACTGGGGTCAA +
Preference number: 1 (lower is better)
Translates to: VPSCRDGSDVPIGAH*TESGGAWAVSNWGQ
Trigger: TTGACCCCAGTTCGAGACAGCCCATGCACCCCCAGACTCCGTTCAGTGAGCTCCTATGGGAACATCCGAGCCGTCACGACAGCTAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp GTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGCTaGCCACGGCCAAGTCAGGAGCCGGGGTTTGCAGGTGGGTGGGTA +
Preference number: 1 (lower is better)
Translates to: VIVKTEGRMCKPLLS*PRPSQEPGFAGGWV
Trigger: TACCCACCCACCTGCAAACCCCGGCTCCTGACTTGGCCGTGGCCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp GGAGGCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTaGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGCATTACATTC +
Preference number: 1 (lower is better)
Translates to: GGRQGTYQAIRFAWG*MSRAVSPFTICITF
Trigger: GAATGTAATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 90 bp CTGATGGCACCATCATCTGTGGCTGTCAGCAGCAAGGAACAGTCCTaGCCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGAGGG +
Preference number: 1 (lower is better)
Translates to: LMAPSSVAVSSKEQS*PFRYSMAVTLVYRG
Trigger: CCCTCGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGACTGTTCCTTGCTGCTGACAGCCACAGATGATGGTGCCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR TCA 90 bp ACTCGAGTGTTCCTCAGGAACCGCCACTCACGCTCCTTGCGGATCTaGCTCTCTAGGTCATGCTCCTCGGGGATCTTCATGACTGGCTGG +
Preference number: 1 (lower is better)
Translates to: TRVFLRNRHSRSLRI*LSRSCSSGIFMTGW
Trigger: CCAGCCAGTCATGAAGATCCCCGAGGAGCATGACCTAGAGAGTCAGATCCGCAAGGAGCGTGAGTGGCGGTTCCTGAGGAACACTCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 90 bp TTGAATTTCCGCATCAGACTTGTGAGGCCCAGCCTGTGGGCAAGATaGAAACACTGGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATC +
Preference number: 1 (lower is better)
Translates to: LNFRIRLVRPSLWAR*KHWFHQGREAAQPI
Trigger: GATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCGGAAATTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 90 bp CAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGATGTCCTaGACCTTCGTCTCCCGGTCAGTATCCCAGATCCTGACAATGCGC +
Preference number: 1 (lower is better)
Translates to: QDRLVTQLSAPVGMS*TFVSRSVSQILTMR
Trigger: GCGCATTGTCAGGATCTGGGATACTGACCGGGAGACGAAGGTGCAGGACATCCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 90 bp ACACGGATCGAGCCATCACCCAGGCCAGCCACAATGAGCGAACGGTaGGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTG +
Preference number: 1 (lower is better)
Translates to: TRIEPSPRPATMSER*ESQDRLVTQLSAPV
Trigger: CACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGGGTGATGGCTCGATCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 90 bp TTTGCCTGGGGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTaGATTACATTCACAGACTCGGGCATCCGAGGGTCGAAGAAGCGC +
Preference number: 1 (lower is better)
Translates to: FAWGWMSRAVSPFTI*ITFTDSGIRGSKKR
Trigger: GCGCTTCTTCGACCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 90 bp CTGTGGAGGACAGAGACAAAGGCTGTACACTCTGAAAGGGCCTTCTaGTTAGAAACAGGGGGCTGCATGGAGGGAGGCAGGCAGGGTACC +
Preference number: 1 (lower is better)
Translates to: LWRTETKAVHSERAF*LETGGCMEGGRQGT
Trigger: GGTACCCTGCCTGCCTCCCTCCATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGTCTCTGTCCTCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 90 bp TGGGCACTGTCTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTaGCAGATCCTTCCCAGGCAAATGGCCACCCACTGGCGTAGCAAG +
Preference number: 1 (lower is better)
Translates to: WALSLTPHHLAESKF*QILPRQMATHWRSK
Trigger: CTTGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR TCA 90 bp CTTGCCTGTGCACACAGACACATGTCGGACACACGGGGACAGTGCTaGCATCTAGGGCTACAGTGTCCATGGTCCTCTCTTGCCTGTGCA +
Preference number: 1 (lower is better)
Translates to: LACAHRHMSDTRGQC*HLGLQCPWSSLACA
Trigger: TGCACAGGCAAGAGAGGACCATGGACACTGTAGCCCTAGATGTCAGCACTGTCCCCGTGTGTCCGACATGTGTCTGTGTGCACAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 90 bp AGCAGAGGTGGCTGCGGCCTGGCAGTGGTCCTAGGTGCCGCTATCTaGCACGCTTCTCCACCGAATACACGGAAATGTAGTAGTCATTGC +
Preference number: 1 (lower is better)
Translates to: SRGGCGLAVVLGAAI*HASPPNTRKCSSHC
Trigger: GCAATGACTACTACATTTCCGTGTATTCGGTGGAGAAGCGTGTCAGATAGCGGCACCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 90 bp GCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTaGTCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: AWVLVLDGKPGQPLP*SGPVRCYSEDRRKD
Trigger: ATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 90 bp CAGGAAGACCAGGGCATCCATGTAATTATGGATGGGGAGGCTGCGTaGCTGCATGCGTGTGTACCTGTGTGTGGCACAAGCAGGAGACAG +
Preference number: 1 (lower is better)
Translates to: QEDQGIHVIMDGEAA*LHACVPVCGTSRRQ
Trigger: CTGTCTCCTGCTTGTGCCACACACAGGTACACACGCATGCAGGCACGCAGCCTCCCCATCCATAATTACATGGATGCCCTGGTCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 90 bp AAGGCTGTACACTCTGAAAGGGCCTTCTGCTTAGAAACAGGGGGCTaGATGGAGGGAGGCAGGCAGGGTACCTACCAGGCGATCAGGTTT +
Preference number: 1 (lower is better)
Translates to: KAVHSERAFCLETGG*MEGGRQGTYQAIRF
Trigger: AAACCTGATCGCCTGGTAGGTACCCTGCCTGCCTCCCTCCATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CCA 90 bp CAAAGGTGCCCAGGGCAAATACAGCTGCACATCGGACCTCAGGGATaGGGTCAGAGAGGAGGCTATAGAGCTTTTCGTGGGCACTGTCTC +
Preference number: 1 (lower is better)
Translates to: QRCPGQIQLHIGPQG*GQRGGYRAFRGHCL
Trigger: GAGACAGTGCCCACGAAAAGCTCTATAGCCTCCTCTCTGACCCCATCCCTGAGGTCCGATGTGCAGCTGTATTTGCCCTGGGCACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp ATGGCTGTGAACTGGTTCATGGAGCCACAGGCGATCAGGTTTGCCTaGGGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGCATT +
Preference number: 1 (lower is better)
Translates to: MAVNWFMEPQAIRFA*GWMSRAVSPFTICI
Trigger: AATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGTGGCTCCATGAACCAGTTCACAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 90 bp AGGATCCTCTCACAGGGAAGATGCTCTTGGCTAAAACAGGTCCACTaGACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACC +
Preference number: 1 (lower is better)
Translates to: RILSQGRCSWLKQVH*TQHRDPASATDVPT
Trigger: GGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGTTTTAGCCAAGAGCATCTTCCCTGTGAGAGGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 90 bp TCCTGTCGTAGACACGGATCGAGCCATCACCCAGGCCAGCCACAATaGGCGAACGGTGCGAATCACAAGACAGACTTGTCACACAGCTGT +
Preference number: 1 (lower is better)
Translates to: SCRRHGSSHHPGQPQ*ANGANHKTDLSHSC
Trigger: ACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGGGTGATGGCTCGATCCGTGTCTACGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR TCA 90 bp GATTTTGGCCCAGATGAAGACAAGGAGTGGCCGAAGCTCTCGGGCTaGGCTCTGAAGCAGCTTCAGTACATAGGGGAAGATGCCCACCGA +
Preference number: 1 (lower is better)
Translates to: DFGPDEDKEWPKLSG*ALKQLQYIGEDAHR
Trigger: TCGGTGGGCATCTTCCCCTATGTACTGAAGCTGCTTCAGAGCTCAGCCCGAGAGCTTCGGCCACTCCTTGTCTTCATCTGGGCCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 90 bp ACCACCAGCTCCTTCCGGACCATGGGGCTTCCATCATTGATCAGCTaGGCCAGCATCATGGCCACATTGTGGTCAATGGTGGTAGAGTGG +
Preference number: 1 (lower is better)
Translates to: TTSSFRTMGLPSLIS*ASIMATLWSMVVEW
Trigger: CCACTCTACCACCATTGACCACAATGTGGCCATGATGCTGGCTCAGCTGATCAATGATGGAAGCCCCATGGTCCGGAAGGAGCTGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 90 bp TCAGCTGGCATGTATGGGTCTGCCAAGACGGATAGGAAGTACTTGTaGCCGTTGTCCTTCACGAGGTCAGCTTGGCACGACTGCAGGACG +
Preference number: 1 (lower is better)
Translates to: SAGMYGSAKTDRKYL*PLSFTRSAWHDCRT
Trigger: CGTCCTGCAGTCGTGCCAAGCTGACCTCGTGAAGGACAACGGTCACAAGTACTTCCTATCCGTCTTGGCAGACCCATACATGCCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139728.8
3UTR GCA 90 bp CCTCTCAGCAGAATTTCCCACAAAGGTGCCCAGGGCAAATACAGCTaGACATCGGACCTCAGGGATGGGGTCAGAGAGGAGGCTATAGAG +
Preference number: 1 (lower is better)
Translates to: PLSRISHKGAQGKYS*TSDLRDGVREEAIE
Trigger: CTCTATAGCCTCCTCTCTGACCCCATCCCTGAGGTCCGATGTGCAGCTGTATTTGCCCTGGGCACCTTTGTGGGAAATTCTGCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp GTGAACTGGTTCATGGAGCCACAGGCGATCAGGTTTGCCTGGGGGTaGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGCATTACATTC +
Preference number: 1 (lower is better)
Translates to: VNWFMEPQAIRFAWG*MSRAVSPFTICITF
Trigger: GAATGTAATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGTGGCTCCATGAACCAGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 90 bp TCAGCAGCAAGGAACAGTCCTGACCATTCAGGTACTCCATGGCGGTaGCCCTGGTGTACCGAGGGTTGCCATTGTGGAAATAGTCCAGCT +
Preference number: 1 (lower is better)
Translates to: SAARNSPDHSGTPWR*PWCTEGCHCGNSPA
Trigger: AGCTGGACTATTTCCACAATGGCAACCCTCGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGACTGTTCCTTGCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR TCA 90 bp GTTTCTGTCTGTGGGGTCAACTTGAAGCAGCCAGACAGTGAAAGGTaGAGGTTGACCCCACTGAGCCTTCTCTCTAGCCCTGGGTGCCAT +
Preference number: 1 (lower is better)
Translates to: VSVCGVNLKQPDSER*RLTPLSLLSSPGCH
Trigger: ATGGCACCCAGGGCTAGAGAGAAGGCTCAGTGGGGTCAACCTTCACCTTTCACTGTCTGGCTGCTTCAAGTTGACCCCACAGACAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 90 bp GCTATAGAGCTTTTCGTGGGCACTGTCTCTCACCCCACACCATCTTaGAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCAC +
Preference number: 1 (lower is better)
Translates to: AIELFVGTVSHPTPS*RVEVLPDPSQANGH
Trigger: GTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCACGAAAAGCTCTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR CCA 90 bp CAGAGGTCTAGCTTTCCTCATAGCACCATGACATACACAATGTGCTaGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCCATA +
Preference number: 1 (lower is better)
Translates to: QRSSFPHSTMTYTMC*TASVLQEGQAQTSI
Trigger: TATGGAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGTATGTCATGGTGCTATGAGGAAAGCTAGACCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 90 bp TCTTTCAAAGGTCCTGTGGAGGACAGAGACAAAGGCTGTACACTCTaGAAGGGCCTTCTGCTTAGAAACAGGGGGCTGCATGGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: SFKGPVEDRDKGCTL*KGLLLRNRGLHGGR
Trigger: CCTCCCTCCATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGTCTCTGTCCTCCACAGGACCTTTGAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 90 bp TCAGCTGGCATGTATGGGTCTGCCAAGACGGATAGGAAGTACTTGTaGCCGTTGTCCTTCACGAGGTCAGCTTGGCACGAACTGTCGACA +
Preference number: 1 (lower is better)
Translates to: SAGMYGSAKTDRKYL*PLSFTRSAWHELST
Trigger: TGTCGACAGTTCGTGCCAAGCTGACCTCGTGAAGGACAACGGTCACAAGTACTTCCTATCCGTCTTGGCAGACCCATACATGCCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 90 bp CCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTaGCCTATGGGAGAGAAGCACTTCAGAATATGCCTGATAGATGGA +
Preference number: 1 (lower is better)
Translates to: PVCGTSRRQACGHCY*PMGEKHFRICLIDG
Trigger: TCCATCTATCAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 90 bp AAATGCGCTCTAGGTCAGCGCTCTCTCGAGCTTTGCTTAGCTTCATaGTTGAATTTCCGCATCAGACTTGTGAGGCCCAGCCTGTGGGCA +
Preference number: 1 (lower is better)
Translates to: KCALGQRSLELCLAS*LNFRIRLVRPSLWA
Trigger: TGCCCACAGGCTGGGCCTCACAAGTCTGATGCGGAAATTCAATCATGAAGCTAAGCAAAGCTCGAGAGAGCGCTGACCTAGAGCGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 90 bp CAGATGCTGTCCTTGTCGGCGACAGCTATGCATGGTGTAAAGGGATaGAATTTGACCACAGAAGGAACGCCGGGGTTCCTGTTCAGAAAG +
Preference number: 1 (lower is better)
Translates to: QMLSLSATAMHGVKG*NLTTEGTPGFLFRK
Trigger: CTTTCTGAACAGGAACCCCGGCGTTCCTTCTGTGGTCAAATTCCATCCCTTTACACCATGCATAGCTGTCGCCGACAAGGACAGCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR CCA 90 bp CCAGTCCCAAAAACAGATGCTGTCCTTGTCGGCGACAGCTATGCATaGTGTAAAGGGATGGAATTTGACCACAGAAGGAACGCCGGGGTT +
Preference number: 1 (lower is better)
Translates to: PVPKTDAVLVGDSYA*CKGMEFDHRRNAGV
Trigger: AACCCCGGCGTTCCTTCTGTGGTCAAATTCCATCCCTTTACACCATGCATAGCTGTCGCCGACAAGGACAGCATCTGTTTTTGGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 90 bp AAGGGCAGCGACATCTCACGGCTTTATTCTTTATTAACACTCTGTTaGTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAG +
Preference number: 1 (lower is better)
Translates to: KGSDISRLYSLLTLC*CHCSGRHCSSVSCQ
Trigger: CTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAGAGTGTTAATAAAGAATAAAGCCGTGAGATGTCGCTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 90 bp ACTTCATGCTCACTGAGCAATCTGGACTTATTACTGGCAGTGGGGTaGCCTCTGCCATCTGGAAGGAGCTTGAATAGTGCTAAGGAGAGG +
Preference number: 1 (lower is better)
Translates to: TSCSLSNLDLLLAVG*PLPSGRSLNSAKER
Trigger: CCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCCCACTGCCAGTAATAAGTCCAGATTGCTCAGTGAGCATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 90 bp ACCATCCCAGCTCCTCGTGTTGTTGGAAGCATGTCTGAGAGCCCTTaGCACGCAGTCACCATCTCTGGATTCTTTTCCAAATCAGCAAAA +
Preference number: 1 (lower is better)
Translates to: TIPAPRVVGSMSESP*HAVTISGFFSKSAK
Trigger: TTTTGCTGATTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGCTTCCAACAACACGAGGAGCTGGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR TCA 90 bp CCATCTCTGGATTCTTTTCCAAATCAGCAAAATTCTTCCAGACCCTaGTGGCACCATCATCTGTGGCTGTCAGCAGCAAGGAACAGTCCT +
Preference number: 1 (lower is better)
Translates to: PSLDSFPNQQNSSRP*WHHHLWLSAARNSP
Trigger: AGGACTGTTCCTTGCTGCTGACAGCCACAGATGATGGTGCCATCAGGGTCTGGAAGAATTTTGCTGATTTGGAAAAGAATCCAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR TCA 90 bp CTGTGGCTGCTGGAGAAGGCAAAGGGTAGTTCTTTTCTTCCTCCATaGACTGCAGGGCCACAGTGCAGAAATTGCTTTCATATTGGACTA +
Preference number: 1 (lower is better)
Translates to: LWLLEKAKGSSFLPP*TAGPQCRNCFHIGL
Trigger: TAGTCCAATATGAAAGCAATTTCTGCACTGTGGCCCTGCAGTTCATGGAGGAAGAAAAGAACTACCCTTTGCCTTCTCCAGCAGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 90 bp ATGGCCCTTAGGAGCCCCAGCACGGCTATTCTACAGGGCGCTGTCTaGTCTGTAACTAATGCTTTGATCACATGGAAAAATCAAATGTGT +
Preference number: 1 (lower is better)
Translates to: MALRSPSTAILQGAV*SVTNALITWKNQMC
Trigger: ACACATTTGATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCCCTGTAGAATAGCCGTGCTGGGGCTCCTAAGGGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCCTGTGCGGCCAACTGGCAGCACACTCTaGGAGGACAGTGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GSTRAGKQPSPSGGPVRPTGSTL*EDSGAG
Trigger: CCCAGCCCCACTGTCCTCTCAGAGTGTGCTGCCAGT...TGGCCGCACAGGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCCTGTGCGGCCACAGGGACCCAGCCTCTaGCACAGATGTCCCAACCCG +
Preference number: 2 (lower is better)
Translates to: GSTRAGKQPSPSGGPVRPQGPSL*HRCPNP
Trigger: CGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTG...TGGCCGCACAGGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCCTGTGCGGCCACTGGGTGCTGGTTCTTaGTGGGAAGCCAGGCCAACC +
Preference number: 2 (lower is better)
Translates to: GSTRAGKQPSPSGGPVRPLGAGS*WEARPT
Trigger: GGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAG...TGGCCGCACAGGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGGCTCCCCAAGGTGCTGCTGGCACTGCTGCTGGTGCTGAGGTTCCCGGGAGAGAGGACCATGCTGCACTaGGGAGGTCCTTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: GLPKVLLALLLVLRFPGERTMLH*GGPWCL
Trigger: CAGGCACCAAGGACCTCCTCAGTGCAGCATGGTCCT...CTCTCCCGGGAACCTCAGCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GGGCTCCCCAAGGTGCTGCTGGCACTGCTGCTGGTGCTGAGGTTCCCGGGAGAGACTCTGAGAGGACAGTaGGGCTGGGCCATGGCCCTT +
Preference number: 2 (lower is better)
Translates to: GLPKVLLALLLVLRFPGETLRGQ*GWAMAL
Trigger: AAGGGCCATGGCCCAGCCCCACTGTCCTCTCAGAGT...CTCTCCCGGGAACCTCAGCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCCTGTGCGGCCAGCTGAGCCAGCATCATaGCCACATTGTGGTCAATGG +
Preference number: 2 (lower is better)
Translates to: GSTRAGKQPSPSGGPVRPAEPAS*PHCGQW
Trigger: CCATTGACCACAATGTGGCCATGATGCTGGCTCAGC...TGGCCGCACAGGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CAA 90 bp GATGCTGGCGGGGAGCCTCCCACCTGGTGCATGTGCATGCCCTTGTaGGTTGGGCTGGCTGGGGCCGACTGTGTGAGAGAGGATGTGTCA +
Preference number: 2 (lower is better)
Translates to: DAGGEPPTWCMCMPL*VGLAGADCVREDVS
Trigger: TGACACATCCTCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCCGCCAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CAA 90 bp CTAGATGCTGGCGGGGAGCCTCCCACCTGGTGCATGTGCATGCCCTaGTTGGTTGGGCTGGCTGGGGCCGACTGTGTGAGAGAGGATGTG +
Preference number: 2 (lower is better)
Translates to: LDAGGEPPTWCMCMP*LVGLAGADCVREDV
Trigger: CACATCCTCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCCGCCAGCATCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CAA 90 bp CGGCTGGAAGGCAGGTCACGGCTGACAGTCTGCTTGGCCACATCATaGGTCAGGCTGCAGCTGCTGGTGCTAGATGCTGGCGGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: RLEGRSRLTVCLATS*VRLQLLVLDAGGEP
Trigger: AGGCTCCCCGCCAGCATCTAGCACCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp AGGGAGGCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTGGATGTGGTACTCCATGGCGGTaGCCCTGGTGTACCGAGGGT +
Preference number: 2 (lower is better)
Translates to: REAGRVPTRRSGLPGGGCGTPWR*PWCTEG
Trigger: ACCCTCGGTACACCAGGGTCACCGCCATGGAGTACC...ACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGCCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR GCA 90 bp TCACGATGTGGCCCTCAGGGTGCTTCTGCAGGTAGGCCTTTACCACCCACGCTGGCTGCTGGTGCTAGATaGTGGCGGGGAGCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SRCGPQGASAGRPLPPTLAAGAR*WRGASH
Trigger: GTGGGAGGCTCCCCGCCAGCATCTAGCACCAGCAGC...CAGCGTGGGTGGTAAAGGCCTACCTGCAGAAGCACCCTGAGGGCCACATCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CAA 90 bp GACCATGCTGCACTGAGGAGGTCCTTGGTGCCTGGGTGCTGGTTCTaGATGGGAAGCCAGGCCAACCCCTCCCCTGCTCTGGACCTGTAC +
Preference number: 2 (lower is better)
Translates to: DHAALRRSLVPGCWF*MGSQANPSPALDLY
Trigger: GTACAGGTCCAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCAGCATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 90 bp TGCCTCATCTGCCCTGAACCAGACCCTCTCCTGCAGCTAGCTCACTaGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTAGCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: CLICPEPDPLLQLAH*RAPARLDLRGLAFL
Trigger: GAGGAAAGCTAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGCTAGCTGCAGGAGAGGGTCTGGTTCAGGGCAGATGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 90 bp GCAGTACCCGGGCGGCTGGAAGGCAGGTCACGGCTGACAGTCTGCTaGGCCACATCATTGGTCAGGCTGCAGCTGCTGGTGCTAGATGCT +
Preference number: 2 (lower is better)
Translates to: AVPGRLEGRSRLTVC*ATSLVRLQLLVLDA
Trigger: AGCATCTAGCACCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCCGGGTACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGAGAGGACAGTGGGGCTaGGCCATGGCCCTTAGGAGC +
Preference number: 2 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVRGQWG*AMALRS
Trigger: GCTCCTAAGGGCCATGGCCCAGCCCCACTGTCCTCT...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTGGATGTCCAGGGTTACTGGCAGTGGGGTaGCCTCTGCCATCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: AGRVPTRRSGLPGGGCPGLLAVG*PLPSGR
Trigger: CCTTCCAGATGGCAGAGGCCACCCCACTGCCAGTAA...CCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCGGTACTCCATGGCGGTaGCCCTGGTGTACCGAGGGT +
Preference number: 2 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAGTPWR*PWCTEG
Trigger: ACCCTCGGTACACCAGGGTCACCGCCATGGAGTACC...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGAACTGCAGGTAGGGCTAGGAGGAGTGGGCTGAACTGGAGCTGGCAGCCCTGCCCAGACAGTGAAAGGTaGAGGTTGACCCCACTGAGC +
Preference number: 2 (lower is better)
Translates to: GTAGRARRSGLNWSWQPCPDSER*RLTPLS
Trigger: GCTCAGTGGGGTCAACCTTCACCTTTCACTGTCTGG...GCAGGGCTGCCAGCTCCAGTTCAGCCCACTCCTCCTAGCCCTACCTGCAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR CCA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCCCGAGCAGTGCAGGCTaGCTCACTATGTACAGCAGA +
Preference number: 2 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGPSSAG*LTMYSR
Trigger: TCTGCTGTACATAGTGAGCCAGCCTGCACTGCTCGG...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCCAAGGTGGGTGGGTAGGTaGGCACTGCATCCGAGCAGT +
Preference number: 2 (lower is better)
Translates to: TQCAGLPRCSRRARLRLPRWVGR*ALHPSS
