Pregenerated sensors for RPS6KA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023809Ensembl transcript IDs: ENSMUST00000024575.8, ENSMUST00000232527.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCAGCGCGGGCTGGGAGTGGGGTGGTGCCTTTCACCTGCACCGATaGGCCATGCTGGCTTCCCCTTCCACCTGTCCCTGCCACAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: RSAGWEWGGAFHLHR*AMLASPSTCPCHRG Trigger: CCCTCTGTGGCAGGGACAGGTGGAAGGGGAAGCCAGCATGGCTCATCGGTGCAGGTGAAAGGCACCACCCCACTCCCAGCCCGCGCTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | GACCAACAGGCGCCTCCTACAGGTGCCTCTACTGGGCAGAGGGGCTaGTTCTCAGACTGGCAGGTTCTGAGCCACAGTGGAGTGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: DQQAPPTGASTGQRG*FSDWQVLSHSGVSS Trigger: AGAAGACACTCCACTGTGGCTCAGAACCTGCCAGTCTGAGAAGCAGCCCCTCTGCCCAGTAGAGGCACCTGTAGGAGGCGCCTGTTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | CACATGGCCACTGGCATTGCCAGAACATCCAGGAACATCCAGCTCTaGTGTGGCTCTGCTGTCTCCAGGCAGGGACTGTGCACTAACACT | + |
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Preference number: 1 (lower is better) Translates to: HMATGIARTSRNIQL*CGSAVSRQGLCTNT Trigger: AGTGTTAGTGCACAGTCCCTGCCTGGAGACAGCAGAGCCACAGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR CCA 90 bp | AGGGGGCAGCAGTGTAGTGGGTACTGGCTCTGCCCGGCAATTTCCTaGGGCTCCTGTCTCAACCAACAGGAATCACGCTCTCAAATAGAC | + |
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Preference number: 1 (lower is better) Translates to: RGQQCSGYWLCPAIS*GSCLNQQESRSQID Trigger: GTCTATTTGAGAGCGTGATTCCTGTTGGTTGAGACAGGAGCCCCAGGAAATTGCCGGGCAGAGCCAGTACCCACTACACTGCTGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR TCA 90 bp | CCAAGTCAGAGACAGAGTCAGGGAGAGGCTACCCAGCATCTTGCTTaGGAGCAGGAGGGTGGTGAGGAGCACTCTTTGGGTGATTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: PSQRQSQGEATQHLA*EQEGGEEHSLGDCG Trigger: TCCACAATCACCCAAAGAGTGCTCCTCACCACCCTCCTGCTCTCAAGCAAGATGCTGGGTAGCCTCTCCCTGACTCTGTCTCTGACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | AACATCCAGCTCTGCTGTGGCTCTGCTGTCTCCAGGCAGGGACTGTaGACTAACACTCTCAGAGAGACAGTGGGACACGTAGGTGACATC | + |
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Preference number: 1 (lower is better) Translates to: NIQLCCGSAVSRQGL*TNTLRETVGHVGDI Trigger: GATGTCACCTACGTGTCCCACTGTCTCTCTGAGAGTGTTAGTGCACAGTCCCTGCCTGGAGACAGCAGAGCCACAGCAGAGCTGGATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR CCA 90 bp | GTGGACAGAGCCAGGCATCTAAGCTGGATGCTTTCACATGGCCACTaGCATTGCCAGAACATCCAGGAACATCCAGCTCTGCTGTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: VDRARHLSWMLSHGH*HCQNIQEHPALLWL Trigger: GAGCCACAGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGCTCTGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR TCA 90 bp | AGTGGCCGCCGTCTCAACACACAGCCAGAAAGTGTGAACATGGAGTaGGCTGTAAACGGAACTGCTGATCATGTAAACGCAGCGCGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SGRRLNTQPESVNME*AVNGTADHVNAARA Trigger: AGCCCGCGCTGCGTTTACATGATCAGCAGTTCCGTTTACAGCTCACTCCATGTTCACACTTTCTGGCTGTGTGTTGAGACGGCGGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | AGAGCCAGGCATCTAAGCTGGATGCTTTCACATGGCCACTGGCATTaGCAGAACATCCAGGAACATCCAGCTCTGCTGTGGCTCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RARHLSWMLSHGHWH*QNIQEHPALLWLCC Trigger: ACAGCAGAGCCACAGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | CTGAAAGAGGTGATGCGGCCACGTGACCATGAGAGGGACAGGCTATaGTCGCCTCCTCAGCCATGCCTTCTGTGTTCTGTTGTTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LKEVMRPRDHERDRL*SPPQPCLLCSVVLS Trigger: AGAAAGAACAACAGAACACAGAAGGCATGGCTGAGGAGGCGAGCATAGCCTGTCCCTCTCATGGTCACGTGGCCGCATCACCTCTTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR CCA 90 bp | CCCAGCATCTTGCTTGAGAGCAGGAGGGTGGTGAGGAGCACTCTTTaGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: PSILLESRRVVRSTL*VIVDRARHLSWMLS Trigger: TGAAAGCATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCACCACCCTCCTGCTCTCAAGCAAGATGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR TCA 90 bp | ACAGTCTTGCGGGTGGTGAAGGGCGGCAAAATGTGCCAGAGAGAATaGAGAGTCACGGTGTATCTCCTCCTGTGCTTGAGAGAAGCGGTA | + |
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Preference number: 1 (lower is better) Translates to: TVLRVVKGGKMCQRE*RVTVYLLLCLREAV Trigger: TACCGCTTCTCTCAAGCACAGGAGGAGATACACCGTGACTCTTCATTCTCTCTGGCACATTTTGCCGCCCTTCACCACCCGCAAGACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR CCA 90 bp | GGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGCTTTCACATaGCCACTGGCATTGCCAGAACATCCAGGAACATCCAGCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GDCGQSQASKLDAFT*PLALPEHPGTSSSA Trigger: AGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR CCA 90 bp | GCAAAGGAAACAGAGAGACAGCCAAGGCCAGATCCATCTTTGTGCTaGACTCATGGGCACTCAAGTGCCCATGAACAGGACCTATGTCTG | + |
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Preference number: 1 (lower is better) Translates to: AKETERQPRPDPSLC*THGHSSAHEQDLCL Trigger: CAGACATAGGTCCTGTTCATGGGCACTTGAGTGCCCATGAGTCCAGCACAAAGATGGATCTGGCCTTGGCTGTCTCTCTGTTTCCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR TCA 90 bp | TATCAAGAATCGCAAGGATTCGGGCCCAGAACATTAACTGGGAGATaGTCTCAGCCTTGGGCAGAGCATCCACTGAGAAAGCAGGAGACC | + |
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Preference number: 1 (lower is better) Translates to: YQESQGFGPRTLTGR*SQPWAEHPLRKQET Trigger: GGTCTCCTGCTTTCTCAGTGGATGCTCTGCCCAAGGCTGAGATCATCTCCCAGTTAATGTTCTGGGCCCGAATCCTTGCGATTCTTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | CCACGTGACCATGAGAGGGACAGGCTATGCTCGCCTCCTCAGCCATaGCTTCTGTGTTCTGTTGTTCTTTCTTTTCATTGGAACATGTAC | + |
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Preference number: 1 (lower is better) Translates to: PRDHERDRLCSPPQP*LLCSVVLSFHWNMY Trigger: GTACATGTTCCAATGAAAAGAAAGAACAACAGAACACAGAAGGCATGGCTGAGGAGGCGAGCATAGCCTGTCCCTCTCATGGTCACGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | CGCAGACTACAGCCTGAAAACAGGCTAGACAACAGAAACACAAGATaGAACATAGGACCACAGCTTCTAAGAAGAGCATCACTCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: RRLQPENRLDNRNTR*NIGPQLLRRASLPL Trigger: CAGTGGGAGTGATGCTCTTCTTAGAAGCTGTGGTCCTATGTTGCATCTTGTGTTTCTGTTGTCTAGCCTGTTTTCAGGCTGTAGTCTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR GCA 90 bp | AGAGTCACGGTGTATCTCCTCCTGTGCTTGAGAGAAGCGGTACAATaGAGGGGAAATCCCAAAGGGCATCTTAAGGAAGAACACCATTTA | + |
