Pregenerated sensors for RPS6KA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025665Ensembl transcript IDs: ENSMUST00000065976.12, ENSMUST00000082034.13, ENSMUST00000096348.10, ENSMUST00000113428.9, ENSMUST00000123102.2, ENSMUST00000123213.8, ENSMUST00000123951.8, ENSMUST00000128819.8, ENSMUST00000132319.8, ENSMUST00000137712.9, ENSMUST00000138645.8, ENSMUST00000156639.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGTCAAACTGTGCGGGATCTGCTTTCTCGTATCCTTCTTTAACATaGTGTGTAATAGGTATCTCCTTAACCAATTCTTCCCGCCGGCAA | + |
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Preference number: 1 (lower is better) Translates to: KSNCAGSAFSYPSLT*CVIGISLTNSSRRQ Trigger: TTGCCGGCGGGAAGAATTGGTTAAGGAGATACCTATTACACAGCATGTTAAAGAAGGATACGAGAAAGCAGATCCCGCACAGTTTGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123102.2 |
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| 3UTR CCA 90 bp | TGTAATAGGTATCTCCTTAACCAATTCTTCCCGCCGGCAAGAAACTaGCTCTCCCTCTTCCATTGGCTCATCAACCATTTTCAGATCATT | + |
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Preference number: 1 (lower is better) Translates to: CNRYLLNQFFPPARN*LSLFHWLINHFQII Trigger: AATGATCTGAAAATGGTTGATGAGCCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGGGAAGAATTGGTTAAGGAGATACCTATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123102.2 |
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| 3UTR CCA 90 bp | AGGATTCAAGGTAGCTCAATATGCTACACTGTAGCTCAAACCACATaGAAATCAGGAATACAACAGAGTAGCTTCACTTATAAAGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: RIQGSSICYTVAQTT*KSGIQQSSFTYKGE Trigger: TTCCCCTTTATAAGTGAAGCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATATTGAGCTACCTTGAATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR GCA 90 bp | ATAAAACTTCAACTACATCGCCATAGGATTCAAGGTAGCTCAATATaGTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAG | + |
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Preference number: 1 (lower is better) Translates to: IKLQLHRHRIQGSSI*YTVAQTTWKSGIQQ Trigger: CTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATATTGAGCTACCTTGAATCCTATGGCGATGTAGTTGAAGTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR TCA 90 bp | GAATACAACAGAGTAGCTTCACTTATAAAGGGGAACAACGATGGTTaGATTCAATTGATTAACTTCAAAGTCAGCTTAGGTAACACCAAG | + |
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Preference number: 1 (lower is better) Translates to: EYNRVASLIKGNNDG*IQLINFKVSLGNTK Trigger: CTTGGTGTTACCTAAGCTGACTTTGAAGTTAATCAATTGAATTCAACCATCGTTGTTCCCCTTTATAAGTGAAGCTACTCTGTTGTATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACTAAACAGACTCAAATaGATGGAGTGCTTTGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGLNRLK*MECFGY Trigger: ATAGCCAAAGCACTCCATTCATTTGAGTCTGTTTAG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR TCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCATCGCATCAACACCATaGAGTGCATATTCAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSIASTP*SAYSKA Trigger: AGCCTTTGAATATGCACTTCATGGTGTTGATGCGAT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR CCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCACAGACTCAAATGAATaGAGTGCTTTGGCTATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSTDSNE*SALAMH Trigger: GTGCATAGCCAAAGCACTCCATTCATTTGAGTCTGT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR TCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCCTAAACAGACTCAAATaGATGGAGTGCTTTGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSLNRLK*MECFGY Trigger: ATAGCCAAAGCACTCCATTCATTTGAGTCTGTTTAG...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCATCGCATCAACACCATaGAGTGCATATTCAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSIASTP*SAYSKA Trigger: AGCCTTTGAATATGCACTTCATGGTGTTGATGCGAT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCCTAAACAGACTCAAATaGATGGAGTGCTTTGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSLNRLK*MECFGY Trigger: ATAGCCAAAGCACTCCATTCATTTGAGTCTGTTTAG...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAATCAACACCATGAAGTaGATATTCAAAGGCTTAACT | + |
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Preference number: 2 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGINTMK*IFKGLT Trigger: AGTTAAGCCTTTGAATATGCACTTCATGGTGTTGAT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTACAGACTCAAATGAATaGAGTGCTTTGGCTATGCAC | + |
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Preference number: 2 (lower is better) Translates to: PRSHQHHEVHIQRLNYDITDSNE*SALAMH Trigger: GTGCATAGCCAAAGCACTCCATTCATTTGAGTCTGT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAATCTATCAAAACTTTaGCACCAACCATATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGNLSKL*HQPYQE Trigger: TTCCTGATATGGTTGGTGCCAAAGTTTTGATAGATT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTTTGGAAAGTTAATGTaGAGAGAAGTTAAGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSFGKLM*REVKTL Trigger: CAAGGTCTTAACTTCTCTGCACATTAACTTTCCAAA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCATCAACACCATGAAGTaGATATTCAAAGGCTTAACT | + |
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Preference number: 2 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSINTMK*IFKGLT Trigger: AGTTAAGCCTTTGAATATGCACTTCATGGTGTTGAT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTTTGGAAAGTTAATGTaGAGAGAAGTTAAGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSFGKLM*REVKTL Trigger: CAAGGTCTTAACTTCTCTGCACATTAACTTTCCAAA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCATCAACACCATGAAGTaGATATTCAAAGGCTTAACT | + |
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Preference number: 2 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSINTMK*IFKGLT Trigger: AGTTAAGCCTTTGAATATGCACTTCATGGTGTTGAT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAATCTATCAAAACTTTaGCACCAACCATATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSNLSKL*HQPYQE Trigger: TTCCTGATATGGTTGGTGCCAAAGTTTTGATAGATT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTAATCTATCAAAACTTTaGCACCAACCATATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PRSHQHHEVHIQRLNYDINLSKL*HQPYQE Trigger: TTCCTGATATGGTTGGTGCCAAAGTTTTGATAGATT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR CCA 72 bp | TATCTCCTTAACCAATTCTTCCCGCCGGCAAGAAACTaGCTCTCCCTCTTCCATTGGCTCATCAACCATTTT | + |
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Preference number: 3 (lower is better) Translates to: YLLNQFFPPARN*LSLFHWLINHF Trigger: AAAATGGTTGATGAGCCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGGGAAGAATTGGTTAAGGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123102.2 |
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| 3UTR GCA 72 bp | CAACTACATCGCCATAGGATTCAAGGTAGCTCAATATaGTACACTGTAGCTCAAACCACATGGAAATCAGGA | + |
