Pregenerated sensors for RPS6KA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031309Ensembl transcript IDs: ENSMUST00000033671.13, ENSMUST00000112493.8, ENSMUST00000156648.8
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTaGTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTA | + |
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Preference number: 1 (lower is better) Translates to: VPAGTVCACRCLSGT*YLSPELVLSADIMV Trigger: TACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR CCA 90 bp | AGCTGGACCAACAACTCTGGGATAAGTCCTAGAAACTGGCAGGGATaGGTGAAAGGTGGAAGACTTGAGGAGCCATTAAGTACAGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SWTNNSGISPRNWQG*VKGGRLEEPLSTVA Trigger: GGCCACTGTACTTAATGGCTCCTCAAGTCTTCCACCTTTCACCCATCCCTGCCAGTTTCTAGGACTTATCCCAGAGTTGTTGGTCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR CCA 90 bp | TTTTCGTTTCGGAGCTCCAGGGAAATCGAACTTGCTAACAATCACTaGAAGCGAGAAGAGAGGAAGCAGGAGCAGCAGCGTTATGGGTAC | + |
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Preference number: 1 (lower is better) Translates to: FSFRSSREIELANNH*KREERKQEQQRYGY Trigger: GTACCCATAACGCTGCTGCTCCTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGAGCTCCGAAACGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR TCA 90 bp | GAAACTACTGTAAATACCCACCATCCTCCCTCCAGACACTCGAACTaGCTCTTCCATATGCCAGCCTCACAGCATGTTGACTTTGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: ETTVNTHHPPSRHSN*LFHMPASQHVDFGS Trigger: AGACCCAAAGTCAACATGCTGTGAGGCTGGCATATGGAAGAGTCAGTTCGAGTGTCTGGAGGGAGGATGGTGGGTATTTACAGTAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR GCA 90 bp | ATACCCACCATCCTCCCTCCAGACACTCGAACTGACTCTTCCATATaGCAGCCTCACAGCATGTTGACTTTGGGTCTTGCTACATTTATT | + |
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Preference number: 1 (lower is better) Translates to: IPTILPPDTRTDSSI*QPHSMLTLGLATFI Trigger: AATAAATGTAGCAAGACCCAAAGTCAACATGCTGTGAGGCTGGCATATGGAAGAGTCAGTTCGAGTGTCTGGAGGGAGGATGGTGGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR TCA 90 bp | GCACTTGAAGTGCAGCCAGGGGCCATTGTGAAATCTGGTGACTACTaGAGTCAAAGGGGACATCATATGGCTATAAATCATCATCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: ALEVQPGAIVKSGDY*SQRGHHMAINHHQG Trigger: TCCCTGATGATGATTTATAGCCATATGATGTCCCCTTTGACTTCAGTAGTCACCAGATTTCACAATGGCCCCTGGCTGCACTTCAAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR TCA 90 bp | GATCCTCACAAGCACTTCATAACTATGACCACAGTGCCAAGCATCTaGTTCGATTACCCACCAACGAAAGGTACAGCACGTAAGAACCCT | + |
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Preference number: 1 (lower is better) Translates to: DPHKHFITMTTVPSI*FDYPPTKGTARKNP Trigger: AGGGTTCTTACGTGCTGTACCTTTCGTTGGTGGGTAATCGAATCAGATGCTTGGCACTGTGGTCATAGTTATGAAGTGCTTGTGAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR TCA 90 bp | TGTCCTGTTAACAGCTCTCTAGTTAGTCTGACAGAGCACCTGACTTaGGAACAAATGGACCAACCTGTGAAACAGATGGGGCGATATGTA | + |
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Preference number: 1 (lower is better) Translates to: CPVNSSLVSLTEHLT*EQMDQPVKQMGRYV Trigger: TACATATCGCCCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGACTAACTAGAGAGCTGTTAACAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR GCA 90 bp | CTCTGGTCCTTTCCCTATCAAATACATGCCTTCTTTAGACGCTTCTaGACCTACTCTCTGTTCAAATCCTTTCTAGGCTGCGAGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: LWSFPYQIHAFFRRF*TYSLFKSFLGCEYV Trigger: CACATACTCGCAGCCTAGAAAGGATTTGAACAGAGAGTAGGTGCAGAAGCGTCTAAAGAAGGCATGTATTTGATAGGGAAAGGACCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR CCA 90 bp | AAACATAAAAGCTGGACCAACAACTCTGGGATAAGTCCTAGAAACTaGCAGGGATGGGTGAAAGGTGGAAGACTTGAGGAGCCATTAAGT | + |
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Preference number: 1 (lower is better) Translates to: KHKSWTNNSGISPRN*QGWVKGGRLEEPLS Trigger: ACTTAATGGCTCCTCAAGTCTTCCACCTTTCACCCATCCCTGCCAGTTTCTAGGACTTATCCCAGAGTTGTTGGTCCAGCTTTTATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR TCA 90 bp | GAGGTAGGAAGTAGGCTCTCACTCCAACCCTTGCTATGCCCATTATaGACAGTTAAAGACTGGAATAAAAGTGGTACTTGTGAGACCTAT | + |
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Preference number: 1 (lower is better) Translates to: EVGSRLSLQPLLCPL*TVKDWNKSGTCETY Trigger: ATAGGTCTCACAAGTACCACTTTTATTCCAGTCTTTAACTGTTCATAATGGGCATAGCAAGGGTTGGAGTGAGAGCCTACTTCCTACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR GCA 90 bp | TCCTTCCCACTAATCTCTAGCCAAAATGTCATATACCTTGCTAGTTaGTCTGGGAAAAGTCATGGATATTTCATCAGCTTATCATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: SFPLISSQNVIYLAS*SGKSHGYFISLSCS Trigger: ACTGCATGATAAGCTGATGAAATATCCATGACTTTTCCCAGAGCAACTAGCAAGGTATATGACATTTTGGCTAGAGATTAGTGGGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR CCA 90 bp | ATGTACAATTTGAAAGAATTACATTCAATAGCTGTTCACTCAATCTaGCCATCTCTAAGGTTTGCCGACAATACTGTTAATCCAGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: MYNLKELHSIAVHSI*PSLRFADNTVNPGE Trigger: TTCACCTGGATTAACAGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATGTAATTCTTTCAAATTGTACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR TCA 90 bp | CACGTAAGAACCCTTGATATGGTACCTTGCTTGGGCTTCTGGCATGCCTTACTAAGCCAGGGGCCATTGTaGAATCTGGTGACTACTGAA | + |
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Preference number: 2 (lower is better) Translates to: HVRTLDMVPCLGFWHALLSQGPL*NLVTTE Trigger: TTCAGTAGTCACCAGATTTCACAATGGCCCCTGGCT...TAGTAAGGCATGCCAGAAGCCCAAGCAAGGTACCATATCAAGGGTTCTTACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGGAGCAGCAGCGTTATaGGTACCAGCTGGGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: HSIAVHSIWPSLRFADNTGAAAL*VPAGTV Trigger: CACTGTCCCAGCTGGTACCCATAACGCTGCTGCTCC...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR TCA 90 bp | CCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTCTGACAGAGCACCTGACTAAATGGACCAACCTGTaGAACAGATGGGGCGATATG | + |
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Preference number: 2 (lower is better) Translates to: PTSCPVNSSLVSLTEHLTKWTNL*NRWGDM Trigger: CATATCGCCCCATCTGTTTCACAGGTTGGTCCATTT...AGTCAGGTGCTCTGTCAGACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATCATGTTTCCATTTTCGTTTCGGAGCTCCAGGGAAATCGAACTTGCTAACAGCTGGGACAGTGTGTaGTTGCAGGTGTCTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: FIMFPFSFRSSREIELANSWDSV*LQVSLR Trigger: CCTGAGAGACACCTGCAAGCACACACTGTCCCAGCT...GTTAGCAAGTTCGATTTCCCTGGAGCTCCGAAACGAAAATGGAAACATGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTACAGAGCACCTGACTTaGGAACAAATGGACCAACCT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTPTSCPVNSSLVSTEHLT*EQMDQP Trigger: AGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGT...ACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR TCA 90 bp | GGAATGGAGACTATCAAAGTCATGTTGAATTGTGTGTTACTGGCCCCCACAATAACTGAATACTGCACTTaGAGTGCAGCCAGGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GMETIKVMLNCVLLAPTITEYCT*SAARGH Trigger: ATGGCCCCTGGCTGCACTTCAAGTGCAGTATTCAGT...TATTGTGGGGGCCAGTAACACACAATTCAACATGACTTTGATAGTCTCCATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR GCA 90 bp | ATAAGGCTCAAAGTATACATCCAGGTTAGTCACAGGAGTTGGGTCTTGCAGAGGGTGTTCCTGATTTCATaGCGTGCACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: IRLKVYIQVSHRSWVLQRVFLIS*RAHTHT Trigger: TGTGTGTGTGTGTGCACGGCATGAAATCAGGAACAC...CCTCTGCAAGACCCAACTCCTGTGACTAACCTGGATGTATACTTTGAGCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGTTATGGGTACCAGCTaGGACAGTGTGTGCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HSIAVHSIWPSLRFADNTVMGTS*DSVCLQ Trigger: CTGCAAGCACACACTGTCCCAGCTGGTACCCATAAC...