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Preference number: 1 (lower is better) Translates to: RVTVYLLLCLREAVQ*RGNPKGHLKEEHHL Trigger: TAAATGGTGTTCTTCCTTAAGATGCCCTTTGGGATTTCCCCTGCATTGTACCGCTTCTCTCAAGCACAGGAGGAGATACACCGTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR TCA 90 bp | GTTTTGAGGTCTGAAATAATTAGACTGAGCAAAGGAATTATGTTCTaGACATTCCACTGGGGCAGGCATTGCAGAAGCAGCCGTGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: VLRSEIIRLSKGIMF*TFHWGRHCRSSRGP Trigger: TGGACCACGGCTGCTTCTGCAATGCCTGCCCCAGTGGAATGTTCAGAACATAATTCCTTTGCTCAGTCTAATTATTTCAGACCTCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTAAACGCAGCGCGGGCTGGGAGTGGGGTGGTGCCTTTCACCTGCACCGATTCTGCAGGGCAAGGCTaGGCATCCTTCCAGACACTT | + |
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Preference number: 2 (lower is better) Translates to: HVNAARAGSGVVPFTCTDSAGQG*ASFQTL Trigger: AAGTGTCTGGAAGGATGCTCAGCCTTGCCCTGCAGA...ATCGGTGCAGGTGAAAGGCACCACCCCACTCCCAGCCCGCGCTGCGTTTACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGATAGCCTGGTCCGTGTAACTACTGCTCCCTGCGCAGACTACAGCCTGAAAGTTGGGCAGGGCGACTaGGGCTGGAGACTTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TDSLVRVTTAPCADYSLKVGQGD*GWRLGW Trigger: CCAGCCAAGTCTCCAGCCTCAGTCGCCCTGCCCAAC...TTTCAGGCTGTAGTCTGCGCAGGGAGCAGTAGTTACACGGACCAGGCTATCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTAAACGCAGCGCGGGCTGGGAGTGGGGTGGTGCCTTTCACCTGCACCGATCAGGGACACTGGAAATaGCACACAGTCTATCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: HVNAARAGSGVVPFTCTDQGHWK*HTVYPH Trigger: GTGGGGATAGACTGTGTGCCATTTCCAGTGTCCCTG...ATCGGTGCAGGTGAAAGGCACCACCCCACTCCCAGCCCGCGCTGCGTTTACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGACCATGAGAGGGACAGGCTATGCTCGCCTCCTCAGCCATGCCTTCTGTGTGAGCATCACTCCCACTaGCAACTTGTCCAGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: RDHERDRLCSPPQPCLLCEHHSH*QLVQAP Trigger: AGGTGCCTGGACAAGTTGTCAGTGGGAGTGATGCTC...ACACAGAAGGCATGGCTGAGGAGGCGAGCATAGCCTGTCCCTCTCATGGTCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTAAACGCAGCGCGGGCTGGGAGTGGGGTGGTGCCTTTCACCTGCACCGATACATTAACTGGGAGATaGTCTCAGCCTTGGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HVNAARAGSGVVPFTCTDTLTGR*SQPWAE Trigger: CTCTGCCCAAGGCTGAGATCATCTCCCAGTTAATGT...ATCGGTGCAGGTGAAAGGCACCACCCCACTCCCAGCCCGCGCTGCGTTTACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTAAACGCAGCGCGGGCTGGGAGTGGGGTGGTGCCTTTCACCTGCACCGATTCGCCTCCTCAGCCATaGCTTCTGTGTTCTGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: HVNAARAGSGVVPFTCTDSPPQP*LLCSVV Trigger: AACAACAGAACACAGAAGGCATGGCTGAGGAGGCGA...ATCGGTGCAGGTGAAAGGCACCACCCCACTCCCAGCCCGCGCTGCGTTTACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTGGGTAAAGGGTCACAGGCCAGGTAAACACTGGGGACACGGGGTTACATGCGGCTACCCAGCATCTTaGTTGAGAGCAGGAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: CWVKGHRPGKHWGHGVTCGYPAS*LRAGGW Trigger: CCACCCTCCTGCTCTCAAGCAAGATGCTGGGTAGCC...GCATGTAACCCCGTGTCCCCAGTGTTTACCTGGCCTGTGACCCTTTACCCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGTCCACTATCCTCAGCAGCCTCCAGAGAGACTTCAGGACACACAAGTCCTGTCCAGGCACCTTCTaGCTGTCTAAGGCAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PESTILSSLQRDFRTHKSCPGTF*LSKARG Trigger: GCCCCTTGCCTTAGACAGGCAGAAGGTGCCTGGACA...GGACTTGTGTGTCCTGAAGTCTCTCTGGAGGCTGCTGAGGATAGTGGACTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR CAA 90 bp | CAGAGCCAGGCATCTAAGCTGGATGCTTTCACATGGCCACTGGCATaGCCAGAACATCCAGGAACATCCAGCTCTGCTGTGGCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QSQASKLDAFTWPLA*PEHPGTSSSAVALL Trigger: CAGCAGAGCCACAGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGGTAAAGGGTCACAGGCCAGGTAAACACTGGGGACACGGGGTTACATGCCAGACTGGCAGGTTCTaGGCCACAGTGGAGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: CWVKGHRPGKHWGHGVTCQTGRF*ATVECL Trigger: AAGACACTCCACTGTGGCTCAGAACCTGCCAGTCTG...GCATGTAACCCCGTGTCCCCAGTGTTTACCTGGCCTGTGACCCTTTACCCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTGGGATAGCCCAAAAGTAGCTGGGCAGAGCATCCACTaGGAAAGCAGGAGACCATCC | + |
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Preference number: 2 (lower is better) Translates to: MFSAQTGQELQWDSPKVAGQSIH*ESRRPS Trigger: GGATGGTCTCCTGCTTTCTCAGTGGATGCTCTGCCC...AGCTACTTTTGGGCTATCCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | GACCATCCCCAGGGACACTGGAAATGGCACACAGTCTATCCCCACTCTGTATTTTCTCTCCAGTGTCCCTaGGGCCACAGGGTTAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: DHPQGHWKWHTVYPHSVFSLQCP*GHRVKG Trigger: CCCCTTAACCCTGTGGCCCCAGGGACACTGGAGAGA...AAATACAGAGTGGGGATAGACTGTGTGCCATTTCCAGTGTCCCTGGGGATGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACCATCCCCAGGGACACTGGAAATGGCACACAGTCTATCCCCACTCTGTGGCTGCTTCTCAGACTaGCAGGTTCTGAGCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: RRPSPGTLEMAHSLSPLCGCFSD*QVLSHS Trigger: ACTGTGGCTCAGAACCTGCCAGTCTGAGAAGCAGCC...ACAGAGTGGGGATAGACTGTGTGCCATTTCCAGTGTCCCTGGGGATGGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCCGTCACTAAGACTACCCACTGCTCTGCTGTGGCTCTaGTGTCTCCAGGCAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: QSSCSFPRGQNPSLRLPTALLWL*CLQAGT Trigger: AGTCCCTGCCTGGAGACAGCAGAGCCACAGCAGAGC...AGTGGGTAGTCTTAGTGACGGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGGAGCGCTCATCATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTGGGAAAGGAATTATGTTCTaGACATTCCACTGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SVERSSCSQPKQGRSCSGKGIMF*TFHWGR Trigger: CCTGCCCCAGTGGAATGTTCAGAACATAATTCCTTT...CCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACATGATGAGCGCTCCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTGGGATAGCCCAAAAGTAGCTGTATCAAGTACTGGGTaGGGTGGGAATGTGGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: MFSAQTGQELQWDSPKVAVSSTG*GGNVGY Trigger: GTACCCCACATTCCCACCTCACCCAGTACTTGATAC...AGCTACTTTTGGGCTATCCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGCTAGACAACAGAAACACAAGACATCCAGCTCTGCTGTaGCTCTGCTGTCTCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: CSLRRLQPENRLDNRNTRHPALL*LCCLQA Trigger: TGCCTGGAGACAGCAGAGCCACAGCAGAGCTGGATG...TCTTGTGTTTCTGTTGTCTAGCCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGATAGCCTGGTCCGTGTAACTACTGCTCCCTGCGCAGACTACAGCCTGAAAGTGAGGAGCACTCTTTaGGTGATTGTGGACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: TDSLVRVTTAPCADYSLKVRSTL*VIVDRA Trigger: GGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCAC...TTTCAGGCTGTAGTCTGCGCAGGGAGCAGTAGTTACACGGACCAGGCTATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGCGGTACAATGCAGGGGAAATCCCAAAGGGCATCTTAAGGAAGAACACCTACAGGTGCCTCTACTaGGCAGAGGGGCTGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: EKRYNAGEIPKGILRKNTYRCLY*AEGLLL Trigger: GAGAAGCAGCCCCTCTGCCCAGTAGAGGCACCTGTA...GGTGTTCTTCCTTAAGATGCCCTTTGGGATTTCCCCTGCATTGTACCGCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTGGGATAGCCCAAAAGTAGCTCACAGCAGGCAAATATaGGCAGAGATGCCAACACAC | + |
