Pregenerated sensors for RPTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041984Ensembl transcript IDs: ENSMUST00000045912.3
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGACTTTTCCCTGTTTCTaGATTTCAGGGAGAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: ASEMLISENLSLISSSPRTFPCF*ISGRVL Trigger: GAGCACTCTCCCTGAAATTCAGAAACAGGGAAAAGT...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTCAGGGAGAGTGCTCTaGCATTCAGTGATTCAACCA | + |
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Preference number: 2 (lower is better) Translates to: RKRSLGIRDANIRESLLDSGRVL*HSVIQP Trigger: TGGTTGAATCACTGAATGGCAGAGCACTCTCCCTGA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| 3UTR-3UTR TCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCAGAGAATCTCTCCTTaGTCTCTAGCTCCCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDQRISP*SLAPLG Trigger: CCCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTCTTTAGCTTCAAACTaGTTTAATCTTGATGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RKRSLGIRDANIRESLLDSLASN*FNLDAH Trigger: GTGAGCATCAAGATTAAAGCAGTTTGAAGCTAAAGA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGTCTGTCTGGCCCTGGTaGGAACTCAGGCCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRSVWPW*ELRPCP Trigger: TGGACAAGGCCTGAGTTCTCACCAGGGCCAGACAGA...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCAACTCTGGTCTTGCCTaGCTTTCTGACCCTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PRGFSLFHPSLDHEACGSNSGLA*LSDPGE Trigger: CTCACCAGGGTCAGAAAGGCAGGCAAGACCAGAGTT...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGTCTTCCTCCCCGCAGTaGTCCTGCTCACTGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRSSSPQ*SCSLLC Trigger: ACAGAGCAGTGAGCAGGACCACTGCGGGGAGGAAGA...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGTCTGTCTGGCCCTGGTaGGAACTTAGGCTGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRSVWPW*ELRLCP Trigger: TGGACACAGCCTAAGTTCTCACCAGGGCCAGACAGA...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCTCAGTGAGCAGCAGCTaGTTCAACTCCTTCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PRGFSLFHPSLDHEACGSSVSSS*FNSFLL Trigger: GAGCAAGAAGGAGTTGAAGCAGCTGCTGCTCACTGA...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGGACTCTGGTCATGCCTaGCTTTCTGACCCTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRDSGHA*LSDPGE Trigger: CTCACCAGGGTCAGAAAGGCAGGCATGACCAGAGTC...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTCCCCGCAGTGGTCCTaGTCACTGCTCTGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDSPQWS*SLLCDC Trigger: GCAATCACAGAGCAGTGAGCAGGACCACTGCGGGGA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCTGTCCGATGCCAGTTTaGATTCTGGCTTTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGFSLFHPSLDHEACGSCPMPV*ILALSV Trigger: GACAGACAAAGCCAGAATTCAAACTGGCATCGGACA...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCATCTTGCCTGCCTTTCTaGCCCTGGTGGGGACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DILPIRANAHQSPKSLSSSCLPF*PWWGLW Trigger: CCAGAGTCCCCACCAGGGTCAGAAAGGCAGGCAAGA...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATGCTTCAACTCCTTCTTaGTCAGTGAAGCGCCTACCC | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDASTPS*SVKRLP Trigger: GGGTAGGCGCTTCACTGAGCAAGAAGGAGTTGAAGC...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCCTGGCCTTCTCTGCCTaGCTGATCAAAATGAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PRGFSLFHPSLDHEACGSLAFSA*LIKMKT Trigger: AGTTTTCATTTTGATCAGGCAGGCAGAGAAGGCCAG...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGGTCTGCTGCTGGATTTaGTGCTCCCTTCTATCATGG | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRVCCWI*CSLLSW Trigger: CCATGATAGAAGGGAGCAGCAAATCCAGCAGCAGAC...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATGGCTTCCATGTCTGCTaGTGGATTTGCTGCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDGFHVC*WICCSL Trigger: AAGGGAGCAGCAAATCCAGCAGCAGACATGGAAGCC...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTGTCTCCAAACTCAGTaGGCAGCAGCTGCTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDCLQTQ*AAAAST Trigger: AGTTGAAGCAGCTGCTGCTCACTGAGTTTGGAGACA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCAACTCTGGTCTTTTCTaGCTTTCTGGCCATAATGGA | + |