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGAAATCTGATCCTCACAAGCACTTCATAACTATGACCACAGTGCCAAGCGGAGTGCAATGCACGTaGAACGTGGAAACTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: SVKSDPHKHFITMTTVPSGVQCT*NVETTV Trigger: TACAGTAGTTTCCACGTTTCACGTGCATTGCACTCC...GCTTGGCACTGTGGTCATAGTTATGAAGTGCTTGTGAGGATCAGATTTCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR GCA 90 bp | TATCAAATACATGCCTTCTTTAGACGCTTCTGCACCTACTCTCTGTTCAAATCCTGTCTCTCAGGTACGTaGTACCTGTCGCCAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: YQIHAFFRRFCTYSLFKSCLSGT*YLSPEL Trigger: AAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACA...GGATTTGAACAGAGAGTAGGTGCAGAAGCGTCTAAAGAAGGCATGTATTTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTAGCTGGGACAGTGTGTaGTTGCAGGTGTCTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LRERNPNKPQSLWTDFIGSWDSV*LQVSLR Trigger: CCTGAGAGACACCTGCAAGCACACACTGTCCCAGCT...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR GCA 90 bp | CACGTAAGAACCCTTGATATGGTACCTTGCTTGGGCTTCTGGCATGCCTTACTATTCATCAGCTTATCATaGAGTCCAAGGTTATATGGC | + |
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Preference number: 2 (lower is better) Translates to: HVRTLDMVPCLGFWHALLFISLS*SPRLYG Trigger: GCCATATAACCTTGGACTGCATGATAAGCTGATGAA...TAGTAAGGCATGCCAGAAGCCCAAGCAAGGTACCATATCAAGGGTTCTTACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | ATAAGGCTCAAAGTATACATCCAGGTTAGTCACAGGAGTTGGGTCTTGCAGAGGAGGATTAGCCTACTCTaGTCCTTTCCCTATCAAATA | + |
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Preference number: 2 (lower is better) Translates to: IRLKVYIQVSHRSWVLQRRISLL*SFPYQI Trigger: TATTTGATAGGGAAAGGACCAGAGTAGGCTAATCCT...CCTCTGCAAGACCCAACTCCTGTGACTAACCTGGATGTATACTTTGAGCCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR TCA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTGCTTGTGCTATCAGCTaGCATCATGGTACCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: LRERNPNKPQSLWTDFIGACAIS*HHGTKH Trigger: ATGTTTGGTACCATGATGTCAGCTGATAGCACAAGC...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR CCA 90 bp | GGATTAGCCTACTCTGGTCCTTTCCCTATCAAATACATGCCTTCTTTAGACGCTAAACATACAAAATGTTaGATGGCACAAGGGATACAG | + |
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Preference number: 2 (lower is better) Translates to: GLAYSGPFPIKYMPSLDAKHTKC*MAQGIQ Trigger: CTGTATCCCTTGTGCCATCCAACATTTTGTATGTTT...AGCGTCTAAAGAAGGCATGTATTTGATAGGGAAAGGACCAGAGTAGGCTAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | TCAGTGAAATCTGATCCTCACAAGCACTTCATAACTATGACCACAGTGCCAAGCACTTTAGCTCCTGGTTaGGTGATAATAAGAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVKSDPHKHFITMTTVPSTLAPG*VIIRRK Trigger: TTTCCTTCTTATTATCACCCAACCAGGAGCTAAAGT...GCTTGGCACTGTGGTCATAGTTATGAAGTGCTTGTGAGGATCAGATTTCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR CAA 90 bp | ATAGTAGAGGACTGCCAGGAAGAAATATATGACTTTAGCTCCTGGTaGGGTGATAATAAGAAGGAAAGGCATCATGGTGTTATGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: IVEDCQEEIYDFSSW*GDNKKERHHGVMRK Trigger: TTTCCTCATAACACCATGATGCCTTTCCTTCTTATTATCACCCAACCAGGAGCTAAAGTCATATATTTCTTCCTGGCAGTCCTCTACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAATACCACAGTCTCAAGAAACTGAATTCACTCCTTCATTAATTGGTCTCCATTGTGAAATCTGGTaGCTACTGAAGTCAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CRIPQSQETEFTPSLIGLHCEIW*LLKSKG Trigger: CCCCTTTGACTTCAGTAGTCACCAGATTTCACAATG...GAGACCAATTAATGAAGGAGTGAATTCAGTTTCTTGAGACTGTGGTATTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR GCA 90 bp | TTACAAAACCTGTTCTGTGACAGGAATACAAGCAATATTGTTCCAGGATTATTCATGTATTGGGGCACATaGCTGCTGAGGGAAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LQNLFCDRNTSNIVPGLFMYWGT*LLREVK Trigger: TTTAACTTCCCTCAGCAGGCATGTGCCCCAATACAT...GAATAATCCTGGAACAATATTGCTTGTATTCCTGTCACAGAACAGGTTTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | TTACAAAACCTGTTCTGTGACAGGAATACAAGCAATATTGTTCCAGGATTATTCCCACCAATGATCTCTTaGGGGAGATCAGCAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LQNLFCDRNTSNIVPGLFPPMIS*GRSAKC Trigger: ACATTTTGCTGATCTCCCCCAAGAGATCATTGGTGG...GAATAATCCTGGAACAATATTGCTTGTATTCCTGTCACAGAACAGGTTTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAATACCACAGTCTCAAGAAACTGAATTCACTCCTTCATTAATTGGTCTCATACAAAATGTTGGATaGCACAAGGGATACAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CRIPQSQETEFTPSLIGLIQNVG*HKGYSA Trigger: AGCACTGTATCCCTTGTGCCATCCAACATTTTGTAT...GAGACCAATTAATGAAGGAGTGAATTCAGTTTCTTGAGACTGTGGTATTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | TATCAAATACATGCCTTCTTTAGACGCTTCTGCACCTACTCTCTGTTCAAATCCTTATATGGAGGCCTGTaGCCTTTATTACATTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: YQIHAFFRRFCTYSLFKSLYGGL*PLLHSN Trigger: ATTTGAATGTAATAAAGGCCACAGGCCTCCATATAA...GGATTTGAACAGAGAGTAGGTGCAGAAGCGTCTAAAGAAGGCATGTATTTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | TGTAGAATACCACAGTCTCAAGAAACTGAATTCACTCCTTCATTAATTGGTCTCGTGAAACATAAAAGCTaGACCAACAACTCTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: CRIPQSQETEFTPSLIGLVKHKS*TNNSGI Trigger: TATCCCAGAGTTGTTGGTCCAGCTTTTATGTTTCAC...GAGACCAATTAATGAAGGAGTGAATTCAGTTTCTTGAGACTGTGGTATTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CCA 90 bp | CAGATGGGGCGATATGTACAATTTGAAAGAATTACATTCAATAGCTGTTCACTCAAACATACAAAATGTTaGATGGCACAAGGGATACAG | + |
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Preference number: 2 (lower is better) Translates to: QMGRYVQFERITFNSCSLKHTKC*MAQGIQ Trigger: CTGTATCCCTTGTGCCATCCAACATTTTGTATGTTT...GAGTGAACAGCTATTGAATGTAATTCTTTCAAATTGTACATATCGCCCCATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAAAACCTGTTCTGTGACAGGAATACAAGCAATATTGTTCCAGGATTATTCTTGCTATGCCCATTATaGACAGTTAAAGACTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LQNLFCDRNTSNIVPGLFLLCPL*TVKDWN Trigger: ATTCCAGTCTTTAACTGTTCATAATGGGCATAGCAA...GAATAATCCTGGAACAATATTGCTTGTATTCCTGTCACAGAACAGGTTTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR GCA 72 bp | GGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTaGTACCTGTCGCCAGAGCTTGTGCTATCAGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: GTVCACRCLSGT*YLSPELVLSAD Trigger: GTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR GCA 72 bp | AGCAGCAGCGTTATGGGTACCAGCTGGGACAGTGTGTaGTTGCAGGTGTCTCTCAGGTACGTGCTACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SSSVMGTSWDSV*LQVSLRYVLPV Trigger: GACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR GCA 72 bp | GTCTCTCAGGTACGTGCTACCTGTCGCCAGAGCTTGTaGTATCAGCTGACATCATGGTACCAAACATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: VSQVRATCRQSL*YQLTSWYQTSH Trigger: GTGAGATGTTTGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR-3UTR CAA 90 bp | CCACAGTGCCAAGCATCTGATTCGATTACCCACCAACGAAAGGTACAGCACGTACAGCCTCACAGCATGTaGACTTTGGGTCTTGCTACA | + |