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Preference number: 2 (lower is better) Translates to: MFSAQTGQELQWDSPKVAHSRQI*AEMPTH Trigger: GTGTGTTGGCATCTCTGCTCATATTTGCCTGCTGTG...AGCTACTTTTGGGCTATCCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGTTTGGAAAGCATAATAAATATCTGTACAGTGGCCGCCGTCTCAACACAACCCAGCCTGAGCCGTaGGCAGCTGGAGCAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GKFGKHNKYLYSGRRLNTTQPEP*AAGARV Trigger: CACCCTTGCTCCAGCTGCTCACGGCTCAGGCTGGGT...TGTGTTGAGACGGCGGCCACTGTACAGATATTTATTATGCTTTCCAAACTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCTGTCTAAGGCAAGGGGCTCAGGTGTCTCTCCTGTCCTCAGTCAAGAAGACCCTTTCCAGGGCTaGAAAGGAAACAGAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: FCLSKARGSGVSPVLSQEDPFQG*KGNRET Trigger: TGTCTCTCTGTTTCCTTTGCAGCCCTGGAAAGGGTC...TTCTTGACTGAGGACAGGAGAGACACCTGAGCCCCTTGCCTTAGACAGGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGCTAGACAACAGAAACACAAGATGCCCGGCAATTTCCTaGGGCTCCTGTCTCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: CSLRRLQPENRLDNRNTRCPAIS*GSCLNQ Trigger: TTGGTTGAGACAGGAGCCCCAGGAAATTGCCGGGCA...TCTTGTGTTTCTGTTGTCTAGCCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGCGGTACAATGCAGGGGAAATCCCAAAGGGCATCTTAAGGAAGAACACCAAACAGGGCAGGAGCTaGAGTGGGATAGCCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EKRYNAGEIPKGILRKNTKQGRS*SGIAQK Trigger: CTTTTGGGCTATCCCACTGCAGCTCCTGCCCTGTTT...GGTGTTCTTCCTTAAGATGCCCTTTGGGATTTCCCCTGCATTGTACCGCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCTGTCTAAGGCAAGGGGCTCAGGTGTCTCTCCTGTCCTCAGTCAAGAAGATCCATCTTTGTGCTaGACTCATGGGCACTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: FCLSKARGSGVSPVLSQEDPSLC*THGHSS Trigger: ACTTGAGTGCCCATGAGTCCAGCACAAAGATGGATC...TTCTTGACTGAGGACAGGAGAGACACCTGAGCCCCTTGCCTTAGACAGGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR GCA 90 bp | GACCATCCCCAGGGACACTGGAAATGGCACACAGTCTATCCCCACTCTGTATTTTGGTTGCTTTCATCCTaGCAAGTCAGAGACAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: DHPQGHWKWHTVYPHSVFWLLSS*QVRDRV Trigger: GACTCTGTCTCTGACTTGGCAGGATGAAAGCAACCA...AAATACAGAGTGGGGATAGACTGTGTGCCATTTCCAGTGTCCCTGGGGATGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGAGCACTCTTTGGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGGGTGACAGATTCATTTaGTTTCACTCAGGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: VRSTLWVIVDRARHLSWMGDRFI*FHSGGE Trigger: CTCTCCTCCTGAGTGAAACCAAATGAATCTGTCACC...CATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTCTGAGCCACAGTGGAGTGTCTTCTGACCTGAGTCCACTATCCTCAGCATCTAGACTCTTGGGTTaGTTGCTTTCATCCTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: QVLSHSGVSSDLSPLSSASRLLG*LLSSCQ Trigger: TTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGA...TGCTGAGGATAGTGGACTCAGGTCAGAAGACACTCCACTGTGGCTCAGAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CAA 90 bp | GGGACAGGCTATGCTCGCCTCCTCAGCCATGCCTTCTGTGTTCTGTaGTTCTTTCTTTTCATTGGAACATGTACACTTGAAGCTGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GTGYARLLSHAFCVL*FFLFIGTCTLEAAS Trigger: GCTTGCAGCTTCAAGTGTACATGTTCCAATGAAAAGAAAGAACAACAGAACACAGAAGGCATGGCTGAGGAGGCGAGCATAGCCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGTTTGGAAAGCATAATAAATATCTGTACAGTGGCCGCCGTCTCAACACACAACACACCCAGCAATaGCAGAGCCCCACTCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GKFGKHNKYLYSGRRLNTQHTQQ*QSPTLS Trigger: GGAGAGAGTGGGGCTCTGCCATTGCTGGGTGTGTTG...TGTGTTGAGACGGCGGCCACTGTACAGATATTTATTATGCTTTCCAAACTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCTCTGGATTTCTATCAAGAATCGCAAGGATTCGGGCCCAGAACATTAACTGCGCAGACTACAGCCTaGAAACAGGCTAGACAACAG | + |
|
Preference number: 2 (lower is better) Translates to: FPLDFYQESQGFGPRTLTAQTTA*KQARQQ Trigger: CTGTTGTCTAGCCTGTTTTCAGGCTGTAGTCTGCGC...AGTTAATGTTCTGGGCCCGAATCCTTGCGATTCTTGATAGAAATCCAGAGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCTCTGGATTTCTATCAAGAATCGCAAGGATTCGGGCCCAGAACATTAACTCATCCCCAGGGACACTaGAAATGGCACACAGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: FPLDFYQESQGFGPRTLTHPQGH*KWHTVY Trigger: ATAGACTGTGTGCCATTTCCAGTGTCCCTGGGGATG...AGTTAATGTTCTGGGCCCGAATCCTTGCGATTCTTGATAGAAATCCAGAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGTTTGGAAAGCATAATAAATATCTGTACAGTGGCCGCCGTCTCAACACAAGAAGACATTCTCTGTaGCCCAGGAAAGCAGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GKFGKHNKYLYSGRRLNTRRHSL*PRKAER Trigger: TCTCTCTGCTTTCCTGGGCCACAGAGAATGTCTTCT...TGTGTTGAGACGGCGGCCACTGTACAGATATTTATTATGCTTTCCAAACTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | GGCTGGGAGTGGGGTGGTGCCTTTCACCTGCACCGATaGGCCATGCTGGCTTCCCCTTCCACCTGTCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GWEWGGAFHLHR*AMLASPSTCPC Trigger: GCAGGGACAGGTGGAAGGGGAAGCCAGCATGGCTCATCGGTGCAGGTGAAAGGCACCACCCCACTCCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | AAACCCAGCCTGAGCCGTGAGCAGCTGGAGCAAGGGTaGATGCCAGAGAGGCCCTCGGAGGGTGCCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KPSLSREQLEQG*MPERPSEGARA Trigger: AGCTCTGGCACCCTCCGAGGGCCTCTCTGGCATGCACCCTTGCTCCAGCTGCTCACGGCTCAGGCTGGGTTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | GACCTATGTCTGGTGTCTGTGAGGCTGAGAGGACGTTaGGCAGGGCGACTGAGGCTGGAGACTTGGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DLCLVSVRLRGR*AGRLRLETWLA Trigger: GGCCAGCCAAGTCTCCAGCCTCAGTCGCCCTGCCCAACGTCCTCTCAGCCTCACAGACACCAGACATAGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | GGAGCAAGGGTGCATGCCAGAGAGGCCCTCGGAGGGTaGCAGAGCTCCTGTTCATTTCCCAGAGGACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GARVHAREALGG*QSSCSFPRGQN Trigger: ATTCTGTCCTCTGGGAAATGAACAGGAGCTCTGGCACCCTCCGAGGGCCTCTCTGGCATGCACCCTTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | TGGTCCACCTGTGGTCTTCCTAGTGTAAGCCTGCTGTaGCCAACAGGCGCCTCCTACAGGTGCCTCTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: WSTCGLPSVSLL*PTGASYRCLYW Trigger: CCAGTAGAGGCACCTGTAGGAGGCGCCTGTTGGTCACAGCAGGCTTACACTAGGAAGACCACAGGTGGACCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | ACTGGCATTGCCAGAACATCCAGGAACATCCAGCTCTaGTGTGGCTCTGCTGTCTCCAGGCAGGGACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGIARTSRNIQL*CGSAVSRQGLC Trigger: GCACAGTCCCTGCCTGGAGACAGCAGAGCCACAGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | GTGATGCGGCCACGTGACCATGAGAGGGACAGGCTATaGTCGCCTCCTCAGCCATGCCTTCTGTGTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VMRPRDHERDRL*SPPQPCLLCSV Trigger: AACAGAACACAGAAGGCATGGCTGAGGAGGCGAGCATAGCCTGTCCCTCTCATGGTCACGTGGCCGCATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | AGACAGAGTCAGGGAGAGGCTACCCAGCATCTTGCTTaGGAGCAGGAGGGTGGTGAGGAGCACTCTTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RQSQGEATQHLA*EQEGGEEHSLG Trigger: ACCCAAAGAGTGCTCCTCACCACCCTCCTGCTCTCAAGCAAGATGCTGGGTAGCCTCTCCCTGACTCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | CTGGGAGATGATCTCAGCCTTGGGCAGAGCATCCACTaGGAAAGCAGGAGACCATCCCCAGGGACACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LGDDLSLGQSIH*ESRRPSPGTLE Trigger: TTCCAGTGTCCCTGGGGATGGTCTCCTGCTTTCTCAGTGGATGCTCTGCCCAAGGCTGAGATCATCTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | GAACATGTACACTTGAAGCTGCAAGCAAACCCAGCCTaGGCCGTGAGCAGCTGGAGCAAGGGTGCATGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EHVHLKLQANPA*AVSSWSKGACQ Trigger: CTGGCATGCACCCTTGCTCCAGCTGCTCACGGCTCAGGCTGGGTTTGCTTGCAGCTTCAAGTGTACATGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | CTCTGCTGTGGCTCTGCTGTCTCCAGGCAGGGACTGTaGACTAACACTCTCAGAGAGACAGTGGGACACGTA | + |
|
Preference number: 3 (lower is better) Translates to: LCCGSAVSRQGL*TNTLRETVGHV Trigger: TACGTGTCCCACTGTCTCTCTGAGAGTGTTAGTGCACAGTCCCTGCCTGGAGACAGCAGAGCCACAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | CAGTGTAGTGGGTACTGGCTCTGCCCGGCAATTTCCTaGGGCTCCTGTCTCAACCAACAGGAATCACGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QCSGYWLCPAIS*GSCLNQQESRS Trigger: AGAGCGTGATTCCTGTTGGTTGAGACAGGAGCCCCAGGAAATTGCCGGGCAGAGCCAGTACCCACTACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | TTGCTTGAGAGCAGGAGGGTGGTGAGGAGCACTCTTTaGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLESRRVVRSTL*VIVDRARHLSW Trigger: CCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCACCACCCTCCTGCTCTCAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGGTAAAGGGTCACAGGCCAGGTAAACACTGGGGACACGGGGTTACATGCACATGGCCACTGGCATaGCCAGAACATCCAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: CWVKGHRPGKHWGHGVTCTWPLA*PEHPGT Trigger: TGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGT...GCATGTAACCCCGTGTCCCCAGTGTTTACCTGGCCTGTGACCCTTTACCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | GGAATGTGGGGTACTCCACTCTCTGCAGGGCAAGGCTaGGCATCCTTCCAGACACTTCAAGGATGCGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GMWGTPLSAGQG*ASFQTLQGCVC Trigger: ACAAACGCATCCTTGAAGTGTCTGGAAGGATGCTCAGCCTTGCCCTGCAGAGAGTGGAGTACCCCACATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | CGGGTGGTGAAGGGCGGCAAAATGTGCCAGAGAGAATaGAGAGTCACGGTGTATCTCCTCCTGTGCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RVVKGGKMCQRE*RVTVYLLLCLR Trigger: TCTCAAGCACAGGAGGAGATACACCGTGACTCTTCATTCTCTCTGGCACATTTTGCCGCCCTTCACCACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | ACAGAGAGACAGCCAAGGCCAGATCCATCTTTGTGCTaGACTCATGGGCACTCAAGTGCCCATGAACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TERQPRPDPSLC*THGHSSAHEQD Trigger: GTCCTGTTCATGGGCACTTGAGTGCCCATGAGTCCAGCACAAAGATGGATCTGGCCTTGGCTGTCTCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | GCCAGGCATCTAAGCTGGATGCTTTCACATGGCCACTaGCATTGCCAGAACATCCAGGAACATCCAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARHLSWMLSHGH*HCQNIQEHPAL Trigger: CAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | GGACAGAGCCAGGCATCTAAGCTGGATGCTTTCACATaGCCACTGGCATTGCCAGAACATCCAGGAACATCC | + |
|
Preference number: 3 (lower is better) Translates to: GQSQASKLDAFT*PLALPEHPGTS Trigger: GGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGCTCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | TCGCAAGGATTCGGGCCCAGAACATTAACTGGGAGATaGTCTCAGCCTTGGGCAGAGCATCCACTGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQGFGPRTLTGR*SQPWAEHPLRK Trigger: CTTTCTCAGTGGATGCTCTGCCCAAGGCTGAGATCATCTCCCAGTTAATGTTCTGGGCCCGAATCCTTGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | TTTCCCACTCTAGGTGTCTCACAGTCTTGCGGGTGGTaGAGGGCGGCAAAATGTGCCAGAGAGAATGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FPTLGVSQSCGW*RAAKCARENEE Trigger: CTCTTCATTCTCTCTGGCACATTTTGCCGCCCTTCACCACCCGCAAGACTGTGAGACACCTAGAGTGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | GAAACAGAGAGACAGCCAAGGCCAGATCCATCTTTGTaGTGGACTCATGGGCACTCAAGTGCCCATGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: ETERQPRPDPSL*WTHGHSSAHEQ Trigger: CTGTTCATGGGCACTTGAGTGCCCATGAGTCCAGCACAAAGATGGATCTGGCCTTGGCTGTCTCTCTGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | CATCTAAGCTGGATGCTTTCACATGGCCACTGGCATTaGCAGAACATCCAGGAACATCCAGCTCTGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HLSWMLSHGHWH*QNIQEHPALLW Trigger: CCACAGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCCGTCACTAAGACTACCCACTGAGATGATCTCAGCCTaGGGCAGAGCATCCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSSCSFPRGQNPSLRLPTEMISA*GRASTE Trigger: CTCAGTGGATGCTCTGCCCAAGGCTGAGATCATCTC...AGTGGGTAGTCTTAGTGACGGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | ATATGCTATACCACAGCAGGCAAATATGAGCAGAGATaGCAACACACCCAGCAATGGCAGAGCCCCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ICYTTAGKYEQR*QHTQQWQSPTL Trigger: GAGAGTGGGGCTCTGCCATTGCTGGGTGTGTTGGCATCTCTGCTCATATTTGCCTGCTGTGGTATAGCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | GAGAATGAAGAGTCACGGTGTATCTCCTCCTGTGCTTaGGAGAAGCGGTACAATGCAGGGGAAATCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ENEESRCISSCA*EKRYNAGEIPK Trigger: CTTTGGGATTTCCCCTGCATTGTACCGCTTCTCTCAAGCACAGGAGGAGATACACCGTGACTCTTCATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR GCA 72 bp | AACACTGGGGACACGGGGTTACATGCCACAGCAGACTaGTGTGGCACTGAAGACTTTAAAGAACAGGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: NTGDTGLHATAD*CGTEDFKEQGL Trigger: TAATCCCTGTTCTTTAAAGTCTTCAGTGCCACAGCAGTCTGCTGTGGCATGTAACCCCGTGTCCCCAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | GAGAGAGTGAATATGCTATACCACAGCAGGCAAATATaGGCAGAGATGCCAACACACCCAGCAATGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ERVNMLYHSRQI*AEMPTHPAMAE Trigger: CTCTGCCATTGCTGGGTGTGTTGGCATCTCTGCTCATATTTGCCTGCTGTGGTATAGCATATTCACTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | CGTCTCAACACACAGCCAGAAAGTGTGAACATGGAGTaGGCTGTAAACGGAACTGCTGATCATGTAAACGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLNTQPESVNME*AVNGTADHVNA Trigger: TGCGTTTACATGATCAGCAGTTCCGTTTACAGCTCACTCCATGTTCACACTTTCTGGCTGTGTGTTGAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | TCACGCTCTCAAATAGACTCTAGCCATCTAGACTCTTaGGTTGGTTGCTTTCATCCTGCCAAGTCAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SRSQIDSSHLDS*VGCFHPAKSET Trigger: TGTCTCTGACTTGGCAGGATGAAAGCAACCAACCCAAGAGTCTAGATGGCTAGAGTCTATTTGAGAGCGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CCA 72 bp | GAACAGGGATTAAAACGATCCTGTCACGTGCTCCTCTaGCTGACTCCACGAGAGATTTCAAGTATCAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: EQGLKRSCHVLL*LTPREISSIKY Trigger: GTACTTGATACTTGAAATCTCTCGTGGAGTCAGCCAGAGGAGCACGTGACAGGATCGTTTTAATCCCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR TCA 72 bp | TCTGAAATAATTAGACTGAGCAAAGGAATTATGTTCTaGACATTCCACTGGGGCAGGCATTGCAGAAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SEIIRLSKGIMF*TFHWGRHCRSS Trigger: GCTGCTTCTGCAATGCCTGCCCCAGTGGAATGTTCAGAACATAATTCCTTTGCTCAGTCTAATTATTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCTGGAGCAAGGGTGCATGCCAGAGAGGCCCTCGGAGGGTGCCAGAGCTCTCAGGCCTGCCCACTaGTGGCTTGAAGGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQLEQGCMPERPSEGARALRPAH*WLEGWL Trigger: AAGCCACCCTTCAAGCCAGCAGTGGGCAGGCCTGAG...AGCTCTGGCACCCTCCGAGGGCCTCTCTGGCATGCACCCTTGCTCCAGCTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCCAGAGAGACTTCAGGACACACAAGTCCCTCCTCTCCGACCAGGAGGAGTCGAGGCGACTCAGACTaGAGCTCTTGGAGCGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASRETSGHTSPSSPTRRSRGDSD*SSWSAT Trigger: AGTCGCGCTCCAAGAGCTCCAGTCTGAGTCGCCTCG...ACTCCTCCTGGTCGGAGAGGAGGGACTTGTGTGTCCTGAAGTCTCTCTGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTGGAGCGCTCATCATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTGGGCTTTGGAAAGCCTGGTaGAGAGGTCACCTCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVERSSCSQPKQGRSCSGLWKAW*RGHLPA Trigger: TGCGGGGAGGTGACCTCTTCACCAGGCTTTCCAAAG...CCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACATGATGAGCGCTCCACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCTGGAGCAAGGGTGCATGCCAGAGAGGCCCTCGGAGGGTGCCAGAGCTTCTCATAGCCGTCAGTaGAGTGGATGTTGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQLEQGCMPERPSEGARASHSRQ*SGCCSH Trigger: ATGGGAACAACATCCACTTCACTGACGGCTATGAGA...AGCTCTGGCACCCTCCGAGGGCCTCTCTGGCATGCACCCTTGCTCCAGCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | TCAGACATCCTGGGCAGGACCCTTTCCAGGGCTGCAAAGGAAACAGAGAGACAGTGCTGCACAATTGGGTaGATGGGGGCCTTGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SDILGRTLSRAAKETERQCCTIG*MGALGT Trigger: CGTGCCCAAGGCCCCCATTCACCCAATTGTGCAGCA...CTGTCTCTCTGTTTCCTTTGCAGCCCTGGAAAGGGTCCTGCCCAGGATGTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAGCAGGAGGGTGGTGAGGAGCACTCTTTGGGTGATTGTGGACAGAGCCTATAGCAGGGGGTCATaGGCAGCCCATTCTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LESRRVVRSTLWVIVDRAYSRGS*AAHSPL Trigger: GAGCGGAGAATGGGCTGCTCATGACCCCCTGCTATA...GGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCACCACCCTCCTGCTCTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | TGTTGGGTAAAGGGTCACAGGCCAGGTAAACACTGGGGACACGGGGTTACATGCGCTGTTAGGCGTTGCTaGGGGTCCACGTGGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CWVKGHRPGKHWGHGVTCAVRRC*GSTWSI Trigger: GATGCTCCACGTGGACCCTCAGCAACGCCTAACAGC...GCATGTAACCCCGTGTCCCCAGTGTTTACCTGGCCTGTGACCCTTTACCCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGCTTTCACATGGCCACACACCGCTTGCACACTaGGTAGGAGCCCACCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: WVIVDRARHLSWMLSHGHTPLAH*VGAHPD Trigger: ATCGGGGTGGGCTCCTACTCAGTGTGCAAGCGGTGT...GTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTTTGTGCTGGACTCATGGGCACTCAAGTGCCCATGAACAGGACCTATGTGCTCCCCGCCTCGCATaGGCTCCATCACCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLCWTHGHSSAHEQDLCAPRLA*APSPGR Trigger: TCTACCTGGTGATGGAGCTCATGCGAGGCGGGGAGC...ACATAGGTCCTGTTCATGGGCACTTGAGTGCCCATGAGTCCAGCACAAAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTGGAGCGCTCATCATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTGGGGAACTGGGAGGGGTCTaGCTTCTCAAAGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVERSSCSQPKQGRSCSGELGGV*LLKAFL Trigger: AAGGAAGGCTTTGAGAAGGCAGACCCCTCCCAGTTC...CCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACATGATGAGCGCTCCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGACCATCCCCAGGGACACTGGAAATGGCACACAGTCTATCCCCACTCTGTGTGGGCGTTTGCACTTaGGGGGACACCAGGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RRPSPGTLEMAHSLSPLCVGVCT*GDTRRI Trigger: GATTCTCCTGGTGTCCCCCCAAGTGCAAACGCCCAC...ACAGAGTGGGGATAGACTGTGTGCCATTTCCAGTGTCCCTGGGGATGGTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CAA 72 bp | GTCAGAGACAGAGTCAGGGAGAGGCTACCCAGCATCTaGCTTGAGAGCAGGAGGGTGGTGAGGAGCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRDRVRERLPSI*LESRRVVRSTL Trigger: AAGAGTGCTCCTCACCACCCTCCTGCTCTCAAGCAAGATGCTGGGTAGCCTCTCCCTGACTCTGTCTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | TCAGACATCCTGGGCAGGACCCTTTCCAGGGCTGCAAAGGAAACAGAGAGACAGTCAGACTGGAGCTCTTaGAGCGCGACTTCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDILGRTLSRAAKETERQSDWSS*SATSCA Trigger: TGCGCAAGAAGTCGCGCTCCAAGAGCTCCAGTCTGA...CTGTCTCTCTGTTTCCTTTGCAGCCCTGGAAAGGGTCCTGCCCAGGATGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTCTGCTGTGGCTCTGCTGTCTCCAGGCAGGGACTGTGCACTAACACTCCCACGTGGAGCATCTTaGACACGACATCTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSAVALLSPGRDCALTLPRGAS*TRHLLL Trigger: CAGCAAAAGATGTCGTGTCCAAGATGCTCCACGTGG...GAGTGTTAGTGCACAGTCCCTGCCTGGAGACAGCAGAGCCACAGCAGAGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAATATGCTATACCACAGCAGGCAAATATGAGCAGAGATGCCAACACACCCGGGCACGTCTTGCTGTaGGGGCTCCTGGACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEYAIPQQANMSRDANTPGHVLL*GLLDQA Trigger: AGCCTGGTCCAGGAGCCCTCACAGCAAGACGTGCCC...GGGTGTGTTGGCATCTCTGCTCATATTTGCCTGCTGTGGTATAGCATATTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGGAGCACTCTTTGGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGATGATCCCCAGGCCATaGAGGTGGTCTAGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSTLWVIVDRARHLSWMMIPRP*RWSRAK Trigger: CTTGGCTCTAGACCACCTCCATGGCCTGGGGATCAT...CATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAGAGCAGGAGGGTGGTGAGGAGCACTCTTTGGGTGATTGTGGACAGAGCCAGTGCAGGTAGTCCATaGTCCTGGCGATGGTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LESRRVVRSTLWVIVDRASAGSP*SWRWYR Trigger: TCTATACCATCGCCAGGACCATGGACTACCTGCACT...GGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCACCACCCTCCTGCTCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCTGTCTAAGGCAAGGGGCTCAGGTGTCTCTCCTGTCCTCAGTCAAGAATCTTGTCATGGTCGGTaGCCTCCTTGCTCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FCLSKARGSGVSPVLSQESCHGR*PPCSSQ Trigger: TTGGCTTGAGCAAGGAGGCCACCGACCATGACAAGA...TTCTTGACTGAGGACAGGAGAGACACCTGAGCCCCTTGCCTTAGACAGGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CAA 