Trigger: ACTGCTCGGATGCAGTGCCCACCTACCCACCCACCT...TGGAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp CCCACCCGGTTGGGAGAATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTGAGGTCCTTGGTGCCTaGGTGCTGGTTCTTGATGGG +
Preference number: 2 (lower is better)
Translates to: PTRLGECISRGRARVSCSEVLGA*VLVLDG
Trigger: CCCATCAAGAACCAGCACCCAGGCACCAAGGACCTC...AGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp TCACGATGTGGCCCTCAGGGTGCTTCTGCAGGTAGGCCTTTACCACCCACGCTGCCCAACCCGTGTCCCTaGGCTCCTGTTGGCACTTGT +
Preference number: 2 (lower is better)
Translates to: SRCGPQGASAGRPLPPTLPNPCP*APVGTC
Trigger: ACAAGTGCCAACAGGAGCCCAGGGACACGGGTTGGG...CAGCGTGGGTGGTAAAGGCCTACCTGCAGAAGCACCCTGAGGGCCACATCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp AGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGGTCCTAGGGTGAGGCCCAGCCTGTaGGCAAGATGCAAACACTGG +
Preference number: 2 (lower is better)
Translates to: RLAHYVQQRWLRPGSGPRVRPSL*ARCKHW
Trigger: CCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCAC...CCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCATCGGACCTCAGGGATaGGGTCAGAGAGGAGGCTAT +
Preference number: 2 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGIGPQG*GQRGGY
Trigger: ATAGCCTCCTCTCTGACCCCATCCCTGAGGTCCGAT...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GCTCACTTGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTAGCTTTCCTCATACTTCCTACGGCCAGATaGGGCCAGTGTGGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: AHLRAPARLDLRGLAFLILPTAR*GQCGWK
Trigger: TTTCCACCCACACTGGCCTCATCTGGCCGTAGGAAG...TATGAGGAAAGCTAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTGGATGTCCAGGGATGTCTGAGAGCCCTTaGCACGCAGTCACCATCTCT +
Preference number: 2 (lower is better)
Translates to: AGRVPTRRSGLPGGGCPGMSESP*HAVTIS
Trigger: AGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACAT...CCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR CCA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTCCATTTCCCAGGACTaGCAGCACACTCTGAGAGGA +
Preference number: 2 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGSISQD*QHTLRG
Trigger: TCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGA...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCAGGGGTAGCTGTCAGCACCCGTaGGGATGTCCTGCACCTTCG +
Preference number: 2 (lower is better)
Translates to: TELTHTQPLKLSAELSRGSCQHP*GCPAPS
Trigger: CGAAGGTGCAGGACATCCCCACGGGTGCTGACAGCT...ACCCCTGCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CAA 90 bp GAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGAGGAGGTCCTaGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCC +
Preference number: 2 (lower is better)
Translates to: EENRAGKDHAALRRS*VPGCWFLMGSQANP
Trigger: GGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 90 bp GGGAGAATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTGCTaGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACAGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: GRMHFQGPCQGLLFC*PRTAQPVGSSHRED
Trigger: ATCTTCCCTGTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 90 bp GCTGGCTGGGGCCGACTGTGTGAGAGAGGATGTGTCAAGGATTCGTaGGGGCCGGGCGTTCACTGTGGCCTTGTAAGCAATGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: AGWGRLCERGCVKDS*GPGVHCGLVSNAVE
Trigger: CTCAACAGCATTGCTTACAAGGCCACAGTGAACGCCCGGCCCCAACGAATCCTTGACACATCCTCTCTCACACAGTCGGCCCCAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CAGGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACCACCATCAACAGAGCTaGTGCTGCCCTCCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: QGLLFCLPRTAQPVGSSHHHQQS*CCPPAS
Trigger: AGAGGCTGGAGGGCAGCATCAGCTCTGTTGATGGTG...GTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CGATCAGGTTTGCCTGGGGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTCACCATCAACAGAGCTaGTGCTGCCCTCCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: RSGLPGGGCPGLSAPSQSHHQQS*CCPPAS
Trigger: AGAGGCTGGAGGGCAGCATCAGCTCTGTTGATGGTG...AGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp AGGGAGGCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTGGATGTCGTCCCCTGAGCTCATaGGAAGGCCAGTTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: REAGRVPTRRSGLPGGGCRPLSS*EGQFLV
Trigger: AACAAGAAACTGGCCTTCTCATGAGCTCAGGGGACG...ACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGCCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp CTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCCCGAAGCTCTCGGGCTaGGCTCTGAAGCAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: LSPHTILQSRSSARSFPGPKLSG*ALKQLQ
Trigger: CTGAAGCTGCTTCAGAGCTCAGCCCGAGAGCTTCGG...GCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGGGATTTTGGCCCAGATaGAGACAAGGAGTGGCCGAA +
Preference number: 2 (lower is better)
Translates to: GLPVATLLYGPTKGLASLGFWPR*RQGVAE
Trigger: TTCGGCCACTCCTTGTCTTCATCTGGGCCAAAATCC...CAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGGGCAGGAAAGGACCATaGTGCACTGAGGAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVGRKGP*CTEEVL
Trigger: AAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCC...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp CCCCAAGGTGCTGCTGGCACTGCTGCTGGTGCTGAGGTTCCCGGGAGAGAAGGCCTCTCTTCCCCCAATTaGTCTTATCCATTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PQGAAGTAAGAEVPGREGLSSPN*SYPFPR
Trigger: CCTGGGAAATGGATAAGAGCAATTGGGGGAAGAGAG...GCCTTCTCTCCCGGGAACCTCAGCACCAGCAGCAGTGCCAGCAGCACCTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp AGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGGTCCTAGGTGTGGCCACTGTTACTaGCCTATGGGAGAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: RLAHYVQQRWLRPGSGPRCGHCY*PMGEKH
Trigger: GTGCTTCTCTCCCATAGGGCAGTAACAGTGGCCACA...CCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp CAAGGAACAGTCCTGACCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGTGGCTTAGCAGCACCTaGAGGACGATGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: QGTVLTIQVLHGGDPGVPWLSST*RTMGSC
Trigger: GCAGCTGCCCATCGTCCTGCAGGTGCTGCTAAGCCA...CGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGACTGTTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp TCGCTGAGCTGCTCCAGACAGATGGCAATCAGGTTTCCCTGGAGGCAGGCCTCTTCCCAGCAAGTCCAATaGTCTCAGCCGGTGCACCTG +
Preference number: 2 (lower is better)
Translates to: SLSCSRQMAIRFPWRQASSQQVQ*SQPVHL
Trigger: CAGGTGCACCGGCTGAGAGCATTGGACTTGCTGGGA...AGAGGCCTGCCTCCAGGGAAACCTGATTGCCATCTGTCTGGAGCAGCTCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp AACTGCTCTGCAATGCTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCACTGGGTTTGCAGGTGGGTaGGTAGGTGGGCACTGCATC +
Preference number: 2 (lower is better)
Translates to: NCSAMLGPSRAAVPKVLTGFAGG*VGGHCI
Trigger: GATGCAGTGCCCACCTACCCACCCACCTGCAAACCC...AGTGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ATGCGCACGTCCCCTGAGCTCATGAGAAGGCCAGTTTCTTGTTCCCAGTCTACCAGAGGACAGTGGGGCTaGGCCATGGCCCTTAGGAGC +
Preference number: 2 (lower is better)
Translates to: MRTSPELMRRPVSCSQSTRGQWG*AMALRS
Trigger: GCTCCTAAGGGCCATGGCCCAGCCCCACTGTCCTCT...GGTAGACTGGGAACAAGAAACTGGCCTTCTCATGAGCTCAGGGGACGTGCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp AACTGCTCTGCAATGCTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCACTGCATGTGCGTGCATGTaGCCGGCCACAGTGCCCATA +
Preference number: 2 (lower is better)
Translates to: NCSAMLGPSRAAVPKVLTACACM*PATVPI
Trigger: TATGGGCACTGTGGCCGGCCACATGCACGCACATGC...AGTGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp CAAGGAACAGTCCTGACCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGAGCTGTCAGCACCCGTaGGGATGTCCTGCACCTTCG +
Preference number: 2 (lower is better)
Translates to: QGTVLTIQVLHGGDPGVPSCQHP*GCPAPS
Trigger: CGAAGGTGCAGGACATCCCCACGGGTGCTGACAGCT...CGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGACTGTTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ACAAGGACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCCAAATGGCCACCCACTaGCGTAGCAAGGGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TRTELTHTQPLKLSAELSQMATH*RSKGCG
Trigger: CCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTG...GCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGTCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CACACGCCGCATCTTGTCGATGGTCTCGAAGGACAGGATGTACTCCTCGTTCTCCTGGGTGCTGGTTCTTaGTGGGAAGCCAGGCCAACC +
Preference number: 2 (lower is better)
Translates to: HTPHLVDGLEGQDVLLVLLGAGS*WEARPT
Trigger: GGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAG...GAGAACGAGGAGTACATCCTGTCCTTCGAGACCATCGACAAGATGCGGCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CAAGGAACAGTCCTGACCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGAAGGCAGGTCACGGCTaGCAGTCTGCTTGGCCACAT +
Preference number: 2 (lower is better)
Translates to: QGTVLTIQVLHGGDPGVPKAGHG*QSAWPH
Trigger: ATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTT...CGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGACTGTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGCCTTTACCACCCACGCTGTGTGCTCTCGGTAAGTCATGACCCGGCTAAGGAGTGTTGGAAGCATGTCTaGGAGCCCTTGCCACGCAGT +
Preference number: 2 (lower is better)
Translates to: GLYHPRCVLSVSHDPAKECWKHV*EPLPRS
Trigger: ACTGCGTGGCAAGGGCTCTCAGACATGCTTCCAACA...CTCCTTAGCCGGGTCATGACTTACCGAGAGCACACAGCGTGGGTGGTAAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR GCA 90 bp AGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGGTCCTAGGCAGTGCCCATATATGTaGAGGAGGGGAAACTATGGG +
Preference number: 2 (lower is better)
Translates to: RLAHYVQQRWLRPGSGPRQCPYM*RRGNYG
Trigger: CCCATAGTTTCCCCTCCTGCACATATATGGGCACTG...CCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ACAAGGACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCTATGTACAGCAGAGGTaGCTGCGGCCTGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: TRTELTHTQPLKLSAELSYVQQR*LRPGSG
Trigger: ACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATA...GCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CAAGGAACAGTCCTGACCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGTGTTGGAAGCATGTCTaGGAGCCCTTGCCACGCAGT +
Preference number: 2 (lower is better)
Translates to: QGTVLTIQVLHGGDPGVPCWKHV*EPLPRS
Trigger: ACTGCGTGGCAAGGGCTCTCAGACATGCTTCCAACA...CGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGACTGTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp TTCTGCCAGATCCTTCCCAGGCAAATGGCCACCCACTGGCGTAGCAAGGGGTGTTTTCCACACCCATTGTaGGCCACACCTGGAATGCTG +
Preference number: 2 (lower is better)
Translates to: FCQILPRQMATHWRSKGCFPHPL*ATPGML
Trigger: CAGCATTCCAGGTGTGGCTCACAATGGGTGTGGAAA...ACACCCCTTGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGATCTGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp CCGCATCAGACTTGTGAGGCCCAGCCTGTGGGCAAGATGCAAACACTGGTTCCAACAGAAGGAAGGATGTaGAAGCCCCTCCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PHQTCEAQPVGKMQTLVPTEGRM*KPLLSW
Trigger: CCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGT...TGGAACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp ATACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCAGGAAAGGACCATGCTaGACTGAGGAGGTCCTTGGT +
Preference number: 2 (lower is better)
Translates to: IHNVLDCLGAPGGPGSDFRKGPC*TEEVLG
Trigger: ACCAAGGACCTCCTCAGTGCAGCATGGTCCTTTCCT...GAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp AACTGCTCTGCAATGCTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCACTGGCAGGAAAGGACCATaGTGCACTGAGGAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: NCSAMLGPSRAAVPKVLTGRKGP*CTEEVL
Trigger: AAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCC...AGTGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GGTTTGCCTGGGGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGCATTAGCCACTCACGCTCCTTaGGGATCTGACTCTCTAGGT +
Preference number: 2 (lower is better)
Translates to: GLPGGGCPGLSAPSQSALATHAP*GSDSLG
Trigger: ACCTAGAGAGTCAGATCCGCAAGGAGCGTGAGTGGC...TAATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GGCAGTGGTCCTAGGTGCCGCTATCTGACACGCTTCTCCACCGAATACACGGAAGCCACTCACGCTCCTTaGGGATCTGACTCTCTAGGT +
Preference number: 2 (lower is better)
Translates to: GSGPRCRYLTRFSTEYTEATHAP*GSDSLG
Trigger: ACCTAGAGAGTCAGATCCGCAAGGAGCGTGAGTGGC...TTCCGTGTATTCGGTGGAGAAGCGTGTCAGATAGCGGCACCTAGGACCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp CAAGGAACAGTCCTGACCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGTCTCCCCAACTGCTCTaGAGGAGGGAACTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: QGTVLTIQVLHGGDPGVPSPQLL*RRELQV
Trigger: TACCTGCAGTTCCCTCCTGCAGAGCAGTTGGGGAGA...CGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGACTGTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR CCA 90 bp ACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCACGGGTTTGCAGGTGGGTaGGTAGGTGGGCACTGCATC +
Preference number: 2 (lower is better)
Translates to: TPSCRVEVLPDPSQANGHGFAGG*VGGHCI
Trigger: GATGCAGTGCCCACCTACCCACCCACCTGCAAACCC...GTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp AGGGATGGGGTCAGAGAGGAGGCTATAGAGCTTTTCGTGGGCACTGTCTCTCACGAGGTCCTTGGTGCCTaGGTGCTGGTTCTTGATGGG +
Preference number: 2 (lower is better)
Translates to: RDGVREEAIELFVGTVSHEVLGA*VLVLDG
Trigger: CCCATCAAGAACCAGCACCCAGGCACCAAGGACCTC...GTGAGAGACAGTGCCCACGAAAAGCTCTATAGCCTCCTCTCTGACCCCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp CCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCGCTTGGCCACATCATTaGTCAGGCTGCAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: PHHLAESKFCQILPRQMAAWPHH*SGCSCW
Trigger: CCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGC...GGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ACAAAGGCTGTACACTCTGAAAGGGCCTTCTGCTTAGAAACAGGGGGCTGCATGAGGAGTGGGCTGAACTaGAGCTGGCAGCCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: TKAVHSERAFCLETGGCMRSGLN*SWQPCP
Trigger: AGGGCAGGGCTGCCAGCTCCAGTTCAGCCCACTCCT...CATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 90 bp GGCCAGTTTCTTGTTCCCAGTCTACCACCATCCCAGCTCCTCGTGTaGTTGGAAGCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCT +
Preference number: 2 (lower is better)
Translates to: GQFLVPSLPPSQLLV*LEACLRALATQSPS
Trigger: AGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGCTTCCAACAACACGAGGAGCTGGGATGGTGGTAGACTGGGAACAAGAAACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CAGCCCCTTCACAATCTGCATTACATTCACAGACTCGGGCATCCGAGGGTCGAACGCTCCTTGCGGATCTaGCTCTCTAGGTCATGCTCC +
Preference number: 2 (lower is better)
Translates to: QPLHNLHYIHRLGHPRVERSLRI*LSRSCS
Trigger: GGAGCATGACCTAGAGAGTCAGATCCGCAAGGAGCG...TTCGACCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGCTATAGAGCTTTTCGTGGGCACTGTCTCTCACCCCACACCATCTTGCAGAGTGCTGAGCCTGCTTCCTaGCTCGAGTGTTCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GYRAFRGHCLSPHTILQSAEPAS*LECSSG
Trigger: TCCTGAGGAACACTCGAGTCAGGAAGCAGGCTCAGC...ACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCACGAAAAGCTCTATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp TCACGATGTGGCCCTCAGGGTGCTTCTGCAGGTAGGCCTTTACCACCCACGCTGCTGTTCAGAAAGATCTaGTCGTCCAGTCTGGTGATG +
Preference number: 2 (lower is better)
Translates to: SRCGPQGASAGRPLPPTLLFRKI*SSSLVM
Trigger: CATCACCAGACTGGACGATCAGATCTTTCTGAACAG...CAGCGTGGGTGGTAAAGGCCTACCTGCAGAAGCACCCTGAGGGCCACATCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GGTAAGTCAGGTGGCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAAAATTCTTCCAGACCCTaGTGGCACCATCATCTGTGG +
Preference number: 2 (lower is better)
Translates to: GKSGGSRAFLSPHCSMAQNSSRP*WHHHLW
Trigger: CCACAGATGATGGTGCCATCAGGGTCTGGAAGAATT...TTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGCCACCTGACTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp TCCATTTCCGTTGTAGATGGCTGTGAACTGGTTCATGGAGCCACAGGCGATCAGCCCATAGGAGCTCACTaGACGGAGTCTGGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: SISVVDGCELVHGATGDQPIGAH*TESGGA
Trigger: TGCACCCCCAGACTCCGTTCAGTGAGCTCCTATGGG...CTGATCGCCTGTGGCTCCATGAACCAGTTCACAGCCATCTACAACGGAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp TCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCAGGGACCCAGCCTCTaGCACAGATGTCCCAACCCG +
Preference number: 2 (lower is better)
Translates to: SGPVRCYSEDRRKDVQAPQGPSL*HRCPNP
Trigger: CGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTG...AGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GGAGCTCACACGCCGCATCTTGTCGATGGTCTCGAAGGACAGGATGTACTCCTCTCACGGCTGACAGTCTaGTTGGCCACATCATTGGTC +
Preference number: 2 (lower is better)
Translates to: GAHTPHLVDGLEGQDVLLSRLTV*LATSLV
Trigger: GACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGA...GAGGAGTACATCCTGTCCTTCGAGACCATCGACAAGATGCGGCGTGTGAGCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTGCAAGATGCAAACACTaGTTCCACCAGGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLARCKH*FHQGRE
Trigger: TTCCCTGCCCTGGTGGAACCAGTGTTTGCATCTTGC...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GAACGGTGCGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGTGGCACCATCATCTGTaGCTGTCAGCAGCAAGGAAC +
Preference number: 2 (lower is better)
Translates to: ERCESQDRLVTQLSAPVGWHHHL*LSAARN
Trigger: GTTCCTTGCTGCTGACAGCCACAGATGATGGTGCCA...CCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR CAA 90 bp GGCCACCCCCTCATTTCTCTCTCCTCTGTTTACCCAGTTAGGGTCTaGAAGCCTGGGTGCCATTTTGAGATGAGGAAGACCTGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: GHPLISLSSVYPVRV*KPGCHFEMRKTWSC
Trigger: GCAGGACCAGGTCTTCCTCATCTCAAAATGGCACCCAGGCTTCAAGACCCTAACTGGGTAAACAGAGGAGAGAGAAATGAGGGGGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 90 bp GGCTATAGAGCTTTTCGTGGGCACTGTCTCTCACCCCACACCATCTaGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCA +
Preference number: 2 (lower is better)
Translates to: GYRAFRGHCLSPHTI*QSRSSARSFPGKWP
Trigger: TGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCACGAAAAGCTCTATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CTGTTACTGCCCTATGGGAGAGAAGCACTTCAGAATATGCCTGATAGATGGAGGACTGGCAGCACACTCTaGGAGGACAGTGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LLLPYGREALQNMPDRWRTGSTL*EDSGAG
Trigger: CCCAGCCCCACTGTCCTCTCAGAGTGTGCTGCCAGT...CCTCCATCTATCAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CAGAACCCTGTCTGCATAGAGGCACAAATGAAGCTCTTGTGTCCGGCAGCATCAAAGGCAGGTCACGGCTaGCAGTCTGCTTGGCCACAT +
Preference number: 2 (lower is better)
Translates to: QNPVCIEAQMKLLCPAASKAGHG*QSAWPH
Trigger: ATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTT...TGATGCTGCCGGACACAAGAGCTTCATTTGTGCCTCTATGCAGACAGGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CTTTCAAAGGTCCTGTGGAGGACAGAGACAAAGGCTGTACACTCTGAAAGGGCCGCTGAGCCTGCTTCCTaGCTCGAGTGTTCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: LSKVLWRTETKAVHSERAAEPAS*LECSSG
Trigger: TCCTGAGGAACACTCGAGTCAGGAAGCAGGCTCAGC...GGCCCTTTCAGAGTGTACAGCCTTTGTCTCTGTCCTCCACAGGACCTTTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp GAAGACACTTCATGCTCACTGAGCAATCTGGACTTATTACTGGCAGTGGGGTGGCCAGGCCAGCCACAATaGGCGAACGGTGCGAATCAC +
Preference number: 2 (lower is better)
Translates to: EDTSCSLSNLDLLLAVGWPGQPQ*ANGANH
Trigger: GTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGG...CCACCCCACTGCCAGTAATAAGTCCAGATTGCTCAGTGAGCATGAAGTGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp GCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCAAATCCAGGCCAGCCACAATaGGCGAACGGTGCGAATCAC +
Preference number: 2 (lower is better)
Translates to: ACLRALATQSPSLDSFPNPGQPQ*ANGANH
Trigger: GTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGG...ATTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CAGCCCCTTCACAATCTGCATTACATTCACAGACTCGGGCATCCGAGGGTCGAAGGTGCCATTTTGAGATaGGGAAGACCTGGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: QPLHNLHYIHRLGHPRVEGAILR*GRPGPA