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Preference number: 3 (lower is better) Translates to: PQCQASDSITHQRKVQHVQPHSM*TLGLAT Trigger: TGTAGCAAGACCCAAAGTCAACATGCTGTGAGGCTG...TACGTGCTGTACCTTTCGTTGGTGGGTAATCGAATCAGATGCTTGGCACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR TCA 72 bp | TACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTaGCATCATGGTACCAAACATCTCACTGAGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: YVLPVARACAIS*HHGTKHLTEVT Trigger: AGTGACCTCAGTGAGATGTTTGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| 3UTR TCA 72 bp | TACCCACCAACGAAAGGTACAGCACGTAAGAACCCTTaGTATGGTACCTTGCTTGGGCTTCTGGCATGCCTT | + |
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Preference number: 3 (lower is better) Translates to: YPPTKGTARKNP*YGTLLGLLACL Trigger: AAGGCATGCCAGAAGCCCAAGCAAGGTACCATATCAAGGGTTCTTACGTGCTGTACCTTTCGTTGGTGGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CAA 90 bp | CCACAGTGCCAAGCATCTGATTCGATTACCCACCAACGAAAGGTACAGCACGTACAAAGTCATGTTGAATaGTGTGTTACTGGCCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: PQCQASDSITHQRKVQHVQSHVE*CVTGPH Trigger: GTGGGGGCCAGTAACACACAATTCAACATGACTTTG...TACGTGCTGTACCTTTCGTTGGTGGGTAATCGAATCAGATGCTTGGCACTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
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| 3UTR-3UTR CAA 90 bp | CCACAGTGCCAAGCATCTGATTCGATTACCCACCAACGAAAGGTACAGCACGTAGAGAGCTGGCTGTTTTaGATCCTTTGCATTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PQCQASDSITHQRKVQHVESWLF*ILCIPE Trigger: CTCTGGAATGCAAAGGATCAAAAACAGCCAGCTCTC...TACGTGCTGTACCTTTCGTTGGTGGGTAATCGAATCAGATGCTTGGCACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGTGCCAAGCATCTGATTCGATTACCCACCAACGAAAGGTACAGCACGTATCCACCAATGATCTCTaGGGGGAGATCAGCAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: PQCQASDSITHQRKVQHVSTNDL*GEISKM Trigger: CATTTTGCTGATCTCCCCCAAGAGATCATTGGTGGA...TACGTGCTGTACCTTTCGTTGGTGGGTAATCGAATCAGATGCTTGGCACTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR GCA 72 bp | CTATGGACTGACTTCATAGGTGTGTTCCTGATTTCATaGCGTGCACACACACACACACACACCAACTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LWTDFIGVFLIS*RAHTHTHTNFL Trigger: CAGGAAGTTGGTGTGTGTGTGTGTGTGTGCACGGCATGAAATCAGGAACACACCTATGAAGTCAGTCCATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR GCA 72 bp | TTCTGCACCTACTCTCTGTTCAAATCCTTTCTAGGCTaGGAGTATGTGCATAGCTTAGAGGACAACCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FCTYSLFKSFLG*EYVHSLEDNPH Trigger: GTGGGGGTTGTCCTCTAAGCTATGCACATACTCGCAGCCTAGAAAGGATTTGAACAGAGAGTAGGTGCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR-3UTR CAA 90 bp | GTGCACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTCCAGGGAAATCGAACTaGCTAACAATCACTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VHTHTHTPTSCPVNSSLVPGKSN*LTITGS Trigger: GCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGG...AACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTCTGACAGAGCACCTGACTCCAGGGAAATCGAACTaGCTAACAATCACTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PTSCPVNSSLVSLTEHLTPGKSN*LTITGS Trigger: GCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGG...AGTCAGGTGCTCTGTCAGACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTACCTGTCGCCAGAGCTaGTGCTATCAGCTGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: HSIAVHSIWPSLRFADNTTCRQS*CYQLTS Trigger: TGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGT...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR TCA 72 bp | AACAGCTCTCTAGTTAGTCTGACAGAGCACCTGACTTaGGAACAAATGGACCAACCTGTGAAACAGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: NSSLVSLTEHLT*EQMDQPVKQMG Trigger: CCCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGACTAACTAGAGAGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR GCA 72 bp | AAGGTACAGCACGTAAGAACCCTTGATATGGTACCTTaGTTGGGCTTCTGGCATGCCTTACTAGGGATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KVQHVRTLDMVP*LGFWHALLGIN Trigger: GTTTATCCCTAGTAAGGCATGCCAGAAGCCCAAGCAAGGTACCATATCAAGGGTTCTTACGTGCTGTACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR CCA 72 bp | AACAACTCTGGGATAAGTCCTAGAAACTGGCAGGGATaGGTGAAAGGTGGAAGACTTGAGGAGCCATTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NNSGISPRNWQG*VKGGRLEEPLS Trigger: ACTTAATGGCTCCTCAAGTCTTCCACCTTTCACCCATCCCTGCCAGTTTCTAGGACTTATCCCAGAGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR GCA 72 bp | AAGTATACATCCAGGTTAGTCACAGGAGTTGGGTCTTaGAGAGGAACAGATAGAGTTAGACTGGACCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KYTSRLVTGVGS*RGTDRVRLDLP Trigger: AGGAAGGTCCAGTCTAACTCTATCTGTTCCTCTGCAAGACCCAACTCCTGTGACTAACCTGGATGTATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR CCA 72 bp | AACAGTTGGAAAATCGTTGACCCCCACCCTATTCTTTaGAGTGCAATGCACGTGAAACGTGGAAACTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: NSWKIVDPHPIL*SAMHVKRGNYC Trigger: ACAGTAGTTTCCACGTTTCACGTGCATTGCACTCCAAAGAATAGGGTGGGGGTCAACGATTTTCCAACTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTACCTGTCGCCAGAGCTaGTGCTATCAGCTGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: LRERNPNKPQSLWTDFIGTCRQS*CYQLTS Trigger: TGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGT...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTGAAATCTGATCCTCACAAGCACTTCATAACTATGACCACAGTGCCAAGCATCATTTTGTGTTGCTaGGGCAAAGGGGGTATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVKSDPHKHFITMTTVPSIILCC*GKGGIR Trigger: TCTGATACCCCCTTTGCCCAAGCAACACAAAATGAT...GCTTGGCACTGTGGTCATAGTTATGAAGTGCTTGTGAGGATCAGATTTCACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGGCTCAAAGTATACATCCAGGTTAGTCACAGGAGTTGGGTCTTGCAGAGGGACTTTAGCTCCTGGTaGGGTGATAATAAGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IRLKVYIQVSHRSWVLQRDFSSW*GDNKKE Trigger: TTCCTTCTTATTATCACCCAACCAGGAGCTAAAGTC...CCTCTGCAAGACCCAACTCCTGTGACTAACCTGGATGTATACTTTGAGCCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR CCA 72 bp | GCCTTTTGCAACTATCACCCCAGGATTAGCCTACTCTaGTCCTTTCCCTATCAAATACATGCCTTCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: AFCNYHPRISLL*SFPYQIHAFFR Trigger: TCTAAAGAAGGCATGTATTTGATAGGGAAAGGACCAGAGTAGGCTAATCCTGGGGTGATAGTTGCAAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR GCA 72 bp | TTTCCCTATCAAATACATGCCTTCTTTAGACGCTTCTaGACCTACTCTCTGTTCAAATCCTTTCTAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FPYQIHAFFRRF*TYSLFKSFLGC Trigger: GCAGCCTAGAAAGGATTTGAACAGAGAGTAGGTGCAGAAGCGTCTAAAGAAGGCATGTATTTGATAGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGGCTCAAAGTATACATCCAGGTTAGTCACAGGAGTTGGGTCTTGCAGAGGAAAACATACAAAATGTaGGATGGCACAAGGGATACA | + |
|