72 bp | GCATCTAAGCTGGATGCTTTCACATGGCCACTGGCATaGCCAGAACATCCAGGAACATCCAGCTCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASKLDAFTWPLA*PEHPGTSSSAV Trigger: CACAGCAGAGCTGGATGTTCCTGGATGTTCTGGCAATGCCAGTGGCCATGTGAAAGCATCCAGCTTAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTCAGCCCAAACAGGGCAGGAGCTGCAGTGGGATAGCCCAAAAGTAGCTTTTAGTAGCTCGAACTaGGAGGGGTCTGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MFSAQTGQELQWDSPKVAFSSSN*EGSAFS Trigger: TGAGAAGGCAGACCCCTCCCAGTTCGAGCTACTAAA...AGCTACTTTTGGGCTATCCCACTGCAGCTCCTGCCCTGTTTGGGCTGAGAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGCTAGACAACAGAAACACAAGACTCAGGGGTATCGTCTaGGCCATTGGCAAACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLRRLQPENRLDNRNTRLRGIV*AIGKRS Trigger: ACTCCGTTTGCCAATGGCCCAGACGATACCCCTGAG...TCTTGTGTTTCTGTTGTCTAGCCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | CACCTCCCACATAAATATGTCATGAGAGTGGGAGGGAGATTGTTAGAAAGGAGGCTTTGGAAAGCCTGGTaGAGAGGTCACCTCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLPHKYVMRVGGRLLERRLWKAW*RGHLPA Trigger: TGCGGGGAGGTGACCTCTTCACCAGGCTTTCCAAAG...CCTCCTTTCTAACAATCTCCCTCCCACTCTCATGACATATTTATGTGGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232527.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGGAGCACTCTTTGGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGCTCGCACTTTCAAGGTaGCTTTCTTCAGGACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRSTLWVIVDRARHLSWMLALSR*LSSGPS Trigger: TGAAGGTCCTGAAGAAAGCCACCTTGAAAGTGCGAG...CATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | ATATCCAAAGACCAGTGCACACAGGTAGTTCAAAATCACACACGTTCCAACCATTGCTGTGAGGGCTCCTaGACCAGGCTGGAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ISKDQCTQVVQNHTRSNHCCEGS*TRLEAT Trigger: TGTGGCCTCCAGCCTGGTCCAGGAGCCCTCACAGCA...ATGGTTGGAACGTGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGACCATCCCCAGGGACACTGGAAATGGCACACAGTCTATCCCCACTCTGTGTACAGAATGTTACTTaGTTTCAGGTCCCGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRPSPGTLEMAHSLSPLCVQNVT*FQVPMD Trigger: GTCCATCGGGACCTGAAACCAAGTAACATTCTGTAC...ACAGAGTGGGGATAGACTGTGTGCCATTTCCAGTGTCCCTGGGGATGGTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGTGAATATGCTATACCACAGCAGGCAAATATGAGCAGAGATGCCAACTCCGCACTGAGGAACTaGGGCATACCCAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RESEYAIPQQANMSRDANSALRN*GIPSLA Trigger: AGCCAAGCTGGGTATGCCTCAGTTCCTCAGTGCGGA...GTTGGCATCTCTGCTCATATTTGCCTGCTGTGGTATAGCATATTCACTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGCTTTCACATGGCCACTATTCCAGTCTATGGTaGCAAAGAACGGGTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: WVIVDRARHLSWMLSHGHYSSLW*QRTGDV Trigger: AACGTCACCCGTTCTTTGTCACCATAGACTGGAATA...GTGGCCATGTGAAAGCATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCCCACATAAATATGTCATGAGAGTGGGAGGGAGATTGTTAGAAAGGAGGATGATCCCCAGGCCATaGAGGTGGTCTAGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLPHKYVMRVGGRLLERRMIPRP*RWSRAK Trigger: CTTGGCTCTAGACCACCTCCATGGCCTGGGGATCAT...CCTCCTTTCTAACAATCTCCCTCCCACTCTCATGACATATTTATGTGGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232527.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAATATGCTATACCACAGCAGGCAAATATGAGCAGAGATGCCAACACACCCAGAACCTGCGCACCGTaGACTTCTTCATGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEYAIPQQANMSRDANTPRTCAP*TSSCSA Trigger: AGCTGAGCATGAAGAAGTTCACGGTGCGCAGGTTCT...GGGTGTGTTGGCATCTCTGCTCATATTTGCCTGCTGTGGTATAGCATATTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR GCA 90 bp | CACCTCCCACATAAATATGTCATGAGAGTGGGAGGGAGATTGTTAGAAAGGAGGGAACTGGGAGGGGTCTaGCTTCTCAAAGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPHKYVMRVGGRLLERRELGGV*LLKAFL Trigger: AAGGAAGGCTTTGAGAAGGCAGACCCCTCCCAGTTC...CCTCCTTTCTAACAATCTCCCTCCCACTCTCATGACATATTTATGTGGGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232527.2 |
||
| CDS-3UTR CCA 90 bp | CACCTCCCACATAAATATGTCATGAGAGTGGGAGGGAGATTGTTAGAAAGGAGGTCTTGTCATGGTCGGTaGCCTCCTTGCTCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLPHKYVMRVGGRLLERRSCHGR*PPCSSQ Trigger: TTGGCTTGAGCAAGGAGGCCACCGACCATGACAAGA...CCTCCTTTCTAACAATCTCCCTCCCACTCTCATGACATATTTATGTGGGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232527.2 |
||
| CDS-3UTR GCA 90 bp | ATATCCAAAGACCAGTGCACACAGGTAGTTCAAAATCACACACGTTCCAACCATTGGAGCGCGACTTCTTaGGCAGGTACACGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISKDQCTQVVQNHTRSNHWSATS*AGTRRR Trigger: TCTTCTCCGTGTACCTGCGCAAGAAGTCGCGCTCCA...ATGGTTGGAACGTGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR GCA 90 bp | CACCTCCCACATAAATATGTCATGAGAGTGGGAGGGAGATTGTTAGAAAGGAGGGGATCAGGTAGAGCTTaGCTTCGGTCTGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPHKYVMRVGGRLLERRGSGRA*LRSERH Trigger: ATGCCTTTCAGACCGAAGGCAAGCTCTACCTGATCC...CCTCCTTTCTAACAATCTCCCTCCCACTCTCATGACATATTTATGTGGGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232527.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCCCTGCGCAGACTACAGCCTGAAAACAGGCTAGACAACAGAAACACAAGACACGACATCTTTTGCTaGATCAGATATGGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLRRLQPENRLDNRNTRHDIFC*IRYGVP Trigger: TGGGACTCCATATCTGATGCAGCAAAAGATGTCGTG...TCTTGTGTTTCTGTTGTCTAGCCTGTTTTCAGGCTGTAGTCTGCGCAGGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCCCACATAAATATGTCATGAGAGTGGGAGGGAGATTGTTAGAAAGGAGGTTTAGTAGCTCGAACTaGGAGGGGTCTGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLPHKYVMRVGGRLLERRFSSSN*EGSAFS Trigger: TGAGAAGGCAGACCCCTCCCAGTTCGAGCTACTAAA...CCTCCTTTCTAACAATCTCCCTCCCACTCTCATGACATATTTATGTGGGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232527.