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Preference number: 4 (lower is better) Translates to: PRGFSLFHPSLDHEACGSNSGLF*LSGHNG Trigger: TCCATTATGGCCAGAAAGGCAGAAAAGACCAGAGTT...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCAGACTCTGGTCTTGCCTaGCTTTCTGACCCCGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: DILPIRANAHQSPKSLSSDSGLA*LSDPGE Trigger: CTCACCGGGGTCAGAAAGGCAGGCAAGACCAGAGTC...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTGTTGGGGAAGCTTCTaGATTGGTCTTGGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDCWGSF*IGLGLL Trigger: AAGGAGGCCAAGACCAATCCAGAAGCTTCCCCAACA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCGCTGGTTTGGTAGGGTaGTTTCCAGATTTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PRGFSLFHPSLDHEACGSAGLVG*FPDFSL Trigger: AAGAGAAAAATCTGGAAACCACCCTACCAAACCAGC...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTCGGTCTGGCCCTGGTaGGAACTCAGGCCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDSVWPW*ELRPCP Trigger: TGGACAAGGCCTGAGTTCTCACCAGGGCCAGACCGA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGCTGCTCACTGCTCTGTaGTTGCCAATCATATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRLLTAL*LPIIFF Trigger: GAAGAATATGATTGGCAATCACAGAGCAGTGAGCAG...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCAAACTCTGGTCTTGCCTaGCTTTCTGACCCTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: DILPIRANAHQSPKSLSSNSGLA*LSDPGG Trigger: CCCACCAGGGTCAGAAAGGCAGGCAAGACCAGAGTT...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTGCTGCTGGATTTGCTaGTCCCTTCTATCATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDCCWIC*SLLSWD Trigger: ATCCCATGATAGAAGGGAGCAGCAAATCCAGCAGCA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGTTCTTCATAGGAGTATaGCTCTTGCTGTACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRFFIGV*LLLYLS Trigger: GCTCAGGTACAGCAAGAGCCATACTCCTATGAAGAA...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCATGGAAACGTCTTCCCTaGGGCCCTTCACACTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DILPIRANAHQSPKSLSSWKRLP*GPSHWS Trigger: TGACCAGTGTGAAGGGCCCCAGGGAAGACGTTTCCA...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTCTGCCTGTGCTTTCTaGAAATTTATGGCTCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDSACAF*KFMAPC Trigger: ACACGGAGCCATAAATTTTCAGAAAGCACAGGCAGA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGTCTTGTCTGCCTTTCTaGCCCTGGTGGGGACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKSCLPF*PWWGLW Trigger: CCAGAGTCCCCACCAGGGTCAGAAAGGCAGACAAGA...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTTTGTTCCTCTTCATaGGTTTGCCAGTTCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDLCSSS*VCQFCI Trigger: GATGCAGAACTGGCAAACTCATGAAGAGGAACAAAG...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCCTTGTCCCTCTGTCTaGTCATGGTATGAACTATGT | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDPCPSV*SWYELC Trigger: ACATAGTTCATACCATGAGCAGACAGAGGGACAAGG...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATAACCCTGGACTTCTCTaGCTGCCTGATCAAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDNPGLL*LPDQNE Trigger: TTCATTTTGATCAGGCAGGCAGAGAAGTCCAGGGTT...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATGGGATTTTTCTCTGTTaGGGAAGCTTCTGGATTGGT | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDGIFLC*GSFWIG Trigger: ACCAATCCAGAAGCTTCCCCAACAGAGAAAAATCCC...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGTCATACAGATTTTCCTaGTCCTCAACACTGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRSYRFS*SSTLCL Trigger: TAGACACAGTGTTGAGGATCAGGAAAATCTGTATGA...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCAGACTGACCATGACTaGTTTGTTGTCCAGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDQTDHD*FVVQMF Trigger: AAACATCTGGACAACAAAGCAGTCATGGTCAGTCTG...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATGACTCTGGTCTTTTCTaGCTTTCTGACCTTGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RKRSLGIRDANIRESLLDDSGLF*LSDLVE Trigger: TTCAACAAGGTCAGAAAGGCAGAAAAGACCAGAGTC...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGGACTCTGGTCTTGCCTaGCTTTCTGACCCTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKDSGLA*LSDPGE Trigger: CTCACCAGGGTCAGAAAGGCAGGCAAGACCAGAGTC...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCCCATGGAATGTCTCTaGCTGACCACAGTGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDPMECL*LTTVRI Trigger: GATCCTCACTGTGGTCAGTCAGAGACATTCCATGGG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGTATGTTGTCTGCCTGTaGTTTCTGAAAATTTATGGC | + |