Trigger: GGCAGGACCAGGTCTTCCTCATCTCAAAATGGCACC...TTCGACCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR GCA 90 bp GTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGCTGGCCACGGACTGCATCCGAGCAGTaGAGGCTGGCTCACTATGTA +
Preference number: 2 (lower is better)
Translates to: VIVKTEGRMCKPLLSWPRTASEQ*RLAHYV
Trigger: TACATAGTGAGCCAGCCTGCACTGCTCGGATGCAGT...CCGTGGCCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GGTAAGTCAGGTGGCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACTACAGGGCGCTGTCTaGTCTGTAACTAATGCTTTG +
Preference number: 2 (lower is better)
Translates to: GKSGGSRAFLSPHCSMAQLQGAV*SVTNAL
Trigger: CAAAGCATTAGTTACAGAGCAGACAGCGCCCTGTAG...TTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGCCACCTGACTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp ACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCAGGGGTATGGGCCTGCATGAATaGACACCTAAGTGTACATGG +
Preference number: 2 (lower is better)
Translates to: TELTHTQPLKLSAELSRGMGLHE*TPKCTW
Trigger: CCATGTACACTTAGGTGTGCATTCATGCAGGCCCAT...ACCCCTGCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGGGATCAGCAGCCAGATaGAGTAAGACTCTCCAAATT +
Preference number: 2 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVGSAAR*SKTLQI
Trigger: AATTTGGAGAGTCTTACTGCATCTGGCTGCTGATCC...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp TCACGATGTGGCCCTCAGGGTGCTTCTGCAGGTAGGCCTTTACCACCCACGCTGGGCGACAGCTATGCATaGTGTAAAGGGATGGAATTT +
Preference number: 2 (lower is better)
Translates to: SRCGPQGASAGRPLPPTLGDSYA*CKGMEF
Trigger: AAATTCCATCCCTTTACACCATGCATAGCTGTCGCC...CAGCGTGGGTGGTAAAGGCCTACCTGCAGAAGCACCCTGAGGGCCACATCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCAAATCTAAGGAGGAAGGTGTaGTCAGGACTGGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: ACLRALATQSPSLDSFPNLRRKV*SGLAQP
Trigger: GGGCTGGGCCAGTCCTGACCACACCTTCCTCCTTAG...ATTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp CTGAGCAATCTGGACTTATTACTGGCAGTGGGGTGGCCTCTGCCATCTGGAAGGAATTCTTCCAGACCCTaGTGGCACCATCATCTGTGG +
Preference number: 2 (lower is better)
Translates to: LSNLDLLLAVGWPLPSGRNSSRP*WHHHLW
Trigger: CCACAGATGATGGTGCCATCAGGGTCTGGAAGAATT...CCTTCCAGATGGCAGAGGCCACCCCACTGCCAGTAATAAGTCCAGATTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp GCTGTCAGCCCCTTCACAATCTGCATTACATTCACAGACTCGGGCATCCGAGGGCATCTGGAAGGAGCTTaGATAGTGCTAAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: AVSPFTICITFTDSGIRGHLEGA*IVLRRG
Trigger: CCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATG...CCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp CCCCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGGATAGGAAGTACTTGTaGCCGTTGTCCTTCACGAGG +
Preference number: 2 (lower is better)
Translates to: PHTILQSRSSARSFPGKWDRKYL*PLSFTR
Trigger: CCTCGTGAAGGACAACGGTCACAAGTACTTCCTATC...CCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp CTCTTGGCTAAAACAGGTCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACCTACAGGGCGCTGTCTaGTCTGTAACTAATGCTTTG +
Preference number: 2 (lower is better)
Translates to: LLAKTGPLNTAQGPSLCHLQGAV*SVTNAL
Trigger: CAAAGCATTAGTTACAGAGCAGACAGCGCCCTGTAG...GTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGTTTTAGCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCAAGCACTTCAGAATATaGCTGATAGATGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAKHFRI*LIDGGS
Trigger: GCTGCCTCCATCTATCAGGCATATTCTGAAGTGCTT...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GTGGGGTGGCCTCTGCCATCTGGAAGGAGCTTGAATAGTGCTAAGGAGAGGGGATGGTGTACCGAGGGTTaGCATTGTGGAAATAGTCCA +
Preference number: 2 (lower is better)
Translates to: VGWPLPSGRSLNSAKERGWCTEG*HCGNSP
Trigger: TGGACTATTTCCACAATGGCAACCCTCGGTACACCA...TCCCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR CCA 90 bp ATCAGGGCCTTTGTCAAACATCTTTCGTGTTCGAGGGAACTGGTGGGAGTGAGGCCGAGCAGTGCAGGCTaGCTCACTATGTACAGCAGA +
Preference number: 2 (lower is better)
Translates to: IRAFVKHLSCSRELVGVRPSSAG*LTMYSR
Trigger: TCTGCTGTACATAGTGAGCCAGCCTGCACTGCTCGG...CCTCACTCCCACCAGTTCCCTCGAACACGAAAGATGTTTGACAAAGGCCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGCTGGCCACGGACACCTAAGTGTACATaGGCAGGAAGACCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: VIVKTEGRMCKPLLSWPRTPKCT*AGRPGH
Trigger: ATGCCCTGGTCTTCCTGCCCATGTACACTTAGGTGT...CCGTGGCCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ACTCCAGTCACAGAACCCTGTCTGCATAGAGGCACAAATGAAGCTCTTGTGTCCGCTTGGCCACATCATTaGTCAGGCTGCAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: TPVTEPCLHRGTNEALVSAWPHH*SGCSCW
Trigger: CCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGC...GGACACAAGAGCTTCATTTGTGCCTCTATGCAGACAGGGTTCTGTGACTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GGAGCTCACACGCCGCATCTTGTCGATGGTCTCGAAGGACAGGATGTACTCCTCCATCTGCATCATCTGTaGTCTGATCAGGGCCTTTGT +
Preference number: 2 (lower is better)
Translates to: GAHTPHLVDGLEGQDVLLHLHHL*SDQGLC
Trigger: ACAAAGGCCCTGATCAGACCACAGATGATGCAGATG...GAGGAGTACATCCTGTCCTTCGAGACCATCGACAAGATGCGGCGTGTGAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp ATCAGGGCCTTTGTCAAACATCTTTCGTGTTCGAGGGAACTGGTGGGAGTGAGGTCACGGCTGACAGTCTaGTTGGCCACATCATTGGTC +
Preference number: 2 (lower is better)
Translates to: IRAFVKHLSCSRELVGVRSRLTV*LATSLV
Trigger: GACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGA...CCTCACTCCCACCAGTTCCCTCGAACACGAAAGATGTTTGACAAAGGCCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp TCCCTTTGTAAAACCTCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGAATGCTCTCAGCCGGTaGACCTGGCTTAGCAGCACC +
Preference number: 2 (lower is better)
Translates to: SLCKTSEENRAGKDHAALNALSR*TWLSST
Trigger: GGTGCTGCTAAGCCAGGTGCACCGGCTGAGAGCATT...CAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGAGGTTTTACAAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTACTGTTACTGCCCTATaGGAGAGAAGCACTTCAGAA +
Preference number: 2 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLTVTAL*ERSTSE
Trigger: TTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAGT...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 90 bp GACTTATTACTGGCAGTGGGGTGGCCTCTGCCATCTGGAAGGAGCTaGAATAGTGCTAAGGAGAGGGGAGATGTGACAGTTACCATTCAC +
Preference number: 2 (lower is better)
Translates to: DLLLAVGWPLPSGRS*NSAKERGDVTVTIH
Trigger: GTGAATGGTAACTGTCACATCTCCCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCCCACTGCCAGTAATAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 90 bp CAAGGGCAGCGACATCTCACGGCTTTATTCTTTATTAACACTCTGTaGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: QGQRHLTALFFINTL*LSLLWTPLQFRVLS
Trigger: TGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAGAGTGTTAATAAAGAATAAAGCCGTGAGATGTCGCTGCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp TGTCTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCACTGTTCAGAAAGATCTaGTCGTCCAGTCTGGTGATG +
Preference number: 2 (lower is better)
Translates to: CLSPHTILQSRSSARSFPLFRKI*SSSLVM
Trigger: CATCACCAGACTGGACGATCAGATCTTTCTGAACAG...TGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp TCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCGTCCCCTGAGCTCATaGGAAGGCCAGTTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: SGPVRCYSEDRRKDVQAPRPLSS*EGQFLV
Trigger: AACAAGAAACTGGCCTTCTCATGAGCTCAGGGGACG...AGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp ACAAAGGCTGTACACTCTGAAAGGGCCTTCTGCTTAGAAACAGGGGGCTGCATGCACTGTTTCTGTCTGTaGGGTCAACTTGAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: TKAVHSERAFCLETGGCMHCFCL*GQLEAA
Trigger: GGCTGCTTCAAGTTGACCCCACAGACAGAAACAGTG...CATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR TCA 90 bp AACTGCTCTGCAATGCTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCACTCTTTGCTTAGCTTCATaGTTGAATTTCCGCATCAGA +
Preference number: 2 (lower is better)
Translates to: NCSAMLGPSRAAVPKVLTLCLAS*LNFRIR
Trigger: TCTGATGCGGAAATTCAATCATGAAGCTAAGCAAAG...AGTGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp CCGCATCAGACTTGTGAGGCCCAGCCTGTGGGCAAGATGCAAACACTGGTTCCATGTAAGCAATGCTGTTaGGGACTTTCATGGCTAAAT +
Preference number: 2 (lower is better)
Translates to: PHQTCEAQPVGKMQTLVPCKQCC*GLSWLN
Trigger: ATTTAGCCATGAAAGTCCTCAACAGCATTGCTTACA...TGGAACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp CTGTTACTGCCCTATGGGAGAGAAGCACTTCAGAATATGCCTGATAGATGGAGGACTGCATCCGAGCAGTaGAGGCTGGCTCACTATGTA +
Preference number: 2 (lower is better)
Translates to: LLLPYGREALQNMPDRWRTASEQ*RLAHYV
Trigger: TACATAGTGAGCCAGCCTGCACTGCTCGGATGCAGT...CCTCCATCTATCAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATGGCCAACCCCTCCCCTaGTCTGGACCTGTACGCTGT +
Preference number: 2 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNGQPLP*SGPVRC
Trigger: ACAGCGTACAGGTCCAGAGCAGGGGAGGGGTTGGCC...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp ACAAAGGCTGTACACTCTGAAAGGGCCTTCTGCTTAGAAACAGGGGGCTGCATGTTACCATTCACTGAGTaGCATCCTCCTGTCGTAGAC +
Preference number: 2 (lower is better)
Translates to: TKAVHSERAFCLETGGCMLPFTE*HPPVVD
Trigger: GTCTACGACAGGAGGATGGCACTCAGTGAATGGTAA...CATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR CCA 90 bp AACGGTGCGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGACATGGTGTAAAGGGATaGAATTTGACCACAGAAGGA +
Preference number: 2 (lower is better)
Translates to: NGANHKTDLSHSCQHPWGHGVKG*NLTTEG
Trigger: TCCTTCTGTGGTCAAATTCCATCCCTTTACACCATG...TCCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp TTGACGATTACAGCAAGAATGAAGGCTGTCATGGTCCTATGTTCAGCTGGCATGTTCACGAGGTCAGCTTaGCACGACTGCAGGACGATG +
Preference number: 2 (lower is better)
Translates to: LTITARMKAVMVLCSAGMFTRSA*HDCRTM
Trigger: CATCGTCCTGCAGTCGTGCCAAGCTGACCTCGTGAA...CATGCCAGCTGAACATAGGACCATGACAGCCTTCATTCTTGCTGTAATCGTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139728.8
3UTR-3UTR TCA 90 bp CAGTTACACCCTCTAAACTGTTCTTTCAAAGGTCCTGTGGAGGACAGAGACAAAGCCTGGGTGCCATTTTaGGATGAGGAAGACCTGGTC +
Preference number: 2 (lower is better)
Translates to: QLHPLNCSFKGPVEDRDKAWVPF*DEEDLV
Trigger: GACCAGGTCTTCCTCATCTCAAAATGGCACCCAGGC...TTTGTCTCTGTCCTCCACAGGACCTTTGAAAGAACAGTTTAGAGGGTGTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR GCA 90 bp TCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCTCTCTTCCCCCAATTaGTCTTATCCATTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: SGPVRCYSEDRRKDVQAPLSSPN*SYPFPR
Trigger: CCTGGGAAATGGATAAGAGCAATTGGGGGAAGAGAG...AGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp GCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCAAATCGATTACAGCAAGAATaGAGGCTGTCATGGTCCTAT +
Preference number: 2 (lower is better)
Translates to: ACLRALATQSPSLDSFPNRLQQE*RLSWSY
Trigger: ATAGGACCATGACAGCCTTCATTCTTGCTGTAATCG...ATTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATCATCCAGGGCTGCAGTaGCTAAGGTCCTCACTTGCC +
Preference number: 2 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNHPGLQ*LRSSLA
Trigger: GGCAAGTGAGGACCTTAGGCACTGCAGCCCTGGATG...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GGCGCTGTCTGCTCTGTAACTAATGCTTTGATCACATGGAAAAATCAAATGTGTGTCTCCTGTTCTGCTTaGCCAGGACAGCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GAVCSVTNALITWKNQMCVSCSA*PGQLSL
Trigger: CAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGAC...ACACATTTGATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATTATGTACAGCAGAGGTaGCTGCGGCCTGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNYVQQR*LRPGSG
Trigger: ACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATA...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR TCA 90 bp TCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCTTTGCTTAGCTTCATaGTTGAATTTCCGCATCAGA +
Preference number: 2 (lower is better)
Translates to: SGPVRCYSEDRRKDVQAPLCLAS*LNFRIR
Trigger: TCTGATGCGGAAATTCAATCATGAAGCTAAGCAAAG...AGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATGTCCTCACTTGCCTGTaGACACAGACACATGTCGGA +
Preference number: 2 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNVLTCL*TQTHVG
Trigger: TCCGACATGTGTCTGTGTGCACAGGCAAGTGAGGAC...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 90 bp AAAATAAATAGAGAAATGCGCTCTAGGTCAGCGCTCTCTCGAGCTTaGCTTAGCTTCATGATTGAATTTCCGCATCAGACTTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: KINREMRSRSALSRA*LSFMIEFPHQTCEA
Trigger: GGCCTCACAAGTCTGATGCGGAAATTCAATCATGAAGCTAAGCAAAGCTCGAGAGAGCGCTGACCTAGAGCGCATTTCTCTATTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 90 bp AGCACGGCTATTCTACAGGGCGCTGTCTGCTCTGTAACTAATGCTTaGATCACATGGAAAAATCAAATGTGTCCCTTTGTAAAACCTCAG +
Preference number: 2 (lower is better)
Translates to: STAILQGAVCSVTNA*ITWKNQMCPFVKPQ
Trigger: CTGAGGTTTTACAAAGGGACACATTTGATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCCCTGTAGAATAGCCGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR GCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATATGGGCCTGCATGAATaGACACCTAAGTGTACATGG +
Preference number: 2 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNMGLHE*TPKCTW
Trigger: CCATGTACACTTAGGTGTGCATTCATGCAGGCCCAT...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp GGCTCCCCAAGGTGCTGCTGGCACTGCTGCTGGTGCTaGGGTTCCCGGGAGAGAAGGCCACTGAGCTGCCCG +
Preference number: 3 (lower is better)
Translates to: GSPRCCWHCCWC*GSRERRPLSCP
Trigger: CGGGCAGCTCAGTGGCCTTCTCTCCCGGGAACCTCAGCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp CCTCAGCTGGCCACGGCCAAGTCAGGAGCCGGGGTTTaGAGGTGGGTGGGTAGGTGGGCACTGCATCCGAGC +
Preference number: 3 (lower is better)
Translates to: PQLATAKSGAGV*RWVGRWALHPS
Trigger: GCTCGGATGCAGTGCCCACCTACCCACCCACCTGCAAACCCCGGCTCCTGACTTGGCCGTGGCCAGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp TGTTCGAGGGAACTGGTGGGAGTGAGGGGTGTACTGTaGCCCTGTGGGGCCGGCAGTACCCGGGCGGCTGGA +
Preference number: 3 (lower is better)
Translates to: CSRELVGVRGVL*PCGAGSTRAAG
Trigger: TCCAGCCGCCCGGGTACTGCCGGCCCCACAGGGGCACAGTACACCCCTCACTCCCACCAGTTCCCTCGAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR GCA 72 bp ATGCTGGCGGGGAGCCTCCCACCTGGTGCATGTGCATaGCCTTGTTGGTTGGGCTGGCTGGGGCCGACTGTG +
Preference number: 3 (lower is better)
Translates to: MLAGSLPPGACA*PCWLGWLGPTV
Trigger: CACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCCGCCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp CTAGATGCTGGCGGGGAGCCTCCCACCTGGTGCATGTaGATGCCCTTGTTGGTTGGGCTGGCTGGGGCCGAC +
Preference number: 3 (lower is better)
Translates to: LDAGGEPPTWCM*MPLLVGLAGAD
Trigger: GTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCCGCCAGCATCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 72 bp CCACGGCCAAGTCAGGAGCCGGGGTTTGCAGGTGGGTaGGTAGGTGGGCACTGCATCCGAGCAGTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: PRPSQEPGFAGG*VGGHCIRAVQA
Trigger: AGCCTGCACTGCTCGGATGCAGTGCCCACCTACCCACCCACCTGCAAACCCCGGCTCCTGACTTGGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp CGGCAGTACCCGGGCGGCTGGAAGGCAGGTCACGGCTaGCAGTCTGCTTGGCCACATCATTGGTCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: RQYPGGWKAGHG*QSAWPHHWSGC
Trigger: GCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCCGGGTACTGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR GCA 72 bp CCCGGGCGGCTGGAAGGCAGGTCACGGCTGACAGTCTaGTTGGCCACATCATTGGTCAGGCTGCAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: PGRLEGRSRLTV*LATSLVRLQLL
Trigger: CAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR GCA 72 bp CTGGTGCTAGATGCTGGCGGGGAGCCTCCCACCTGGTaGATGTGCATGCCCTTGTTGGTTGGGCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: LVLDAGGEPPTW*MCMPLLVGLAG
Trigger: CCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCCGCCAGCATCTAGCACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 72 bp GGAACTGCAGGTAGGGCTAGGAGGAGTGGGCTGAACTaGAGCTGGCAGCCCTGCCCTTGGGCGGAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: GTAGRARRSGLN*SWQPCPWAEPQ
Trigger: TTGAGGCTCCGCCCAAGGGCAGGGCTGCCAGCTCCAGTTCAGCCCACTCCTCCTAGCCCTACCTGCAGTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 72 bp GGGCTGGCTTCCTTGAGCCCCACCCGGTTGGGAGAATaGATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCT +
Preference number: 3 (lower is better)
Translates to: GLASLSPTRLGE*ISRGRARVSCS
Trigger: AGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGGGCTCAAGGAAGCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp GGACTGGCCCAGCCCAGTTCCTCTCCCCAACTGCTCTaGAGGAGGGAACTGCAGGTAGGGCTAGGAGGAGTG +
Preference number: 3 (lower is better)
Translates to: GLAQPSSSPQLL*RRELQVGLGGV
Trigger: CACTCCTCCTAGCCCTACCTGCAGTTCCCTCCTGCAGAGCAGTTGGGGAGAGGAACTGGGCTGGGCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CCA 72 bp AAGTCAGGAGCCGGGGTTTGCAGGTGGGTGGGTAGGTaGGCACTGCATCCGAGCAGTGCAGGCTGGCTCACT +
Preference number: 3 (lower is better)
Translates to: KSGAGVCRWVGR*ALHPSSAGWLT
Trigger: AGTGAGCCAGCCTGCACTGCTCGGATGCAGTGCCCACCTACCCACCCACCTGCAAACCCCGGCTCCTGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 72 bp CAGGACTGGCAGCACACTCTGAGAGGACAGTGGGGCTaGGCCATGGCCCTTAGGAGCCCCAGCACGGCTATT +
Preference number: 3 (lower is better)
Translates to: QDWQHTLRGQWG*AMALRSPSTAI
Trigger: AATAGCCGTGCTGGGGCTCCTAAGGGCCATGGCCCAGCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp CGGATCGAGCCATCACCCAGGCCAGCCACAATGAGCGAACGGTGCGAATCACAACTGGCAGCCCTGCCCTaGGGCGGAGCCTCAAGAGGA +
Preference number: 3 (lower is better)
Translates to: RIEPSPRPATMSERCESQLAALP*GGASRG
Trigger: TCCTCTTGAGGCTCCGCCCAAGGGCAGGGCTGCCAG...TTGTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGGGTGATGGCTCGATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 72 bp TGCCCTTGTTGGTTGGGCTGGCTGGGGCCGACTGTGTaGGAGAGGATGTGTCAAGGATTCGTTGGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: CPCWLGWLGPTV*ERMCQGFVGAG
Trigger: CCCGGCCCCAACGAATCCTTGACACATCCTCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp GAGCCGGGGTTTGCAGGTGGGTGGGTAGGTGGGCACTaGATCCGAGCAGTGCAGGCTGGCTCACTATGTACA +
Preference number: 3 (lower is better)
Translates to: EPGFAGGWVGGH*IRAVQAGSLCT
Trigger: TGTACATAGTGAGCCAGCCTGCACTGCTCGGATGCAGTGCCCACCTACCCACCCACCTGCAAACCCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp ACAGGTCCACTGAACACAGCACAGGGACCCAGCCTCTaGCACAGATGTCCCAACCCGTGTCCCTGGGCTCCT +
Preference number: 3 (lower is better)
Translates to: TGPLNTAQGPSL*HRCPNPCPWAP
Trigger: AGGAGCCCAGGGACACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 72 bp TTCTGCCAGATCCTTCCCAGGCAAATGGCCACCCACTaGCGTAGCAAGGGGTGTGGGTCGCTGAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: FCQILPRQMATH*RSKGCGSLSCS
Trigger: GGAGCAGCTCAGCGACCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGATCTGGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR CCA 72 bp GAGCAGTGCAGGCTGGCTCACTATGTACAGCAGAGGTaGCTGCGGCCTGGCAGTGGTCCTAGGTGCCGCTAT +
Preference number: 3 (lower is better)
Translates to: EQCRLAHYVQQR*LRPGSGPRCRY
Trigger: ATAGCGGCACCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCTGCACTGCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 72 bp TGGCCACCCACTGGCGTAGCAAGGGGTGTGGGTCGCTaGGCTGCTCCAGACAGATGGCAATCAGGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: WPPTGVARGVGR*AAPDRWQSGFP
Trigger: AGGGAAACCTGATTGCCATCTGTCTGGAGCAGCTCAGCGACCCACACCCCTTGCTACGCCAGTGGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR GCA 72 bp CGCATCAGACTTGTGAGGCCCAGCCTGTGGGCAAGATaGAAACACTGGTTCCACCAGGGCAGGGAAGCAGCC +
Preference number: 3 (lower is better)
Translates to: RIRLVRPSLWAR*KHWFHQGREAA
Trigger: GGCTGCTTCCCTGCCCTGGTGGAACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp CACTCTGAAAGGGCCTTCTGCTTAGAAACAGGGGGCTaGATGGAGGGAGGCAGGCAGGGTACCTACCAGGCG +
Preference number: 3 (lower is better)
Translates to: HSERAFCLETGG*MEGGRQGTYQA
Trigger: CGCCTGGTAGGTACCCTGCCTGCCTCCCTCCATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CCA 72 bp AAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGCTaGCCACGGCCAAGTCAGGAGCCGGGGTTTGCAGGT +
Preference number: 3 (lower is better)