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Preference number: 3 (lower is better) Translates to: QLHRHRIQGSSI*YTVAQTTWKSG Trigger: TCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATATTGAGCTACCTTGAATCCTATGGCGATGTAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR CCA 72 bp | GGTAGCTCAATATGCTACACTGTAGCTCAAACCACATaGAAATCAGGAATACAACAGAGTAGCTTCACTTAT | + |
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Preference number: 3 (lower is better) Translates to: GSSICYTVAQTT*KSGIQQSSFTY Trigger: ATAAGTGAAGCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATATTGAGCTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAGGTCTCGCGCTGGGTaGCTGCCGACCTCGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGRSRAG*LPTSPA Trigger: GGCTGGCGAGGTCGGCAGTCACCCAGCGCGAGACCT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082034.13 |
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| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGCCCCAGCACCAGCATaGATCCCGTCTGCTGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGAPAPA*IPSAER Trigger: CCGCTCAGCAGACGGGATGCATGCTGGTGCTGGGGC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082034.13 |
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| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGGACCTGTGGCCAGATaGCGTGTGGCGTGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGGPVAR*RVACPS Trigger: AGAAGGACACGCCACACGCCATCTGGCCACAGGTCC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082034.13 |
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| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACGAGAAGAAGCTGCCTaGCCCCAGCACCAGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGREEAA*PQHQHA Trigger: TGCATGCTGGTGCTGGGGCCAGGCAGCTTCTTCTCG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082034.13 |
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| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACCGCCGGCAAGAAACTaGCTCTCCCTCTTCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGPPARN*LSLFHW Trigger: CCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGGCTCCAGGATTGGATaGTGCCTGTTTGGGTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGGSRIG*CLFGFR Trigger: TCGGAACCCAAACAGGCATCATCCAATCCTGGAGCC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCCCGCCGGCAAGAAACTaGCTCTCCCTCTTCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSPPARN*LSLFHW Trigger: CCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGG...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| 3UTR CAA 72 bp | CTTCCCGCCGGCAAGAAACTGGCTCTCCCTCTTCCATaGGCTCATCAACCATTTTCAGATCATTTACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPAGKKLALPLP*AHQPFSDHLPL Trigger: AAGAGGTAAATGATCTGAAAATGGTTGATGAGCCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123102.2 |
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| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCCAGAAGCAGGTCTaGAAGGAGGCTGGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGFQKQV*KEAGLL Trigger: GAGAAGTCCAGCCTCCTTTCAGACCTGCTTCTGGAA...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGAGTTGATGAGCGTTTaGACTGGCTGGCAAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGELMSV*TGWQTR Trigger: CCTGGTTTGCCAGCCAGTGCAAACGCTCATCAACTC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAACCTCCCGTTGCCTATaGGCAGCAGTATTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGTSRCL*AAVFPQ Trigger: CTGAGGAAATACTGCTGCGCATAGGCAACGGGAGGT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGACAGAATATGGTGCTaGCACTGCTTCCTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGDRIWC*HCFLWW Trigger: CCACCACAGGAAGCAGTGGCAGCACCATATTCTGTC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAACCTCCATGTCTTCTTaGTCCCAGGGATCCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGTSMSS*SQGSST Trigger: TGTGGAGGATCCCTGGGACCAAGAAGACATGGAGGT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | ACATGCTGTGTAATAGGTATCTCCTTAACCAATTCTTCCCGCCGGCAAGAAACTGGAATCTTCGTCTCCTaGGGTGAAAGTCCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: TCCVIGISLTNSSRRQETGIFVS*GESPQS Trigger: ACTCTGGGGACTTTCACCCCAGGAGACGAAGATTCC...AGTTTCTTGCCGGCGGGAAGAATTGGTTAAGGAGATACCTATTACACAGCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123102.2 |
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| CDS-3UTR TCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTTCCAGAAGCAGGTCTaGAAGGAGGCTGGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSFQKQV*KEAGLL Trigger: GAGAAGTCCAGCCTCCTTTCAGACCTGCTTCTGGAA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGGCTCCAGGATTGGATaGTGCCTGTTTGGGTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSGSRIG*CLFGFR Trigger: TCGGAACCCAAACAGGCATCATCCAATCCTGGAGCC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCACCTCCATGTCTTCTTaGTCCCAGGGATCCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSTSMSS*SQGSST Trigger: TGTGGAGGATCCCTGGGACCAAGAAGACATGGAGGT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACCTCAGGAGTATCATTaGGGCCGTTGGAAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGPQEYH*GRWKME Trigger: CTCCATTTTCCAACGGCCCCAATGATACTCCTGAGG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGATGGATGATGCCTGTTTaGGTTCCGAGCCAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGWMMPV*VPSQDR Trigger: TCTGTCTTGGCTCGGAACCCAAACAGGCATCATCCA...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCCCTGACCAAGAACCTTaGGCAAGTCAAACTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSPDQEP*ASQTVR Trigger: CCGCACAGTTTGACTTGCTCAAGGTTCTTGGTCAGG...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTTCCAGAAGCAGGTCTaGAAGGAGGCTGGACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSFQKQV*KEAGLL Trigger: GAGAAGTCCAGCCTCCTTTCAGACCTGCTTCTGGAA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCGCATCATATCCCTGTTaGGTGAGAACCTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSASYPC*VRTSGA Trigger: AGCACCTGAGGTTCTCACTCAACAGGGATATGATGC...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
||