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Preference number: 4 (lower is better) Translates to: ASEMLISENLSLISSSPRYVVCL*FLKIYG Trigger: GCCATAAATTTTCAGAAAGCACAGGCAGACAACATA...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGGACTCTGGTCTTGTCTaGCTTTCTGACCCAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKDSGLV*LSDPGE Trigger: CTCACCTGGGTCAGAAAGGCAGACAAGACCAGAGTC...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGGACTCTGGTCTTGTCTaGCTTTCTGACCCTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKDSGLV*LSDPGE Trigger: CTCACCAGGGTCAGAAAGGCAGACAAGACCAGAGTC...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTGCCAGTTTGAATTCTaGCCTTGGCTGTCGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDCQFEF*PWLSVW Trigger: CCAGACCGACAGCCAAGGCCAGAATTCAAACTGGCA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCTCCGTGTTCCTTCCTaGTCATGTTCTTTCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDLRVPS*SCSFWE Trigger: CTCCCAGAAAGAACATGATCAGGAAGGAACACGGAG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR TCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACGGCTCTTGCTGTACCTaGGCTAAGAGTTTGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDGSCCT*AKSLCW Trigger: CCAACACAAACTCTTAGCTCAGGTACAGCAAGAGCC...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTGCCTGTGTTGTCTCTaGTGGTTCTGCTCGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDCLCCL*WFCSST Trigger: TGTAGACGAGCAGAACCAGCAGAGACAACACAGGCA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGCTGTGTTGTCTCTGCTaGTTCTGCTCGTCTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKLCCLC*FCSSTW Trigger: CCATGTAGACGAGCAGAACCAGCAGAGACAACACAG...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCATTCTGCTCGTCTACATaGGTTTGCCTATCACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DILPIRANAHQSPKSLSSFCSST*VCLSLV Trigger: AACAAGTGATAGGCAAACCCATGTAGACGAGCAGAA...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCATCATCTTCACTCATGTaGGATTTTTCTCTGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DILPIRANAHQSPKSLSSSSSLM*DFSLLG Trigger: CCCCAACAGAGAAAAATCCCACATGAGTGAAGATGA...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTCTCTGTCTGACTGTTaGCTGATTTCTGATGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDSLSDC*LISDAD Trigger: GTCAGCATCAGAAATCAGGCAACAGTCAGACAGAGA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGCTAGTACTGATAGGCTaGCTGTTCTTGGACATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKLVLIG*LFLDIV Trigger: GACTATGTCCAAGAACAGGCAGCCTATCAGTACTAG...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACGGTTTCCACAGTTTCTaGATCATTTGGTCTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDGFHSF*IIWSPK Trigger: CTTCGGAGACCAAATGATCCAGAAACTGTGGAAACC...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCAGGCTTGGACCAATTaGAATACCAGCAAGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDQAWTN*NTSKRY Trigger: ATACCTCTTGCTGGTATTCCAATTGGTCCAAGCCTG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR TCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTTACTATCTAGCTTATaGTGGCAGGCTTGGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDLLSSL*WQAWTN Trigger: ATTGGTCCAAGCCTGCCATCATAAGCTAGATAGTAA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCCAAGTGTTCCAGAATaGTTTCCACAGTTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDPSVPE*FPQFLD Trigger: ATCCAGAAACTGTGGAAACCATTCTGGAACACTTGG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR TCA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTCTCTTGAATTCTGCTaGCTTAGTTTTACTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDSLEFC*LSFTDL Trigger: AAGGTCAGTAAAACTAAGTCAGCAGAATTCAAGAGA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS GCA 90 bp | GGTCATGCCTGCCTTTCTGACCCAGGTGAGGACTCTGGTCTTGCCTaGCTTTCTGACCCTGGTGAGGACTCAGGTCTTGCCTGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GHACLSDPGEDSGLA*LSDPGEDSGLACLS Trigger: AGAAAGGCAGGCAAGACCTGAGTCCTCACCAGGGTCAGAAAGGCAGGCAAGACCAGAGTCCTCACCTGGGTCAGAAAGGCAGGCATGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS TCA 90 bp | GGGTGGTTTCCAGATTTTTCTCTTCTTTGGGACTTTCCACCACCATaGGTTGGATGGAAACGTCTTCCCTGGGGCCCTTCACACTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GWFPDFSLLWDFPPP*VGWKRLPWGPSHWS Trigger: TGACCAGTGTGAAGGGCCCCAGGGAAGACGTTTCCATCCAACTCATGGTGGTGGAAAGTCCCAAAGAAGAGAAAAATCTGGAAACCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS TCA 90 bp | ATCAAAATGAAAACTCTGTCCTTGACTGTCTGTCCGATGCCAGTTTaGATTCTGGCCTTGGCTGTCGGTCTGGCCCTGGTGAGAACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IKMKTLSLTVCPMPV*ILALAVGLALVRTQ Trigger: CTGAGTTCTCACCAGGGCCAGACCGACAGCCAAGGCCAGAATTCAAACTGGCATCGGACAGACAGTCAAGGACAGAGTTTTCATTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCCTGTCCGATGCCAGTTaGAATTCTGGCCTTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRGFSLFHPSLDHEACGSLSDAS*NSGLDC Trigger: ACAGTCAAGGCCAGAATTCAAACTGGCATCGGACAG...