Translates to: KTEGRMCKPLLS*PRPSQEPGFAG
Trigger: ACCTGCAAACCCCGGCTCCTGACTTGGCCGTGGCCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 72 bp CAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTaGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGC +
Preference number: 3 (lower is better)
Translates to: QGTYQAIRFAWG*MSRAVSPFTIC
Trigger: GCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CCA 72 bp CAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATaGCCACCCACTGGCGTAGCAAGGGGTGTGGGTCGC +
Preference number: 3 (lower is better)
Translates to: QSRSSARSFPGK*PPTGVARGVGR
Trigger: GCGACCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR CCA 72 bp GTAGTCATTGCTTCCTACGGCCAGATGAGGCCAGTGTaGGTGGAAAGCCAGGCAGCTGATGGCCCCGACTCG +
Preference number: 3 (lower is better)
Translates to: VVIASYGQMRPV*VESQAADGPDS
Trigger: CGAGTCGGGGCCATCAGCTGCCTGGCTTTCCACCCACACTGGCCTCATCTGGCCGTAGGAAGCAATGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp AACTGCTCTGCAATGCTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCACTGCACTGAGGAGGTCCTaGGTGCCTGGGTGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: NCSAMLGPSRAAVPKVLTALRRS*VPGCWF
Trigger: GAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGC...AGTGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp GGCACGAACTGTCGACAGCGAGGATTTTGGCCCAGATaGAGACAAGGAGTGGCCGAAGCTCTCGGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: GTNCRQRGFWPR*RQGVAEALGLS
Trigger: GCTCAGCCCGAGAGCTTCGGCCACTCCTTGTCTTCATCTGGGCCAAAATCCTCGCTGTCGACAGTTCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 72 bp GCTGCTGGTGCTGAGGTTCCCGGGAGAGAAGGCCACTaGGCTGCCCGATTCTTCCGTCAAGCTCAGATTCTG +
Preference number: 3 (lower is better)
Translates to: AAGAEVPGREGH*AARFFRQAQIL
Trigger: CAGAATCTGAGCTTGACGGAAGAATCGGGCAGCTCAGTGGCCTTCTCTCCCGGGAACCTCAGCACCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp TCCAGGGCTGCAGTGCCTAAGGTCCTCACTTGCCTGTaGACACAGACACATGTCGGACACACGGGGACAGTG +
Preference number: 3 (lower is better)
Translates to: SRAAVPKVLTCL*TQTHVGHTGTV
Trigger: CACTGTCCCCGTGTGTCCGACATGTGTCTGTGTGCACAGGCAAGTGAGGACCTTAGGCACTGCAGCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp ATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTaGTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCT +
Preference number: 3 (lower is better)
Translates to: MHFQGPCQGLLF*LPRTAQPVGSS
Trigger: AGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp CTCGAGTGTTCCTCAGGAACCGCCACTCACGCTCCTTaGGGATCTGACTCTCTAGGTCATGCTCCTCGGGGA +
Preference number: 3 (lower is better)
Translates to: LECSSGTATHAP*GSDSLGHAPRG
Trigger: TCCCCGAGGAGCATGACCTAGAGAGTCAGATCCGCAAGGAGCGTGAGTGGCGGTTCCTGAGGAACACTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 72 bp CTTGTCACACAGCTGTCAGCACCCGTGGGGATGTCCTaGACCTTCGTCTCCCGGTCAGTATCCCAGATCCTG +
Preference number: 3 (lower is better)
Translates to: LVTQLSAPVGMS*TFVSRSVSQIL
Trigger: CAGGATCTGGGATACTGACCGGGAGACGAAGGTGCAGGACATCCCCACGGGTGCTGACAGCTGTGTGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 72 bp TGTTCCCATAGGAGCTCACTGAACGGAGTCTGGGGGTaGATGGGCTGTCTCGAACTGGGGTCAAGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: CSHRSSLNGVWG*MGCLELGSSSL
Trigger: GAGGGAGCTTGACCCCAGTTCGAGACAGCCCATGCACCCCCAGACTCCGTTCAGTGAGCTCCTATGGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 72 bp AAAGGACCATGCTGCACTGAGGAGGTCCTTGGTGCCTaGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCC +
Preference number: 3 (lower is better)
Translates to: KGPCCTEEVLGA*VLVLDGKPGQP
Trigger: GGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCAGCATGGTCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 72 bp TTCATGGAGCCACAGGCGATCAGGTTTGCCTGGGGGTaGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGC +
Preference number: 3 (lower is better)
Translates to: FMEPQAIRFAWG*MSRAVSPFTIC
Trigger: GCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGTGGCTCCATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp AGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCACCCACTGGCGTAGCATGCTTGGCCACATCATaGGTCAGGCTGCAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SRSSARSFPGKWPPTGVACLATS*VRLQLL
Trigger: CAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCA...TGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp AGATCCTTCCCAGGCAAATGGCCACCCACTGGCGTAGCAAGGGGTGTGGGTCGCAAACAGATGCTGTCCTaGTCGGCGACAGCTATGCAT +
Preference number: 3 (lower is better)
Translates to: RSFPGKWPPTGVARGVGRKQMLS*SATAMH
Trigger: ATGCATAGCTGTCGCCGACAAGGACAGCATCTGTTT...GCGACCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp CGTGGGCACTGTCTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTGCCAGACTTCACGAGGTCAGCTaGGCACGAACTGTCGACAGC +
Preference number: 3 (lower is better)
Translates to: RGHCLSPHTILQSRSSARLHEVS*ARTVDS
Trigger: GCTGTCGACAGTTCGTGCCAAGCTGACCTCGTGAAG...TCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR TCA 72 bp GTGCGGCCAAAACTGAGTCACCAGTTGGACAAGGACTaGGCTGACGCACACTCAGCCCCTGAAGCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: VRPKLSHQLDKD*ADAHSAPEALC
Trigger: GCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGTCCTTGTCCAACTGGTGACTCAGTTTTGGCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp GGCTGCGGCCTGGCAGTGGTCCTAGGTGCCGCTATCTaGCACGCTTCTCCACCGAATACACGGAAATGTAGT +
Preference number: 3 (lower is better)
Translates to: GCGLAVVLGAAI*HASPPNTRKCS
Trigger: ACTACATTTCCGTGTATTCGGTGGAGAAGCGTGTCAGATAGCGGCACCTAGGACCACTGCCAGGCCGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp GGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTaGATTACATTCACAGACTCGGGCATCCGAGGGTCG +
Preference number: 3 (lower is better)
Translates to: GWMSRAVSPFTI*ITFTDSGIRGS
Trigger: CGACCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR CCA 72 bp CTCTTCCCCCAATTGCTCTTATCCATTTCCCAGGACTaGCAGCACACTCTGAGAGGACAGTGGGGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: LFPQLLLSISQD*QHTLRGQWGWA
Trigger: GGCCCAGCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGATAAGAGCAATTGGGGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp AGGGATGGGGTCAGAGAGGAGGCTATAGAGCTTTTCGTGGGCACTGTCTCTCACCGGCTGACAGTCTGCTaGGCCACATCATTGGTCAGG +
Preference number: 3 (lower is better)
Translates to: RDGVREEAIELFVGTVSHRLTVC*ATSLVR
Trigger: CCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCG...GTGAGAGACAGTGCCCACGAAAAGCTCTATAGCCTCCTCTCTGACCCCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp GTCCTGACCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGAGGGTTGCCGTAAAGGGATGGAATTaGACCACAGAAGGAACGCCG +
Preference number: 3 (lower is better)
Translates to: VLTIQVLHGGDPGVPRVAVKGWN*TTEGTP
Trigger: CGGCGTTCCTTCTGTGGTCAAATTCCATCCCTTTAC...GGCAACCCTCGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp CCCCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCTGGAGGCAGGCCTCTaGCCCTGTTGTGTAGCTGTT +
Preference number: 3 (lower is better)
Translates to: PHTILQSRSSARSFPGKWLEAGL*PCCVAV
Trigger: AACAGCTACACAACAGGGCAAGAGGCCTGCCTCCAG...CCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR TCA 72 bp AGGCAGCCGCTAACTACAGATCTGCCTCATCTGCCCTaGACCAGACCCTCTCCTGCAGCTAGCTCACTTGAG +
Preference number: 3 (lower is better)
Translates to: RQPLTTDLPHLP*TRPSPAASSLE
Trigger: CTCAAGTGAGCTAGCTGCAGGAGAGGGTCTGGTTCAGGGCAGATGAGGCAGATCTGTAGTTAGCGGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp TCTGACTCTCTAGGTCATGCTCCTCGGGGATCTTCATaGCTGGCTGGGCAAAGTAGCGGGCACTCCAGTCAC +
Preference number: 3 (lower is better)
Translates to: SDSLGHAPRGSS*LAGQSSGHSSH
Trigger: GTGACTGGAGTGCCCGCTACTTTGCCCAGCCAGTCATGAAGATCCCCGAGGAGCATGACCTAGAGAGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR TCA 72 bp TTCCTCAGGAACCGCCACTCACGCTCCTTGCGGATCTaGCTCTCTAGGTCATGCTCCTCGGGGATCTTCATG +
Preference number: 3 (lower is better)
Translates to: FLRNRHSRSLRI*LSRSCSSGIFM
Trigger: CATGAAGATCCCCGAGGAGCATGACCTAGAGAGTCAGATCCGCAAGGAGCGTGAGTGGCGGTTCCTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp TCTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTaGCAGATCCTTCCCAGGCAAATGGCCACCCACTGG +
Preference number: 3 (lower is better)
Translates to: SLTPHHLAESKF*QILPRQMATHW
Trigger: CCAGTGGGTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR GCA 72 bp GTGCTCTCGGTAAGTCATGACCCGGCATTCACTGAGTaGCATCCTCCTGTCGTAGACACGGATCGAGCCATC +
Preference number: 3 (lower is better)
Translates to: VLSVSHDPAFTE*HPPVVDTDRAI
Trigger: GATGGCTCGATCCGTGTCTACGACAGGAGGATGGCACTCAGTGAATGCCGGGTCATGACTTACCGAGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 72 bp AGCTTTCCTCATAGCACCATGACATACACAATGTGCTaGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: SFPHSTMTYTMC*TASVLQEGQAQ
Trigger: CTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGTATGTCATGGTGCTATGAGGAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 72 bp CACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTaGGGATGTCCTGCACCTTCGTCTCCCGGTCAGTAT +
Preference number: 3 (lower is better)
Translates to: HKTDLSHSCQHP*GCPAPSSPGQY
Trigger: ATACTGACCGGGAGACGAAGGTGCAGGACATCCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR CCA 72 bp CCAGGGCAAATACAGCTGCACATCGGACCTCAGGGATaGGGTCAGAGAGGAGGCTATAGAGCTTTTCGTGGG +
Preference number: 3 (lower is better)
Translates to: PGQIQLHIGPQG*GQRGGYRAFRG
Trigger: CCCACGAAAAGCTCTATAGCCTCCTCTCTGACCCCATCCCTGAGGTCCGATGTGCAGCTGTATTTGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 72 bp GCGCTGAGTAGGAGCTCACACGCCGCATCTTGTCGATaGTCTCGAAGGACAGGATGTACTCCTCGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: ALSRSSHAASCR*SRRTGCTPRSQ
Trigger: CTGAGAACGAGGAGTACATCCTGTCCTTCGAGACCATCGACAAGATGCGGCGTGTGAGCTCCTACTCAGCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp AGCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCAAAGCACTGAGGAGGTCCTaGGTGCCTGGGTGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: SMSESPCHAVTISGFFSKALRRS*VPGCWF
Trigger: GAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGC...TTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp GGCCTTTACCACCCACGCTGTGTGCTCTCGGTAAGTCATGACCCGGCTAAGGAGAAACAGATGCTGTCCTaGTCGGCGACAGCTATGCAT +
Preference number: 3 (lower is better)
Translates to: GLYHPRCVLSVSHDPAKEKQMLS*SATAMH
Trigger: ATGCATAGCTGTCGCCGACAAGGACAGCATCTGTTT...CTCCTTAGCCGGGTCATGACTTACCGAGAGCACACAGCGTGGGTGGTAAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 72 bp GGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTaGCCTATGGGAGAGAAGCACTTCAGAATATGCCTG +
Preference number: 3 (lower is better)
Translates to: GTSRRQACGHCY*PMGEKHFRICL
Trigger: CAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp TGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATaGTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCC +
Preference number: 3 (lower is better)
Translates to: CVVSCLCATALQ*WVHPGLQCLRS
Trigger: GGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTTGCACACAAACAGGACACAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp GAGCCATCACCCAGGCCAGCCACAATGAGCGAACGGTaGGAATCACAAGACAGACTTGTCACACAGCTGTCA +
Preference number: 3 (lower is better)
Translates to: EPSPRPATMSER*ESQDRLVTQLS
Trigger: TGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGGGTGATGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 72 bp ACAGAGACAAAGGCTGTACACTCTGAAAGGGCCTTCTaGTTAGAAACAGGGGGCTGCATGGAGGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: TETKAVHSERAF*LETGGCMEGGR
Trigger: CCTGCCTCCCTCCATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 72 bp CTTTTCGTGGGCACTGTCTCTCACCCCACACCATCTTaGAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: LFVGTVSHPTPS*RVEVLPDPSQA
Trigger: TGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCACGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR CCA 72 bp TGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTaGCCACTGTTACTGCCCTATGGGAGAGAAGCACTT +
Preference number: 3 (lower is better)
Translates to: CTCVWHKQETGL*PLLLPYGREAL
Trigger: AAGTGCTTCTCTCCCATAGGGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 72 bp GTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATGCTaGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: VVSCLCATALQC*VHPGLQCLRSS
Trigger: TGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTTGCACACAAACAGGACACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CCA 72 bp TTGAATTTCCGCATCAGACTTGTGAGGCCCAGCCTGTaGGCAAGATGCAAACACTGGTTCCACCAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: LNFRIRLVRPSL*ARCKHWFHQGR
Trigger: CCTGCCCTGGTGGAACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCGGAAATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp CTGGACCTCAGAGGTCTAGCTTTCCTCATAGCACCATaGCATACACAATGTGCTGGACTGCCTCGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: LDLRGLAFLIAP*HTQCAGLPRCS
Trigger: GGAGCACCGAGGCAGTCCAGCACATTGTGTATGTCATGGTGCTATGAGGAAAGCTAGACCTCTGAGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp TCACAGGGAAGATGCTCTTGGCTAAAACAGGTCCACTaGACACAGCACAGGGACCCAGCCTCTGCCACAGAT +
Preference number: 3 (lower is better)
Translates to: SQGRCSWLKQVH*TQHRDPASATD
Trigger: ATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGTTTTAGCCAAGAGCATCTTCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR TCA 72 bp ACAGAAGGAACGCCGGGGTTCCTGTTCAGAAAGATCTaGTCGTCCAGTCTGGTGATGCCCTTCTGGATGACC +
Preference number: 3 (lower is better)
Translates to: TEGTPGFLFRKI*SSSLVMPFWMT
Trigger: GGTCATCCAGAAGGGCATCACCAGACTGGACGATCAGATCTTTCTGAACAGGAACCCCGGCGTTCCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR TCA 72 bp GTCAGTATCCCAGATCCTGACAATGCGCACGTCCCCTaGGCTCATGAGAAGGCCAGTTTCTTGTTCCCAGTC +
Preference number: 3 (lower is better)
Translates to: VSIPDPDNAHVP*AHEKASFLFPV
Trigger: GACTGGGAACAAGAAACTGGCCTTCTCATGAGCTCAGGGGACGTGCGCATTGTCAGGATCTGGGATACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR TCA 72 bp GTCCACTGTGCACTGCCGAAGACACTTCATGCTCACTaGGCAATCTGGACTTATTACTGGCAGTGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: VHCALPKTLHAH*AIWTYYWQWGG
Trigger: GCCACCCCACTGCCAGTAATAAGTCCAGATTGCTCAGTGAGCATGAAGTGTCTTCGGCAGTGCACAGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 72 bp TGTGGGGTCAACTTGAAGCAGCCAGACAGTGAAAGGTaGAGGTTGACCCCACTGAGCCTTCTCTCTAGCCCT +
Preference number: 3 (lower is better)
Translates to: CGVNLKQPDSER*RLTPLSLLSSP
Trigger: AGGGCTAGAGAGAAGGCTCAGTGGGGTCAACCTTCACCTTTCACTGTCTGGCTGCTTCAAGTTGACCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 72 bp GGTCCTGTGGAGGACAGAGACAAAGGCTGTACACTCTaGAAGGGCCTTCTGCTTAGAAACAGGGGGCTGCAT +
Preference number: 3 (lower is better)
Translates to: GPVEDRDKGCTL*KGLLLRNRGLH
Trigger: ATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGTCTCTGTCCTCCACAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 72 bp TCCTTCCGGACCATGGGGCTTCCATCATTGATCAGCTaGGCCAGCATCATGGCCACATTGTGGTCAATGGTG +
Preference number: 3 (lower is better)
Translates to: SFRTMGLPSLIS*ASIMATLWSMV
Trigger: CACCATTGACCACAATGTGGCCATGATGCTGGCTCAGCTGATCAATGATGGAAGCCCCATGGTCCGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp AGTGGTCTGTCCTCTCAGCAGAATTTCCCACAAAGGTaGCCAGGGCAAATACAGCTGCACATCGGACCTCAG +
Preference number: 3 (lower is better)
Translates to: SGLSSQQNFPQR*PGQIQLHIGPQ
Trigger: CTGAGGTCCGATGTGCAGCTGTATTTGCCCTGGGCACCTTTGTGGGAAATTCTGCTGAGAGGACAGACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTTCTCTCTTCCCCCAATaGCTCTTATCCATTTCCCAG +
Preference number: 3 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLSLFPQ*LLSISQ
Trigger: CTGGGAAATGGATAAGAGCAATTGGGGGAAGAGAGA...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp GGGTGGCCTCTGCCATCTGGAAGGAGCTTGAATAGTGCTAAGGAGAGGGGAGATGAGAAGGCCAGTTTCTaGTTCCCAGTCTACCACCAT +
Preference number: 3 (lower is better)
Translates to: GWPLPSGRSLNSAKERGDEKASF*FPVYHH
Trigger: ATGGTGGTAGACTGGGAACAAGAAACTGGCCTTCTC...ATCTCCCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR CAA 90 bp GCTGTCAGCCCCTTCACAATCTGCATTACATTCACAGACTCGGGCATCCGAGGGTACCCAGTTAGGGTCTaGAAGCCTGGGTGCCATTTT +
Preference number: 3 (lower is better)
Translates to: AVSPFTICITFTDSGIRGYPVRV*KPGCHF
Trigger: AAAATGGCACCCAGGCTTCAAGACCCTAACTGGGTA...CCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 72 bp ATATGTGCAGGAGGGGAAACTATGGGCCTGCATGAATaGACACCTAAGTGTACATGGGCAGGAAGACCAGGG +
Preference number: 3 (lower is better)
Translates to: ICAGGETMGLHE*TPKCTWAGRPG
Trigger: CCCTGGTCTTCCTGCCCATGTACACTTAGGTGTGCATTCATGCAGGCCCATAGTTTCCCCTCCTGCACATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp GCTTCTCCACCGAATACACGGAAATGTAGTAGTCATTaGTTCCTACGGCCAGATGAGGCCAGTGTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: ASPPNTRKCSSH*FLRPDEASVGG
Trigger: TCCACCCACACTGGCCTCATCTGGCCGTAGGAAGCAATGACTACTACATTTCCGTGTATTCGGTGGAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp CACACGCCGCATCTTGTCGATGGTCTCGAAGGACAGGATGTACTCCTCGTTCTCTCTCTCTTCCCCCAATaGCTCTTATCCATTTCCCAG +
Preference number: 3 (lower is better)
Translates to: HTPHLVDGLEGQDVLLVLSLFPQ*LLSISQ
Trigger: CTGGGAAATGGATAAGAGCAATTGGGGGAAGAGAGA...GAGAACGAGGAGTACATCCTGTCCTTCGAGACCATCGACAAGATGCGGCGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGCTTTTCAAAACATCATaGTGTTGTGTCCTGTTTGTG +
Preference number: 3 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVLFKTS*CCVLFV
Trigger: CACAAACAGGACACAACACAATGATGTTTTGAAAAG...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR-3UTR CAA 90 bp GTAGCTGTTGACGATTACAGCAAGAATGAAGGCTGTCATGGTCCTATGTTCAGCCTTCACGAGGTCAGCTaGGCACGACTGCAGGACGAT +
Preference number: 3 (lower is better)
Translates to: VAVDDYSKNEGCHGPMFSLHEVS*ARLQDD
Trigger: ATCGTCCTGCAGTCGTGCCAAGCTGACCTCGTGAAG...GCTGAACATAGGACCATGACAGCCTTCATTCTTGCTGTAATCGTCAACAGCTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139728.8
3UTR TCA 72 bp CTAGGTCAGCGCTCTCTCGAGCTTTGCTTAGCTTCATaGTTGAATTTCCGCATCAGACTTGTGAGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LGQRSLELCLAS*LNFRIRLVRPS
Trigger: GCTGGGCCTCACAAGTCTGATGCGGAAATTCAATCATGAAGCTAAGCAAAGCTCGAGAGAGCGCTGACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp GCTCCTCGTGTTGTTGGAAGCATGTCTGAGAGCCCTTaGCACGCAGTCACCATCTCTGGATTCTTTTCCAAA +
Preference number: 3 (lower is better)
Translates to: APRVVGSMSESP*HAVTISGFFSK
Trigger: TTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGCTTCCAACAACACGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR GCA 72 bp GGTGCCATCTTCTTGTCTGGTATCAGAGGTCCACTGTaGACTGCCGAAGACACTTCATGCTCACTGAGCAAT +
Preference number: 3 (lower is better)
Translates to: GAIFLSGIRGPL*TAEDTSCSLSN
Trigger: ATTGCTCAGTGAGCATGAAGTGTCTTCGGCAGTGCACAGTGGACCTCTGATACCAGACAAGAAGATGGCACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CCA 72 bp TCACTGAGCAATCTGGACTTATTACTGGCAGTGGGGTaGCCTCTGCCATCTGGAAGGAGCTTGAATAGTGCT +
Preference number: 3 (lower is better)
Translates to: SLSNLDLLLAVG*PLPSGRSLNSA
Trigger: AGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCCCACTGCCAGTAATAAGTCCAGATTGCTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR-3UTR CAA 90 bp CTTTCAAAGGTCCTGTGGAGGACAGAGACAAAGGCTGTACACTCTGAAAGGGCCAATCACAAGACAGACTaGTCACACAGCTGTCAGCAC +
Preference number: 3 (lower is better)
Translates to: LSKVLWRTETKAVHSERANHKTD*SHSCQH
Trigger: GTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATT...GGCCCTTTCAGAGTGTACAGCCTTTGTCTCTGTCCTCCACAGGACCTTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR GCA 72 bp CGGCTTTATTCTTTATTAACACTCTGTTGCTGTCACTaGTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAG +
Preference number: 3 (lower is better)
Translates to: RLYSLLTLCCCH*SGRHCSSVSCQ