| CDS-3UTR TCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGGCTCCAGGATTGGATaGTGCCTGTTTGGGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIGSRIG*CLFGFR Trigger: TCGGAACCCAAACAGGCATCATCCAATCCTGGAGCC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGAGCAAGTCAAACTGTaGGGGATCTGCTTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGEQVKL*GICFLV Trigger: TACGAGAAAGCAGATCCCGCACAGTTTGACTTGCTC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGAGTTGATGAGCGTTTaGACTGGCTGGCAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSELMSV*TGWQTR Trigger: CCTGGTTTGCCAGCCAGTGCAAACGCTCATCAACTC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCACCTCCCGTTGCCTATaGGCAGCAGTATTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSTSRCL*AAVFPQ Trigger: CTGAGGAAATACTGCTGCGCATAGGCAACGGGAGGT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGACAGAATATGGTGCTaGCACTGCTTCCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSDRIWC*HCFLWW Trigger: CCACCACAGGAAGCAGTGGCAGCACCATATTCTGTC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCAGCCAAGACAGAATATaGTGCTGCCACTGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSSQDRI*CCHCFL Trigger: CAGGAAGCAGTGGCAGCACCATATTCTGTCTTGGCT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCCTGACCAAGAACCTTaGGCAAGTCAAACTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIPDQEP*ASQTVR Trigger: CCGCACAGTTTGACTTGCTCAAGGTTCTTGGTCAGG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTTCAACTCCTTCTaGCCCCAATCTATTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGFFNSF*PQSICW Trigger: CCAGCAAATAGATTGGGGTCAGAAGGAGTTGAAGAA...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAATCCTTTGCTCCACGTaGAATATTGTCCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGILCST*NIVPDS Trigger: GGAATCTGGGACAATATTTCACGTGGAGCAAAGGAT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCGAGCAAGTCAAACTGTaGGGGATCTGCTTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSEQVKL*GICFLV Trigger: TACGAGAAAGCAGATCCCGCACAGTTTGACTTGCTC...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGAGTTGATGAGCGTTTaGACTGGCTGGCAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIELMSV*TGWQTR Trigger: CCTGGTTTGCCAGCCAGTGCAAACGCTCATCAACTC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAGTGAGAACCTCAGGTaGTACAAAGTTTGCGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGSENLR*YKVCGV Trigger: TACACCGCAAACTTTGTAGCACCTGAGGTTCTCACT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
||
| CDS-3UTR GCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTACCTCCCGTTGCCTATaGGCAGCAGTATTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDITSRCL*AAVFPQ Trigger: CTGAGGAAATACTGCTGCGCATAGGCAACGGGAGGT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGACAGAATATGGTGCTaGCACTGCTTCCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIDRIWC*HCFLWW Trigger: CCACCACAGGAAGCAGTGGCAGCACCATATTCTGTC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTACCTCCATGTCTTCTTaGTCCCAGGGATCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDITSMSS*SQGSST Trigger: TGTGGAGGATCCCTGGGACCAAGAAGACATGGAGGT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACTCTCCCTCTTCCATTaGCTCATCAACCATTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGLSLFH*LINHFQ Trigger: CTGAAAATGGTTGATGAGCCAATGGAAGAGGGAGAG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTATCATTGGGGCCGTTaGAAAATGGAGTGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSYHWGR*KMECSQ Trigger: CTGGCTACACTCCATTTTCCAACGGCCCCAATGATA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCCCTCAGGAGTATCATTaGGGCCGTTGGAAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSPQEYH*GRWKME Trigger: CTCCATTTTCCAACGGCCCCAATGATACTCCTGAGG...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTGGATGATGCCTGTTTaGGTTCCGAGCCAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSWMMPV*VPSQDR Trigger: TCTGTCTTGGCTCGGAACCCAAACAGGCATCATCCA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGATTTCTGTCTTTCCCTTaGAATGGCAAAGTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGFLSFP*NGKVPV Trigger: TACTGGCACTTTGCCATTTCAAGGGAAAGACAGAAA...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTTCTTCAACTCCTTCTaGCCCCAATCTATTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSFFNSF*PQSICW Trigger: CCAGCAAATAGATTGGGGTCAGAAGGAGTTGAAGAA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACAAAATCACAGATCTTaGTTGAATCTGGATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGQNHRS*LNLDGL Trigger: CAGCCCATCCAGATTCAATCAAGATCTGTGATTTTG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGCATCATATCCCTGTTaGGTGAGAACCTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIASYPC*VRTSGA Trigger: AGCACCTGAGGTTCTCACTCAACAGGGATATGATGC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
||
| CDS-3UTR TCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCATCCTTTGCTCCACGTaGAATATTGTCCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSILCST*NIVPDS Trigger: GGAATCTGGGACAATATTTCACGTGGAGCAAAGGAT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGAGCAAGTCAAACTGTaGGGGATCTGCTTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSEQVKL*GICFLV Trigger: TACGAGAAAGCAGATCCCGCACAGTTTGACTTGCTC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGTCTTTCCCTTGAAATaGCAAAGTGCCAGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGVFPLK*QSASKH Trigger: ATGCTTACTGGCACTTTGCCATTTCAAGGGAAAGAC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAGCGTTTGCACTGGCTaGCAAACCAGGAGAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSSVCTG*QTRRIF Trigger: AAAGATTCTCCTGGTTTGCCAGCCAGTGCAAACGCT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTATCATTGGGGCCGTTaGAAAATGGAGTGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSYHWGR*KMECSQ Trigger: CTGGCTACACTCCATTTTCCAACGGCCCCAATGATA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCCTCAGGAGTATCATTaGGGCCGTTGGAAAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIPQEYH*GRWKME Trigger: CTCCATTTTCCAACGGCCCCAATGATACTCCTGAGG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTTGGATGATGCCTGTTTaGGTTCCGAGCCAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIWMMPV*VPSQDR Trigger: TCTGTCTTGGCTCGGAACCCAAACAGGCATCATCCA...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAGTATAACGCTGATGTaGGTCCATGTGAAGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGSITLM*VHVKHM Trigger: CATATGCTTCACATGGACCCACATCAGCGTTATACT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGATACAGTACCACAAAATaGGTAGGCCTTCTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGYSTTK*VGLLFL Trigger: CAAGAAAAGAAGGCCTACTCATTTTGTGGTACTGTA...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTTTCTGTCTTTCCCTTaGAATGGCAAAGTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSFLSFP*NGKVPV Trigger: TACTGGCACTTTGCCATTTCAAGGGAAAGACAGAAA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTTCCTTTGCTCCACGTaGAATATTGTCCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSFLCST*NIVPDS Trigger: GGAATCTGGGACAATATTTCACGTGGAGCAAAGGAA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065976.12 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCATCCTTTGCTCCACGTaGAATATTGTCCCAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSILCST*NIVPDS Trigger: GGAATCTGGGACAATATTTCACGTGGAGCAAAGGAT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGAGCAAGTCAAACTGTaGGGGATCTGCTTTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIEQVKL*GICFLV Trigger: TACGAGAAAGCAGATCCCGCACAGTTTGACTTGCTC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAGTGAGAACCTCAGGTaGTACAAAGTTTGCGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSSENLR*YKVCGV Trigger: TACACCGCAAACTTTGTAGCACCTGAGGTTCTCACT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