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS TCA 90 bp | TTGTCTCTCAGAATGGCCATAGTGGGAGTCCCCATGGAATGTCTCTaGCTGACCACAGTGAGGATCTGTATCATGTCTCTCAGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLRMAIVGVPMECL*LTTVRICIMSLRVL Trigger: AAGGACTCTGAGAGACATGATACAGATCCTCACTGTGGTCAGTCAGAGACATTCCATGGGGACTCCCACTATGGCCATTCTGAGAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CCA 90 bp | TCGGTCCAAGTGTTCCAGAATGGTTTCCACAGTTTCTGGATCATTTaGTCTCCGAAGGATGTCTCCAAACTCAGTGAGCAGCAGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVQVFQNGFHSFWII*SPKDVSKLSEQQLL Trigger: AAGCAGCTGCTGCTCACTGAGTTTGGAGACATCCTTCGGAGACCAAATGATCCAGAAACTGTGGAAACCATTCTGGAACACTTGGACCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CCA 90 bp | GCCCTTCACACTGGTCATCTTCACTCATGTGGGATTTTTCTCTGTTaGGGAAGCTTCTGGATTGGTCTTGGCCTCCTTGATACTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALHTGHLHSCGIFLC*GSFWIGLGLLDTSP Trigger: AGGAGAAGTATCAAGGAGGCCAAGACCAATCCAGAAGCTTCCCCAACAGAGAAAAATCCCACATGAGTGAAGATGACCAGTGTGAAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CCA 90 bp | GTTTCCAGATTTTTCTCTTCTTTGGGACTTTCCACCACCATGAGTTaGATGGAAACGTCTTCCCTGGGGCCCTTCACACTGGTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSRFFSSLGLSTTMS*METSSLGPFTLVIF Trigger: GAAGATGACCAGTGTGAAGGGCCCCAGGGAAGACGTTTCCATCCAACTCATGGTGGTGGAAAGTCCCAAAGAAGAGAAAAATCTGGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGCTGTCCGATGCCAGTTaGAATTCTGGCCTTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLISENLSLISSSPRLSDAS*NSGLGC Trigger: ACAGCCAAGGCCAGAATTCAAACTGGCATCGGACAG...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGGTGAGAACTCAGGTCTaGTCTGCCTTTCTGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLISENLSLISSSPRVRTQV*SAFLTL Trigger: CAGGGTCAGAAAGGCAGACAAGACCTGAGTTCTCAC...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS TCA 90 bp | GTCTTGATATTCTTCCTCCCCGCAGTGGTCCTGCTCACTGCTCTGTaGTTGCCAATCATATTCTTCATAGGAGTATGGCTCTTGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VLIFFLPAVVLLTAL*LPIIFFIGVWLLLY Trigger: GTACAGCAAGAGCCATACTCCTATGAAGAATATGATTGGCAATCACAGAGCAGTGAGCAGGACCACTGCGGGGAGGAAGAATATCAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGGCAGGCTTGGACCAATaGGAATACCAGCAAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLISENLSLISSSPRAGLDQ*EYQQEV Trigger: TACCTCTTGCTGGTATTCCAATTGGTCCAAGCCTGC...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCGGGTTTGCCTATCACTaGTTTGATGGCTTTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRGFSLFHPSLDHEACGSGFAYH*FDGFVP Trigger: AGGAACAAAGCCATCAAACAAGTGATAGGCAAACCC...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS GCA 90 bp | AGTTCCGGCGTTCTCCTTCATACCTCTGCCTATGTTGTCTGCCTGTaGTTTCTGAAAATTTATGGCTCCGTGTTCCTTCCTGATCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSGVLLHTSAYVVCL*FLKIYGSVFLPDHV Trigger: AACATGATCAGGAAGGAACACGGAGCCATAAATTTTCAGAAAGCACAGGCAGACAACATAGGCAGAGGTATGAAGGAGAACGCCGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGGGCAAAGACATATCCTaGACCTTTGGGCTGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLISENLSLISSSPRGKDIS*TFGLFM Trigger: CATGAACAGCCCAAAGGTCAAGGATATGTCTTTGCC...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | CCTAGGGGCTTCTCACTGTTTCATCCAAGTCTAGACCATGAAGCTTGTGGTTCCTTGCCTATCACTTGTTaGATGGCTTTGTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRGFSLFHPSLDHEACGSLPITC*MALFLF Trigger: GAAGAGGAACAAAGCCATCAAACAAGTGATAGGCAA...GGAACCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTTCCACCACCATGAGTaGGATGGAAACGTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRSLGIRDANIRESLLDFHHHE*DGNVFP Trigger: AGGGAAGACGTTTCCATCCAACTCATGGTGGTGGAA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS TCA 90 bp | GCGTTCTCCTTCATACCTCTGCCTATGTTGTCTGCCTGTGCTTTCTaGAAATTTATGGCTCCGTGTTCCTTCCTGATCATGTTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AFSFIPLPMLSACAF*KFMAPCSFLIMFFL Trigger: CAGAAAGAACATGATCAGGAAGGAACACGGAGCCATAAATTTTCAGAAAGCACAGGCAGACAACATAGGCAGAGGTATGAAGGAGAACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CCA 90 bp | TGCCTGTTCTTGGACATAGTCGTACAAAGGGCTGGAATAGTTGGCTaGTTTGGTAGGGTGGTTTCCAGATTTTTCTCTTCTTTGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: CLFLDIVVQRAGIVG*FGRVVSRFFSSLGL Trigger: AAGTCCCAAAGAAGAGAAAAATCTGGAAACCACCCTACCAAACCAGCCAACTATTCCAGCCCTTTGTACGACTATGTCCAAGAACAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCAGTTTCTGGATCATTaGGTCTCCGAAGGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RKRSLGIRDANIRESLLDQFLDH*VSEGCL Trigger: GAGACATCCTTCGGAGACCAAATGATCCAGAAACTG...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATATGAAAACTCTGTCCTaGTCTGTCTGTCCGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RKRSLGIRDANIRESLLDMKTLS*SVCPMP Trigger: TGGCATCGGACAGACAGACAAGGACAGAGTTTTCAT...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGACCATGACTGCTTTGTaGTCCAGATGTTTTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLISENLSLISSSPRTMTAL*SRCFRL Trigger: CAGTCTAAAACATCTGGACAACAAAGCAGTCATGGT...