Preference number: 3 (lower is better) Translates to: IRLKVYIQVSHRSWVLQRKTYKM*DGTRDT Trigger: TGTATCCCTTGTGCCATCCAACATTTTGTATGTTTT...CCTCTGCAAGACCCAACTCCTGTGACTAACCTGGATGTATACTTTGAGCCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAATACATGCCTTCTTTAGACGCTTCTGCACCTACTCTCTGTTCAAATCCTATGCAGTCATCATTTaGTGTTGCTTGGGCAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: YQIHAFFRRFCTYSLFKSYAVII*CCLGKG Trigger: CCCTTTGCCCAAGCAACACAAAATGATGACTGCATA...GGATTTGAACAGAGAGTAGGTGCAGAAGCGTCTAAAGAAGGCATGTATTTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR TCA 72 bp | AATGAAACTAGAAACTACCAAGTTAGATGTGAATACTaGATACTGCACTTGAAGTGCAGCCAGGGGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: NETRNYQVRCEY*ILHLKCSQGPL Trigger: CAATGGCCCCTGGCTGCACTTCAAGTGCAGTATTCAGTATTCACATCTAACTTGGTAGTTTCTAGTTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR GCA 72 bp | CTGTTTTTGATCCTTTGCATTCCAGAGCTCTCTGTCTaGTTTCCCAAGTCTCAAATTTTCAACACCATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LFLILCIPELSV*FPKSQIFNTIV Trigger: TACTATGGTGTTGAAAATTTGAGACTTGGGAAAGCAGACAGAGAGCTCTGGAATGCAAAGGATCAAAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGAATACCACAGTCTCAAGAAACTGAATTCACTCCTTCATTAATTGGTCTCCACAGCATGTTGACTTaGGGTCTTGCTACATTTATT | + |
|
Preference number: 3 (lower is better) Translates to: CRIPQSQETEFTPSLIGLHSMLT*GLATFI Trigger: AATAAATGTAGCAAGACCCAAAGTCAACATGCTGTG...GAGACCAATTAATGAAGGAGTGAATTCAGTTTCTTGAGACTGTGGTATTCTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR GCA 72 bp | TGTCAGAATGCATTTCTATTGTCTGGGATATTATTTTaGATTGTAAACCAAGAGATGTCTGTACAGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CQNAFLLSGILF*IVNQEMSVQRP Trigger: AGGCCTCTGTACAGACATCTCTTGGTTTACAATGCAAAATAATATCCCAGACAATAGAAATGCATTCTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR GCA 72 bp | CTAATCTCTAGCCAAAATGTCATATACCTTGCTAGTTaGTCTGGGAAAAGTCATGGATATTTCATCAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LISSQNVIYLAS*SGKSHGYFISL Trigger: TAAGCTGATGAAATATCCATGACTTTTCCCAGAGCAACTAGCAAGGTATATGACATTTTGGCTAGAGATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR CCA 72 bp | TTGAAAGAATTACATTCAATAGCTGTTCACTCAATCTaGCCATCTCTAAGGTTTGCCGACAATACTGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: LKELHSIAVHSI*PSLRFADNTVN Trigger: ATTAACAGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATGTAATTCTTTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR GCA 72 bp | ATCATAGTTTCCAGTGTGTGCTTGACTATGTCAGAATaGATTTCTATTGTCTGGGATATTATTTTGCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: IIVSSVCLTMSE*ISIVWDIILHC Trigger: ACAATGCAAAATAATATCCCAGACAATAGAAATGCATTCTGACATAGTCAAGCACACACTGGAAACTATGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR CCA 72 bp | GACTTAATTACTAGAACTTTTAAAGAACTGTCACGTTaGAACCAGTTACAAGTCACTTGGCAACACAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: DLITRTFKELSR*NQLQVTWQHKI Trigger: TATTTTGTGTTGCCAAGTGACTTGTAACTGGTTCCAACGTGACAGTTCTTTAAAAGTTCTAGTAATTAAGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CCA 90 bp | TATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTTCCGCTGAGCAAGAGTaGAGCGGCCCACTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YGYQLGQCVLAGVSQVRASAEQE*SGPLVP Trigger: TGGAACCAGTGGGCCGCTCCACTCTTGCTCAGCGGA...AGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR CAA 72 bp | AGCAGCGTTATGGGTACCAGCTGGGACAGTGTGTGCTaGCAGGTGTCTCTCAGGTACGTGCTACCTGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVMGTSWDSVC*QVSLRYVLPVA Trigger: GGCGACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGTCTCTCAGGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGCAATCCAAGGATGTCTaGGCACCAGAGCAGCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGVSQVRATCRQSLCYQLQSKDV*APEQPS Trigger: TGACGGCTGCTCTGGTGCTCAGACATCCTTGGATTG...CAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACACCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCGTTATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTAGCAGAGTACGTAGCTaGCATGGCACCCTTTACGAG | + |
|
Preference number: 4 (lower is better) Translates to: AALWVPAGTVCACRCLSGSRVRS*HGTLYE Trigger: CTCGTAAAGGGTGCCATGGCAGCTACGTACTCTGCT...ACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCGTTATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTGCTGGCCTCTCGCTCTaGGAAAAACTTCTGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AALWVPAGTVCACRCLSGAGLSL*EKLLSK Trigger: CTTAGACAGAAGTTTTTCTCAGAGCGAGAGGCCAGC...ACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGAAATCGAACTTGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGCAGTCCACAGCCATCTTCTaGCACGGGTCCGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SREIELANNHWKREERKQSTAIF*HGSASC Trigger: GCAGCTGGCGGACCCGTGGCAGAAGATGGCTGTGGA...CTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGTCTCTCAGGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGGGTAGTTGGTCCCAGTaGACAATCCAAGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGVSQVRATCRQSLCYQLGSWSQ*TIQGCL Trigger: CAGACATCCTTGGATTGTCCACTGGGACCAACTACC...CAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | GGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCAAGCAGAGTACGTAGCTaGCATGGCACCCTTTACGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTCYLSPELVLSADIMVPSRVRS*HGTLYE Trigger: CTCGTAAAGGGTGCCATGGCAGCTACGTACTCTGCT...TGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTACCTGTGGTAGTTGGTCCCAGTaGACAATCCAAGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YQLGQCVLAGVSQVRATCGSWSQ*TIQGCL Trigger: CAGACATCCTTGGATTGTCCACTGGGACCAACTACC...ACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GCTAACCCAGCACAAGCGCTACATCATCGGCTACATCTGCCCAACGACAATGTGAACCCCCGAAAAAGCTaGTGTGCGTTAGCACTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ANPAQALHHRLHLPNDNVNPRKS*CALALG Trigger: ACCTAGTGCTAACGCACATCAGCTTTTTCGGGGGTT...CACATTGTCGTTGGGCAGATGTAGCCGATGATGTAGCGCTTGTGCTGGGTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR TCA 90 bp | TACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTACCTGTCTTACAAACGGAGTATaGGCCAACGCCAATATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YQLGQCVLAGVSQVRATCLTNGV*ANANIL Trigger: GAGGATATTGGCGTTGGCTCATACTCCGTTTGTAAG...ACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | TACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTACCTGTAGACTGGGGACTGATTaGGGTTTAAAGCAGAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: YQLGQCVLAGVSQVRATCRLGTD*GLKQST Trigger: CGTACTCTGCTTTAAACCGCAATCAGTCCCCAGTCT...ACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTGCCTTCTTCAGTTTGTaGGTTAATCTCCTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YGYQLGQCVLAGVSQVRAAFFSL*VNLLLS Trigger: GGAGAGGAGGAGATTAACCCACAAACTGAAGAAGGC...AGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GTGCACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTCAATCCAAGGATGTCTaGGCACCAGAGCAGCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHTHTHTPTSCPVNSSLVQSKDV*APEQPS Trigger: TGACGGCTGCTCTGGTGCTCAGACATCCTTGGATTG...AACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTGCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | TACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTACCTGTCCGAAAAAGCTGATGTaGGTTAGCACTAGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YQLGQCVLAGVSQVRATCPKKLM*VSTRWN Trigger: ATTCCACCTAGTGCTAACGCACATCAGCTTTTTCGG...ACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGTCTCTCAGGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGATCATCAGGGCCATTTaGAAATGGAGTGTAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGVSQVRATCRQSLCYQLIIRAI*KWSVTS Trigger: ACTGGTTACACTCCATTTGCAAATGGCCCTGATGAT...CAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCGTTATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTATTCGTAAAAGACTCTaGGCTTCAGGACTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AALWVPAGTVCACRCLSGIRKRL*ASGLRN