||
| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGGTCTGAAAGGAGGCTaGACTTCTCTTTTATATAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGGLKGG*TSLLYS Trigger: ACTATATAAAAGAGAAGTCCAGCCTCCTTTCAGACC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTAGCGTTTGCACTGGCTaGCAAACCAGGAGAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDISVCTG*QTRRIF Trigger: AAAGATTCTCCTGGTTTGCCAGCCAGTGCAAACGCT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCCTGCAAATTCCACATTaGAAGCTGAGTGTATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSLQIPH*KLSVCI Trigger: GATGCATACACTCAGCTTCCAATGTGGAATTTGCAG...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTTATCATTGGGGCCGTTaGAAAATGGAGTGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIYHWGR*KMECSQ Trigger: CTGGCTACACTCCATTTTCCAACGGCCCCAATGATA...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTAGCCAAGACAGAATATaGTGCTGCCACTGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDISQDRI*CCHCFL Trigger: AAGGAAGCAGTGGCAGCACCATATTCTGTCTTGGCT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065976.12 |
||
| CDS-3UTR TCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGATTGACGATAAAGGGATaGTTTACTTCCACCAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGLTIKG*FTSTKI Trigger: TATCTTGGTGGAAGTAAATCATCCCTTTATCGTCAA...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAGACATCTCCTCCCCTaGGGAAATCCAATATTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSRHLLP*GNPILS Trigger: ACTTAATATTGGATTTCCTCAGGGGAGGAGATGTCT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTTTCTGTCTTTCCCTTaGAATGGCAAAGTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSFLSFP*NGKVPV Trigger: TACTGGCACTTTGCCATTTCAAGGGAAAGACAGAAA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTTTCTTCAACTCCTTCTaGCCCCAATCTATTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIFFNSF*PQSICW Trigger: CCAGCAAATAGATTGGGGTCAGAAGGAGTTGAAGAA...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTAGCCAGGGCCAATTCTaGAAGGTAGAATTTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDISQGQF*KVEFHI Trigger: GATGTGAAATTCTACCTTGCAGAATTGGCCCTGGCT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAGTGTATGCATCGCTTaGAAACAGAATAAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGSVCIA*KQNKNQ Trigger: TTGGTTCTTATTCTGTTTGCAAGCGATGCATACACT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTAGTGAGAACCTCAGGTaGTACAAAGTTTGCGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDISENLR*YKVCGV Trigger: TACACCGCAAACTTTGTAGCACCTGAGGTTCTCACT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCTCTCCCTCTTCCATTaGCTCATCAACCATTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDILSLFH*LINHFQ Trigger: CTGAAAATGGTTGATGAGCCAATGGAAGAGGGAGAG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGTCTTTCCCTTGAAATaGCAAAGTGCCAGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSVFPLK*QSASKH Trigger: ATGCTTACTGGCACTTTGCCATTTCAAGGGAAAGAC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGGCATTCAACTGTCTTaGTTATTACATACAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGGIQLS*LLHTAH Trigger: ATGTGCTGTATGTAATAACCAAGACAGTTGAATGCC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAGTATAACGCTGATGTaGGTCCATGTGAAGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSSITLM*VHVKHM Trigger: CATATGCTTCACATGGACCCACATCAGCGTTATACT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGGCAGTTGTTCTCTTTaGGTTATCCAAGGGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIGSCSL*VIQGCF Trigger: AAAGCACCCTTGGATAACCCAAAGAGAACAACTGCC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTACAGTACCACAAAATaGGTAGGCCTTCTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSYSTTK*VGLLFL Trigger: CAAGAAAAGAAGGCCTACTCATTTTGTGGTACTGTA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCAAAATCACAGATCTTaGTTGAATCTGGATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIQNHRS*LNLDGL Trigger: CAGCCCATCCAGATTCAATCAAGATCTGTGATTTTG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR GCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCAGTGTATGCATCGCTTaGAAACAGAATAAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSSVCIA*KQNKNQ Trigger: TTGGTTCTTATTCTGTTTGCAAGCGATGCATACACT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR GCA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAACATTACTAGCTTCCTaGTCTGAGAAACATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGTLLAS*SEKHFF Trigger: AAAGAAATGTTTCTCAGAGCAGGAAGCTAGTAATGT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGGTCTGAAAGGAGGCTaGACTTCTCTTTTATATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSGLKGG*TSLLYS Trigger: ACTATATAAAAGAGAAGTCCAGCCTCCTTTCAGACC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCTGCAAATTCCACATTaGAAGCTGAGTGTATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDILQIPH*KLSVCI Trigger: GATGCATACACTCAGCTTCCAATGTGGAATTTGCAG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTTGATTGAATCTGGATaGGCTGACTCATCCATATAT | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSLIESG*ADSSIY Trigger: ATATATGGATGAGTCAGCCCATCCAGATTCAATCAA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTTGACGATAAAGGGATaGTTTACTTCCACCAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSLTIKG*FTSTKI Trigger: TATCTTGGTGGAAGTAAATCATCCCTTTATCGTCAA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTTACAGTACCACAAAATaGGTAGGCCTTCTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIYSTTK*VGLLFL Trigger: CAAGAAAAGAAGGCCTACTCATTTTGTGGTACTGTA...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCGGGCATTCCAAGTTTTaGTTTCAGTATCATATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSGHSKF*FQYHIH Trigger: ATGAATATGATACTGAAAGCAAAACTTGGAATGCCC...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAGTGTATGCATCGCTTaGAAACAGAATAAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSSVCIA*KQNKNQ Trigger: TTGGTTCTTATTCTGTTTGCAAGCGATGCATACACT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGGTCTGAAAGGAGGCTaGACTTCTCTTTTATATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIGLKGG*TSLLYS Trigger: ACTATATAAAAGAGAAGTCCAGCCTCCTTTCAGACC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGGCATTCAACTGTCTTaGTTATTACATACAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSGIQLS*LLHTAH Trigger: ATGTGCTGTATGTAATAACCAAGACAGTTGAATGCC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCACATTACTAGCTTCCTaGTCTGAGAAACATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSTLLAS*SEKHFF Trigger: AAAGAAATGTTTCTCAGAGCAGGAAGCTAGTAATGT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGGCATTCAACTGTCTTaGTTATTACATACAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIGIQLS*LLHTAH Trigger: ATGTGCTGTATGTAATAACCAAGACAGTTGAATGCC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTTTGATTGAATCTGGATaGGCTGACTCATCCATATAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDILIESG*ADSSIY Trigger: ATATATGGATGAGTCAGCCCATCCAGATTCAATCAA...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTACATTACTAGCTTCCTaGTCTGAGAAACATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSHQHHEVHIQRLNYDITLLAS*SEKHFF Trigger: AAAGAAATGTTTCTCAGAGCAGGAAGCTAGTAATGT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS GCA 90 bp | CTTCAGGGGCTCTCGAGAAGAAGCTGCCTGGCCCCAGCACCAGCATaGATCCCGTCTGCTGAGCGGGCTCCTGGTCGTCTTCGAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LQGLSRRSCLAPAPA*IPSAERAPGRLRRT Trigger: GGTCCTTCGAAGACGACCAGGAGCCCGCTCAGCAGACGGGATGCATGCTGGTGCTGGGGCCAGGCAGCTTCTTCTCGAGAGCCCCTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000082034.13 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000156639.2 |