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTGGATTTCTATCAAGAATCGCAAGGATTCGGGCCCAGAACATTAACTAATCCTCTGAAGAGGTaGTGGGCGTTTGCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPLDFYQESQGFGPRTLTNPLKR*WAFALG Trigger: CCCAAGTGCAAACGCCCACCACCTCTTCAGAGGATT...AGTTAATGTTCTGGGCCCGAATCCTTGCGATTCTTGATAGAAATCCAGAGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTATACCACAGCAGGCAAATATGAGCAGAGATGCCAACACACCCAGCAATTTGCTGCATCAGATATaGAGTCCCAGTTTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YAIPQQANMSRDANTPSNLLHQI*SPSFPQ Trigger: CTGGGGGAAACTGGGACTCCATATCTGATGCAGCAA...ATTGCTGGGTGTGTTGGCATCTCTGCTCATATTTGCCTGCTGTGGTATAGCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CAA 72 bp | GAGCATCCTTCCAGACACTTCAAGGATGCGTTTGTTTaGACTGATGGTCTCCTCCATCTATTTGGCGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EHPSRHFKDAFV*TDGLLHLFGES Trigger: ACTCTCGCCAAATAGATGGAGGAGACCATCAGTCAAAACAAACGCATCCTTGAAGTGTCTGGAAGGATGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR TCA 90 bp | TATGCTATACCACAGCAGGCAAATATGAGCAGAGATGCCAACACACCCAGCAATGTGACAAAGAACGGGTaGCGTTTAATTTCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YAIPQQANMSRDANTPSNVTKNG*RLISST Trigger: AGTGGAGGAAATTAAACGTCACCCGTTCTTTGTCAC...ATTGCTGGGTGTGTTGGCATCTCTGCTCATATTTGCCTGCTGTGGTATAGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAGTTTGGAAAGCATAATAAATATCTGTACAGTGGCCGCCGTCTCAACACAGGATCAGGTAGAGCTTaGCTTCGGTCTGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKFGKHNKYLYSGRRLNTGSGRA*LRSERH Trigger: ATGCCTTTCAGACCGAAGGCAAGCTCTACCTGATCC...TGTGTTGAGACGGCGGCCACTGTACAGATATTTATTATGCTTTCCAAACTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAGTTTGGAAAGCATAATAAATATCTGTACAGTGGCCGCCGTCTCAACACACTGCTCAGCTGGTTTTaGGATAGGTACTCTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKFGKHNKYLYSGRRLNTLLSWF*DRYSLF Trigger: GAACAGAGAGTACCTATCCCAAAACCAGCTGAGCAG...TGTGTTGAGACGGCGGCCACTGTACAGATATTTATTATGCTTTCCAAACTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CAA 72 bp | GCCATGCCTTCTGTGTTCTGTTGTTCTTTCTTTTCATaGGAACATGTACACTTGAAGCTGCAAGCAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPSVFCCSFFS*EHVHLKLQANP Trigger: TGGGTTTGCTTGCAGCTTCAAGTGTACATGTTCCAATGAAAAGAAAGAACAACAGAACACAGAAGGCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| 3UTR CAA 72 bp | TCCCATGACAAATTCTGTAGCTACACAAGTAGTCATTaGTGTAGAGAATACAGAGCCTTTCCTCATGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHDKFCSYTSSH*CREYRAFPHVG Trigger: CCCAACATGAGGAAAGGCTCTGTATTCTCTACACAAATGACTACTTGTGTAGCTACAGAATTTGTCATGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCTGGAGCAAGGGTGCATGCCAGAGAGGCCCTCGGAGGGTGCCAGAGCTCCAGCACCTAGCCTGTaGCAGGGGTTCCGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EQLEQGCMPERPSEGARAPAPSL*QGFRLK Trigger: TTTCAAGCGGAACCCCTGCAACAGGCTAGGTGCTGG...AGCTCTGGCACCCTCCGAGGGCCTCTCTGGCATGCACCCTTGCTCCAGCTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCTGGAGCAAGGGTGCATGCCAGAGAGGCCCTCGGAGGGTGCCAGAGCTGGCTTGAAGGGTGGCTaGATCTCCTTGCGGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: EQLEQGCMPERPSEGARAGLKGG*ISLRYS Trigger: GCTGTACCGCAAGGAGATCAAGCCACCCTTCAAGCC...AGCTCTGGCACCCTCCGAGGGCCTCTCTGGCATGCACCCTTGCTCCAGCTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS TCA 90 bp | CATGGTCCTGGCGATGGTATAGAGCACATCACTGGCCTCACGCTCTaGGAAGCACCGCTGACGGAGGATACGGTCCAGCAGCTCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGPGDGIEHITGLTL*EAPLTEDTVQQLPA Trigger: GGCGGGGAGCTGCTGGACCGTATCCTCCGTCAGCGGTGCTTCTCAGAGCGTGAGGCCAGTGATGTGCTCTATACCATCGCCAGGACCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS CCA 90 bp | TGTTGTTCCCATGTAGCTGCTGCACAATTGGGTGAATGGGGGCCTTaGGCACGTCTTGCTGTGAGGGCTCCTGGACCAGGCTGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CCSHVAAAQLGEWGP*ARLAVRAPGPGWRP Trigger: TGGCCTCCAGCCTGGTCCAGGAGCCCTCACAGCAAGACGTGCCCAAGGCCCCCATTCACCCAATTGTGCAGCAGCTACATGGGAACAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS CCA 90 bp | CCTTCACAATGCCTTCTTCCTCGAGGCGACTCAGACTGGAGCTCTTaGAGCGCGACTTCTTGCGCAGGTACACGGAGAAGAACCTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSQCLLPRGDSDWSS*SATSCAGTRRRTCA Trigger: TGCGCAGGTTCTTCTCCGTGTACCTGCGCAAGAAGTCGCGCTCCAAGAGCTCCAGTCTGAGTCGCCTCGAGGAAGAAGGCATTGTGAAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS CCA 90 bp | GTTTCAGGTCCCGATGGACAACCCCTTGGGAGTGCAGGTAGTCCATaGTCCTGGCGATGGTATAGAGCACATCACTGGCCTCACGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSGPDGQPLGSAGSP*SWRWYRAHHWPHAL Trigger: CAGAGCGTGAGGCCAGTGATGTGCTCTATACCATCGCCAGGACCATGGACTACCTGCACTCCCAAGGGGTTGTCCATCGGGACCTGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTCCACTATCCTCAGCAGCCTCCAGAGAGACTTCAGGACACACAAGTCCTTGCAGGGGTTCCGCTaGAAAAGGGCCCTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PESTILSSLQRDFRTHKSLQGFR*KRALSR Trigger: CCTGCTCAGGGCCCTTTTCAAGCGGAACCCCTGCAA...GGACTTGTGTGTCCTGAAGTCTCTCTGGAGGCTGCTGAGGATAGTGGACTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS CCA 90 bp | TCGGTGCCTGTGGGGTCCTGTTCAGAGCAAAGTAGGTGGCCGCCATaGCACCCTTCACTAGATGGACATCCTGTCTGCTCAGCTGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVPVGSCSEQSRWPP*HPSLDGHPVCSAGF Trigger: AAAACCAGCTGAGCAGACAGGATGTCCATCTAGTGAAGGGTGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACCCCACAGGCACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATAGCCTGGTCCGTGTAACTACTGCTCCCTGCGCAGACTACAGCCTGAAACTCAGACTGGAGCTCTaGGAGCGCGACTTCTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSLVRVTTAPCADYSLKLRLEL*ERDFLR Trigger: GCGCAAGAAGTCGCGCTCCAAGAGCTCCAGTCTGAG...TTTCAGGCTGTAGTCTGCGCAGGGAGCAGTAGTTACACGGACCAGGCTATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCGACCAGGAGGAGTGGAGCACGCCACGGGGGAAGGGTCTCACTCGGTTACCTTCCTTCACATGGTaGCTAATGTCAATCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSDQEEWSTPRGKGLTRLPSFTW*LMSISF Trigger: GAAGGAGATTGACATTAGCAACCATGTGAAGGAAGG...TAACCGAGTGAGACCCTTCCCCCGTGGCGTGCTCCACTCCTCCTGGTCGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS CCA 90 bp | GCCGCCATGGCACCCTTCACTAGATGGACATCCTGTCTGCTCAGCTaGTTTTGGGATAGGTACTCTCTGTTCACGATCCACGGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAMAPFTRWTSCLLS*FWDRYSLFTIHGCF Trigger: GAAGCACCCGTGGATCGTGAACAGAGAGTACCTATCCCAAAACCAGCTGAGCAGACAGGATGTCCATCTAGTGAAGGGTGCCATGGCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCAGAGAGACTTCAGGACACACAAGTCCCTCCTCTCCGACCAGGAGGAGTATACCCAGCTTGGCTTaGAGGATGAGGGCCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASRETSGHTSPSSPTRRSIPSLA*RMRAIV Trigger: AACAATGGCCCTCATCCTCAAAGCCAAGCTGGGTAT...ACTCCTCCTGGTCGGAGAGGAGGGACTTGTGTGTCCTGAAGTCTCTCTGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS GCA 90 bp | AGTAGGTGGCCGCCATGGCACCCTTCACTAGATGGACATCCTGTCTaGTCAGCTGGTTTTGGGATAGGTACTCTCTGTTCACGATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SRWPPWHPSLDGHPV*SAGFGIGTLCSRST Trigger: CGTGGATCGTGAACAGAGAGTACCTATCCCAAAACCAGCTGAGCAGACAGGATGTCCATCTAGTGAAGGGTGCCATGGCGGCCACCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTCCACTATCCTCAGCAGCCTCCAGAGAGACTTCAGGACACACAAGTCCTCAGTGAAGTGGATGTaGTTCCCATGTAGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PESTILSSLQRDFRTHKSSVKWM*FPCSCC Trigger: GCAGCAGCTACATGGGAACAACATCCACTTCACTGA...GGACTTGTGTGTCCTGAAGTCTCTCTGGAGGCTGCTGAGGATAGTGGACTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTCCACTATCCTCAGCAGCCTCCAGAGAGACTTCAGGACACACAAGTCCTCCGAGGGGTCCCTTTaGCTCTTATCGATGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PESTILSSLQRDFRTHKSSEGSL*LLSMIF