Trigger: CTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAGAGTGTTAATAAAGAATAAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp GGCACAAATGAAGCTCTTGTGTCCGGCAGCATCATCTaGATCATCTGTGGTCTGATCAGGGCCTTTGTCAAA +
Preference number: 3 (lower is better)
Translates to: GTNEALVSGSII*IICGLIRAFVK
Trigger: TTTGACAAAGGCCCTGATCAGACCACAGATGATGCAGATGATGCTGCCGGACACAAGAGCTTCATTTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR GCA 72 bp CCTGGGTGCCATTTTGAGATGAGGAAGACCTGGTCCTaGCTTAGTCAGCAGTTTAGTGAGGTCACTGTTTCT +
Preference number: 3 (lower is better)
Translates to: PGCHFEMRKTWS*LSQQFSEVTVS
Trigger: AGAAACAGTGACCTCACTAAACTGCTGACTAAGGCAGGACCAGGTCTTCCTCATCTCAAAATGGCACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CCA 72 bp TTGAAGCCTGGGTGCCATTTTGAGATGAGGAAGACCTaGTCCTGCCTTAGTCAGCAGTTTAGTGAGGTCACT +
Preference number: 3 (lower is better)
Translates to: LKPGCHFEMRKT*SCLSQQFSEVT
Trigger: AGTGACCTCACTAAACTGCTGACTAAGGCAGGACCAGGTCTTCCTCATCTCAAAATGGCACCCAGGCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR TCA 72 bp TTGTGTCCGGCAGCATCATCTGCATCATCTGTGGTCTaGTCAGGGCCTTTGTCAAACATCTTTCGTGTTCGA +
Preference number: 3 (lower is better)
Translates to: LCPAASSASSVV*SGPLSNIFRVR
Trigger: TCGAACACGAAAGATGTTTGACAAAGGCCCTGATCAGACCACAGATGATGCAGATGATGCTGCCGGACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
3UTR TCA 72 bp ACTATTAAAAGAAACTCCTATGAGGGAGTTGAGCGCTaGGTAGGAGCTCACACGCCGCATCTTGTCGATGGT +
Preference number: 3 (lower is better)
Translates to: TIKRNSYEGVER*VGAHTPHLVDG
Trigger: ACCATCGACAAGATGCGGCGTGTGAGCTCCTACTCAGCGCTCAACTCCCTCATAGGAGTTTCTTTTAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR GCA 72 bp AGGAGCCCCAGCACGGCTATTCTACAGGGCGCTGTCTaGTCTGTAACTAATGCTTTGATCACATGGAAAAAT +
Preference number: 3 (lower is better)
Translates to: RSPSTAILQGAV*SVTNALITWKN
Trigger: ATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCCCTGTAGAATAGCCGTGCTGGGGCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR GCA 72 bp GACATCTCACGGCTTTATTCTTTATTAACACTCTGTTaGTGTCACTGCTCTGGACGCCACTGCAGTTCCGTG +
Preference number: 3 (lower is better)
Translates to: DISRLYSLLTLC*CHCSGRHCSSV
Trigger: CACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAGAGTGTTAATAAAGAATAAAGCCGTGAGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CCA 72 bp AAAACAGATGCTGTCCTTGTCGGCGACAGCTATGCATaGTGTAAAGGGATGGAATTTGACCACAGAAGGAAC +
Preference number: 3 (lower is better)
Translates to: KTDAVLVGDSYA*CKGMEFDHRRN
Trigger: GTTCCTTCTGTGGTCAAATTCCATCCCTTTACACCATGCATAGCTGTCGCCGACAAGGACAGCATCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp GCAGTACCCGGGCGGCTGGAAGGCAGGTCACGGCTGACAGTCTGCTTGGCCACAGGCTCCCCAAGGTGCTaGTGGCACTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: AVPGRLEGRSRLTVCLATGSPRC*WHCCWC
Trigger: GCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCC...TGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCCGGGTACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131217.2
CDS-3UTR CCA 90 bp GGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCCTGTGCGGCCAAGCTCCCTCCCTCTGTaGCTGCTGGAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GSTRAGKQPSPSGGPVRPSSLPL*LLEKAK
Trigger: CTTTGCCTTCTCCAGCAGCCACAGAGGGAGGGAGCT...TGGCCGCACAGGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
3UTR CAA 72 bp GGCGGGGAGCCTCCCACCTGGTGCATGTGCATGCCCTaGTTGGTTGGGCTGGCTGGGGCCGACTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGEPPTWCMCMP*LVGLAGADCVR
Trigger: TCTCACACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
3UTR CAA 72 bp AGGGAGGCAGGCAGGGTACCTACCAGGCGATCAGGTTaGCCTGGGGGTGGATGTCCAGGGCTGTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: REAGRVPTRRSG*PGGGCPGLSAP
Trigger: AGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGCCTCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 72 bp GGGGAGCCTCCCACCTGGTGCATGTGCATGCCCTTGTaGGTTGGGCTGGCTGGGGCCGACTGTGTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GEPPTWCMCMPL*VGLAGADCVRE
Trigger: CTCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACATGCACCAGGTGGGAGGCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp GCCTGCTTCCTGACTCGAGTGTTCCTCAGGAACCGCCACTCACGCTCCTTGCGGCAGGGCTCCCCAAGGTaGTGCTGGCACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACFLTRVFLRNRHSRSLRQGSPR*CWHCCW
Trigger: CCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCCCTG...CCGCAAGGAGCGTGAGTGGCGGTTCCTGAGGAACACTCGAGTCAGGAAGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp AGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGGTCCTAGGGCTGCTGGTGCTAGATaGTGGCGGGGAGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RLAHYVQQRWLRPGSGPRAAGAR*WRGASH
Trigger: GTGGGAGGCTCCCCGCCAGCATCTAGCACCAGCAGC...CCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCCTGTGCGGCCACTTGTACCGAGCCCTTaGCTGCCAGTTCTCATACTG +
Preference number: 4 (lower is better)
Translates to: GSTRAGKQPSPSGGPVRPLVPSP*LPVLIL
Trigger: CAGTATGAGAACTGGCAGCCAAGGGCTCGGTACAAG...TGGCCGCACAGGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp GGAACTGCAGGTAGGGCTAGGAGGAGTGGGCTGAACTGGAGCTGGCAGCCCTGCTGTGCATGCCCTTGTTaGTTGGGCTGGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GTAGRARRSGLNWSWQPCCACPC*LGWLGP
Trigger: CGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACA...GCAGGGCTGCCAGCTCCAGTTCAGCCCACTCCTCCTAGCCCTACCTGCAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 72 bp GCACTGAGGAGGTCCTTGGTGCCTGGGTGCTGGTTCTaGATGGGAAGCCAGGCCAACCCCTCCCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALRRSLVPGCWF*MGSQANPSPAL
Trigger: CAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 72 bp TGCCCTGAACCAGACCCTCTCCTGCAGCTAGCTCACTaGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: CPEPDPLLQLAH*RAPARLDLRGL
Trigger: TAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGCTAGCTGCAGGAGAGGGTCTGGTTCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 72 bp GGGCGGCTGGAAGGCAGGTCACGGCTGACAGTCTGCTaGGCCACATCATTGGTCAGGCTGCAGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GRLEGRSRLTVC*ATSLVRLQLLV
Trigger: CACCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp GGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAGGGGTGTGGGTCGCTaGGCTGCTCCAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: GLPVATLLYGPTKGLASLRGVGR*AAPDRW
Trigger: CCATCTGTCTGGAGCAGCTCAGCGACCCACACCCCT...CAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp AGGGAGGCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTGGATGTCACTGCTGCTGGTGCTaGGGTTCCCGGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: REAGRVPTRRSGLPGGGCHCCWC*GSRERR
Trigger: CCTTCTCTCCCGGGAACCTCAGCACCAGCAGCAGTG...ACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGCCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR TCA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCGCTGAGCCTGCTTCCTaGCTCGAGTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGAEPAS*LECSSG
Trigger: TCCTGAGGAACACTCGAGTCAGGAAGCAGGCTCAGC...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp ACAAGGACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCGGAAAGCCAGGCAGCTaGTGGCCCCGACTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TRTELTHTQPLKLSAELSGKPGS*WPRLAG
Trigger: GCCAGCGAGTCGGGGCCATCAGCTGCCTGGCTTTCC...GCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGTCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GGTTCCACCAGGGCAGGGAAGCAGCCCAGCCCATCAGGCGGCCCTGTGCGGCCATGGTGTACCGAGGGTTaGCATTGTGGAAATAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSTRAGKQPSPSGGPVRPWCTEG*HCGNSP
Trigger: TGGACTATTTCCACAATGGCAACCCTCGGTACACCA...TGGCCGCACAGGGCCGCCTGATGGGCTGGGCTGCTTCCCTGCCCTGGTGGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp ACGGAGTCTGGGGGTGCATGGGCTGTCTCGAACTGGGGTCAAGCTCCCTCCCTCGGAGGCAAGGGCATCTaGGCAAGTGGATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: TESGGAWAVSNWGQAPSLGGKGI*ASGWFG
Trigger: CCCAAACCATCCACTTGCCCAGATGCCCTTGCCTCC...GAGGGAGGGAGCTTGACCCCAGTTCGAGACAGCCCATGCACCCCCAGACTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp TGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAGCCCCACCCCAGGCCTGCCACATaGCATGCATGTATGTCGGGG +
Preference number: 4 (lower is better)
Translates to: CRHTALWPNQGAGFLEPHPRPAT*HACMSG
Trigger: CCCCGACATACATGCATGCCATGTGGCAGGCCTGGG...GTGGGGCTCAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCCACTGCTGCTGGTGCTaGGGTTCCCGGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAHCCWC*GSRERR
Trigger: CCTTCTCTCCCGGGAACCTCAGCACCAGCAGCAGTG...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp ACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCCATGGCTTAGCAGCACCTaGAGGACGATGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TQCAGLPRCSRRARLRLPWLSST*RTMGSC
Trigger: GCAGCTGCCCATCGTCCTGCAGGTGCTGCTAAGCCA...TGGAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp TTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTTCCCAGCAAGTCCAATaGTCTCAGCCGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: LVPGCWFLMGSQANPSPASQQVQ*SQPVHL
Trigger: CAGGTGCACCGGCTGAGAGCATTGGACTTGCTGGGA...AGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp AGCAGTGCAGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGAACGGAGTCTGGGGGTaGATGGGCTGTCTCGAACTG +
Preference number: 4 (lower is better)
Translates to: SSAGWLTMYSRGGCGLAVNGVWG*MGCLEL
Trigger: CAGTTCGAGACAGCCCATGCACCCCCAGACTCCGTT...CACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCTGCACTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp CATGACTGGCTGGGCAAAGTAGCGGGCACTCCAGTCACAGAACCCTGTCTGCATCAGGGCTCCCCAAGGTaGTGCTGGCACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HDWLGKVAGTPVTEPCLHQGSPR*CWHCCW
Trigger: CCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCCCTG...ATGCAGACAGGGTTCTGTGACTGGAGTGCCCGCTACTTTGCCCAGCCAGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131217.2
CDS-3UTR GCA 90 bp CTCGAGTGTTCCTCAGGAACCGCCACTCACGCTCCTTGCGGATCTGACTCTCTAGCTGCTGGTGCTAGATaGTGGCGGGGAGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LECSSGTATHAPCGSDSLAAGAR*WRGASH
Trigger: GTGGGAGGCTCCCCGCCAGCATCTAGCACCAGCAGC...TAGAGAGTCAGATCCGCAAGGAGCGTGAGTGGCGGTTCCTGAGGAACACTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CCA 90 bp TGCACTGAGGAGGTCCTTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCGGAGGTCAGGGATCATaGGCAGCAGCTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: CTEEVLGAWVLVLDGKPGGGQGS*AAARVP
Trigger: AGGCACACGAGCTGCTGCCCATGATCCCTGACCTCC...GCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGCAAATGGCCACCCACTaGCGTAGCAAGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVQMATH*RSKGCG
Trigger: CCCACACCCCTTGCTACGCCAGTGGGTGGCCATTTG...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp AGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGGTCCTAGGTCCTTCCCAGGCAAATaGCCACCCACTGGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: RLAHYVQQRWLRPGSGPRSFPGK*PPTGVA
Trigger: TGCTACGCCAGTGGGTGGCCATTTGCCTGGGAAGGA...CCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp ACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCCATGGGCTGTCTCGAACTaGGGTCAAGCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TQCAGLPRCSRRARLRLPWAVSN*GQAPSL
Trigger: GAGGGAGGGAGCTTGACCCCAGTTCGAGACAGCCCA...TGGAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGAGCTGTCAGCACCCGTaGGGATGTCCTGCACCTTCG +
Preference number: 4 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVSCQHP*GCPAPS
Trigger: CGAAGGTGCAGGACATCCCCACGGGTGCTGACAGCT...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
3UTR CAA 72 bp GGCAGGTCACGGCTGACAGTCTGCTTGGCCACATCATaGGTCAGGCTGCAGCTGCTGGTGCTAGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRSRLTVCLATS*VRLQLLVLDAG
Trigger: GCCAGCATCTAGCACCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp GGTAAGTCAGGTGGCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCGAAGCTCTCGGGCTaGGCTCTGAAGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GKSGGSRAFLSPHCSMAQPKLSG*ALKQLQ
Trigger: CTGAAGCTGCTTCAGAGCTCAGCCCGAGAGCTTCGG...TTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGCCACCTGACTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp CATGACTGGCTGGGCAAAGTAGCGGGCACTCCAGTCACAGAACCCTGTCTGCATCACTGCTGCTGGTGCTaGGGTTCCCGGGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HDWLGKVAGTPVTEPCLHHCCWC*GSRERR
Trigger: CCTTCTCTCCCGGGAACCTCAGCACCAGCAGCAGTG...ATGCAGACAGGGTTCTGTGACTGGAGTGCCCGCTACTTTGCCCAGCCAGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131217.2
CDS-3UTR TCA 90 bp TCCTCTCCCCAACTGCTCTGCAGGAGGGAACTGCAGGTAGGGCTAGGAGGAGTGAAGGCAGGTCACGGCTaGCAGTCTGCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SSPQLLCRRELQVGLGGVKAGHG*QSAWPH
Trigger: ATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTT...CACTCCTCCTAGCCCTACCTGCAGTTCCCTCCTGCAGAGCAGTTGGGGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR TCA 90 bp GGTAAGTCAGGTGGCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAGGCCAGCCACAATaGGCGAACGGTGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: GKSGGSRAFLSPHCSMAQPGQPQ*ANGANH
Trigger: GTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGG...TTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGCCACCTGACTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTCACTTGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTAGCTTTCCTCATAAATGCTCTCAGCCGGTaGACCTGGCTTAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: AHLRAPARLDLRGLAFLINALSR*TWLSST
Trigger: GGTGCTGCTAAGCCAGGTGCACCGGCTGAGAGCATT...TATGAGGAAAGCTAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGCTGGCCACGGCAGGGCTCCCCAAGGTaGTGCTGGCACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VIVKTEGRMCKPLLSWPRQGSPR*CWHCCW
Trigger: CCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCCCTG...CCGTGGCCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTCACGGCTGACAGTCTaGTTGGCCACATCATTGGTC +
Preference number: 4 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGSRLTV*LATSLV
Trigger: GACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGA...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCATGTCTGAGAGCCCTTaGCACGCAGTCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGMSESP*HAVTIS
Trigger: AGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACAT...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GGTAGGTGGGCACTGCATCCGAGCAGTGCAGGCTGGCTCACTATGTACAGCAGAGCCGAGCACAGGGTGTaGTCTTCACCACATCCGGAG +
Preference number: 4 (lower is better)
Translates to: GRWALHPSSAGWLTMYSRAEHRV*SSPHPE
Trigger: CTCCGGATGTGGTGAAGACCACACCCTGTGCTCGGC...TCTGCTGTACATAGTGAGCCAGCCTGCACTGCTCGGATGCAGTGCCCACCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp CAGGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACAGGTTTGCCTGGGGGTaGATGTCCAGGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QGLLFCLPRTAQPVGSSHRFAWG*MSRAVS
Trigger: GCTGACAGCCCTGGACATCCACCCCCAGGCAAACCT...GTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp CCCACCCGGTTGGGAGAATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTTTTCCACACCCATTGTaGGCCACACCTGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PTRLGECISRGRARVSCSFPHPL*ATPGML
Trigger: CAGCATTCCAGGTGTGGCTCACAATGGGTGTGGAAA...AGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp CCCACCCGGTTGGGAGAATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTGGATTTTGGCCCAGATaGAGACAAGGAGTGGCCGAA +
Preference number: 4 (lower is better)
Translates to: PTRLGECISRGRARVSCSGFWPR*RQGVAE
Trigger: TTCGGCCACTCCTTGTCTTCATCTGGGCCAAAATCC...AGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp TGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAGCCCCACTGGGGCTTCCATCATTaGTCAGCTGAGCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: CRHTALWPNQGAGFLEPHWGFHH*SAEPAS
Trigger: TGATGCTGGCTCAGCTGATCAATGATGGAAGCCCCA...GTGGGGCTCAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp ATACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCAAGGCAGGTCACGGCTaGCAGTCTGCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: IHNVLDCLGAPGGPGSDFKAGHG*QSAWPH
Trigger: ATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTT...GAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp ACAAAGGCTGTACACTCTGAAAGGGCCTTCTGCTTAGAAACAGGGGGCTGCATGGGGAGAGAAGGCCACTaGGCTGCCCGCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TKAVHSERAFCLETGGCMGREGH*AARCGC
Trigger: GCAGCCACAGCGGGCAGCTCAGTGGCCTTCTCTCCC...CATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp GCATCCGAGCAGTGCAGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGCTACCTCTAGTTCCTaGTCCCTCTGCAGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ASEQCRLAHYVQQRWLRPATSSS*SLCSAN
Trigger: GTTTGCACTGCAGAGGGAGCAGGAACTAGAGGTAGC...AGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCTGCACTGCTCGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp TTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTGCAAAGAATGGGCTGTaGCTGAAGGCAGTACCCTCT +
Preference number: 4 (lower is better)
Translates to: LVPGCWFLMGSQANPSPAAKNGL*LKAVPS
Trigger: AGAGGGTACTGCCTTCAGGCACAGCCCATTCTTTGC...AGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GATGGGAAGCCAGGCCAACCCCTCCCCTGCTCTGGACCTGTACGCTGTTATAGTGAGCCTCCCACCTGGTaGATGTGCATGCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DGKPGQPLPCSGPVRCYSEPPTW*MCMPLL
Trigger: CAACAAGGGCATGCACATGCACCAGGTGGGAGGCTC...ACTATAACAGCGTACAGGTCCAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCTGTGAACAGGTCGGCTaGGAGGTCAGGGATCATGGG +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTACEQVG*EVRDHG
Trigger: CCCATGATCCCTGACCTCCCAGCCGACCTGTTCACA...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp TTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTATTGTGAGCCACACCTaGAATGCTGTCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LVPGCWFLMGSQANPSPAIVSHT*NAVSCS
Trigger: CGAGCAGCTGACAGCATTCCAGGTGTGGCTCACAAT...AGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCGCAATCAGGTTTCCCTaGAGGCAGGCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAAIRFP*RQASCP
Trigger: AGGGCAAGAGGCCTGCCTCCAGGGAAACCTGATTGC...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp TGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAGCCCCACGCCGCATCTTGTCGATaGTCTCGAAGGACAGGATGT +
Preference number: 4 (lower is better)
Translates to: CRHTALWPNQGAGFLEPHAASCR*SRRTGC
Trigger: ACATCCTGTCCTTCGAGACCATCGACAAGATGCGGC...GTGGGGCTCAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GAACGGTGCGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGGTTGGTTGGGCTGGCTaGGGCCGACTGTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: ERCESQDRLVTQLSAPVGVGWAG*GRLCER
Trigger: TCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAAC...CCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CCA 90 bp TTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTTGGCACCATCATCTGTaGCTGTCAGCAGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVPGCWFLMGSQANPSPAWHHHL*LSAARN
Trigger: GTTCCTTGCTGCTGACAGCCACAGATGATGGTGCCA...AGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCCTCACACTCACGATGTaGCCCTCAGGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTALTLTM*PSGCFC
Trigger: GCAGAAGCACCCTGAGGGCCACATCGTGAGTGTGAG...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp AACTGCTCTGCAATGCTGGGTCCATCCAGGGCTGCAGTGCCTAAGGTCCTCACTGCGATCAGGTTTGCCTaGGGGTGGATGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NCSAMLGPSRAAVPKVLTAIRFA*GWMSRA
Trigger: AGCCCTGGACATCCACCCCCAGGCAAACCTGATCGC...AGTGAGGACCTTAGGCACTGCAGCCCTGGATGGACCCAGCATTGCAGAGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp CGGTGCGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGATGCTGAGCTGCCCGCTGTaGCTGCTGGAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RCESQDRLVTQLSAPVGMLSCPL*LLEKAK