||
| CDS TCA 90 bp | TATGGTGCTGCCACTGCTTCCTGTGGTGGCTCATCTGAGTTTGGCTaGTGGCGCGGCAGTTGTTCTCTTTGGGTTATCCAAGGGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YGAATASCGGSSEFG*WRGSCSLWVIQGCF Trigger: AAAGCACCCTTGGATAACCCAAAGAGAACAACTGCCGCGCCATCAGCCAAACTCAGATGAGCCACCACAGGAAGCAGTGGCAGCACCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
||
| CDS TCA 90 bp | CAAGACAGAATATGGTGCTGCCACTGCTTCCTGTGGTGGCTCATCTaGGTTTGGCTGATGGCGCGGCAGTTGTTCTCTTTGGGTTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QDRIWCCHCFLWWLI*VWLMARQLFSLGYP Trigger: TGGATAACCCAAAGAGAACAACTGCCGCGCCATCAGCCAAACTCAGATGAGCCACCACAGGAAGCAGTGGCAGCACCATATTCTGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
||
| CDS GCA 90 bp | GCTCATCAACCATTTTCAGATCATTTACCTCGCTACTGCTCGTGCTaGCGAACACCTCCATGTCTTCTTGGTCCCAGGGATCCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AHQPFSDHLPRYCSC*RTPPCLLGPRDPPQ Trigger: CTGTGGAGGATCCCTGGGACCAAGAAGACATGGAGGTGTTCGGCAGCACGAGCAGTAGCGAGGTAAATGATCTGAAAATGGTTGATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137712.9 |
||
| CDS GCA 90 bp | TTGGCTCATCAACCATTTTCAGATCATTTACCTCGCTACTGCTCGTaGTGCCGAACACCTCCATGTCTTCTTGGTCCCAGGGATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAHQPFSDHLPRYCS*CRTPPCLLGPRDPP Trigger: TGGAGGATCCCTGGGACCAAGAAGACATGGAGGTGTTCGGCAGCACGAGCAGTAGCGAGGTAAATGATCTGAAAATGGTTGATGAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137712.9 |
||
| CDS GCA 90 bp | TATTGTCCCAGATTCCACCACTCAAAGAGAACCTCCCGTTGCCTATaGGCAGCAGTATTTCCTCAGGAGTATCATTGGGGCCGTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YCPRFHHSKRTSRCL*AAVFPQEYHWGRWK Trigger: TTTCCAACGGCCCCAATGATACTCCTGAGGAAATACTGCTGCGCATAGGCAACGGGAGGTTCTCTTTGAGTGGTGGAATCTGGGACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
||
| CDS GCA 90 bp | CTTCCATTGGCTCATCAACCATTTTCAGATCATTTACCTCGCTACTaGTCGTGCTGCCGAACACCTCCATGTCTTCTTGGTCCCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPLAHQPFSDHLPRY*SCCRTPPCLLGPRD Trigger: ATCCCTGGGACCAAGAAGACATGGAGGTGTTCGGCAGCACGAGCAGTAGCGAGGTAAATGATCTGAAAATGGTTGATGAGCCAATGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137712.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACACCTCCATGTCTTCTaGGTCCCAGGGATCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGHLHVF*VPGILH Trigger: GTGGAGGATCCCTGGGACCAAGAAGACATGGAGGTG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | TCCCGCCGGCAAGAAACTGGCTCTCCCTCTTCCATTGGCTCATCAACCATTTTCCCAGAGTTAGTCACCTaGGTGTGTTTTTGTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRQETGSPSSIGSSTIFPELVT*VCFCFP Trigger: AGGGAAACAAAAACACACCAAGGTGACTAACTCTGG...GAAAATGGTTGATGAGCCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123102.2 |
||
| CDS TCA 90 bp | AGCCAAGACAGAATATGGTGCTGCCACTGCTTCCTTTGCTCCACGTaGAATATTGTCCCAGATTCCACCACTCAAAGAGAACCTCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SQDRIWCCHCFLCST*NIVPDSTTQREPPV Trigger: AACGGGAGGTTCTCTTTGAGTGGTGGAATCTGGGACAATATTTCACGTGGAGCAAAGGAAGCAGTGGCAGCACCATATTCTGTCTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065976.12 |
||
| CDS CCA 90 bp | AACCAATTCTTCCCGCCGGCAAGAAACTGGCTCTCCCTCTTCCATTaGCTCATCAACCATTTTCAGATCATTTACCTCGCTACTGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: NQFFPPARNWLSLFH*LINHFQIIYLATAR Trigger: ACGAGCAGTAGCGAGGTAAATGATCTGAAAATGGTTGATGAGCCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGGGAAGAATTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137712.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCCACCTCCATGTCTTCTaGGTCCCAGGGATCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSHLHVF*VPGILH Trigger: GTGGAGGATCCCTGGGACCAAGAAGACATGGAGGTG...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAGAGTTGATGAGCGTTaGCACTGGCTGGCAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGRVDER*HWLANQ Trigger: CTGGTTTGCCAGCCAGTGCAAACGCTCATCAACTCT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGTGGCTCATCTGAGTTaGGCTGATGGCGCGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSVAHLS*ADGAAV Trigger: AACTGCCGCGCCATCAGCCAAACTCAGATGAGCCAC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAGGTTCAAGTTAGAGTaGGACCTGTGGCCAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGRFKLE*DLWPDG Trigger: GCCATCTGGCCACAGGTCCAACTCTAACTTGAACCT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082034.13 |
||
| CDS CCA 90 bp | AACCAATTCTTCCCGCCGGCAAGAAACTGGCTCTCCCTCTTCCATTaGCTCATCAACCATTTTCAGATCATTTACCTCTTTGCGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: NQFFPPARNWLSLFH*LINHFQIIYLFAFM Trigger: CATGAACGCAAAGAGGTAAATGATCTGAAAATGGTTGATGAGCCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGGGAAGAATTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000128819.8 ENSMUST00000138645.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCACCTCCATGTCTTCTaGGTCCCAGGGATCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIHLHVF*VPGILH Trigger: GTGGAGGATCCCTGGGACCAAGAAGACATGGAGGTG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCAGAGTTGATGAGCGTTaGCACTGGCTGGCAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSRVDER*HWLANQ Trigger: CTGGTTTGCCAGCCAGTGCAAACGCTCATCAACTCT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAGCATCATATCCCTGTaGAGTGAGAACCTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGSIISL*SENLRC Trigger: GCACCTGAGGTTCTCACTCAACAGGGATATGATGCT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGATCCTCAGGAGTATCATaGGGGCCGTTGGAAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGSSGVS*GPLENG Trigger: TCCATTTTCCAACGGCCCCAATGATACTCCTGAGGA...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAAAAGAGAACCTCCCGTaGCCTATGCGCAGCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGKENLP*PMRSSI Trigger: AATACTGCTGCGCATAGGCAACGGGAGGTTCTCTTT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGCTCCACGTGAAATATaGTCCCAGATTCCACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGAPREI*SQIPPL Trigger: GAGTGGTGGAATCTGGGACAATATTTCACGTGGAGC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACGGCAGTTGTTCTCTTaGGGTTATCCAAGGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGRQLFS*GYPRVL Trigger: AAGCACCCTTGGATAACCCAAAGAGAACAACTGCCG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGTGGCTCATCTGAGTTaGGCTGATGGCGCGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIVAHLS*ADGAAV Trigger: AACTGCCGCGCCATCAGCCAAACTCAGATGAGCCAC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAGAGTTGATGAGCGTTaGCACTGGCTGGCAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSRVDER*HWLANQ Trigger: CTGGTTTGCCAGCCAGTGCAAACGCTCATCAACTCT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCAGCATCATATCCCTGTaGAGTGAGAACCTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSSIISL*SENLRC Trigger: GCACCTGAGGTTCTCACTCAACAGGGATATGATGCT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