Trigger: GTTTCTGAGTCCTGAAGCCCAGAGTCTTTTACGAAT...ACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR CAA 72 bp | GGTGTCTCTCAGGTACGTGCTACCTGTCGCCAGAGCTaGTGCTATCAGCTGACATCATGGTACCAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GVSQVRATCRQS*CYQLTSWYQTS Trigger: AGATGTTTGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCGTTATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTAAGGTAGTGTACCAGTaGGCATTTCAAACATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AALWVPAGTVCACRCLSGKVVYQ*AFQTST Trigger: TGTTGATGTTTGAAATGCTCACTGGTACACTACCTT...ACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCATCCAGTAACCACCACTaGGTGAGAATTTTCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTCYLSPELVLSADIMVPSSNHH*VRIFHY Trigger: GTAGTGGAAAATTCTCACTCAGTGGTGGTTACTGGA...TGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | TATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTAAACTGGGAAGGATCTaGCTTTTCATGTCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YGYQLGQCVLAGVSQVRAKLGRI*LFMSFL Trigger: AAGGAAGGACATGAAAAGGCAGATCCTTCCCAGTTT...AGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | GGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCATGCACACCAACTGTCTaGATAGCTTGGCTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GTCYLSPELVLSADIMVPCTPTV*IAWLSS Trigger: TGATGAAAGCCAAGCTATGCAGACAGTTGGTGTGCA...TGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | GTGCACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTGCACCCTTTACGAGATaGGGCGCATCCTGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHTHTHTPTSCPVNSSLVAPFTR*GASCLF Trigger: AAACAGACAGGATGCGCCGCATCTCGTAAAGGGTGC...AACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTACCTGTAGGGCCATTTGCAAATaGAGTGTAACCAGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YQLGQCVLAGVSQVRATCRAICK*SVTSKH Trigger: ATGCTTACTGGTTACACTCCATTTGCAAATGGCCCT...ACAGGTAGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTACGTGCTTCCTGTCTGTTTAGTTaGTATTGTGGTAGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YGYQLGQCVLAGVSQVRASCLFS*YCGSWS Trigger: GGACCAACTACCACAATACCAACTAAACAGACAGGA...AGCACGTACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGAAATCGAACTTGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGCAGAGGTGGAATGCCCGGTaGATCTTTGGGAGTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SREIELANNHWKREERKQRWNAR*IFGSFC Trigger: GCAAAAACTCCCAAAGATTCACCGGGCATTCCACCT...CTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCGTTATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTAATTCGAATAGATTCTaGATTACCAGACTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AALWVPAGTVCACRCLSGNSNRF*ITRLIH Trigger: GTGGATGAGTCTGGTAATCCAGAATCTATTCGAATT...ACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR CAA 72 bp | GTGAGTCACAGAAGAGAGCTGGCTGTTTTTGATCCTTaGCATTCCAGAGCTCTCTGTCTGCTTTCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSHRRELAVFDP*HSRALCLLSQV Trigger: GACTTGGGAAAGCAGACAGAGAGCTCTGGAATGCAAAGGATCAAAAACAGCCAGCTCTCTTCTGTGACTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR TCA 90 bp | GGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCATTGCAGGATTCCGTTTaGAAAGCATTCGTAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTCYLSPELVLSADIMVPLQDSV*KAFVKD Trigger: GTCTTTTACGAATGCTTTTCAAACGGAATCCTGCAA...TGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGAGCACCTGACTTGAGAACAAATGGACCAACCTGTGAAACAGATGGGCTTACAAACGGAGTATaGGCCAACGCCAATATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDRAPDLRTNGPTCETDGLTNGV*ANANIL Trigger: GAGGATATTGGCGTTGGCTCATACTCCGTTTGTAAG...CCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GCTAACCCAGCACAAGCGCTACATCATCGGCTACATCTGCCCAACGACAATGTGTATAACAAGGAGTCATaGGAAGACCATTTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ANPAQALHHRLHLPNDNVYNKES*EDHFLL Trigger: GAGCAGAAAATGGTCTTCTCATGACTCCTTGTTATA...CACATTGTCGTTGGGCAGATGTAGCCGATGATGTAGCGCTTGTGCTGGGTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGAGCACCTGACTTGAGAACAAATGGACCAACCTGTGAAACAGATGGGGGTTCATCCATAATTTaGTGTCCATTCTCCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDRAPDLRTNGPTCETDGGSSII*CPFSAL Trigger: CAGCGCGGAGAATGGACAGCAAATTATGGATGAACC...CCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR GCA 90 bp | GCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCAAACATCTCCGAAAAAGCTGATGTaGGTTAGCACTAGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATCRQSLCYQLTSWYQTSPKKLM*VSTRWN Trigger: ATTCCACCTAGTGCTAACGCACATCAGCTTTTTCGG...AGATGTTTGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | GCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCAAACATCTGTGAACCACCCCTTGTaGATGAAGATACTCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATCRQSLCYQLTSWYQTSVNHPL*MKILNS Trigger: ACTGTTGAGTATCTTCATGCACAAGGGGTGGTTCAC...AGATGTTTGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGAGCACCTGACTTGAGAACAAATGGACCAACCTGTGAAACAGATGGGAGACTGGGGACTGATTaGGGTTTAAAGCAGAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: SDRAPDLRTNGPTCETDGRLGTD*GLKQST Trigger: CGTACTCTGCTTTAAACCGCAATCAGTCCCCAGTCT...CCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTTCCGCTGAGCAAGAGTaGAGCGGCCCACTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRERNPNKPQSLWTDFIGSAEQE*SGPLVP Trigger: TGGAACCAGTGGGCCGCTCCACTCTTGCTCAGCGGA...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGAAATCGAACTTGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGCAGTCCAGTAACCACCACTaGGTGAGAATTTTCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SREIELANNHWKREERKQSSNHH*VRIFHY Trigger: GTAGTGGAAAATTCTCACTCAGTGGTGGTTACTGGA...CTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGAAATCGAACTTGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGCAGTACATGAAGCATCTTTaGCACCAGGTCCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SREIELANNHWKREERKQYMKHL*HQVLCC Trigger: ACAGCAAAGGACCTGGTGTCAAAGATGCTTCATGTA...CTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR CAA 72 bp | TTCCATTTTCGTTTCGGAGCTCCAGGGAAATCGAACTaGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHFRFGAPGKSN*LTITGSEKRGS Trigger: GCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGAGCTCCGAAACGAAAATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTAGGTGGAATGCCCGGTaGATCTTTGGGAGTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSIAVHSIWPSLRFADNTRWNAR*IFGSFC Trigger: GCAAAAACTCCCAAAGATTCACCGGGCATTCCACCT...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGTAACCCCCGAAAAAGCTaGTGTGCGTTAGCACTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FNSCSLNLAISKVCRQYCNPRKS*CALALG Trigger: ACCTAGTGCTAACGCACATCAGCTTTTTCGGGGGTT...ACAGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGCTGGCCTCTCGCTCTaGGAAAAACTTCTGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSIAVHSIWPSLRFADNTAGLSL*EKLLSK Trigger: CTTAGACAGAAGTTTTTCTCAGAGCGAGAGGCCAGC...