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACGTGAGGACTCTGGTCTaGCCTGCCTTTCTGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDVRTLV*PAFLTL Trigger: CAGGGTCAGAAAGGCAGGCAAGACCAGAGTCCTCAC...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGAAGAGTTTGTGTTGGTaGTCCTCTTTAGGCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLISENLSLISSSPRKSLCW*SSLGFH Trigger: ATGGAAGCCTAAAGAGGACAACCAACACAAACTCTT...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTTGTCTCTCCCTTTGTaGATGATGGTCTTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRSLGIRDANIRESLLDLSLPL*MMVLSP Trigger: AGGAGACAAGACCATCATCAACAAAGGGAGAGACAA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | GCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATCTCTAGCTCCCCTAGGAGATTTTTCTCTTCTTaGGGACTTTCCACCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASEMLISENLSLISSSPRRFFSS*GLSTTM Trigger: CATGGTGGTGGAAAGTCCCAAAGAAGAGAAAAATCT...CCTAGGGGAGCTAGAGATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CCA 90 bp | GAAAATCAACATATCCATTTCTGTCTCGGTCCAAGTGTTCCAGAATaGTTTCCACAGTTTCTGGATCATTTGGTCTCCGAAGGATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ENQHIHFCLGPSVPE*FPQFLDHLVSEGCL Trigger: GAGACATCCTTCGGAGACCAAATGATCCAGAAACTGTGGAAACCATTCTGGAACACTTGGACCGAGACAGAAATGGATATGTTGATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATGCTATAATCTGTGTCTaGTCTCTCAGAATGGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: RKRSLGIRDANIRESLLDAIICV*SLRMAI Trigger: TATGGCCATTCTGAGAGACAAGACACAGATTATAGC...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACGTGAGAACTCTGGTCTaGCCTGCCTTTCTGACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDVRTLV*PAFLTL Trigger: CAGGGTCAGAAAGGCAGGCAAGACCAGAGTTCTCAC...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCCTGCCTTTCTGACCTaGGTGAGTGTTCTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDPAFLT*VSVLAL Trigger: CAAGGCCAGAACACTCACCAAGGTCAGAAAGGCAGG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCATGTCTGCTGCTGGATTaGCTGCTCCCTTCTATCATG | + |
|
Preference number: 5 (lower is better) Translates to: DILPIRANAHQSPKSLSSCLLLD*LLPSIM Trigger: CATGATAGAAGGGAGCAGCAAATCCAGCAGCAGACA...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATTTGGACATTTTGATGTaGTCCTTCAGACTGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKRSLGIRDANIRESLLDLDILM*SFRLIV Trigger: CACAATCAGTCTGAAGGACAACATCAAAATGTCCAA...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGGAGCCTAGGCATCAGAGATGCTAATATCAGAGAATCTCTCCTTGATATCATGTTGGACATTTaGATGTTGTCCTTCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: RKRSLGIRDANIRESLLDIMLDI*MLSFRL Trigger: CAGTCTGAAGGACAACATCAAAATGTCCAACATGAT...ATCAAGGAGAGATTCTCTGATATTAGCATCTCTGATGCCTAGGCTCCTCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACGGGGAAGCTTCTGGATaGGTCTTGGCCTCCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDGEASG*VLASLI Trigger: TATCAAGGAGGCCAAGACCAATCCAGAAGCTTCCCC...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGATGAAAACTCTGGCCTaGACTGTCTGTCCGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKMKTLA*TVCPMP Trigger: TGGCATCGGACAGACAGTCAAGGCCAGAGTTTTCAT...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACGTGTCTATCCCAGTCTaGATATTCTTCCTCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDVSIPV*IFFLPA Trigger: TGCGGGGAGGAAGAATATCAAGACTGGGATAGACAC...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCATTGTTGATGATGGTCTaGTCTCCTGTGATTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DILPIRANAHQSPKSLSSLLMMV*SPVIVL Trigger: GAGCACAATCACAGGAGACAAGACCATCATCAACAA...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGGCTTCTGGATTGGTCTaGGCCTCCTTGATACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKASGLV*ASLILL Trigger: GAGAAGTATCAAGGAGGCCAAGACCAATCCAGAAGC...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGCTCAGAGTCCTTATCTaGTCTCTGGGACTGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKLRVLI*SLGLIM Trigger: CATGATCAGTCCCAGAGACAAGATAAGGACTCTGAG...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCTGTCCGATGCCAGTTaGAATTCTGGCTTTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDLSDAS*NSGFVC Trigger: ACAGACAAAGCCAGAATTCAAACTGGCATCGGACAG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTGGGATTTTTCTCTGTaGGGGAAGCTTCTGGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDWDFSL*GKLLDW Trigger: CCAATCCAGAAGCTTCCCCAACAGAGAAAAATCCCA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | GATATTTTACCCATAAGAGCCAATGCTCACCAAAGTCCAAAATCCCTTTCTTCAACTTGTTTGATGGCTTaGTTCCTCTTCATGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DILPIRANAHQSPKSLSSTCLMA*FLFMSL Trigger: CAAACTCATGAAGAGGAACAAAGCCATCAAACAAGT...TGAAGAAAGGGATTTTGGACTTTGGTGAGCATTGGCTCTTATGGGTAAAATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACTTGGTCTTGGCCTCCTaGATACTTCTCCTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDLVLAS*ILLLFF Trigger: GAAGAAAAGGAGAAGTATCAAGGAGGCCAAGACCAA...