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| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTCCTCAGGAGTATCATaGGGGCCGTTGGAAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSSSGVS*GPLENG Trigger: TCCATTTTCCAACGGCCCCAATGATACTCCTGAGGA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCGCTCCACGTGAAATATaGTCCCAGATTCCACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSAPREI*SQIPPL Trigger: GAGTGGTGGAATCTGGGACAATATTTCACGTGGAGC...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACTGCCACTGCTTCCTTaGCTCCACGTGAAATATTGT | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGLPLLP*LHVKYC Trigger: ACAATATTTCACGTGGAGCAAAGGAAGCAGTGGCAG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065976.12 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCCGGCAGTTGTTCTCTTaGGGTTATCCAAGGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSRQLFS*GYPRVL Trigger: AAGCACCCTTGGATAACCCAAAGAGAACAACTGCCG...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS GCA 90 bp | ATTGGCTCATCAACCATTTTCAGATCATTTACCTCTTTGCGTTCATaGTCCCGCATAACCGTTGCTGCGTTCTTCATGGTAAACACAACC | + |
|
Preference number: 5 (lower is better) Translates to: IGSSTIFRSFTSLRS*SRITVAAFFMVNTT Trigger: GGTTGTGTTTACCATGAAGAACGCAGCAACGGTTATGCGGGAGCATGAACGCAAAGAGGTAAATGATCTGAAAATGGTTGATGAGCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000138645.8 |
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| CDS GCA 90 bp | AGATCCCTGACCAAGAACCTTGAGCAAGTCAAACTGTGCGGGATCTaGTTTCTCGTATCCTTCTTTAACATGCTGTGTAATAGGTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLTKNLEQVKLCGI*FLVSFFNMLCNRYL Trigger: GAGATACCTATTACACAGCATGTTAAAGAAGGATACGAGAAAGCAGATCCCGCACAGTTTGACTTGCTCAAGGTTCTTGGTCAGGGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000128819.8 ENSMUST00000137712.9 ENSMUST00000138645.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTAGAGTTGATGAGCGTTaGCACTGGCTGGCAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIRVDER*HWLANQ Trigger: CTGGTTTGCCAGCCAGTGCAAACGCTCATCAACTCT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAACGATGAACGACTCCTaGAGAATGAAGGCATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGTMNDS*RMKAFN Trigger: GTTGAATGCCTTCATTCTCAAGGAGTCGTTCATCGT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGACTCCACGAAGCTGTTTaGCAAACCCAAAATCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGLHEAV*QTQNHR Trigger: TCTGTGATTTTGGGTTTGCAAAACAGCTTCGTGGAG...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAGCATCATATCCCTGTaGAGTGAGAACCTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSSIISL*SENLRC Trigger: GCACCTGAGGTTCTCACTCAACAGGGATATGATGCT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTCCTCAGGAGTATCATaGGGGCCGTTGGAAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSSSGVS*GPLENG Trigger: TCCATTTTCCAACGGCCCCAATGATACTCCTGAGGA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCAAAGAGAACCTCCCGTaGCCTATGCGCAGCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSKENLP*PMRSSI Trigger: AATACTGCTGCGCATAGGCAACGGGAGGTTCTCTTT...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGCTCCACGTGAAATATaGTCCCAGATTCCACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSAPREI*SQIPPL Trigger: GAGTGGTGGAATCTGGGACAATATTTCACGTGGAGC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAATTTCTGTCTTTCCCTaGAAATGGCAAAGTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGISVFP*KWQSAS Trigger: ACTGGCACTTTGCCATTTCAAGGGAAAGACAGAAAT...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTTCAGCACTAAGGAATaGGGGCATTCCAAGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSFSTKE*GHSKFC Trigger: GCAAAACTTGGAATGCCCCAATTCCTTAGTGCTGAA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCACGATGAACGACTCCTaGAGAATGAAGGCATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSTMNDS*RMKAFN Trigger: GTTGAATGCCTTCATTCTCAAGGAGTCGTTCATCGT...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCCTCCACGAAGCTGTTTaGCAAACCCAAAATCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSLHEAV*QTQNHR Trigger: TCTGTGATTTTGGGTTTGCAAAACAGCTTCGTGGAG...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCTGTAGCCAGCCAACATaGTGTACAAAAGGACTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSCSQPT*CTKGLL Trigger: TAGGAGTCCTTTTGTACACAATGTTGGCTGGCTACA...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTTCCTCAGGAGTATCATaGGGGCCGTTGGAAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDISSGVS*GPLENG Trigger: TCCATTTTCCAACGGCCCCAATGATACTCCTGAGGA...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTAAAGAGAACCTCCCGTaGCCTATGCGCAGCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIKENLP*PMRSSI Trigger: AATACTGCTGCGCATAGGCAACGGGAGGTTCTCTTT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGATAATGTTGGGATGTaGTCCATAGCGCATCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGDNVGM*SIAHQN Trigger: ATTTTGATGCGCTATGGACAACATCCCAACATTATC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCCCAAAATCACAGATCTaGATTGAATCTGGATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSPKSQI*IESGWA Trigger: AGCCCATCCAGATTCAATCAAGATCTGTGATTTTGG...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCCTCCACGAAGCTGTTTaGCAAACCCAAAATCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSLHEAV*QTQNHR Trigger: TCTGTGATTTTGGGTTTGCAAAACAGCTTCGTGGAG...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCTGTAGCCAGCCAACATaGTGTACAAAAGGACTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSCSQPT*CTKGLL Trigger: TAGGAGTCCTTTTGTACACAATGTTGGCTGGCTACA...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS CCA 90 bp | CAGAAGGTATCATCCGGTTTTCCAGAAGCAGGTCTGAAAGGAGGCTaGACTTCTCTTTTATATAGTTTATTCCAGTCAATGGAAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QKVSSGFPEAGLKGG*TSLLYSLFQSMEAK Trigger: TTTTGCTTCCATTGACTGGAATAAACTATATAAAAGAGAAGTCCAGCCTCCTTTCAGACCTGCTTCTGGAAAACCGGATGATACCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