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | CACGTAAGAACCCTTGATATGGTACCTTGCTTGGGCTTCTGGCATGCCTTACTAGTAACCACCACTGAGTaGGAATTTTCCACTACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HVRTLDMVPCLGFWHALLVTTTE*EFSTTY Trigger: ATAGGTAGTGGAAAATTCTCACTCAGTGGTGGTTAC...TAGTAAGGCATGCCAGAAGCCCAAGCAAGGTACCATATCAAGGGTTCTTACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR GCA 90 bp | GAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTGTGTTCGCACCCTTTACGAGATaGGGCGCATCCTGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERNPNKPQSLWTDFIGVFAPFTR*GASCLF Trigger: AAACAGACAGGATGCGCCGCATCTCGTAAAGGGTGC...GAACACACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTGAAATCTGATCCTCACAAGCACTTCATAACTATGACCACAGTGCCAAGCGCCTTCTTCAGTTTGTaGGTTAATCTCCTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVKSDPHKHFITMTTVPSAFFSL*VNLLLS Trigger: GGAGAGGAGGAGATTAACCCACAAACTGAAGAAGGC...GCTTGGCACTGTGGTCATAGTTATGAAGTGCTTGTGAGGATCAGATTTCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGAAATCGAACTTGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGCAGATTCGTAAAAGACTCTaGGCTTCAGGACTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SREIELANNHWKREERKQIRKRL*ASGLRN Trigger: GTTTCTGAGTCCTGAAGCCCAGAGTCTTTTACGAAT...CTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACAGAGCACCTGACTTGAGAACAAATGGACCAACCTGTGAAACAGATGGGACTGTCTGCATAGCTTaGCTTTCATCATCTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SDRAPDLRTNGPTCETDGTVCIA*LSSSEV Trigger: TACCTCAGATGATGAAAGCCAAGCTATGCAGACAGT...CCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | CACGTAAGAACCCTTGATATGGTACCTTGCTTGGGCTTCTGGCATGCCTTACTAAGGGCCATTTGCAAATaGAGTGTAACCAGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVRTLDMVPCLGFWHALLRAICK*SVTSKH Trigger: ATGCTTACTGGTTACACTCCATTTGCAAATGGCCCT...TAGTAAGGCATGCCAGAAGCCCAAGCAAGGTACCATATCAAGGGTTCTTACGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGAGCACCTGACTTGAGAACAAATGGACCAACCTGTGAAACAGATGGGTGTCCTTCCTTCACATaGTGTGTGATTGCAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDRAPDLRTNGPTCETDGCPSFT*CVIAIS Trigger: AGAAATTGCAATCACACATCATGTGAAGGAAGGACA...CCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GGATTAGCCTACTCTGGTCCTTTCCCTATCAAATACATGCCTTCTTTAGACGCTACCACCCCTTGTGCATaGAGATACTCAACAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLAYSGPFPIKYMPSLDATTPCA*RYSTVL Trigger: CAAAACTGTTGAGTATCTTCATGCACAAGGGGTGGT...AGCGTCTAAAGAAGGCATGTATTTGATAGGGAAAGGACCAGAGTAGGCTAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR TCA 90 bp | CCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTCTGACAGAGCACCTGACTTATAACAAGGAGTCATaGGAAGACCATTTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTSCPVNSSLVSLTEHLTYNKES*EDHFLL Trigger: GAGCAGAAAATGGTCTTCTCATGACTCCTTGTTATA...AGTCAGGTGCTCTGTCAGACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTTCCTGTCTGTTTAGTTaGTATTGTGGTAGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTPTSCPVNSSLVSSCLFS*YCGSWS Trigger: GGACCAACTACCACAATACCAACTAAACAGACAGGA...ACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGTACCACCCCTTGTGCATaGAGATACTCAACAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSCSLNLAISKVCRQYCTTPCA*RYSTVL Trigger: CAAAACTGTTGAGTATCTTCATGCACAAGGGGTGGT...ACAGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | GCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCAAACATCTTGGTGCAACAAAATTTaGAGTATAACAAGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATCRQSLCYQLTSWYQTSWCNKI*SITRSH Trigger: ATGACTCCTTGTTATACTGCAAATTTTGTTGCACCA...AGATGTTTGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTTGCAGGCTTAAAAGGTaGGTGAATCTCTCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTPTSCPVNSSLVSCRLKR*VNLSSI Trigger: TATAGAAGAGAGATTCACCCACCTTTTAAGCCTGCA...ACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACAGAGCACCTGACTTGAGAACAAATGGACCAACCTGTGAAACAGATGGGAATTCGAATAGATTCTaGATTACCAGACTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDRAPDLRTNGPTCETDGNSNRF*ITRLIH Trigger: GTGGATGAGTCTGGTAATCCAGAATCTATTCGAATT...CCCATCTGTTTCACAGGTTGGTCCATTTGTTCTCAAGTCAGGTGCTCTGTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTTCAGTTAACTTGATGTaGCCTTCTTCATCAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTPTSCPVNSSLVSSVNLM*PSSSRS Trigger: ACTTCTTGATGAAGAAGGTCACATCAAGTTAACTGA...ACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TTCATCATGTTTCCATTTTCGTTTCGGAGCTCCAGGGAAATCGAACTTGCTAACGTAACCACCACTGAGTaGGAATTTTCCACTACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FIMFPFSFRSSREIELANVTTTE*EFSTTY Trigger: ATAGGTAGTGGAAAATTCTCACTCAGTGGTGGTTAC...GTTAGCAAGTTCGATTTCCCTGGAGCTCCGAAACGAAAATGGAAACATGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTGTGTTCTACATGAAGCATCTTTaGCACCAGGTCCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERNPNKPQSLWTDFIGVFYMKHL*HQVLCC Trigger: ACAGCAAAGGACCTGGTGTCAAAGATGCTTCATGTA...GAACACACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | TTCATCATGTTTCCATTTTCGTTTCGGAGCTCCAGGGAAATCGAACTTGCTAACAAACTGGGAAGGATCTaGCTTTTCATGTCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIMFPFSFRSSREIELANKLGRI*LFMSFL Trigger: AAGGAAGGACATGAAAAGGCAGATCCTTCCCAGTTT...GTTAGCAAGTTCGATTTCCCTGGAGCTCCGAAACGAAAATGGAAACATGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTCTGACAGAGCACCTGACTTGGTGCAACAAAATTTaGAGTATAACAAGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTSCPVNSSLVSLTEHLTWCNKI*SITRSH Trigger: ATGACTCCTTGTTATACTGCAAATTTTGTTGCACCA...AGTCAGGTGCTCTGTCAGACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGTACTGTCTGCATAGCTTaGCTTTCATCATCTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FNSCSLNLAISKVCRQYCTVCIA*LSSSEV Trigger: TACCTCAGATGATGAAAGCCAAGCTATGCAGACAGT...ACAGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTGTGTTCTGGTATTGTGGTAGTTaGTCCCAGTGGACAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERNPNKPQSLWTDFIGVFWYCGS*SQWTIQ Trigger: TTGGATTGTCCACTGGGACCAACTACCACAATACCA...GAACACACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR CAA 72 bp | GACTGCCAGGAAGAAATATATGACTTTAGCTCCTGGTaGGGTGATAATAAGAAGGAAAGGCATCATGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DCQEEIYDFSSW*GDNKKERHHGV Trigger: AACACCATGATGCCTTTCCTTCTTATTATCACCCAACCAGGAGCTAAAGTCATATATTTCTTCCTGGCAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| 3UTR CAA 72 bp | CGAACTGACTCTTCCATATGCCAGCCTCACAGCATGTaGACTTTGGGTCTTGCTACATTTATTTTTAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: RTDSSICQPHSM*TLGLATFIFRL Trigger: AAGTCTAAAAATAAATGTAGCAAGACCCAAAGTCAACATGCTGTGAGGCTGGCATATGGAAGAGTCAGTTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR GCA 90 bp | GAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTGTGTTCATCATCAGGGCCATTTaGAAATGGAGTGTAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERNPNKPQSLWTDFIGVFIIRAI*KWSVTS Trigger: ACTGGTTACACTCCATTTGCAAATGGCCCTGATGAT...GAACACACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTGCGGTTAACTACTTCTaGAGCCATGTATTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRERNPNKPQSLWTDFIGAVNYF*SHVFHS Trigger: ACTGTGGAATACATGGCTCCAGAAGTAGTTAACCGC...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTTTACGATCTTTTCCTTaGAAAGGTAGTGTACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSIAVHSIWPSLRFADNTLRSFP*KGSVPV Trigger: CACTGGTACACTACCTTTCCAAGGAAAAGATCGTAA...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTTGGTATTGTGGTAGTTaGTCCCAGTGGACAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRERNPNKPQSLWTDFIGWYCGS*SQWTIQ Trigger: TTGGATTGTCCACTGGGACCAACTACCACAATACCA...