Trigger: CTTTGCCTTCTCCAGCAGCCACAGCGGGCAGCTCAG...CATCCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR TCA 90 bp TTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTGATAGGAAGTACTTGTaGCCGTTGTCCTTCACGAGG +
Preference number: 4 (lower is better)
Translates to: LVPGCWFLMGSQANPSPADRKYL*PLSFTR
Trigger: CCTCGTGAAGGACAACGGTCACAAGTACTTCCTATC...AGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp CTCTTGGCTAAAACAGGTCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACCGCTCCTTGCGGATCTaGCTCTCTAGGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: LLAKTGPLNTAQGPSLCHRSLRI*LSRSCS
Trigger: GGAGCATGACCTAGAGAGTCAGATCCGCAAGGAGCG...GTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGTTTTAGCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTCTTCCTACGGCCAGATaGGGCCAGTGTGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLLPTAR*GQCGWK
Trigger: TTTCCACCCACACTGGCCTCATCTGGCCGTAGGAAG...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp TTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTGTGTGCCTCACACGCTaGCAACTGGATGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LVPGCWFLMGSQANPSPAVCLTR*QLDAVF
Trigger: AAAAACTGCATCCAGTTGGCAGCGTGTGAGGCACAC...AGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp AGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTGGCAGTGGTCCTAGGTCTTCCTCCATGAACTaGAGGGCCACAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RLAHYVQQRWLRPGSGPRSSSMN*RATVQK
Trigger: TTTCTGCACTGTGGCCCTGCAGTTCATGGAGGAAGA...CCTAGGACCACTGCCAGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp CCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGGGCTCCCCAAGGTGCTaGTGGCACTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PVRCYSEDRRKDVQAPPQGSPRC*WHCCWC
Trigger: GCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCC...CTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp CTTTCAAAGGTCCTGTGGAGGACAGAGACAAAGGCTGTACACTCTGAAAGGGCCGGCTCCCCAAGGTGCTaGTGGCACTGCTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSKVLWRTETKAVHSERAGSPRC*WHCCWC
Trigger: GCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCC...GGCCCTTTCAGAGTGTACAGCCTTTGTCTCTGTCCTCCACAGGACCTTTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp GGTTTGCCTGGGGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTGCATTACCCACCTGGTGCATGTaGATGCCCTTGTTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GLPGGGCPGLSAPSQSALPTWCM*MPLLVG
Trigger: CCCAACCAACAAGGGCATGCACATGCACCAGGTGGG...TAATGCAGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp GATGGGAAGCCAGGCCAACCCCTCCCCTGCTCTGGACCTGTACGCTGTTATAGTGCCACTCACGCTCCTTaGGGATCTGACTCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: DGKPGQPLPCSGPVRCYSATHAP*GSDSLG
Trigger: ACCTAGAGAGTCAGATCCGCAAGGAGCGTGAGTGGC...ACTATAACAGCGTACAGGTCCAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCCCGGCATTCACTGAGTaGCATCCTCCTGTCGTAGAC +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAPAFTE*HPPVVD
Trigger: GTCTACGACAGGAGGATGGCACTCAGTGAATGCCGG...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp CTCTTGGCTAAAACAGGTCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACGCTTGGCCACATCATTaGTCAGGCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLAKTGPLNTAQGPSLCHAWPHH*SGCSCW
Trigger: CCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGC...GTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGTTTTAGCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GTCCTGACCATTCAGGTACTCCATGGCGGTGACCCTGGTGTACCGAGGGTTGCCAATGGGCTGTGCACATaGCATGCATGTATGTCGGGG +
Preference number: 4 (lower is better)
Translates to: VLTIQVLHGGDPGVPRVANGLCT*HACMSG
Trigger: CCCCGACATACATGCATGCCATGTGCACAGCCCATT...GGCAACCCTCGGTACACCAGGGTCACCGCCATGGAGTACCTGAATGGTCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCGTTTCCAGAGCTTTCTaGGGGCCCATAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAVSRAF*GPIDRG
Trigger: TCCTCTGTCTATGGGCCCTCAGAAAGCTCTGGAAAC...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp ACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCCAAATTCTTCCAGACCCTaGTGGCACCATCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: TQCAGLPRCSRRARLRLPNSSRP*WHHHLW
Trigger: CCACAGATGATGGTGCCATCAGGGTCTGGAAGAATT...TGGAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp CCCGGGCGGCTGGAAGGCAGGTCACGGCTGACAGTCTGCTTGGCCACATCATTGGGATCAGCAGCCAGATaGAGTAAGACTCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: PGRLEGRSRLTVCLATSLGSAAR*SKTLQI
Trigger: AATTTGGAGAGTCTTACTGCATCTGGCTGCTGATCC...CAATGATGTGGCCAAGCAGACTGTCAGCCGTGACCTGCCTTCCAGCCGCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131217.2
CDS-3UTR GCA 90 bp TTGCTCTTATCCATTTCCCAGGACTGGCAGCACACTCTGAGAGGACAGTGGGGCCCCACCTGGTGCATGTaGATGCCCTTGTTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LLLSISQDWQHTLRGQWGPTWCM*MPLLVG
Trigger: CCCAACCAACAAGGGCATGCACATGCACCAGGTGGG...GCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGATAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GGGTGGCCTCTGCCATCTGGAAGGAGCTTGAATAGTGCTAAGGAGAGGGGAGATGAGCCTCCCACCTGGTaGATGTGCATGCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GWPLPSGRSLNSAKERGDEPPTW*MCMPLL
Trigger: CAACAAGGGCATGCACATGCACCAGGTGGGAGGCTC...ATCTCCCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CCA 90 bp CCCACCCGGTTGGGAGAATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTTCTGCAGGTCGTATATaGACAGAGGGATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: PTRLGECISRGRARVSCSSAGRI*TEGCTE
Trigger: CTCAGTACATCCCTCTGTCCATATACGACCTGCAGA...AGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp GGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACAGAGTCGTAGACAAAGATaGATGGGCTGCCCATCCACG +
Preference number: 4 (lower is better)
Translates to: GSPVLLAQDSSACRILSQSRRQR*MGCPST
Trigger: CGTGGATGGGCAGCCCATCCATCTTTGTCTACGACT...CTGTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCGGGCATCTGGGCAAGTaGATGGTTTGGGTTAATCGC +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAGHLGK*MVWVNR
Trigger: GCGATTAACCCAAACCATCCACTTGCCCAGATGCCC...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp CAGAGAGGAGGCTATAGAGCTTTTCGTGGGCACTGTCTCTCACCCCACACCATCTGTGAACAGGTCGGCTaGGAGGTCAGGGATCATGGG +
Preference number: 4 (lower is better)
Translates to: QRGGYRAFRGHCLSPHTICEQVG*EVRDHG
Trigger: CCCATGATCCCTGACCTCCCAGCCGACCTGTTCACA...GATGGTGTGGGGTGAGAGACAGTGCCCACGAAAAGCTCTATAGCCTCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTATCGGACCTCAGGGATaGGGTCAGAGAGGAGGCTAT +
Preference number: 4 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLIGPQG*GQRGGY
Trigger: ATAGCCTCCTCTCTGACCCCATCCCTGAGGTCCGAT...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp TGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAGCCCCACATCATGGCCACATTGTaGTCAATGGTGGTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CRHTALWPNQGAGFLEPHIMATL*SMVVEW
Trigger: CCACTCTACCACCATTGACCACAATGTGGCCATGAT...GTGGGGCTCAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp CGGATCGAGCCATCACCCAGGCCAGCCACAATGAGCGAACGGTGCGAATCACAAGCCGCATCTTGTCGATaGTCTCGAAGGACAGGATGT +
Preference number: 4 (lower is better)
Translates to: RIEPSPRPATMSERCESQAASCR*SRRTGC
Trigger: ACATCCTGTCCTTCGAGACCATCGACAAGATGCGGC...TTGTGATTCGCACCGTTCGCTCATTGTGGCTGGCCTGGGTGATGGCTCGATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 72 bp GCTTTTCGTGGGCACTGTCTCTCACCCCACACCATCTaGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AFRGHCLSPHTI*QSRSSARSFPG
Trigger: GCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCACGAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR CAA 72 bp GGCCGACTGTGTGAGAGAGGATGTGTCAAGGATTCGTaGGGGCCGGGCGTTCACTGTGGCCTTGTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: GRLCERGCVKDS*GPGVHCGLVSN
Trigger: ATTGCTTACAAGGCCACAGTGAACGCCCGGCCCCAACGAATCCTTGACACATCCTCTCTCACACAGTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp ACAAGGACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCGTTTCCAGAGCTTTCTaGGGGCCCATAGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: TRTELTHTQPLKLSAELSVSRAF*GPIDRG
Trigger: TCCTCTGTCTATGGGCCCTCAGAAAGCTCTGGAAAC...GCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp GGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACAGCTATCAAATCCAGTGTaGCTCCAGGCACCAGACTCA +
Preference number: 4 (lower is better)
Translates to: GSPVLLAQDSSACRILSQLSNPV*LQAPDS
Trigger: TGAGTCTGGTGCCTGGAGTCACACTGGATTTGATAG...CTGTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp CCCACCCGGTTGGGAGAATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTTGGGGTGCAGTTATATaGCCTCATGATTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PTRLGECISRGRARVSCSWGAVI*PHDSFC
Trigger: GCAGAAAGAATCATGAGGTCATATAACTGCACCCCA...AGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp TGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGCTGGCCACGCTGGGGCCGACTGTGTaGGAGAGGATGTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: CYSEDRRKDVQAPPQLATLGPTV*ERMCQG
Trigger: TCCTTGACACATCCTCTCTCACACAGTCGGCCCCAG...CGTGGCCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp GTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGCTGGCCACGGTGTTGGAAGCATGTCTaGGAGCCCTTGCCACGCAGT +
Preference number: 4 (lower is better)
Translates to: VIVKTEGRMCKPLLSWPRCWKHV*EPLPRS
Trigger: ACTGCGTGGCAAGGGCTCTCAGACATGCTTCCAACA...CCGTGGCCAGCTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGTGCCAGTTCTCATACTaGTTCTGTAGGTTTGCACCG +
Preference number: 4 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVCQFSY*FCRFAP
Trigger: CGGTGCAAACCTACAGAAGCAGTATGAGAACTGGCA...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp GCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTGGATGTCCAGGGACTGCAGGGCCACAGTaGAGAAATTGCTTTCATATT +
Preference number: 4 (lower is better)
Translates to: AGRVPTRRSGLPGGGCPGTAGPQ*RNCFHI
Trigger: AATATGAAAGCAATTTCTGCACTGTGGCCCTGCAGT...CCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp GCATCCGAGCAGTGCAGGCTGGCTCACTATGTACAGCAGAGGTGGCTGCGGCCTACAATGAGCGAACGGTaGGAATCACAAGACAGACTT +
Preference number: 4 (lower is better)
Translates to: ASEQCRLAHYVQQRWLRPTMSER*ESQDRL
Trigger: AAGTCTGTCTTGTGATTCGCACCGTTCGCTCATTGT...AGGCCGCAGCCACCTCTGCTGTACATAGTGAGCCAGCCTGCACTGCTCGGATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp ATGGGTCTGCCAAGACGGATAGGAAGTACTTGTGACCGTTGTCCTTCACGAGGTGCCGAGCACAGGGTGTaGTCTTCACCACATCCGGAG +
Preference number: 4 (lower is better)
Translates to: MGLPRRIGSTCDRCPSRGAEHRV*SSPHPE
Trigger: CTCCGGATGTGGTGAAGACCACACCCTGTGCTCGGC...ACCTCGTGAAGGACAACGGTCACAAGTACTTCCTATCCGTCTTGGCAGACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp ACAAGGACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCGTAGACAAAGATGGATaGGCTGCCCATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: TRTELTHTQPLKLSAELSVDKDG*AAHPRL
Trigger: CAGACGTGGATGGGCAGCCCATCCATCTTTGTCTAC...GCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp GGATGGGGTCAGAGAGGAGGCTATAGAGCTTTTCGTGGGCACTGTCTCTCACCCGTAGACAAAGATGGATaGGCTGCCCATCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: GWGQRGGYRAFRGHCLSPVDKDG*AAHPRL
Trigger: CAGACGTGGATGGGCAGCCCATCCATCTTTGTCTAC...GGGTGAGAGACAGTGCCCACGAAAAGCTCTATAGCCTCCTCTCTGACCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp CTCTTGGCTAAAACAGGTCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGTCGTAGACAAAGATaGATGGGCTGCCCATCCACG +
Preference number: 4 (lower is better)
Translates to: LLAKTGPLNTAQGPSLCHSRRQR*MGCPST
Trigger: CGTGGATGGGCAGCCCATCCATCTTTGTCTACGACT...GTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGTTTTAGCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp TTGCTCTTATCCATTTCCCAGGACTGGCAGCACACTCTGAGAGGACAGTGGGGCCTGCTCGGCAAAGAATaGGCTGTGCCTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLLSISQDWQHTLRGQWGLLGKE*AVPEGS
Trigger: ACTGCCTTCAGGCACAGCCCATTCTTTGCCGAGCAG...GCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGATAAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
3UTR CAA 72 bp CTGGCAGTGGGGTGGCCTCTGCCATCTGGAAGGAGCTaGAATAGTGCTAAGGAGAGGGGAGATGTGACAGTT +
Preference number: 4 (lower is better)
Translates to: LAVGWPLPSGRS*NSAKERGDVTV
Trigger: AACTGTCACATCTCCCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCCCACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 72 bp AGGTCAGCTTGGCACGAACTGTCGACAGCGAGGATTTaGGCCCAGATGAAGACAAGGAGTGGCCGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSAWHELSTARI*AQMKTRSGRSS
Trigger: AGAGCTTCGGCCACTCCTTGTCTTCATCTGGGCCAAAATCCTCGCTGTCGACAGTTCGTGCCAAGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp TCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCCATAGGAGCTCACTaGACGGAGTCTGGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SGPVRCYSEDRRKDVQAPPIGAH*TESGGA
Trigger: TGCACCCCCAGACTCCGTTCAGTGAGCTCCTATGGG...AGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp TTGCTCTTATCCATTTCCCAGGACTGGCAGCACACTCTGAGAGGACAGTGGGGCCGTCCCCTGAGCTCATaGGAAGGCCAGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LLLSISQDWQHTLRGQWGRPLSS*EGQFLV
Trigger: AACAAGAAACTGGCCTTCTCATGAGCTCAGGGGACG...GCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGATAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp TTGCTCTTATCCATTTCCCAGGACTGGCAGCACACTCTGAGAGGACAGTGGGGCCTGCCCATCCACGTCTaGAGGTCGTATATGGACAGA +
Preference number: 4 (lower is better)
Translates to: LLLSISQDWQHTLRGQWGLPIHV*RSYMDR
Trigger: TCTGTCCATATACGACCTGCAGACGTGGATGGGCAG...GCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGATAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp AACGGTGCGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGACTGCCCATCCACGTCTaGAGGTCGTATATGGACAGA +
Preference number: 4 (lower is better)
Translates to: NGANHKTDLSHSCQHPWGLPIHV*RSYMDR
Trigger: TCTGTCCATATACGACCTGCAGACGTGGATGGGCAG...TCCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp TCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGAGGAGGTCCTTGGTGCAAAGATGGATGGGCTaGCCATCCACGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEENRAGKDHAALRRSLVQRWMG*PSTSAG
Trigger: ACCTGCAGACGTGGATGGGCAGCCCATCCATCTTTG...CACCAAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCAGTTCCTGCTCCCTCTaGAGTGCAAACTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: VYLCVAQAGDRPVATVTASSCSL*SANCLK
Trigger: CTTCAAACAGTTTGCACTGCAGAGGGAGCAGGAACT...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp TGGGCACTGTCTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCGCTACCTCTAGTTCCTaGTCCCTCTGCAGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: WALSLTPHHLAESKFCQIATSSS*SLCSAN
Trigger: GTTTGCACTGCAGAGGGAGCAGGAACTAGAGGTAGC...GATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp GATGGGAAGCCAGGCCAACCCCTCCCCTGCTCTGGACCTGTACGCTGTTATAGTACGCTGCCAACTGGATaGAGTTTTTCATTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: DGKPGQPLPCSGPVRCYSTLPTG*SFSLRE
Trigger: CTCCCTCAATGAAAAACTGCATCCAGTTGGCAGCGT...ACTATAACAGCGTACAGGTCCAGAGCAGGGGAGGGGTTGGCCTGGCTTCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp TGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAGCCCCACACTGCAGGGCCACAGTaGAGAAATTGCTTTCATATT +
Preference number: 4 (lower is better)
Translates to: CRHTALWPNQGAGFLEPHTAGPQ*RNCFHI
Trigger: AATATGAAAGCAATTTCTGCACTGTGGCCCTGCAGT...GTGGGGCTCAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTCACTTGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTAGCTTTCCTCATAAGCCCCTTCACAATCTaGATTACATTCACAGACTCG +
Preference number: 4 (lower is better)
Translates to: AHLRAPARLDLRGLAFLISPFTI*ITFTDS
Trigger: CGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCT...TATGAGGAAAGCTAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACAGCTCTTCGATGATGGTTaGCAGCTGAGAGAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GSPVLLAQDSSACRILSQLFDDG*QLREAN
Trigger: ATTTGCCTCTCTCAGCTGCCAACCATCATCGAAGAG...CTGTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp TTGCTCTTATCCATTTCCCAGGACTGGCAGCACACTCTGAGAGGACAGTGGGGCGATGCAGTTTTTCATTaGGGGAGGCAAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LLLSISQDWQHTLRGQWGDAVFH*GRQGHL
Trigger: CAGATGCCCTTGCCTCCCTCAATGAAAAACTGCATC...GCCCCACTGTCCTCTCAGAGTGTGCTGCCAGTCCTGGGAAATGGATAAGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp CTCTTGGCTAAAACAGGTCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACCTGTTCAGAAAGATCTaGTCGTCCAGTCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LLAKTGPLNTAQGPSLCHLFRKI*SSSLVM
Trigger: CATCACCAGACTGGACGATCAGATCTTTCTGAACAG...GTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGTTTTAGCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTGTCAGCCCCTTCACAATCTGCATTACATTCACAGACTCGGGCATCCGAGGGGTGTGCCTCACACGCTaGCAACTGGATGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: AVSPFTICITFTDSGIRGVCLTR*QLDAVF
Trigger: AAAAACTGCATCCAGTTGGCAGCGTGTGAGGCACAC...CCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp ATACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCATTTCTAAACAAACTTaGCACGAGCAGGTCCTGTCG +
Preference number: 4 (lower is better)
Translates to: IHNVLDCLGAPGGPGSDFISKQT*HEQVLS
Trigger: CGACAGGACCTGCTCGTGGCAAGTTTGTTTAGAAAT...GAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp TCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGAGGAGGTCCTTGGTGGCAGAGTCGAAGTTCTaGCAGATCCTTCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SEENRAGKDHAALRRSLVAESKF*QILPRQ
Trigger: TTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGC...CACCAAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTGTCAGCCCCTTCACAATCTGCATTACATTCACAGACTCGGGCATCCGAGGGTCTTCCTCCATGAACTaGAGGGCCACAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: AVSPFTICITFTDSGIRGSSSMN*RATVQK
Trigger: TTTCTGCACTGTGGCCCTGCAGTTCATGGAGGAAGA...CCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp GCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCAAATCCTGGTGCATGTGCATaGCCTTGTTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ACLRALATQSPSLDSFPNPGACA*PCWLGW
Trigger: CCAGCCCAACCAACAAGGGCATGCACATGCACCAGG...ATTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CCA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTGTAGGTTTGCACCGATaGTTTCCAGAGCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLVGLHR*FPELSE
Trigger: CTCAGAAAGCTCTGGAAACCATCGGTGCAAACCTAC...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp GACTGGCTGGGCAAAGTAGCGGGCACTCCAGTCACAGAACCCTGTCTGCATAGATCTGCAGGTCGTATATaGACAGAGGGATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: DWLGKVAGTPVTEPCLHRSAGRI*TEGCTE
Trigger: CTCAGTACATCCCTCTGTCCATATACGACCTGCAGA...TCTATGCAGACAGGGTTCTGTGACTGGAGTGCCCGCTACTTTGCCCAGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp TCCCTTTGTAAAACCTCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGGGAGGTCAGGGATCATaGGCAGCAGCTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLCKTSEENRAGKDHAALGGQGS*AAARVP
Trigger: AGGCACACGAGCTGCTGCCCATGATCCCTGACCTCC...CAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGAGGTTTTACAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp CTGTTACTGCCCTATGGGAGAGAAGCACTTCAGAATATGCCTGATAGATGGAGGGAGTCTGGGGGTGCATaGGCTGTCTCGAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLLPYGREALQNMPDRWRESGGA*AVSNWG
Trigger: ACCCCAGTTCGAGACAGCCCATGCACCCCCAGACTC...CCTCCATCTATCAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp CTGTTACTGCCCTATGGGAGAGAAGCACTTCAGAATATGCCTGATAGATGGAGGGTTGGTTGGGCTGGCTaGGGCCGACTGTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLLPYGREALQNMPDRWRVGWAG*GRLCER
Trigger: TCTCTCACACAGTCGGCCCCAGCCAGCCCAACCAAC...CCTCCATCTATCAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCAAATGCTTGGCCACATCATTaGTCAGGCTGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACLRALATQSPSLDSFPNAWPHH*SGCSCW