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACCTGACCATGACTGCTTaGTTGTCCAGATGTTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDLTMTA*LSRCFR Trigger: TCTAAAACATCTGGACAACAAAGCAGTCATGGTCAG...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | TTTCAAAAAGTGAGTACAAGTCTTCCAAAGCATTCTTGTAGACTGACGAAAAAGGCCTTTCTGACCTTGTaGAAAACTCTGGTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQKVSTSLPKHSCRLTKKAFLTL*KTLVFS Trigger: AGAAAAGACCAGAGTTTTCAACAAGGTCAGAAAGGC...CTTTTTCGTCAGTCTACAAGAATGCTTTGGAAGACTTGTACTCACTTTTTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS-3UTR CAA 90 bp | ATATATATCTTCTTTCTGTGTGATGGTTTAGTAGGTCTGGTCAATTCTCATGACGACGCACTTCTTCTCTaGAATTCTGCTGACTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: IYIFFLCDGLVGLVNSHDDALLL*NSADLV Trigger: AACTAAGTCAGCAGAATTCAAGAGAAGAAGTGCGTC...GTCATGAGAATTGACCAGACCTACTAAACCATCACACAGAAAGAAGATATATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TTGTCTGCCTTTCTGACCCCGGTGAGGACTCTGGTCTaGCCTGCCTTTCTGACCCAGGTGAGGACTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAFLTPVRTLV*PAFLTQVRTLV Trigger: GACCAGAGTCCTCACCTGGGTCAGAAAGGCAGGCAAGACCAGAGTCCTCACCGGGGTCAGAAAGGCAGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TTGTCTGCCTTTCTGACCCCGGTGAGGACTCTGGTCTaGCCTGCCTTTCTGACCCTGGTGAGGACTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAFLTPVRTLV*PAFLTLVRTLV Trigger: GACCAGAGTCCTCACCAGGGTCAGAAAGGCAGGCAAGACCAGAGTCCTCACCGGGGTCAGAAAGGCAGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TTGTCTGCCTTTCTGACCCTGGTGGGGACTCTGGTCTaGTCTGCCTTTCTGACCCCGGTGAGGACTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAFLTLVGTLV*SAFLTPVRTLV Trigger: GACCAGAGTCCTCACCGGGGTCAGAAAGGCAGACAAGACCAGAGTCCCCACCAGGGTCAGAAAGGCAGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TTGTCTGCCTTTCTGACCCAGGTGAGGACTCTGGTCTaGTCTGCCTTTCTGACCCTGGTGGGGACTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAFLTQVRTLV*SAFLTLVGTLV Trigger: GACCAGAGTCCCCACCAGGGTCAGAAAGGCAGACAAGACCAGAGTCCTCACCTGGGTCAGAAAGGCAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TTGTCTGCCTTTCTGACCCTGGTGAGGACTCTGGTCTaGTCTGCCTTTCTGACCCAGGTGAGGACTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAFLTLVRTLV*SAFLTQVRTLV Trigger: GACCAGAGTCCTCACCTGGGTCAGAAAGGCAGACAAGACCAGAGTCCTCACCAGGGTCAGAAAGGCAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | ATGCCTGCCTTTCTGACCCAGGTGAGGACTCTGGTCTaGTCTGCCTTTCTGACCCTGGTGAGAACTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MPAFLTQVRTLV*SAFLTLVRTQV Trigger: GACCTGAGTTCTCACCAGGGTCAGAAAGGCAGACAAGACCAGAGTCCTCACCTGGGTCAGAAAGGCAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS TCA 72 bp | AAAACTCTGTCCTTGACTGTCTGTCCGATGCCAGTTTaGATTCTGGCCTTGGCTGTCGGTCTGGCCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KTLSLTVCPMPV*ILALAVGLALV Trigger: CACCAGGGCCAGACCGACAGCCAAGGCCAGAATTCAAACTGGCATCGGACAGACAGTCAAGGACAGAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | GAAAACTCTGTCCTTGACTGTCTGTCCGATGCCAGTTaGAATTCTGGCCTTGGCTGTCGGTCTGGCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ENSVLDCLSDAS*NSGLGCRSGPG Trigger: ACCAGGGCCAGACCGACAGCCAAGGCCAGAATTCAAACTGGCATCGGACAGACAGTCAAGGACAGAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 90 bp | GATCAAAATGAAAACTCTGTCCTTGACTGTCTGTCCGATGCCAGTTaGAATTCTGGCCTTGGCTGTCGGTCTGGCCCTGGTGAGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: DQNENSVLDCLSDAS*NSGLGCRSGPGENS Trigger: TGAGTTCTCACCAGGGCCAGACCGACAGCCAAGGCCAGAATTCAAACTGGCATCGGACAGACAGTCAAGGACAGAGTTTTCATTTTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS TCA 72 bp | AGAATGGCCATAGTGGGAGTCCCCATGGAATGTCTCTaGCTGACCACAGTGAGGATCTGTATCATGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RMAIVGVPMECL*LTTVRICIMSL Trigger: GAGAGACATGATACAGATCCTCACTGTGGTCAGTCAGAGACATTCCATGGGGACTCCCACTATGGCCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS TCA 72 bp | TTCTTCCTCCCCGCAGTGGTCCTGCTCACTGCTCTGTaGTTGCCAATCATATTCTTCATAGGAGTATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FFLPAVVLLTAL*LPIIFFIGVWL Trigger: GAGCCATACTCCTATGAAGAATATGATTGGCAATCACAGAGCAGTGAGCAGGACCACTGCGGGGAGGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS TCA 72 bp | CCAGATTTTTCTCTTCTTTGGGACTTTCCACCACCATaGGTTGGATGGAAACGTCTTCCCTGGGGCCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PDFSLLWDFPPP*VGWKRLPWGPS