||
| CDS-3UTR CAA 90 bp | GTACACCTAGCACACACTAAACAAAACTCCTATCCGCCAGCTTACATTCATGGAGAATCTTTAGGTGTTTaGGCAGTAAATTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: VHLAHTKQNSYPPAYIHGESLGV*AVNSGS Trigger: TGATCCTGAATTTACTGCCAAAACACCTAAAGATTC...TCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTTTAGTGTGTGCTAGGTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCGATAATGTTGGGATGTaGTCCATAGCGCATCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSDNVGM*SIAHQN Trigger: ATTTTGATGCGCTATGGACAACATCCCAACATTATC...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTACGATGAACGACTCCTaGAGAATGAAGGCATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDITMNDS*RMKAFN Trigger: GTTGAATGCCTTCATTCTCAAGGAGTCGTTCATCGT...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCCCAAAATCACAGATCTaGATTGAATCTGGATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSPKSQI*IESGWA Trigger: AGCCCATCCAGATTCAATCAAGATCTGTGATTTTGG...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCTCCACGAAGCTGTTTaGCAAACCCAAAATCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDILHEAV*QTQNHR Trigger: TCTGTGATTTTGGGTTTGCAAAACAGCTTCGTGGAG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
||
| CDS TCA 90 bp | AACTGTCTTGGTTATTACATACAGCACATTACTAGCTTCCTGCTCTaGGAAACATTTCTTTTTGAGAATCCGATCCAGAAGTTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NCLGYYIQHITSFLL*ETFLFENPIQKFSS Trigger: GGAGGAGAACTTCTGGATCGGATTCTCAAAAAGAAATGTTTCTCAGAGCAGGAAGCTAGTAATGTGCTGTATGTAATAACCAAGACAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGATAATGTTGGGATGTaGTCCATAGCGCATCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSDNVGM*SIAHQN Trigger: ATTTTGATGCGCTATGGACAACATCCCAACATTATC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CAA 90 bp | AACAAAACTCCTATCCGCCAGCTTACATTCATGGATTCTGTCAGTAGTAGTAGCGAGAAACATTTCTTTTaGAGAATCCGATCCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NKTPIRQLTFMDSVSSSSEKHFF*RIRSRS Trigger: ACTTCTGGATCGGATTCTCAAAAAGAAATGTTTCTC...GCTACTACTACTGACAGAATCCATGAATGTAAGCTGGCGGATAGGAGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTCCAAAATCACAGATCTaGATTGAATCTGGATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIPKSQI*IESGWA Trigger: AGCCCATCCAGATTCAATCAAGATCTGTGATTTTGG...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGAATCTTTAGGTGTTTaGGCAGTAAATTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSESLGV*AVNSGS Trigger: TGATCCTGAATTTACTGCCAAAACACCTAAAGATTC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS-3UTR CAA 90 bp | ATATGCTACACTGTAGCTCAAACCACATGGAAATCAGGAATACAACAGAGTAGCGAGAAACATTTCTTTTaGAGAATCCGATCCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICYTVAQTTWKSGIQQSSEKHFF*RIRSRS Trigger: ACTTCTGGATCGGATTCTCAAAAAGAAATGTTTCTC...GCTACTCTGTTGTATTCCTGATTTCCATGTGGTTTGAGCTACAGTGTAGCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS GCA 90 bp | CATTCAACTGTCTTGGTTATTACATACAGCACATTACTAGCTTCCTaGTCTGAGAAACATTTCTTTTTGAGAATCCGATCCAGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSTVLVITYSTLLAS*SEKHFFLRIRSRSS Trigger: AGAACTTCTGGATCGGATTCTCAAAAAGAAATGTTTCTCAGAGCAGGAAGCTAGTAATGTGCTGTATGTAATAACCAAGACAGTTGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS-3UTR CAA 90 bp | CCAAGATCGCATCAACACCATGAAGTGCATATTCAAAGGCTTAACTATGACATTGAATCTTTAGGTGTTTaGGCAGTAAATTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSHQHHEVHIQRLNYDIESLGV*AVNSGS Trigger: TGATCCTGAATTTACTGCCAAAACACCTAAAGATTC...AATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 |
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| CDS TCA 72 bp | CTGCCTGGCCCCAGCACCAGCATGCATCCCGTCTGCTaGGCGGGCTCCTGGTCGTCTTCGAAGGACCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPGPSTSMHPVC*AGSWSSSKDQV Trigger: GACCTGGTCCTTCGAAGACGACCAGGAGCCCGCTCAGCAGACGGGATGCATGCTGGTGCTGGGGCCAGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000082034.13 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000156639.2 |
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| CDS CCA 72 bp | CATCGCCGCTTCAGGGGCTCTCGAGAAGAAGCTGCCTaGCCCCAGCACCAGCATGCATCCCGTCTGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HRRFRGSREEAA*PQHQHASRLLS Trigger: GCTCAGCAGACGGGATGCATGCTGGTGCTGGGGCCAGGCAGCTTCTTCTCGAGAGCCCCTGAAGCGGCGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000082034.13 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000156639.2 |
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| CDS GCA 72 bp | CTCTCGAGAAGAAGCTGCCTGGCCCCAGCACCAGCATaGATCCCGTCTGCTGAGCGGGCTCCTGGTCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSRRSCLAPAPA*IPSAERAPGRL Trigger: AAGACGACCAGGAGCCCGCTCAGCAGACGGGATGCATGCTGGTGCTGGGGCCAGGCAGCTTCTTCTCGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000082034.13 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000156639.2 |
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| CDS GCA 72 bp | GTAGCATCGCCGCTTCAGGGGCTCTCGAGAAGAAGCTaGCTGGCCCCAGCACCAGCATGCATCCCGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VASPLQGLSRRS*LAPAPACIPSA Trigger: AGCAGACGGGATGCATGCTGGTGCTGGGGCCAGGCAGCTTCTTCTCGAGAGCCCCTGAAGCGGCGATGCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000082034.13 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000156639.2 |
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| CDS CCA 72 bp | CTACTGCTCGTGCTGCCGAACACCTCCATGTCTTCTTaGTCCCAGGGATCCTCCACAGGGGCGAACGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLVLPNTSMSS*SQGSSTGANGS Trigger: GCTACCGTTCGCCCCTGTGGAGGATCCCTGGGACCAAGAAGACATGGAGGTGTTCGGCAGCACGAGCAGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000137712.9 ENSMUST00000156639.2 |
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| CDS CAA 72 bp | GTGCTGCCACTGCTTCCTGTGGTGGCTCATCTGAGTTaGGCTGATGGCGCGGCAGTTGTTCTCTTTGGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: VLPLLPVVAHLS*ADGAAVVLFGL Trigger: TAACCCAAAGAGAACAACTGCCGCGCCATCAGCCAAACTCAGATGAGCCACCACAGGAAGCAGTGGCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS TCA 72 bp | ATATGGTGCTGCCACTGCTTCCTGTGGTGGCTCATCTaGGTTTGGCTGATGGCGCGGCAGTTGTTCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IWCCHCFLWWLI*VWLMARQLFSL Trigger: CAAAGAGAACAACTGCCGCGCCATCAGCCAAACTCAGATGAGCCACCACAGGAAGCAGTGGCAGCACCATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS CAA 90 bp | CAGAATATGGTGCTGCCACTGCTTCCTGTGGTGGCTCATCTGAGTTaGGCTGATGGCGCGGCAGTTGTTCTCTTTGGGTTATCCAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QNMVLPLLPVVAHLS*ADGAAVVLFGLSKG Trigger: ACCCTTGGATAACCCAAAGAGAACAACTGCCGCGCCATCAGCCAAACTCAGATGAGCCACCACAGGAAGCAGTGGCAGCACCATATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS CAA 72 bp | GGTGCTGCCACTGCTTCCTTTGCTCCACGTGAAATATaGTCCCAGATTCCACCACTCAAAGAGAACCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GAATASFAPREI*SQIPPLKENLP Trigger: CGGGAGGTTCTCTTTGAGTGGTGGAATCTGGGACAATATTTCACGTGGAGCAAAGGAAGCAGTGGCAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065976.12 |