Trigger: CCAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGC...ATTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
3UTR CAA 72 bp TCGGCGACAGCTATGCATGGTGTAAAGGGATGGAATTaGACCACAGAAGGAACGCCGGGGTTCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SATAMHGVKGWN*TTEGTPGFLFR
Trigger: TCTGAACAGGAACCCCGGCGTTCCTTCTGTGGTCAAATTCCATCCCTTTACACCATGCATAGCTGTCGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136662.8
ENSMUST00000147781.8
3UTR CAA 72 bp ACAGATGGCAATCAGGTTTCCCTGGAGGCAGGCCTCTaGCCCTGTTGTGTAGCTGTTGACGATTACAGCAAG +
Preference number: 4 (lower is better)
Translates to: TDGNQVSLEAGL*PCCVAVDDYSK
Trigger: CTTGCTGTAATCGTCAACAGCTACACAACAGGGCAAGAGGCCTGCCTCCAGGGAAACCTGATTGCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTTGGGGTGCAGTTATATaGCCTCATGATTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLWGAVI*PHDSFC
Trigger: GCAGAAAGAATCATGAGGTCATATAACTGCACCCCA...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp TCACGATGTGGCCCTCAGGGTGCTTCTGCAGGTAGGCCTTTACCACCCACGCTGTGTAAGCAATGCTGTTaGGGACTTTCATGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: SRCGPQGASAGRPLPPTLCKQCC*GLSWLN
Trigger: ATTTAGCCATGAAAGTCCTCAACAGCATTGCTTACA...CAGCGTGGGTGGTAAAGGCCTACCTGCAGAAGCACCCTGAGGGCCACATCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp CACACGCCGCATCTTGTCGATGGTCTCGAAGGACAGGATGTACTCCTCGTTCTCAGTTCCTGCTCCCTCTaGAGTGCAAACTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HTPHLVDGLEGQDVLLVLSSCSL*SANCLK
Trigger: CTTCAAACAGTTTGCACTGCAGAGGGAGCAGGAACT...GAGAACGAGGAGTACATCCTGTCCTTCGAGACCATCGACAAGATGCGGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp CTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCATTTCTAAACAAACTTaGCACGAGCAGGTCCTGTCG +
Preference number: 4 (lower is better)
Translates to: LSPHTILQSRSSARSFPGISKQT*HEQVLS
Trigger: CGACAGGACCTGCTCGTGGCAAGTTTGTTTAGAAAT...GCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp ACAAAGGCTGTACACTCTGAAAGGGCCTTCTGCTTAGAAACAGGGGGCTGCATGTCACGGCTGACAGTCTaGTTGGCCACATCATTGGTC +
Preference number: 4 (lower is better)
Translates to: TKAVHSERAFCLETGGCMSRLTV*LATSLV
Trigger: GACCAATGATGTGGCCAAGCAGACTGTCAGCCGTGA...CATGCAGCCCCCTGTTTCTAAGCAGAAGGCCCTTTCAGAGTGTACAGCCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CCA 90 bp CCTGTCTGCATAGAGGCACAAATGAAGCTCTTGTGTCCGGCAGCATCATCTGCAGCCGCATCTTGTCGATaGTCTCGAAGGACAGGATGT +
Preference number: 4 (lower is better)
Translates to: PVCIEAQMKLLCPAASSAAASCR*SRRTGC
Trigger: ACATCCTGTCCTTCGAGACCATCGACAAGATGCGGC...TGCAGATGATGCTGCCGGACACAAGAGCTTCATTTGTGCCTCTATGCAGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131217.2
CDS-3UTR CCA 90 bp GGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACAGCATGGTGTAAAGGGATaGAATTTGACCACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GSPVLLAQDSSACRILSQHGVKG*NLTTEG
Trigger: TCCTTCTGTGGTCAAATTCCATCCCTTTACACCATG...CTGTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp CCGCATCAGACTTGTGAGGCCCAGCCTGTGGGCAAGATGCAAACACTGGTTCCAGGCGACAGCTATGCATaGTGTAAAGGGATGGAATTT +
Preference number: 4 (lower is better)
Translates to: PHQTCEAQPVGKMQTLVPGDSYA*CKGMEF
Trigger: AAATTCCATCCCTTTACACCATGCATAGCTGTCGCC...TGGAACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp CAGAACCCTGTCTGCATAGAGGCACAAATGAAGCTCTTGTGTCCGGCAGCATCAGATGCAGTTTTTCATTaGGGGAGGCAAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: QNPVCIEAQMKLLCPAASDAVFH*GRQGHL
Trigger: CAGATGCCCTTGCCTCCCTCAATGAAAAACTGCATC...TGATGCTGCCGGACACAAGAGCTTCATTTGTGCCTCTATGCAGACAGGGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp AAGGGATGGAATTTGACCACAGAAGGAACGCCGGGGTTCCTGTTCAGAAAGATCTATTGGACTACAAGGTaGCTCAGAGCCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: KGWNLTTEGTPGFLFRKIYWTTR*LRATTS
Trigger: GCTGGTGGTGGCTCTGAGTCACCTTGTAGTCCAATA...GATCTTTCTGAACAGGAACCCCGGCGTTCCTTCTGTGGTCAAATTCCATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp TCCCTTTGTAAAACCTCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGGCAAGGTCCCAGGCCTaGCACATGGCATGCATGTAT +
Preference number: 4 (lower is better)
Translates to: SLCKTSEENRAGKDHAALARSQA*HMACMY
Trigger: ATACATGCATGCCATGTGGCAGGCCTGGGACCTTGC...CAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGAGGTTTTACAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GGGTGGCCTCTGCCATCTGGAAGGAGCTTGAATAGTGCTAAGGAGAGGGGAGATGGATCAGCAGCCAGATaGAGTAAGACTCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: GWPLPSGRSLNSAKERGDGSAAR*SKTLQI
Trigger: AATTTGGAGAGTCTTACTGCATCTGGCTGCTGATCC...ATCTCCCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp CTGTTGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGTGTCCTGTCAGTCCTTAAATGTAGTAGTCATTaGTTCCTACGGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: LLLSLLWTPLQFRVLSVLKCSSH*FLRPDE
Trigger: CTCATCTGGCCGTAGGAAGCAATGACTACTACATTT...AAGGACTGACAGGACACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp AGTGGTCCTAGGTGCCGCTATCTGACACGCTTCTCCACCGAATACACGGAAATGGTAGGTTTGCACCGATaGTTTCCAGAGCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SGPRCRYLTRFSTEYTEMVGLHR*FPELSE
Trigger: CTCAGAAAGCTCTGGAAACCATCGGTGCAAACCTAC...CATTTCCGTGTATTCGGTGGAGAAGCGTGTCAGATAGCGGCACCTAGGACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp TCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTGGGCATCTGGGCAAGTaGATGGTTTGGGTTAATCGC +
Preference number: 4 (lower is better)
Translates to: SGPVRCYSEDRRKDVQAPGHLGK*MVWVNR
Trigger: GCGATTAACCCAAACCATCCACTTGCCCAGATGCCC...AGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 72 bp CAGAACCCTGTCTGCATAGAGGCACAAATGAAGCTCTaGTGTCCGGCAGCATCATCTGCATCATCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QNPVCIEAQMKL*CPAASSASSVV
Trigger: GACCACAGATGATGCAGATGATGCTGCCGGACACAAGAGCTTCATTTGTGCCTCTATGCAGACAGGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131217.2
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp ACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCACTGGGGTGCAGTTATATaGCCTCATGATTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TPSCRVEVLPDPSQANGHWGAVI*PHDSFC
Trigger: GCAGAAAGAATCATGAGGTCATATAACTGCACCCCA...GTGGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp CTGTTACTGCCCTATGGGAGAGAAGCACTTCAGAATATGCCTGATAGATGGAGGTATTGGACTACAAGGTaGCTCAGAGCCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: LLLPYGREALQNMPDRWRYWTTR*LRATTS
Trigger: GCTGGTGGTGGCTCTGAGTCACCTTGTAGTCCAATA...CCTCCATCTATCAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp CATGACTGGCTGGGCAAAGTAGCGGGCACTCCAGTCACAGAACCCTGTCTGCATTGTAAGCAATGCTGTTaGGGACTTTCATGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: HDWLGKVAGTPVTEPCLHCKQCC*GLSWLN
Trigger: ATTTAGCCATGAAAGTCCTCAACAGCATTGCTTACA...ATGCAGACAGGGTTCTGTGACTGGAGTGCCCGCTACTTTGCCCAGCCAGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131217.2
CDS-3UTR TCA 90 bp CCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCAAATCAGCAAAATTCTTCCTGGGGCCGACTGTGTaGGAGAGGATGTGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: PCHAVTISGFFSKSAKFFLGPTV*ERMCQG
Trigger: TCCTTGACACATCCTCTCTCACACAGTCGGCCCCAG...GAAGAATTTTGCTGATTTGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR GCA 90 bp ATCAGGGCCTTTGTCAAACATCTTTCGTGTTCGAGGGAACTGGTGGGAGTGAGGACGCTGCCAACTGGATaGAGTTTTTCATTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IRAFVKHLSCSRELVGVRTLPTG*SFSLRE
Trigger: CTCCCTCAATGAAAAACTGCATCCAGTTGGCAGCGT...CCTCACTCCCACCAGTTCCCTCGAACACGAAAGATGTTTGACAAAGGCCCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp TTTTCGTGGGCACTGTCTCTCACCCCACACCATCTTGCAGAGTCGAAGTTCTGCATTTCTAAACAAACTTaGCACGAGCAGGTCCTGTCG +
Preference number: 4 (lower is better)
Translates to: FSWALSLTPHHLAESKFCISKQT*HEQVLS
Trigger: CGACAGGACCTGCTCGTGGCAAGTTTGTTTAGAAAT...GCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGAGAGACAGTGCCCACGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp CCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGAATTTCCCACAAAGGTaGCCAGGGCAAATACAGCTG +
Preference number: 4 (lower is better)
Translates to: PVRCYSEDRRKDVQAPPQNFPQR*PGQIQL
Trigger: CAGCTGTATTTGCCCTGGGCACCTTTGTGGGAAATT...CTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp AACCTCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGAGGAGGTCCTTATCTGGGCAAGTGGATaGTTTGGGTTAATCGCAGCT +
Preference number: 4 (lower is better)
Translates to: NLRRKQGRKGPCCTEEVLIWASG*FGLIAA
Trigger: AGCTGCGATTAACCCAAACCATCCACTTGCCCAGAT...AAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATTGTGCATGCCCTTGTTaGTTGGGCTGGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNCACPC*LGWLGP
Trigger: CGGCCCCAGCCAGCCCAACCAACAAGGGCATGCACA...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp AACCTCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGAGGAGGTCCTTCATCTGCATCATCTGTaGTCTGATCAGGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: NLRRKQGRKGPCCTEEVLHLHHL*SDQGLC
Trigger: ACAAAGGCCCTGATCAGACCACAGATGATGCAGATG...AAGGACCTCCTCAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp CTGCATAGAGGCACAAATGAAGCTCTTGTGTCCGGCAGCATCATCTGCATCATCATCTGGGCAAGTGGATaGTTTGGGTTAATCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LHRGTNEALVSGSIICIIIWASG*FGLIAA
Trigger: AGCTGCGATTAACCCAAACCATCCACTTGCCCAGAT...GATGATGCAGATGATGCTGCCGGACACAAGAGCTTCATTTGTGCCTCTATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp TTGCCCTGTTGTGTAGCTGTTGACGATTACAGCAAGAATGAAGGCTGTCATGGTAATGGGCTGTGCACATaGCATGCATGTATGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LPCCVAVDDYSKNEGCHGNGLCT*HACMSG
Trigger: CCCCGACATACATGCATGCCATGTGCACAGCCCATT...ACCATGACAGCCTTCATTCTTGCTGTAATCGTCAACAGCTACACAACAGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
3UTR CAA 72 bp CGACATCTCACGGCTTTATTCTTTATTAACACTCTGTaGCTGTCACTGCTCTGGACGCCACTGCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: RHLTALFFINTL*LSLLWTPLQFR
Trigger: ACGGAACTGCAGTGGCGTCCAGAGCAGTGACAGCAACAGAGTGTTAATAAAGAATAAAGCCGTGAGATGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp TATGTTCAGCTGGCATGTATGGGTCTGCCAAGACGGATAGGAAGTACTTGTGACTGCCAGTTCTCATACTaGTTCTGTAGGTTTGCACCG +
Preference number: 4 (lower is better)
Translates to: YVQLACMGLPRRIGSTCDCQFSY*FCRFAP
Trigger: CGGTGCAAACCTACAGAAGCAGTATGAGAACTGGCA...GTCACAAGTACTTCCTATCCGTCTTGGCAGACCCATACATGCCAGCTGAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR GCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATCCTGGTGCATGTGCATaGCCTTGTTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNPGACA*PCWLGW
Trigger: CCAGCCCAACCAACAAGGGCATGCACATGCACCAGG...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATACAGGCGATCAGGTTTaGCTGGGGGTGGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNTGDQV*LGVDVQ
Trigger: CTGGACATCCACCCCCAGGCAAACCTGATCGCCTGT...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CCA 90 bp GGCGCTGTCTGCTCTGTAACTAATGCTTTGATCACATGGAAAAATCAAATGTGTGGAGGCAAGGGCATCTaGGCAAGTGGATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GAVCSVTNALITWKNQMCGGKGI*ASGWFG
Trigger: CCCAAACCATCCACTTGCCCAGATGCCCTTGCCTCC...ACACATTTGATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
3UTR CAA 72 bp AGAGAAATGCGCTCTAGGTCAGCGCTCTCTCGAGCTTaGCTTAGCTTCATGATTGAATTTCCGCATCAGACT +
Preference number: 4 (lower is better)
Translates to: REMRSRSALSRA*LSFMIEFPHQT
Trigger: AGTCTGATGCGGAAATTCAATCATGAAGCTAAGCAAAGCTCGAGAGAGCGCTGACCTAGAGCGCATTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATGCTGCTCCAGACAGATaGCAATCAGGTTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNAAPDR*QSGFPG
Trigger: TCCAGGGAAACCTGATTGCCATCTGTCTGGAGCAGC...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATAGCAAGGAACAGTCCTaGCCATTCAGGTACTCCATG +
Preference number: 4 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNSKEQS*PFRYSM
Trigger: CATGGAGTACCTGAATGGTCAGGACTGTTCCTTGCT...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
3UTR CAA 72 bp AAATGCTTTTCAAAACATCATTGTGTTGTGTCCTGTTaGTGTGCAACTGCTCTGCAATGCTGGGTCCATCCA +
Preference number: 4 (lower is better)
Translates to: KCFSKHHCVVSC*CATALQCWVHP
Trigger: TGGATGGACCCAGCATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR TCA 90 bp GGCGCTGTCTGCTCTGTAACTAATGCTTTGATCACATGGAAAAATCAAATGTGTCGATTACAGCAAGAATaGAGGCTGTCATGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GAVCSVTNALITWKNQMCRLQQE*RLSWSY
Trigger: ATAGGACCATGACAGCCTTCATTCTTGCTGTAATCG...ACACATTTGATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR GCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATGGATCAGCAGCCAGATaGAGTAAGACTCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNGSAAR*SKTLQI
Trigger: AATTTGGAGAGTCTTACTGCATCTGGCTGCTGATCC...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR TCA 90 bp GCTTTTCAAAACATCATTGTGTTGTGTCCTGTTTGTGTGCAACTGCTCTGCAATTGTAAGCAATGCTGTTaGGGACTTTCATGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: AFQNIIVLCPVCVQLLCNCKQCC*GLSWLN
Trigger: ATTTAGCCATGAAAGTCCTCAACAGCATTGCTTACA...ATTGCAGAGCAGTTGCACACAAACAGGACACAACACAATGATGTTTTGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
3UTR CAA 72 bp ATTCTACAGGGCGCTGTCTGCTCTGTAACTAATGCTTaGATCACATGGAAAAATCAAATGTGTCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: ILQGAVCSVTNA*ITWKNQMCPFV
Trigger: TACAAAGGGACACATTTGATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCCCTGTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS TCA 90 bp CGTTCTCAGGGCTCCCCAAGGTGCTGCTGGCACTGCTGCTGGTGCTaGGGTTCCCGGGAGAGAAGGCCACTGAGCTGCCCGCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RSQGSPRCCWHCCWC*GSRERRPLSCPLWL
Trigger: CAGCCACAGCGGGCAGCTCAGTGGCCTTCTCTCCCGGGAACCTCAGCACCAGCAGCAGTGCCAGCAGCACCTTGGGGAGCCCTGAGAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CAA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCCTGGAGGCAGGCCTCTaGCCCTGTTGTGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGLEAGL*PCCVAV
Trigger: AACAGCTACACAACAGGGCAAGAGGCCTGCCTCCAG...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp GCAGGCAGGGTACCTACCAGGCGATCAGGTTTGCCTGGGGGTGGATGTCCAGGGCGGCTGACAGTCTGCTaGGCCACATCATTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: AGRVPTRRSGLPGGGCPGRLTVC*ATSLVR
Trigger: CCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCG...CCCTGGACATCCACCCCCAGGCAAACCTGATCGCCTGGTAGGTACCCTGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CAA 90 bp TGCACTGAGGAGGTCCTTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCACAGGCGATCAGGTTaGCCTGGGGGTGGATGTCCA +
Preference number: 5 (lower is better)
Translates to: CTEEVLGAWVLVLDGKPGHRRSG*PGGGCP
Trigger: TGGACATCCACCCCCAGGCAAACCTGATCGCCTGTG...GCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS CCA 90 bp AGCAATCTTGATGGGAGTGGTGAGGCAGGATGTGAACAGGTCGGCTaGGAGGTCAGGGATCATGGGCAGCAGCTCGTGTGCCTCACACGC +
Preference number: 5 (lower is better)
Translates to: SNLDGSGEAGCEQVG*EVRDHGQQLVCLTR
Trigger: GCGTGTGAGGCACACGAGCTGCTGCCCATGATCCCTGACCTCCCAGCCGACCTGTTCACATCCTGCCTCACCACTCCCATCAAGATTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp CCCACCCGGTTGGGAGAATGCATTTCCAGGGGCCGTGCCAGGGTCTCCTGTTCTGCTTGTACCGAGCCCTaGGCTGCCAGTTCTCATACT +
Preference number: 5 (lower is better)
Translates to: PTRLGECISRGRARVSCSACTEP*AASSHT
Trigger: AGTATGAGAACTGGCAGCCAAGGGCTCGGTACAAGC...AGAACAGGAGACCCTGGCACGGCCCCTGGAAATGCATTCTCCCAACCGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GCTCACTTGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTAGCTTTCCTCATACTCACACGCCGCATCTaGTCGATGGTCTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: AHLRAPARLDLRGLAFLILTRRI*SMVSKD
Trigger: GTCCTTCGAGACCATCGACAAGATGCGGCGTGTGAG...TATGAGGAAAGCTAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp GCTCACTTGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTAGCTTTCCTCATATGCTTGGCCACATCATaGGTCAGGCTGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AHLRAPARLDLRGLAFLICLATS*VRLQLL
Trigger: CAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCA...TATGAGGAAAGCTAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS CCA 90 bp TGTGGGTCGCTGAGCTGCTCCAGACAGATGGCAATCAGGTTTCCCTaGAGGCAGGCCTCTGGCATGTATGGGTCTGCCAAGACGGATAGG +
Preference number: 5 (lower is better)
Translates to: CGSLSCSRQMAIRFP*RQASGMYGSAKTDR
Trigger: CCTATCCGTCTTGGCAGACCCATACATGCCAGAGGCCTGCCTCCAGGGAAACCTGATTGCCATCTGTCTGGAGCAGCTCAGCGACCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124401.2
CDS-3UTR CAA 90 bp ACAGGTCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCAGCGCAGAGCAATCTaGATGGGAGTGGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TGPLNTAQGPSLCHRCPNQRRAI*MGVVRQ
Trigger: CTGCCTCACCACTCCCATCAAGATTGCTCTGCGCTG...GTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp CGATCAGGTTTGCCTGGGGGTGGATGTCCAGGGCTGTCAGCCCCTTCACAATCTCTCACACGCCGCATCTaGTCGATGGTCTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RSGLPGGGCPGLSAPSQSLTRRI*SMVSKD
Trigger: GTCCTTCGAGACCATCGACAAGATGCGGCGTGTGAG...AGATTGTGAAGGGGCTGACAGCCCTGGACATCCACCCCCAGGCAAACCTGATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CAA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCCGGCTGACAGTCTGCTaGGCCACATCATTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: VYLCVAQAGDRPVATVTARLTVC*ATSLVR
Trigger: CCTGACCAATGATGTGGCCAAGCAGACTGTCAGCCG...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp CAGGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACGCTTGTACCGAGCCCTaGGCTGCCAGTTCTCATACT +
Preference number: 5 (lower is better)
Translates to: QGLLFCLPRTAQPVGSSHACTEP*AASSHT
Trigger: AGTATGAGAACTGGCAGCCAAGGGCTCGGTACAAGC...GTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GCCTGCTTCCTGACTCGAGTGTTCCTCAGGAACCGCCACTCACGCTCCTTGCGGGGATGCAGTTTTTCATaGAGGGAGGCAAGGGCATCT +
Preference number: 5 (lower is better)
Translates to: ACFLTRVFLRNRHSRSLRGCSFS*REARAS
Trigger: AGATGCCCTTGCCTCCCTCAATGAAAAACTGCATCC...CCGCAAGGAGCGTGAGTGGCGGTTCCTGAGGAACACTCGAGTCAGGAAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GGCAGTGGTCCTAGGTGCCGCTATCTGACACGCTTCTCCACCGAATACACGGAACAGCGCAGAGCAATCTaGATGGGAGTGGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GSGPRCRYLTRFSTEYTEQRRAI*MGVVRQ
Trigger: CTGCCTCACCACTCCCATCAAGATTGCTCTGCGCTG...TTCCGTGTATTCGGTGGAGAAGCGTGTCAGATAGCGGCACCTAGGACCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp TGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAGCCCCACAGCATCATGGCCACATaGTGGTCAATGGTGGTAGAG +
Preference number: 5 (lower is better)
Translates to: CRHTALWPNQGAGFLEPHSIMAT*WSMVVE
Trigger: CTCTACCACCATTGACCACAATGTGGCCATGATGCT...GTGGGGCTCAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp CATGACTGGCTGGGCAAAGTAGCGGGCACTCCAGTCACAGAACCCTGTCTGCATCTCACACGCCGCATCTaGTCGATGGTCTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: HDWLGKVAGTPVTEPCLHLTRRI*SMVSKD
Trigger: GTCCTTCGAGACCATCGACAAGATGCGGCGTGTGAG...ATGCAGACAGGGTTCTGTGACTGGAGTGCCCGCTACTTTGCCCAGCCAGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131217.2
CDS-3UTR CAA 90 bp GGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCTTCCTTGAAACAGATGCTGTCCTaGTCGGCGACAGCTATGCAT +
Preference number: 5 (lower is better)
Translates to: GLPVATLLYGPTKGLASLKQMLS*SATAMH
Trigger: ATGCATAGCTGTCGCCGACAAGGACAGCATCTGTTT...CAAGGAAGCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS GCA 90 bp GGATCATGGGCAGCAGCTCGTGTGCCTCACACGCTGCCAACTGGATaGAGTTTTTCATTGAGGGAGGCAAGGGCATCTGGGCAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: GSWAAARVPHTLPTG*SFSLREARASGQVD
Trigger: ATCCACTTGCCCAGATGCCCTTGCCTCCCTCAATGAAAAACTGCATCCAGTTGGCAGCGTGTGAGGCACACGAGCTGCTGCCCATGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 90 bp TCAGGGATCATGGGCAGCAGCTCGTGTGCCTCACACGCTGCCAACTaGATGCAGTTTTTCATTGAGGGAGGCAAGGGCATCTGGGCAAGT +
Preference number: 5 (lower is better)
Translates to: SGIMGSSSCASHAAN*MQFFIEGGKGIWAS