Trigger: TGAAGGGCCCCAGGGAAGACGTTTCCATCCAACTCATGGTGGTGGAAAGTCCCAAAGAAGAGAAAAATCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CCA 72 bp | GTTGGATGGAAACGTCTTCCCTGGGGCCCTTCACACTaGTCATCTTCACTCATGTGGGATTTTTCTCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VGWKRLPWGPSH*SSSLMWDFSLL Trigger: CAACAGAGAAAAATCCCACATGAGTGAAGATGACCAGTGTGAAGGGCCCCAGGGAAGACGTTTCCATCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | GTTGTCCTCTTTAGGCTTCCATGTCTGCTGCTGGATTaGCTGCTCCCTTCTATCATGGGATCTCTGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVLFRLPCLLLD*LLPSIMGSLTL Trigger: CAGAGTCAGAGATCCCATGATAGAAGGGAGCAGCAAATCCAGCAGCAGACATGGAAGCCTAAAGAGGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 90 bp | TTTGTGTTGGTTGTCCTCTTTAGGCTTCCATGTCTGCTGCTGGATTaGCTGCTCCCTTCTATCATGGGATCTCTGACTCTGGGTTTGACG | + |
|
Preference number: 6 (lower is better) Translates to: FVLVVLFRLPCLLLD*LLPSIMGSLTLGLT Trigger: CGTCAAACCCAGAGTCAGAGATCCCATGATAGAAGGGAGCAGCAAATCCAGCAGCAGACATGGAAGCCTAAAGAGGACAACCAACACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 90 bp | GGTTTCCAGATTTTTCTCTTCTTTGGGACTTTCCACCACCATGAGTaGGATGGAAACGTCTTCCCTGGGGCCCTTCACACTGGTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: GFQIFLFFGTFHHHE*DGNVFPGALHTGHL Trigger: AAGATGACCAGTGTGAAGGGCCCCAGGGAAGACGTTTCCATCCAACTCATGGTGGTGGAAAGTCCCAAAGAAGAGAAAAATCTGGAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS GCA 72 bp | TCCGGCGTTCTCCTTCATACCTCTGCCTATGTTGTCTaGCTGTGCTTTCTGAAAATTTATGGCTCCGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGVLLHTSAYVV*LCFLKIYGSVF Trigger: GAACACGGAGCCATAAATTTTCAGAAAGCACAGGCAGACAACATAGGCAGAGGTATGAAGGAGAACGCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 72 bp | ATTTTTCTCTTCTTTGGGACTTTCCACCACCATGAGTaGGATGGAAACGTCTTCCCTGGGGCCCTTCACACT | + |
|
Preference number: 6 (lower is better) Translates to: IFLFFGTFHHHE*DGNVFPGALHT Trigger: AGTGTGAAGGGCCCCAGGGAAGACGTTTCCATCCAACTCATGGTGGTGGAAAGTCCCAAAGAAGAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 90 bp | GTCCTTATCTTGTCTCTGGGACTGATCATGTTGGACATTTTGATGTaGTCCTTCAGACTGATTGTGGTGAGAGTTCCGGCGTTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLILSLGLIMLDILM*SFRLIVVRVPAFSF Trigger: GAAGGAGAACGCCGGAACTCTCACCACAATCAGTCTGAAGGACAACATCAAAATGTCCAACATGATCAGTCCCAGAGACAAGATAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 90 bp | CTCAGAGTCCTTATCTTGTCTCTGGGACTGATCATGTTGGACATTTaGATGTTGTCCTTCAGACTGATTGTGGTGAGAGTTCCGGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRVLILSLGLIMLDI*MLSFRLIVVRVPAF Trigger: GAACGCCGGAACTCTCACCACAATCAGTCTGAAGGACAACATCAAAATGTCCAACATGATCAGTCCCAGAGACAAGATAAGGACTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CCA 72 bp | ACTGGTCATCTTCACTCATGTGGGATTTTTCTCTGTTaGGGAAGCTTCTGGATTGGTCTTGGCCTCCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TGHLHSCGIFLC*GSFWIGLGLLD Trigger: ATCAAGGAGGCCAAGACCAATCCAGAAGCTTCCCCAACAGAGAAAAATCCCACATGAGTGAAGATGACCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TCTGTTGGGGAAGCTTCTGGATTGGTCTTGGCCTCCTaGATACTTCTCCTTTTCTTCATGGGTTTGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVGEASGLVLAS*ILLLFFMGLSL Trigger: GAGAGACAAACCCATGAAGAAAAGGAGAAGTATCAAGGAGGCCAAGACCAATCCAGAAGCTTCCCCAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CCA 72 bp | CACTCATGTGGGATTTTTCTCTGTTGGGGAAGCTTCTaGATTGGTCTTGGCCTCCTTGATACTTCTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HSCGIFLCWGSF*IGLGLLDTSPF Trigger: AAAAGGAGAAGTATCAAGGAGGCCAAGACCAATCCAGAAGCTTCCCCAACAGAGAAAAATCCCACATGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 72 bp | GGGATCTCTGACTCTGGGTTTGACGCACTTCTTCTCTaGAATTCTGCTGACTTAGTTTTACTGACCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GISDSGFDALLL*NSADLVLLTFQ Trigger: CTGGAAGGTCAGTAAAACTAAGTCAGCAGAATTCAAGAGAAGAAGTGCGTCAAACCCAGAGTCAGAGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 72 bp | TGGTTTGGTAGGGTGGTTTCCAGATTTTTCTCTTCTTaGGGACTTTCCACCACCATGAGTTGGATGGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: WFGRVVSRFFSS*GLSTTMSWMET Trigger: CGTTTCCATCCAACTCATGGTGGTGGAAAGTCCCAAAGAAGAGAAAAATCTGGAAACCACCCTACCAAACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 90 bp | CTGACCACAGTGAGGATCTGTATCATGTCTCTCAGAGTCCTTATCTaGTCTCTGGGACTGATCATGTTGGACATTTTGATGTTGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTTVRICIMSLRVLI*SLGLIMLDILMLSF Trigger: GAAGGACAACATCAAAATGTCCAACATGATCAGTCCCAGAGACAAGATAAGGACTCTGAGAGACATGATACAGATCCTCACTGTGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS TCA 72 bp | TTCATACCTCTGCCTATGTTGTCTGCCTGTGCTTTCTaGAAATTTATGGCTCCGTGTTCCTTCCTGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: FIPLPMLSACAF*KFMAPCSFLIM