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| CDS CAA 90 bp | CGTGAAATATTGTCCCAGATTCCACCACTCAAAGAGAACCTCCCGTaGCCTATGCGCAGCAGTATTTCCTCAGGAGTATCATTGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: REILSQIPPLKENLP*PMRSSISSGVSLGP Trigger: CGGCCCCAATGATACTCCTGAGGAAATACTGCTGCGCATAGGCAACGGGAGGTTCTCTTTGAGTGGTGGAATCTGGGACAATATTTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS GCA 72 bp | AGATTCCACCACTCAAAGAGAACCTCCCGTTGCCTATaGGCAGCAGTATTTCCTCAGGAGTATCATTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFHHSKRTSRCL*AAVFPQEYHWG Trigger: GCCCCAATGATACTCCTGAGGAAATACTGCTGCGCATAGGCAACGGGAGGTTCTCTTTGAGTGGTGGAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS CAA 72 bp | CTTCCCGCCGGCAAGAAACTGGCTCTCCCTCTTCCATaGGCTCATCAACCATTTTCAGATCATTTACCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LPAGKKLALPLP*AHQPFSDHLPR Trigger: GCGAGGTAAATGATCTGAAAATGGTTGATGAGCCAATGGAAGAGGGAGAGCCAGTTTCTTGCCGGCGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137712.9 |
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| CDS TCA 72 bp | ACACAACCTGTGGCAAGGAATCTTCGTCTCCTGGGGTaGAAGTCCCCAGAGTTAGTCACCTTGGTGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TQPVARNLRLLG*KSPELVTLVCF Trigger: AAAACACACCAAGGTGACTAACTCTGGGGACTTTCACCCCAGGAGACGAAGATTCCTTGCCACAGGTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123102.2 |
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| CDS CAA 72 bp | TTGTCCCAGATTCCACCACTCAAAGAGAACCTCCCGTaGCCTATGCGCAGCAGTATTTCCTCAGGAGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LSQIPPLKENLP*PMRSSISSGVS Trigger: TGATACTCCTGAGGAAATACTGCTGCGCATAGGCAACGGGAGGTTCTCTTTGAGTGGTGGAATCTGGGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS CAA 90 bp | ACAGAATATGGTGCTGCCACTGCTTCCTTTGCTCCACGTGAAATATaGTCCCAGATTCCACCACTCAAAGAGAACCTCCCGTTGCCTATG | + |
|
Preference number: 6 (lower is better) Translates to: TEYGAATASFAPREI*SQIPPLKENLPLPM Trigger: CATAGGCAACGGGAGGTTCTCTTTGAGTGGTGGAATCTGGGACAATATTTCACGTGGAGCAAAGGAAGCAGTGGCAGCACCATATTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065976.12 |
||
| CDS TCA 72 bp | GCTAAACGTGAAGCAGTAACAGGCTCCAGGATTGGATaGTGCCTGTTTGGGTTCCGAGCCAAGACAGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: AKREAVTGSRIG*CLFGFRAKTEY Trigger: ATATTCTGTCTTGGCTCGGAACCCAAACAGGCATCATCCAATCCTGGAGCCTGTTACTGCTTCACGTTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS GCA 72 bp | GCTCATCAACCATTTTCAGATCATTTACCTCGCTACTaGTCGTGCTGCCGAACACCTCCATGTCTTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AHQPFSDHLPRY*SCCRTPPCLLG Trigger: ACCAAGAAGACATGGAGGTGTTCGGCAGCACGAGCAGTAGCGAGGTAAATGATCTGAAAATGGTTGATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137712.9 |
||
| CDS CAA 90 bp | CCCTCTTCCATTGGCTCATCAACCATTTTCAGATCATTTACCTCTTaGCGTTCATGCTCCCGCATAACCGTTGCTGCGTTCTTCATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PSSIGSSTIFRSFTS*RSCSRITVAAFFMV Trigger: TACCATGAAGAACGCAGCAACGGTTATGCGGGAGCATGAACGCAAAGAGGTAAATGATCTGAAAATGGTTGATGAGCCAATGGAAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000138645.8 |
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| CDS TCA 72 bp | AAGCCAGTTGATGTTCGCTTTTTCATGTTCCGCCTCTaGGCTAAACGTGAAGCAGTAACAGGCTCCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: KPVDVRFFMFRL*AKREAVTGSRI Trigger: AATCCTGGAGCCTGTTACTGCTTCACGTTTAGCTCAGAGGCGGAACATGAAAAAGCGAACATCAACTGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
||
| CDS CAA 72 bp | CACAGGCAGCATCATATCCCTCAGGTGCTACAAAGTTaGCGGTGTAGCACGGAGTTAACAGAAGTCCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: HRQHHIPQVLQS*RCSTELTEVHF Trigger: AAAATGGACTTCTGTTAACTCCGTGCTACACCGCAAACTTTGTAGCACCTGAGGGATATGATGCTGCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113428.9 |
||
| CDS CAA 72 bp | ATTGGCTCATCAACCATTTTCAGATCATTTACCTCTTaGCGTTCATGCTCCCGCATAACCGTTGCTGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: IGSSTIFRSFTS*RSCSRITVAAF Trigger: GAACGCAGCAACGGTTATGCGGGAGCATGAACGCAAAGAGGTAAATGATCTGAAAATGGTTGATGAGCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000138645.8 |
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| CDS GCA 72 bp | TCAACCATTTTCAGATCATTTACCTCTTTGCGTTCATaGTCCCGCATAACCGTTGCTGCGTTCTTCATGGTA | + |
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Preference number: 6 (lower is better) Translates to: STIFRSFTSLRS*SRITVAAFFMV Trigger: TACCATGAAGAACGCAGCAACGGTTATGCGGGAGCATGAACGCAAAGAGGTAAATGATCTGAAAATGGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000123951.8 ENSMUST00000128819.8 ENSMUST00000132319.8 ENSMUST00000138645.8 |
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| CDS GCA 72 bp | ACCAAGAACCTTGAGCAAGTCAAACTGTGCGGGATCTaGTTTCTCGTATCCTTCTTTAACATGCTGTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: TKNLEQVKLCGI*FLVSFFNMLCN Trigger: ATTACACAGCATGTTAAAGAAGGATACGAGAAAGCAGATCCCGCACAGTTTGACTTGCTCAAGGTTCTTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000123213.8 ENSMUST00000128819.8 ENSMUST00000137712.9 ENSMUST00000138645.8 |
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| CDS TCA 72 bp | CTCCTTCTGACCCCAATCTATTTGCTGGATTCCTTTTaGATAACATCCTTAATAGACTTTGTGCTTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLLTPIYLLDSF*ITSLIDFVLQH Trigger: GTGCTGAAGCACAAAGTCTATTAAGGATGTTATTCAAAAGGAATCCAGCAAATAGATTGGGGTCAGAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS GCA 72 bp | CAAATTCCACATTGGAAGCTGAGTGTATGCATCGCTTaGAAACAGAATAAGAACCAATACCAATATCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: QIPHWKLSVCIA*KQNKNQYQYPL Trigger: AAGAGGATATTGGTATTGGTTCTTATTCTGTTTGCAAGCGATGCATACACTCAGCTTCCAATGTGGAATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS GCA 72 bp | GTCTTGGTTATTACATACAGCACATTACTAGCTTCCTaGTCTGAGAAACATTTCTTTTTGAGAATCCGATCC | + |
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Preference number: 6 (lower is better) Translates to: VLVITYSTLLAS*SEKHFFLRIRS Trigger: GGATCGGATTCTCAAAAAGAAATGTTTCTCAGAGCAGGAAGCTAGTAATGTGCTGTATGTAATAACCAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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| CDS CAA 90 bp | ACTTCTTCAACTCCTTCTGACCCCAATCTATTTGCTGGATTCCTTTaGAATAACATCCTTAATAGACTTTGTGCTTCAGCACTAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: TSSTPSDPNLFAGFL*NNILNRLCASALRN Trigger: ATTCCTTAGTGCTGAAGCACAAAGTCTATTAAGGATGTTATTCAAAAGGAATCCAGCAAATAGATTGGGGTCAGAAGGAGTTGAAGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065976.12 ENSMUST00000082034.13 ENSMUST00000096348.10 ENSMUST00000113428.9 ENSMUST00000137712.9 |
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