Trigger: ACTTGCCCAGATGCCCTTGCCTCCCTCAATGAAAAACTGCATCCAGTTGGCAGCGTGTGAGGCACACGAGCTGCTGCCCATGATCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp TCCACTGAACACAGCACAGGGACCCAGCCTCTGCCACAGATGTCCCAACCCGTGACTGCTTCTGTAGGTTaGCACCGATGGTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: STEHSTGTQPLPQMSQPVTASVG*HRWFPE
Trigger: CTCTGGAAACCATCGGTGCAAACCTACAGAAGCAGT...CACGGGTTGGGACATCTGTGGCAGAGGCTGGGTCCCTGTGCTGTGTTCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp CAGGGTCTCCTGTTCTGCTTGCCCAGGACAGCTCAGCCTGTAGGATCCTCTCACCTGTCGGAAAAGCTTTaGGAAGAGATCCCGAGGGAG +
Preference number: 5 (lower is better)
Translates to: QGLLFCLPRTAQPVGSSHLSEKL*EEIPRE
Trigger: CTCCCTCGGGATCTCTTCCAAAAGCTTTTCCGACAG...GTGAGAGGATCCTACAGGCTGAGCTGTCCTGGGCAAGCAGAACAGGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GCTGTCAGCCCCTTCACAATCTGCATTACATTCACAGACTCGGGCATCCGAGGGTGCTTGGCCACATCATaGGTCAGGCTGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AVSPFTICITFTDSGIRGCLATS*VRLQLL
Trigger: CAGCAGCTGCAGCCTGACCAATGATGTGGCCAAGCA...CCCTCGGATGCCCGAGTCTGTGAATGTAATGCAGATTGTGAAGGGGCTGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CAA 90 bp TGCACTGAGGAGGTCCTTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCGTAAAGGGATGGAATTaGACCACAGAAGGAACGCCG +
Preference number: 5 (lower is better)
Translates to: CTEEVLGAWVLVLDGKPGVKGWN*TTEGTP
Trigger: CGGCGTTCCTTCTGTGGTCAAATTCCATCCCTTTAC...GCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAAGGACCTCCTCAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS GCA 90 bp CTGTTTTCCACACCCATTGTGAGCCACACCTGGAATGCTGTCAGCTaGTCGGCAAAGAATGGGCTGTGCCTGAAGGCAGTACCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: LFSTPIVSHTWNAVS*SAKNGLCLKAVPSS
Trigger: CGAAGAGGGTACTGCCTTCAGGCACAGCCCATTCTTTGCCGAGCAGCTGACAGCATTCCAGGTGTGGCTCACAATGGGTGTGGAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp GCTCACTTGAGGGCGCCCGCCAGGCTGGACCTCAGAGGTCTAGCTTTCCTCATAAACTGTTTGAAGGACTaGACGATGAGGCCAGCATTG +
Preference number: 5 (lower is better)
Translates to: AHLRAPARLDLRGLAFLINCLKD*TMRPAL
Trigger: CAATGCTGGCCTCATCGTCAAGTCCTTCAAACAGTT...TATGAGGAAAGCTAGACCTCTGAGGTCCAGCCTGGCGGGCGCCCTCAAGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp ACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCAGGGGTGGATGCAGTTTTTCATaGAGGGAGGCAAGGGCATCT +
Preference number: 5 (lower is better)
Translates to: TELTHTQPLKLSAELSRGGCSFS*REARAS
Trigger: AGATGCCCTTGCCTCCCTCAATGAAAAACTGCATCC...ACCCCTGCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GCTCTAGGGCCTTCCTGTCGCCACACTGCTCTATGGCCCAACCAAGGGGCTGGCAGATTCTGCAAAGATTaGTTCAGGTTCCTAGCTGTC +
Preference number: 5 (lower is better)
Translates to: ALGPSCRHTALWPNQGAGRFCKD*FRFLAV
Trigger: GACAGCTAGGAACCTGAACAAATCTTTGCAGAATCT...GCCAGCCCCTTGGTTGGGCCATAGAGCAGTGTGGCGACAGGAAGGCCCTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp GTGTACCTGTGTGTGGCACAAGCAGGAGACAGGCCTGTGGCCACTGTTACTGCCGAGAAGGCCAGTTTCTaGTTCCCAGTCTACCACCAT +
Preference number: 5 (lower is better)
Translates to: VYLCVAQAGDRPVATVTAEKASF*FPVYHH
Trigger: ATGGTGGTAGACTGGGAACAAGAAACTGGCCTTCTC...GGCAGTAACAGTGGCCACAGGCCTGTCTCCTGCTTGTGCCACACACAGGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS TCA 90 bp GCCTCTGGCATGTATGGGTCTGCCAAGACGGATAGGAAGTACTTGTaGCCGTTGTCCTTCACGAGGTCAGCTTGGCACGAACTGTCGACA +
Preference number: 5 (lower is better)
Translates to: ASGMYGSAKTDRKYL*PLSFTRSAWHELST
Trigger: TGTCGACAGTTCGTGCCAAGCTGACCTCGTGAAGGACAACGGTCACAAGTACTTCCTATCCGTCTTGGCAGACCCATACATGCCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124401.2
CDS-3UTR CAA 90 bp CATGACTGGCTGGGCAAAGTAGCGGGCACTCCAGTCACAGAACCCTGTCTGCATACTGCTTCTGTAGGTTaGCACCGATGGTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HDWLGKVAGTPVTEPCLHTASVG*HRWFPE
Trigger: CTCTGGAAACCATCGGTGCAAACCTACAGAAGCAGT...ATGCAGACAGGGTTCTGTGACTGGAGTGCCCGCTACTTTGCCCAGCCAGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp ATACACAATGTGCTGGACTGCCTCGGTGCTCCAGGAGGGCCAGGCTCAGACTTCTGCAGTGCAAACTGTTaGAAGGACTTGACGATGAGG +
Preference number: 5 (lower is better)
Translates to: IHNVLDCLGAPGGPGSDFCSANC*KDLTMR
Trigger: CCTCATCGTCAAGTCCTTCAAACAGTTTGCACTGCA...GAAGTCTGAGCCTGGCCCTCCTGGAGCACCGAGGCAGTCCAGCACATTGTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp CCACACCATCTTGCAGAGTCGAAGTTCTGCCAGATCCTTCCCAGGCAAATGGCCCTGTCGGAAAAGCTTTaGGAAGAGATCCCGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PHHLAESKFCQILPRQMALSEKL*EEIPRE
Trigger: CTCCCTCGGGATCTCTTCCAAAAGCTTTTCCGACAG...GGCCATTTGCCTGGGAAGGATCTGGCAGAACTTCGACTCTGCAAGATGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000139728.8
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp TTGGTGCCTGGGTGCTGGTTCTTGATGGGAAGCCAGGCCAACCCCTCCCCTGCTGCCACAGTGCAGAAATaGCTTTCATATTGGACTACA +
Preference number: 5 (lower is better)
Translates to: LVPGCWFLMGSQANPSPAATVQK*LSYWTT
Trigger: TGTAGTCCAATATGAAAGCAATTTCTGCACTGTGGC...AGCAGGGGAGGGGTTGGCCTGGCTTCCCATCAAGAACCAGCACCCAGGCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS TCA 90 bp CAGCTCGTGTGCCTCACACGCTGCCAACTGGATGCAGTTTTTCATTaGGGGAGGCAAGGGCATCTGGGCAAGTGGATGGTTTGGGTTAAT +
Preference number: 5 (lower is better)
Translates to: QLVCLTRCQLDAVFH*GRQGHLGKWMVWVN
Trigger: ATTAACCCAAACCATCCACTTGCCCAGATGCCCTTGCCTCCCTCAATGAAAAACTGCATCCAGTTGGCAGCGTGTGAGGCACACGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS TCA 90 bp TCCGGTCATTCAGCCGGCCAGGGATCTTTTCTATCAAATCCAGTGTaGCTCCAGGCACCAGACTCACGCACTTCTGCATGCAAAACCAGC +
Preference number: 5 (lower is better)
Translates to: SGHSAGQGSFLSNPV*LQAPDSRTSACKTS
Trigger: GCTGGTTTTGCATGCAGAAGTGCGTGAGTCTGGTGCCTGGAGTCACACTGGATTTGATAGAAAAGATCCCTGGCCGGCTGAATGACCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 90 bp CTTGACGATGAGGCCAGCATTGGAACAGTCGTAGACAAAGATGGATaGGCTGCCCATCCACGTCTGCAGGTCGTATATGGACAGAGGGAT +
Preference number: 5 (lower is better)
Translates to: LDDEASIGTVVDKDG*AAHPRLQVVYGQRD
Trigger: ATCCCTCTGTCCATATACGACCTGCAGACGTGGATGGGCAGCCCATCCATCTTTGTCTACGACTGTTCCAATGCTGGCCTCATCGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GGATGGGGTCAGAGAGGAGGCTATAGAGCTTTTCGTGGGCACTGTCTCTCACCCTGCAGTGCAAACTGTTaGAAGGACTTGACGATGAGG +
Preference number: 5 (lower is better)
Translates to: GWGQRGGYRAFRGHCLSPCSANC*KDLTMR
Trigger: CCTCATCGTCAAGTCCTTCAAACAGTTTGCACTGCA...GGGTGAGAGACAGTGCCCACGAAAAGCTCTATAGCCTCCTCTCTGACCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS TCA 90 bp TCATACTGCTTCTGTAGGTTTGCACCGATGGTTTCCAGAGCTTTCTaGGGGCCCATAGACAGAGGATCGATCCAGCATTCCAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: SYCFCRFAPMVSRAF*GPIDRGSIQHSSRA
Trigger: TGCTCGGCTGGAATGCTGGATCGATCCTCTGTCTATGGGCCCTCAGAAAGCTCTGGAAACCATCGGTGCAAACCTACAGAAGCAGTATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 90 bp ATGCAGTTTTTCATTGAGGGAGGCAAGGGCATCTGGGCAAGTGGATaGTTTGGGTTAATCGCAGCTACCTCTAGTTCCTGCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: MQFFIEGGKGIWASG*FGLIAATSSSCSLC
Trigger: GCAGAGGGAGCAGGAACTAGAGGTAGCTGCGATTAACCCAAACCATCCACTTGCCCAGATGCCCTTGCCTCCCTCAATGAAAAACTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp AACGGTGCGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGAAACTGTTTGAAGGACTaGACGATGAGGCCAGCATTG +
Preference number: 5 (lower is better)
Translates to: NGANHKTDLSHSCQHPWGNCLKD*TMRPAL
Trigger: CAATGCTGGCCTCATCGTCAAGTCCTTCAAACAGTT...TCCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GAAGCATGTCTGAGAGCCCTTGCCACGCAGTCACCATCTCTGGATTCTTTTCCACTGTCGGAAAAGCTTTaGGAAGAGATCCCGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EACLRALATQSPSLDSFPLSEKL*EEIPRE
Trigger: CTCCCTCGGGATCTCTTCCAAAAGCTTTTCCGACAG...TGGAAAAGAATCCAGAGATGGTGACTGCGTGGCAAGGGCTCTCAGACATGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp CTGTTACTGCCCTATGGGAGAGAAGCACTTCAGAATATGCCTGATAGATGGAGGCTTCACGAGGTCAGCTaGGCACGAACTGTCGACAGC +
Preference number: 5 (lower is better)
Translates to: LLLPYGREALQNMPDRWRLHEVS*ARTVDS
Trigger: GCTGTCGACAGTTCGTGCCAAGCTGACCTCGTGAAG...CCTCCATCTATCAGGCATATTCTGAAGTGCTTCTCTCCCATAGGGCAGTAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS GCA 90 bp TGGGCAAGTGGATGGTTTGGGTTAATCGCAGCTACCTCTAGTTCCTaGTCCCTCTGCAGTGCAAACTGTTTGAAGGACTTGACGATGAGG +
Preference number: 5 (lower is better)
Translates to: WASGWFGLIAATSSS*SLCSANCLKDLTMR
Trigger: CCTCATCGTCAAGTCCTTCAAACAGTTTGCACTGCAGAGGGAGCAGGAACTAGAGGTAGCTGCGATTAACCCAAACCATCCACTTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp TCTGGACCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTTCGACAGCGAGGATTTaGGCCCAGATGAAGACAAGG +
Preference number: 5 (lower is better)
Translates to: SGPVRCYSEDRRKDVQAPSTARI*AQMKTR
Trigger: CCTTGTCTTCATCTGGGCCAAAATCCTCGCTGTCGA...AGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp TCCCTTTGTAAAACCTCAGAAGAAAACAGGGCAGGAAAGGACCATGCTGCACTGTCACCCCACACCATCTaGCAGAGTCGAAGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLCKTSEENRAGKDHAALSPHTI*QSRSSA
Trigger: GGCAGAACTTCGACTCTGCAAGATGGTGTGGGGTGA...CAGTGCAGCATGGTCCTTTCCTGCCCTGTTTTCTTCTGAGGTTTTACAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp ACTGAGCTGACGCACACTCAGCCCCTGAAGCTCTCTGCAGAACTGAGCAGGGGTGAAATTGCTTTCATATaGGACTACAAGGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: TELTHTQPLKLSAELSRGEIAFI*DYKVTQ
Trigger: CTGAGTCACCTTGTAGTCCAATATGAAAGCAATTTC...ACCCCTGCTCAGTTCTGCAGAGAGCTTCAGGGGCTGAGTGTGCGTCAGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS-3UTR CAA 90 bp GAACGGTGCGAATCACAAGACAGACTTGTCACACAGCTGTCAGCACCCGTGGGGGCCACAGTGCAGAAATaGCTTTCATATTGGACTACA +
Preference number: 5 (lower is better)
Translates to: ERCESQDRLVTQLSAPVGATVQK*LSYWTT
Trigger: TGTAGTCCAATATGAAAGCAATTTCTGCACTGTGGC...CCCCACGGGTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATTCGCACCGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CAA 90 bp GTGGGGTGGCCTCTGCCATCTGGAAGGAGCTTGAATAGTGCTAAGGAGAGGGGAGAAATTGCTTTCATATaGGACTACAAGGTGACTCAG +
Preference number: 5 (lower is better)
Translates to: VGWPLPSGRSLNSAKERGEIAFI*DYKVTQ
Trigger: CTGAGTCACCTTGTAGTCCAATATGAAAGCAATTTC...TCCCCTCTCCTTAGCACTATTCAAGCTCCTTCCAGATGGCAGAGGCCACCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS-3UTR CAA 90 bp CCTGTACGCTGTTATAGTGAAGACAGAAGGAAGGATGTGCAAGCCCCTCCTCAGGATGTGCAAAGTTTCTaGACTTCATCCACAGTAGGG +
Preference number: 5 (lower is better)
Translates to: PVRCYSEDRRKDVQAPPQDVQSF*TSSTVG
Trigger: CCCTACTGTGGATGAAGTCAAGAAACTTTGCACATC...CTGAGGAGGGGCTTGCACATCCTTCCTTCTGTCTTCACTATAACAGCGTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 90 bp AAGGCCACACTCACCGTCTTCATCCGATCCTTCATTCTCCAGCTCTaGGCTAAAGATTTGGAGCCTTCGATTTTCTCACAATGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: KATLTVFIRSFILQL*AKDLEPSIFSQCLF
Trigger: GAAAAGACATTGTGAGAAAATCGAAGGCTCCAAATCTTTAGCGCAGAGCTGGAGAATGAAGGATCGGATGAAGACGGTGAGTGTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS-3UTR CAA 90 bp GGCGCTGTCTGCTCTGTAACTAATGCTTTGATCACATGGAAAAATCAAATGTGTAATCACAAGACAGACTaGTCACACAGCTGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: GAVCSVTNALITWKNQMCNHKTD*SHSCQH
Trigger: GTGCTGACAGCTGTGTGACAAGTCTGTCTTGTGATT...ACACATTTGATTTTTCCATGTGATCAAAGCATTAGTTACAGAGCAGACAGCGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS CCA 72 bp GATGGGAGTGGTGAGGCAGGATGTGAACAGGTCGGCTaGGAGGTCAGGGATCATGGGCAGCAGCTCGTGTGC +
Preference number: 6 (lower is better)
Translates to: DGSGEAGCEQVG*EVRDHGQQLVC
Trigger: GCACACGAGCTGCTGCCCATGATCCCTGACCTCCCAGCCGACCTGTTCACATCCTGCCTCACCACTCCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 72 bp GCAGCAGCTCGTGTGCCTCACACGCTGCCAACTGGATaGAGTTTTTCATTGAGGGAGGCAAGGGCATCTGGG +
Preference number: 6 (lower is better)
Translates to: AAARVPHTLPTG*SFSLREARASG
Trigger: CCCAGATGCCCTTGCCTCCCTCAATGAAAAACTGCATCCAGTTGGCAGCGTGTGAGGCACACGAGCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 72 bp GGCTGGGAGGTCAGGGATCATGGGCAGCAGCTCGTGTaGCTCACACGCTGCCAACTGGATGCAGTTTTTCAT +
Preference number: 6 (lower is better)
Translates to: GWEVRDHGQQLV*LTRCQLDAVFH
Trigger: ATGAAAAACTGCATCCAGTTGGCAGCGTGTGAGGCACACGAGCTGCTGCCCATGATCCCTGACCTCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 72 bp GAGGATCGATCCAGCATTCCAGCCGAGCACAGGGTGTaGTCTTCACCACATCCGGAGGATCCACACCCACAT +
Preference number: 6 (lower is better)
Translates to: EDRSSIPAEHRV*SSPHPEDPHPH
Trigger: ATGTGGGTGTGGATCCTCCGGATGTGGTGAAGACCACACCCTGTGCTCGGCTGGAATGCTGGATCGATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 72 bp CTGAGCTGCTCCAGACAGATGGCAATCAGGTTTCCCTaGAGGCAGGCCTCTGGCATGTATGGGTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: LSCSRQMAIRFP*RQASGMYGSAK
Trigger: CTTGGCAGACCCATACATGCCAGAGGCCTGCCTCCAGGGAAACCTGATTGCCATCTGTCTGGAGCAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124401.2
CDS CAA 90 bp ACCCGTTCCTCCTTGGCGTTCCGGCGCAGAGATGTGCAAAGTTTCTaGACTTCATCCACAGTAGGGTCGAGGCTCTGCTTGTACCGAGCC +
Preference number: 6 (lower is better)
Translates to: TRSSLAFRRRDVQSF*TSSTVGSRLCLYRA
Trigger: GGCTCGGTACAAGCAGAGCCTCGACCCTACTGTGGATGAAGTCAAGAAACTTTGCACATCTCTGCGCCGGAACGCCAAGGAGGAACGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 72 bp GGGCTCCTGTTTTCCACACCCATTGTGAGCCACACCTaGAATGCTGTCAGCTGCTCGGCAAAGAATGGGCTG +
Preference number: 6 (lower is better)
Translates to: GLLFSTPIVSHT*NAVSCSAKNGL
Trigger: CAGCCCATTCTTTGCCGAGCAGCTGACAGCATTCCAGGTGTGGCTCACAATGGGTGTGGAAAACAGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS GCA 72 bp TGGAATGCTGTCAGCTGCTCGGCAAAGAATGGGCTGTaGCTGAAGGCAGTACCCTCTTCGATGATGGTTGGC +
Preference number: 6 (lower is better)
Translates to: WNAVSCSAKNGL*LKAVPSSMMVG
Trigger: GCCAACCATCATCGAAGAGGGTACTGCCTTCAGGCACAGCCCATTCTTTGCCGAGCAGCTGACAGCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS GCA 72 bp ACACCCATTGTGAGCCACACCTGGAATGCTGTCAGCTaGTCGGCAAAGAATGGGCTGTGCCTGAAGGCAGTA +
Preference number: 6 (lower is better)
Translates to: TPIVSHTWNAVS*SAKNGLCLKAV
Trigger: TACTGCCTTCAGGCACAGCCCATTCTTTGCCGAGCAGCTGACAGCATTCCAGGTGTGGCTCACAATGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS CCA 72 bp GCTGTGCCTGAAGGCAGTACCCTCTTCGATGATGGTTaGCAGCTGAGAGAGGCAAATGTCCACAGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: AVPEGSTLFDDG*QLREANVHSKV
Trigger: GACCTTGCTGTGGACATTTGCCTCTCTCAGCTGCCAACCATCATCGAAGAGGGTACTGCCTTCAGGCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026671.13
CDS TCA 72 bp TGCCTCACACGCTGCCAACTGGATGCAGTTTTTCATTaGGGGAGGCAAGGGCATCTGGGCAAGTGGATGGTT +
Preference number: 6 (lower is better)
Translates to: CLTRCQLDAVFH*GRQGHLGKWMV
Trigger: AACCATCCACTTGCCCAGATGCCCTTGCCTCCCTCAATGAAAAACTGCATCCAGTTGGCAGCGTGTGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS TCA 72 bp TCAGCCGGCCAGGGATCTTTTCTATCAAATCCAGTGTaGCTCCAGGCACCAGACTCACGCACTTCTGCATGC +
Preference number: 6 (lower is better)
Translates to: SAGQGSFLSNPV*LQAPDSRTSAC
Trigger: GCATGCAGAAGTGCGTGAGTCTGGTGCCTGGAGTCACACTGGATTTGATAGAAAAGATCCCTGGCCGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 72 bp TCCAGTGTGACTCCAGGCACCAGACTCACGCACTTCTaGATGCAAAACCAGCGCAGAGCAATCTTGATGGGA +
Preference number: 6 (lower is better)
Translates to: SSVTPGTRLTHF*MQNQRRAILMG
Trigger: TCCCATCAAGATTGCTCTGCGCTGGTTTTGCATGCAGAAGTGCGTGAGTCTGGTGCCTGGAGTCACACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 72 bp GAGGCCAGCATTGGAACAGTCGTAGACAAAGATGGATaGGCTGCCCATCCACGTCTGCAGGTCGTATATGGA +
Preference number: 6 (lower is better)
Translates to: EASIGTVVDKDG*AAHPRLQVVYG
Trigger: TCCATATACGACCTGCAGACGTGGATGGGCAGCCCATCCATCTTTGTCTACGACTGTTCCAATGCTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CAA 72 bp CCCTTGGCTGCCAGTTCTCATACTGCTTCTGTAGGTTaGCACCGATGGTTTCCAGAGCTTTCTGAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PLAASSHTASVG*HRWFPELSEGP
Trigger: TGGGCCCTCAGAAAGCTCTGGAAACCATCGGTGCAAACCTACAGAAGCAGTATGAGAACTGGCAGCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CAA 72 bp TCCTTGGCGTTCCGGCGCAGAGATGTGCAAAGTTTCTaGACTTCATCCACAGTAGGGTCGAGGCTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SLAFRRRDVQSF*TSSTVGSRLCL
Trigger: CAAGCAGAGCCTCGACCCTACTGTGGATGAAGTCAAGAAACTTTGCACATCTCTGCGCCGGAACGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CAA 72 bp ACGCACTTCTGCATGCAAAACCAGCGCAGAGCAATCTaGATGGGAGTGGTGAGGCAGGATGTGAACAGGTCG +
Preference number: 6 (lower is better)
Translates to: THFCMQNQRRAI*MGVVRQDVNRS
Trigger: CGACCTGTTCACATCCTGCCTCACCACTCCCATCAAGATTGCTCTGCGCTGGTTTTGCATGCAGAAGTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 72 bp TGCTTGTACCGAGCCCTTGGCTGCCAGTTCTCATACTaGTTCTGTAGGTTTGCACCGATGGTTTCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: CLYRALGCQFSY*FCRFAPMVSRA
Trigger: AGCTCTGGAAACCATCGGTGCAAACCTACAGAAGCAGTATGAGAACTGGCAGCCAAGGGCTCGGTACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 72 bp AGTTTCTTGACTTCATCCACAGTAGGGTCGAGGCTCTaGTTGTACCGAGCCCTTGGCTGCCAGTTCTCATAC +
Preference number: 6 (lower is better)
Translates to: SFLTSSTVGSRL*LYRALGCQFSY
Trigger: GTATGAGAACTGGCAGCCAAGGGCTCGGTACAAGCAGAGCCTCGACCCTACTGTGGATGAAGTCAAGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 72 bp CAGCATTGGAACAGTCGTAGACAAAGATGGATGGGCTaGCCATCCACGTCTGCAGGTCGTATATGGACAGAG +
Preference number: 6 (lower is better)
Translates to: QHWNSRRQRWMG*PSTSAGRIWTE
Trigger: CTCTGTCCATATACGACCTGCAGACGTGGATGGGCAGCCCATCCATCTTTGTCTACGACTGTTCCAATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 72 bp TTCATTGAGGGAGGCAAGGGCATCTGGGCAAGTGGATaGTTTGGGTTAATCGCAGCTACCTCTAGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: FIEGGKGIWASG*FGLIAATSSSC
Trigger: GCAGGAACTAGAGGTAGCTGCGATTAACCCAAACCATCCACTTGCCCAGATGCCCTTGCCTCCCTCAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS TCA 72 bp TTCTGTAGGTTTGCACCGATGGTTTCCAGAGCTTTCTaGGGGCCCATAGACAGAGGATCGATCCAGCATTCC +
Preference number: 6 (lower is better)
Translates to: FCRFAPMVSRAF*GPIDRGSIQHS
Trigger: GGAATGCTGGATCGATCCTCTGTCTATGGGCCCTCAGAAAGCTCTGGAAACCATCGGTGCAAACCTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CAA 72 bp ACCTCTAGTTCCTGCTCCCTCTGCAGTGCAAACTGTTaGAAGGACTTGACGATGAGGCCAGCATTGGAACAG +
Preference number: 6 (lower is better)
Translates to: TSSSCSLCSANC*KDLTMRPALEQ
Trigger: CTGTTCCAATGCTGGCCTCATCGTCAAGTCCTTCAAACAGTTTGCACTGCAGAGGGAGCAGGAACTAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS GCA 72 bp GGATGGTTTGGGTTAATCGCAGCTACCTCTAGTTCCTaGTCCCTCTGCAGTGCAAACTGTTTGAAGGACTTG +
Preference number: 6 (lower is better)
Translates to: GWFGLIAATSSS*SLCSANCLKDL
Trigger: CAAGTCCTTCAAACAGTTTGCACTGCAGAGGGAGCAGGAACTAGAGGTAGCTGCGATTAACCCAAACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CAA 72 bp CAGAACCCTGTCTGCATAGAGGCACAAATGAAGCTCTaGTGTCCGGCAGCATCATCTGCATCATCTGATCAG +
Preference number: 6 (lower is better)
Translates to: QNPVCIEAQMKL*CPAASSASSDQ
Trigger: CTGATCAGATGATGCAGATGATGCTGCCGGACACAAGAGCTTCATTTGTGCCTCTATGCAGACAGGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136662.8
CDS GCA 72 bp CTCACCGTCTTCATCCGATCCTTCATTCTCCAGCTCTaGGCTAAAGATTTGGAGCCTTCGATTTTCTCACAA +
Preference number: 6 (lower is better)
Translates to: LTVFIRSFILQL*AKDLEPSIFSQ
Trigger: TTGTGAGAAAATCGAAGGCTCCAAATCTTTAGCGCAGAGCTGGAGAATGAAGGATCGGATGAAGACGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CCA 72 bp TCCGATCCTTCATTCTCCAGCTCTGCGCTAAAGATTTaGAGCCTTCGATTTTCTCACAATGTCTTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: SDPSFSSSALKI*SLRFSHNVFSS
Trigger: TGAAGAAAAGACATTGTGAGAAAATCGAAGGCTCCAAATCTTTAGCGCAGAGCTGGAGAATGAAGGATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8
CDS CAA 72 bp ATCCGATCCTTCATTCTCCAGCTCTGCGCTAAAGATTaGGAGCCTTCGATTTTCTCACAATGTCTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: IRSFILQLCAKD*EPSIFSQCLFF
Trigger: GAAGAAAAGACATTGTGAGAAAATCGAAGGCTCCAAATCTTTAGCGCAGAGCTGGAGAATGAAGGATCGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000026671.13
ENSMUST00000147781.8