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTTTGACAATGAAAGGGTaGTTGACTTCTACCAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: HSIAVHSIWPSLRFADNTLTMKG*LTSTKI Trigger: TATCTTGGTAGAAGTCAATCACCCTTTCATTGTCAA...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TTCATCATGTTTCCATTTTCGTTTCGGAGCTCCAGGGAAATCGAACTTGCTAACTTGACAATGAAAGGGTaGTTGACTTCTACCAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: FIMFPFSFRSSREIELANLTMKG*LTSTKI Trigger: TATCTTGGTAGAAGTCAATCACCCTTTCATTGTCAA...GTTAGCAAGTTCGATTTCCCTGGAGCTCCGAAACGAAAATGGAAACATGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR TCA 90 bp | TATCAAATACATGCCTTCTTTAGACGCTTCTGCACCTACTCTCTGTTCAAATCCTTGCAGGATTCCGTTTaGAAAGCATTCGTAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YQIHAFFRRFCTYSLFKSLQDSV*KAFVKD Trigger: GTCTTTTACGAATGCTTTTCAAACGGAATCCTGCAA...GGATTTGAACAGAGAGTAGGTGCAGAAGCGTCTAAAGAAGGCATGTATTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR TCA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTTGTCCTTCCTTCACATaGTGTGTGATTGCAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRERNPNKPQSLWTDFIGCPSFT*CVIAIS Trigger: AGAAATTGCAATCACACATCATGTGAAGGAAGGACA...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGGGGCGATATGTACAATTTGAAAGAATTACATTCAATAGCTGTTCACTCCCATGTATTCCACAGTaGCACAAAAAGAATAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QMGRYVQFERITFNSCSLPCIPQ*HKKNKP Trigger: AGGCTTATTCTTTTTGTGGCACTGTGGAATACATGG...GAGTGAACAGCTATTGAATGTAATTCTTTCAAATTGTACATATCGCCCCATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGGGCGATATGTACAATTTGAAAGAATTACATTCAATAGCTGTTCACTCTTACGATCTTTTCCTTaGAAAGGTAGTGTACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QMGRYVQFERITFNSCSLLRSFP*KGSVPV Trigger: CACTGGTACACTACCTTTCCAAGGAAAAGATCGTAA...GAGTGAACAGCTATTGAATGTAATTCTTTCAAATTGTACATATCGCCCCATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGGGCGATATGTACAATTTGAAAGAATTACATTCAATAGCTGTTCACTCTGCAGGCTTAAAAGGTaGGTGAATCTCTCTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: QMGRYVQFERITFNSCSLCRLKR*VNLSSI Trigger: TATAGAAGAGAGATTCACCCACCTTTTAAGCCTGCA...GAGTGAACAGCTATTGAATGTAATTCTTTCAAATTGTACATATCGCCCCATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| 3UTR CAA 72 bp | ATGTCAGAATGCATTTCTATTGTCTGGGATATTATTTaGCATTGTAAACCAAGAGATGTCTGTACAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MSECISIVWDII*HCKPRDVCTEA Trigger: GGCCTCTGTACAGACATCTCTTGGTTTACAATGCAAAATAATATCCCAGACAATAGAAATGCATTCTGACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR TCA 90 bp | TTACAAAACCTGTTCTGTGACAGGAATACAAGCAATATTGTTCCAGGATTATTCAAGGTAGTGTACCAGTaGGCATTTCAAACATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQNLFCDRNTSNIVPGLFKVVYQ*AFQTST Trigger: TGTTGATGTTTGAAATGCTCACTGGTACACTACCTT...GAATAATCCTGGAACAATATTGCTTGTATTCCTGTCACAGAACAGGTTTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS CCA 90 bp | GGCGCATCCTGTCTGTTTAGTTGGTATTGTGGTAGTTGGTCCCAGTaGACAATCCAAGGATGTCTGAGCACCAGAGCAGCCGTCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GASCLFSWYCGSWSQ*TIQGCLSTRAAVSL Trigger: GAGACTGACGGCTGCTCTGGTGCTCAGACATCCTTGGATTGTCCACTGGGACCAACTACCACAATACCAACTAAACAGACAGGATGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS CCA 90 bp | ACGAGATGCGGCGCATCCTGTCTGTTTAGTTGGTATTGTGGTAGTTaGTCCCAGTGGACAATCCAAGGATGTCTGAGCACCAGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRCGASCLFSWYCGS*SQWTIQGCLSTRAA Trigger: GGCTGCTCTGGTGCTCAGACATCCTTGGATTGTCCACTGGGACCAACTACCACAATACCAACTAAACAGACAGGATGCGCCGCATCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS CCA 90 bp | GCCATGGCACCCTTTACGAGATGCGGCGCATCCTGTCTGTTTAGTTaGTATTGTGGTAGTTGGTCCCAGTGGACAATCCAAGGATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AMAPFTRCGASCLFS*YCGSWSQWTIQGCL Trigger: CAGACATCCTTGGATTGTCCACTGGGACCAACTACCACAATACCAACTAAACAGACAGGATGCGCCGCATCTCGTAAAGGGTGCCATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | GCTAACCCAGCACAAGCGCTACATCATCGGCTACATCTGCCCAACGACAATGTGTTGACACCAGGTCCTTaGCTGTGTCTGAAACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ANPAQALHHRLHLPNDNVLTPGP*LCLKQN Trigger: ATTCTGTTTCAGACACAGCAAAGGACCTGGTGTCAA...CACATTGTCGTTGGGCAGATGTAGCCGATGATGTAGCGCTTGTGCTGGGTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGTCTCTCAGGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGTCTGTTGGGTCTCTCTaGCTTTTATCAATAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGVSQVRATCRQSLCYQLSVGSL*LLSIIF Trigger: GAAGATTATTGATAAAAGCAAGAGAGACCCAACAGA...CAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACCTGAGAGACACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCGTTATGGGTACCAGCTGGGACAGTGTGTGCTTGCAGGTGTCTCTCAGGTTCTGTTGGGTCTCTCTaGCTTTTATCAATAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AALWVPAGTVCACRCLSGSVGSL*LLSIIF Trigger: GAAGATTATTGATAAAAGCAAGAGAGACCCAACAGA...ACCTGAGAGACACCTGCAAGCACACACTGTCCCAGCTGGTACCCATAACGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | GCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCAAACATCTTGTGGCATCCCGAGTTaGGCTTTAAGAATCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ATCRQSLCYQLTSWYQTSCGIPS*ALRIIV Trigger: GACTATGATTCTTAAAGCCAAACTCGGGATGCCACA...AGATGTTTGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGAAATCGAACTTGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGCAGTGTGGCATCCCGAGTTaGGCTTTAAGAATCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SREIELANNHWKREERKQCGIPS*ALRIIV Trigger: GACTATGATTCTTAAAGCCAAACTCGGGATGCCACA...CTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | GGTACGTGCTACCTGTCGCCAGAGCTTGTGCTATCAGCTGACATCATGGTACCATTTGCAGGATTCCGTTaGAAAAGCATTCGTAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTCYLSPELVLSADIMVPFAGFR*KSIRKR Trigger: TCTTTTACGAATGCTTTTCAAACGGAATCCTGCAAA...TGGTACCATGATGTCAGCTGATAGCACAAGCTCTGGCGACAGGTAGCACGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | CCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTAGTCTGACAGAGCACCTGACTTTGACACCAGGTCCTTaGCTGTGTCTGAAACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PTSCPVNSSLVSLTEHLTLTPGP*LCLKQN Trigger: ATTCTGTTTCAGACACAGCAAAGGACCTGGTGTCAA...AGTCAGGTGCTCTGTCAGACTAACTAGAGAGCTGTTAACAGGACAGGAAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | TTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGTAGGTTCATCCATAATTaGCTGTCCATTCTCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FNSCSLNLAISKVCRQYCRFIHN*LSILRA Trigger: AGCGCGGAGAATGGACAGCAAATTATGGATGAACCT...ACAGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CAA 90 bp | GGATTAGCCTACTCTGGTCCTTTCCCTATCAAATACATGCCTTCTTTAGACGCTTATCACGTTCCATTTTaGTCCGAACACGGTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLAYSGPFPIKYMPSLDAYHVPF*SEHGLE Trigger: TTCGAGACCGTGTTCGGACAAAAATGGAACGTGATA...AGCGTCTAAAGAAGGCATGTATTTGATAGGGAAAGGACCAGAGTAGGCTAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CAA 90 bp | GTGCACACACACACACACACACCAACTTCCTGTCCTGTTAACAGCTCTCTAGTTGTAATTGCTGAACAATaGAATGCACACCAACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VHTHTHTPTSCPVNSSLVVIAEQ*NAHQLS Trigger: AGACAGTTGGTGTGCATTCAATTGTTCAGCAATTAC...AACTAGAGAGCTGTTAACAGGACAGGAAGTTGGTGTGTGTGTGTGTGTGTGCAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGAAATCGAACTTGCTAACAATCACTGGAAGCGAGAAGAGAGGAAGCAGGTAATTGCTGAACAATaGAATGCACACCAACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SREIELANNHWKREERKQVIAEQ*NAHQLS Trigger: AGACAGTTGGTGTGCATTCAATTGTTCAGCAATTAC...CTGCTTCCTCTCTTCTCGCTTCCAGTGATTGTTAGCAAGTTCGATTTCCCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS TCA 90 bp | AACAGTTTTGGTTATAGTAAACAGGACAGCGCTGGCCTCTCGCTCTaGGAAAAACTTCTGTCTAAGAATCTTATCCAGCAATTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSFGYSKQDSAGLSL*EKLLSKNLIQQFTS Trigger: GGAGGTGAATTGCTGGATAAGATTCTTAGACAGAAGTTTTTCTCAGAGCGAGAGGCCAGCGCTGTCCTGTTTACTATAACCAAAACTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTATGCCCGGTGAATCTTaGGGAGTTTTTGCAGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSIAVHSIWPSLRFADNTMPGES*GVFAVN Trigger: GTTTACTGCAAAAACTCCCAAAGATTCACCGGGCAT...