Trigger: CATGATCAGGAAGGAACACGGAGCCATAAATTTTCAGAAAGCACAGGCAGACAACATAGGCAGAGGTATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CCA 72 bp | CATATCCATTTCTGTCTCGGTCCAAGTGTTCCAGAATaGTTTCCACAGTTTCTGGATCATTTGGTCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: HIHFCLGPSVPE*FPQFLDHLVSE Trigger: TTCGGAGACCAAATGATCCAGAAACTGTGGAAACCATTCTGGAACACTTGGACCGAGACAGAAATGGATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 72 bp | CTGACCTTCCAGATTGTTCAACATATGAGTCTCTTCTaGTTCTATCAGTCCCTAGAGAGTGCCTGTTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTFQIVQHMSLF*FYQSLESACFA Trigger: GGCAAAACAGGCACTCTCTAGGGACTGATAGAACAAGAAGAGACTCATATGTTGAACAATCTGGAAGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | CTTCTCCTTTTCTTCATGGGTTTGTCTCTCCCTTTGTaGATGATGGTCTTGTCTCCTGTGATTGTGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LLLFFMGLSLPL*MMVLSPVIVLI Trigger: GATGAGCACAATCACAGGAGACAAGACCATCATCAACAAAGGGAGAGACAAACCCATGAAGAAAAGGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TTGGCCTCCTTGATACTTCTCCTTTTCTTCATGGGTTaGTCTCTCCCTTTGTTGATGATGGTCTTGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LASLILLLFFMG*SLPLLMMVLSP Trigger: AGGAGACAAGACCATCATCAACAAAGGGAGAGACAAACCCATGAAGAAAAGGAGAAGTATCAAGGAGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 90 bp | CTCCTTTTCTTCATGGGTTTGTCTCTCCCTTTGTTGATGATGGTCTaGTCTCCTGTGATTGTGCTCATCTTCATGATGTCTACCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLFFMGLSLPLLMMV*SPVIVLIFMMSTML Trigger: CAACATGGTAGACATCATGAAGATGAGCACAATCACAGGAGACAAGACCATCATCAACAAAGGGAGAGACAAACCCATGAAGAAAAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | CTCAGAGTCCTTATCTTGTCTCTGGGACTGATCATGTaGGACATTTTGATGTTGTCCTTCAGACTGATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRVLILSLGLIM*DILMLSFRLIV Trigger: CACAATCAGTCTGAAGGACAACATCAAAATGTCCAACATGATCAGTCCCAGAGACAAGATAAGGACTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | TTCATGGGTTTGTCTCTCCCTTTGTTGATGATGGTCTaGTCTCCTGTGATTGTGCTCATCTTCATGATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FMGLSLPLLMMV*SPVIVLIFMMS Trigger: AGACATCATGAAGATGAGCACAATCACAGGAGACAAGACCATCATCAACAAAGGGAGAGACAAACCCATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | ATACTTCTCCTTTTCTTCATGGGTTTGTCTCTCCCTTaGTTGATGATGGTCTTGTCTCCTGTGATTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ILLLFFMGLSLP*LMMVLSPVIVL Trigger: GAGCACAATCACAGGAGACAAGACCATCATCAACAAAGGGAGAGACAAACCCATGAAGAAAAGGAGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 90 bp | ATCATGTCTCTCAGAGTCCTTATCTTGTCTCTGGGACTGATCATGTaGGACATTTTGATGTTGTCCTTCAGACTGATTGTGGTGAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: IMSLRVLILSLGLIM*DILMLSFRLIVVRV Trigger: AACTCTCACCACAATCAGTCTGAAGGACAACATCAAAATGTCCAACATGATCAGTCCCAGAGACAAGATAAGGACTCTGAGAGACATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 90 bp | TCCTTGATACTTCTCCTTTTCTTCATGGGTTTGTCTCTCCCTTTGTaGATGATGGTCTTGTCTCCTGTGATTGTGCTCATCTTCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLILLLFFMGLSLPL*MMVLSPVIVLIFMM Trigger: CATCATGAAGATGAGCACAATCACAGGAGACAAGACCATCATCAACAAAGGGAGAGACAAACCCATGAAGAAAAGGAGAAGTATCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 72 bp | CTTATCTTGTCTCTGGGACTGATCATGTTGGACATTTaGATGTTGTCCTTCAGACTGATTGTGGTGAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LILSLGLIMLDI*MLSFRLIVVRV Trigger: AACTCTCACCACAATCAGTCTGAAGGACAACATCAAAATGTCCAACATGATCAGTCCCAGAGACAAGATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
||
| CDS CAA 90 bp | TTCTATCATGGGATCTCTGACTCTGGGTTTGACGCACTTCTTCTCTaGAATTCTGCTGACTTAGTTTTACTGACCTTCCAGATTGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: FYHGISDSGFDALLL*NSADLVLLTFQIVQ Trigger: TTGAACAATCTGGAAGGTCAGTAAAACTAAGTCAGCAGAATTCAAGAGAAGAAGTGCGTCAAACCCAGAGTCAGAGATCCCATGATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 72 bp | ATCTTTTCGGAATCTTCCAGACTGACCATGACTGCTTaGTTGTCCAGATGTTTTAGACTGGCCATAATGAAA | + |
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Preference number: 6 (lower is better) Translates to: IFSESSRLTMTA*LSRCFRLAIMK Trigger: TTTCATTATGGCCAGTCTAAAACATCTGGACAACAAAGCAGTCATGGTCAGTCTGGAAGATTCCGAAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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| CDS CAA 90 bp | TTAGTTTTACTGACCTTCCAGATTGTTCAACATATGAGTCTCTTCTaGTTCTATCAGTCCCTAGAGAGTGCCTGTTTTGCCCTTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: LVLLTFQIVQHMSLF*FYQSLESACFALDF Trigger: AAAATCAAGGGCAAAACAGGCACTCTCTAGGGACTGATAGAACAAGAAGAGACTCATATGTTGAACAATCTGGAAGGTCAGTAAAACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045912.3 |
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