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | TTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTGTATGCCCGGTGAATCTTaGGGAGTTTTTGCAGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FNSCSLNLAISKVCRQYCMPGES*GVFAVN Trigger: GTTTACTGCAAAAACTCCCAAAGATTCACCGGGCAT...ACAGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTACTGCCTTCTTCAGTTaGTGGGTTAATCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRERNPNKPQSLWTDFIGTAFFS*WVNLLL Trigger: GAGGAGGAGATTAACCCACAAACTGAAGAAGGCAGT...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | GGATTAGCCTACTCTGGTCCTTTCCCTATCAAATACATGCCTTCTTTAGACGCTCAACTTCCCTTCCGTTaGAAAAGCGTAATGCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: GLAYSGPFPIKYMPSLDAQLPFR*KSVMQF Trigger: AAATTGCATTACGCTTTTCAAACGGAAGGGAAGTTG...AGCGTCTAAAGAAGGCATGTATTTGATAGGGAAAGGACCAGAGTAGGCTAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CAA 90 bp | TGTAGAATACCACAGTCTCAAGAAACTGAATTCACTCCTTCATTAATTGGTCTCACTGCCTTCTTCAGTTaGTGGGTTAATCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRIPQSQETEFTPSLIGLTAFFS*WVNLLL Trigger: GAGGAGGAGATTAACCCACAAACTGAAGAAGGCAGT...GAGACCAATTAATGAAGGAGTGAATTCAGTTTCTTGAGACTGTGGTATTCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS-3UTR CAA 90 bp | TTAAGGGAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTTATCACGTTCCATTTTaGTCCGAACACGGTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRERNPNKPQSLWTDFIGYHVPF*SEHGLE Trigger: TTCGAGACCGTGTTCGGACAAAAATGGAACGTGATA...ACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTCCCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | CATTCAATAGCTGTTCACTCAATCTGGCCATCTCTAAGGTTTGCCGACAATACTCAACTTCCCTTCCGTTaGAAAAGCGTAATGCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HSIAVHSIWPSLRFADNTQLPFR*KSVMQF Trigger: AAATTGCATTACGCTTTTCAAACGGAAGGGAAGTTG...AGTATTGTCGGCAAACCTTAGAGATGGCCAGATTGAGTGAACAGCTATTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAAACCCTAACAAACCACAAAGTCTATGGACTGACTTCATAGGTGTGTTCTTTGCAGGATTCCGTTaGAAAAGCATTCGTAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERNPNKPQSLWTDFIGVFFAGFR*KSIRKR Trigger: TCTTTTACGAATGCTTTTCAAACGGAATCCTGCAAA...GAACACACCTATGAAGTCAGTCCATAGACTTTGTGGTTTGTTAGGGTTTCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS TCA 72 bp | AGAGTGGAGCGGCCCACTGGTTCCAAGACTGGGGACTaGTTGCGGTTTAAAGCAGAGTACGTAGCTGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RVERPTGSKTGD*LRFKAEYVAAM Trigger: CATGGCAGCTACGTACTCTGCTTTAAACCGCAATCAGTCCCCAGTCTTGGAACCAGTGGGCCGCTCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS GCA 72 bp | TTAATCTCCTCCTCTCCCATAGGTTCATCCATAATTTaGTGTCCATTCTCCGCGCTGTCGGAAGGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LISSSPIGSSII*CPFSALSEGLS Trigger: GGAGAGCCCTTCCGACAGCGCGGAGAATGGACAGCAAATTATGGATGAACCTATGGGAGAGGAGGAGATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS CCA 72 bp | GGCGCATCCTGTCTGTTTAGTTGGTATTGTGGTAGTTaGTCCCAGTGGACAATCCAAGGATGTCTGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GASCLFSWYCGS*SQWTIQGCLST Trigger: GGTGCTCAGACATCCTTGGATTGTCCACTGGGACCAACTACCACAATACCAACTAAACAGACAGGATGCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS CAA 72 bp | GTTAATCTCCTCCTCTCCCATAGGTTCATCCATAATTaGCTGTCCATTCTCCGCGCTGTCGGAAGGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VNLLLSHRFIHN*LSILRAVGRAL Trigger: GAGAGCCCTTCCGACAGCGCGGAGAATGGACAGCAAATTATGGATGAACCTATGGGAGAGGAGGAGATTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033671.13 |
||
| CDS CCA 72 bp | TGTCTGTTTAGTTGGTATTGTGGTAGTTGGTCCCAGTaGACAATCCAAGGATGTCTGAGCACCAGAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLFSWYCGSWSQ*TIQGCLSTRAA Trigger: GGCTGCTCTGGTGCTCAGACATCCTTGGATTGTCCACTGGGACCAACTACCACAATACCAACTAAACAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS CCA 72 bp | CCCTTTACGAGATGCGGCGCATCCTGTCTGTTTAGTTaGTATTGTGGTAGTTGGTCCCAGTGGACAATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PFTRCGASCLFS*YCGSWSQWTIQ Trigger: TTGGATTGTCCACTGGGACCAACTACCACAATACCAACTAAACAGACAGGATGCGCCGCATCTCGTAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
||
| CDS TCA 72 bp | GGTTATAGTAAACAGGACAGCGCTGGCCTCTCGCTCTaGGAAAAACTTCTGTCTAAGAATCTTATCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GYSKQDSAGLSL*EKLLSKNLIQQ Trigger: TTGCTGGATAAGATTCTTAGACAGAAGTTTTTCTCAGAGCGAGAGGCCAGCGCTGTCCTGTTTACTATAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| CDS CAA 90 bp | CACATAAAGAATGTTGCTAGGTTTCAAGTCTCTGTGAACCACCCCTaGTGCATGAAGATACTCAACAGTTTTGGTTATAGTAAACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: HIKNVARFQVSVNHP*CMKILNSFGYSKQD Trigger: GTCCTGTTTACTATAACCAAAACTGTTGAGTATCTTCATGCACAAGGGGTGGTTCACAGAGACTTGAAACCTAGCAACATTCTTTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| CDS TCA 72 bp | TCTTCAGGTCTGCCAGTTGCAGGCTTAAAAGGTGGGTaGATCTCTCTTCTATATAGTTTATTCCAGTCTATT | + |
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Preference number: 6 (lower is better) Translates to: SSGLPVAGLKGG*ISLLYSLFQSI Trigger: AATAGACTGGAATAAACTATATAGAAGAGAGATTCACCCACCTTTTAAGCCTGCAACTGGCAGACCTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| CDS GCA 72 bp | GTTGCTAGGTTTCAAGTCTCTGTGAACCACCCCTTGTaGATGAAGATACTCAACAGTTTTGGTTATAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: VARFQVSVNHPL*MKILNSFGYSK Trigger: TTTACTATAACCAAAACTGTTGAGTATCTTCATGCACAAGGGGTGGTTCACAGAGACTTGAAACCTAGCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| CDS CAA 72 bp | AATGTTGCTAGGTTTCAAGTCTCTGTGAACCACCCCTaGTGCATGAAGATACTCAACAGTTTTGGTTATAGT | + |
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Preference number: 6 (lower is better) Translates to: NVARFQVSVNHP*CMKILNSFGYS Trigger: ACTATAACCAAAACTGTTGAGTATCTTCATGCACAAGGGGTGGTTCACAGAGACTTGAAACCTAGCAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033671.13 ENSMUST00000112493.8 |
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| CDS CAA 72 bp | GTTAATCTCCTCCTCTCCCATAGGTTCATCCATAATTaGCTGTCCATTCAATGTGACAGGATTAAGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: VNLLLSHRFIHN*LSIQCDRIKNQ Trigger: CTGATTCTTAATCCTGTCACATTGAATGGACAGCAAATTATGGATGAACCTATGGGAGAGGAGGAGATTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156648.8 |
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