Trigger: GAAGATCATCGATAAGAGCAAAAGGGACCCCTCGGA...GGACTTGTGTGTCCTGAAGTCTCTCTGGAGGCTGCTGAGGATAGTGGACTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGCACTCTTTGGGTGATTGTGGACAGAGCCAGGCATCTAAGCTGGATGCGGGAGCTACAAAGTTaGCAGTATAGCAGGGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VRSTLWVIVDRARHLSWMRELQS*QYSRGS Trigger: TGACCCCCTGCTATACTGCAAACTTTGTAGCTCCCG...CATCCAGCTTAGATGCCTGGCTCTGTCCACAATCACCCAAAGAGTGCTCCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS-3UTR CAA 90 bp | CAGGTTCTGAGCCACAGTGGAGTGTCTTCTGACCTGAGTCCACTATCCTCAGCATCCACGTGGAGCATCTaGGACACGACATCTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: QVLSHSGVSSDLSPLSSASTWSI*DTTSFA Trigger: AGCAAAAGATGTCGTGTCCAAGATGCTCCACGTGGA...TGCTGAGGATAGTGGACTCAGGTCAGAAGACACTCCACTGTGGCTCAGAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 90 bp | ATGGCACCCTTCACTAGATGGACATCCTGTCTGCTCAGCTGGTTTTaGGATAGGTACTCTCTGTTCACGATCCACGGGTGCTTCAACACT | + |
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Preference number: 5 (lower is better) Translates to: MAPFTRWTSCLLSWF*DRYSLFTIHGCFNT Trigger: AGTGTTGAAGCACCCGTGGATCGTGAACAGAGAGTACCTATCCCAAAACCAGCTGAGCAGACAGGATGTCCATCTAGTGAAGGGTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS-3UTR CAA 90 bp | AGTGCCCATGAACAGGACCTATGTCTGGTGTCTGTGAGGCTGAGAGGACGTTGGTGTACAGAATGTTACTaGGTTTCAGGTCCCGATGGA | + |
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Preference number: 5 (lower is better) Translates to: SAHEQDLCLVSVRLRGRWCTECY*VSGPDG Trigger: TCCATCGGGACCTGAAACCAAGTAACATTCTGTACA...CCAACGTCCTCTCAGCCTCACAGACACCAGACATAGGTCCTGTTCATGGGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 90 bp | GATAGATTCGGGGTTTCCAGACTCATCCATGTACAGAATGTTACTTaGTTTCAGGTCCCGATGGACAACCCCTTGGGAGTGCAGGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: DRFGVSRLIHVQNVT*FQVPMDNPLGVQVV Trigger: GACTACCTGCACTCCCAAGGGGTTGTCCATCGGGACCTGAAACCAAGTAACATTCTGTACATGGATGAGTCTGGAAACCCCGAATCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCTCCTGTTCATTTCCCAGAGGACAGAATCCGTCACTAAGACTACCCACTGTGAACATCACCTCTTaGGAAAGCCTGGTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: QSSCSFPRGQNPSLRLPTVNITS*ESLVKR Trigger: CCTCTTCACCAGGCTTTCCAAAGAGGTGATGTTCAC...AGTGGGTAGTCTTAGTGACGGATTCTGTCCTCTGGGAAATGAACAGGAGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 90 bp | ACCTTTCCATACGACCCTTGTCCTAAAACCTTTAGTAGCTCGAACTaGGAGGGGTCTGCCTTCTCAAAGCCTTCCTTCACATGGTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: TFPYDPCPKTFSSSN*EGSAFSKPSFTWLL Trigger: TAGCAACCATGTGAAGGAAGGCTTTGAGAAGGCAGACCCCTCCCAGTTCGAGCTACTAAAGGTTTTAGGACAAGGGTCGTATGGAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024575.8 ENSMUST00000232527.2 |
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| CDS-3UTR CAA 90 bp | ATATCCAAAGACCAGTGCACACAGGTAGTTCAAAATCACACACGTTCCAACCATTTGGAGCGCGACTTCTaGCGCAGGTACACGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: ISKDQCTQVVQNHTRSNHLERDF*RRYTEK Trigger: CTTCTCCGTGTACCTGCGCAAGAAGTCGCGCTCCAA...ATGGTTGGAACGTGTGTGATTTTGAACTACCTGTGTGCACTGGTCTTTGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS-3UTR CAA 90 bp | GGAAAGTTTGGAAAGCATAATAAATATCTGTACAGTGGCCGCCGTCTCAACACAGGTGGCTTGATCTCCTaGCGGTACAGCTTATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GKFGKHNKYLYSGRRLNTGGLIS*RYSLFQ Trigger: CTGGAATAAGCTGTACCGCAAGGAGATCAAGCCACC...TGTGTTGAGACGGCGGCCACTGTACAGATATTTATTATGCTTTCCAAACTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS-3UTR CAA 90 bp | CACCTCCCACATAAATATGTCATGAGAGTGGGAGGGAGATTGTTAGAAAGGAGGCCTTCCTTCACATGGTaGCTAATGTCAATCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: HLPHKYVMRVGGRLLERRPSFTW*LMSISF Trigger: GAAGGAGATTGACATTAGCAACCATGTGAAGGAAGG...CCTCCTTTCTAACAATCTCCCTCCCACTCTCATGACATATTTATGTGGGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232527.2 |
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| CDS TCA 72 bp | AGCACATCACTGGCCTCACGCTCTGAGAAGCACCGCTaGCGGAGGATACGGTCCAGCAGCTCCCCGCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: STSLASRSEKHR*RRIRSSSSPPR Trigger: GCGAGGCGGGGAGCTGCTGGACCGTATCCTCCGTCAGCGGTGCTTCTCAGAGCGTGAGGCCAGTGATGTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | ATGGGGGCCTTGGGCACGTCTTGCTGTGAGGGCTCCTaGACCAGGCTGGAGGCCACAAAGCTGAATCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: MGALGTSCCEGS*TRLEATKLNPL Trigger: CAGAGGATTCAGCTTTGTGGCCTCCAGCCTGGTCCAGGAGCCCTCACAGCAAGACGTGCCCAAGGCCCCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | GCTGAATCCTCTGAAGAGGTGGTGGGCGTTTGCACTTaGGGGGACACCAGGAGAATCTGTGGGGGTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: AESSEEVVGVCT*GDTRRICGGPC Trigger: GCAAGGACCCCCACAGATTCTCCTGGTGTCCCCCCAAGTGCAAACGCCCACCACCTCTTCAGAGGATTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CAA 90 bp | TCCTTCACAATGCCTTCTTCCTCGAGGCGACTCAGACTGGAGCTCTaGGAGCGCGACTTCTTGCGCAGGTACACGGAGAAGAACCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SFTMPSSSRRLRLEL*ERDFLRRYTEKNLR Trigger: GCGCAGGTTCTTCTCCGTGTACCTGCGCAAGAAGTCGCGCTCCAAGAGCTCCAGTCTGAGTCGCCTCGAGGAAGAAGGCATTGTGAAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS GCA 72 bp | GTACAGCAGGATTCCCAAGCTCCAGACATCACACGCTaGATCGTAGCCTTGCCGCTTCAAGACCTCGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VQQDSQAPDITR*IVALPLQDLGS Trigger: GCTCCCGAGGTCTTGAAGCGGCAAGGCTACGATGCAGCGTGTGATGTCTGGAGCTTGGGAATCCTGCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | TGCCTTCTTCCTCGAGGCGACTCAGACTGGAGCTCTTaGAGCGCGACTTCTTGCGCAGGTACACGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CLLPRGDSDWSS*SATSCAGTRRR Trigger: TCTTCTCCGTGTACCTGCGCAAGAAGTCGCGCTCCAAGAGCTCCAGTCTGAGTCGCCTCGAGGAAGAAGGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | CCCCTTGGGAGTGCAGGTAGTCCATGGTCCTGGCGATaGTATAGAGCACATCACTGGCCTCACGCTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PLGSAGSPWSWR*YRAHHWPHALR Trigger: TCTCAGAGCGTGAGGCCAGTGATGTGCTCTATACCATCGCCAGGACCATGGACTACCTGCACTCCCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | GGACAACCCCTTGGGAGTGCAGGTAGTCCATGGTCCTaGCGATGGTATAGAGCACATCACTGGCCTCACGCT | + |
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Preference number: 6 (lower is better) Translates to: GQPLGSAGSPWS*RWYRAHHWPHA Trigger: AGCGTGAGGCCAGTGATGTGCTCTATACCATCGCCAGGACCATGGACTACCTGCACTCCCAAGGGGTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | CCCGATGGACAACCCCTTGGGAGTGCAGGTAGTCCATaGTCCTGGCGATGGTATAGAGCACATCACTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PDGQPLGSAGSP*SWRWYRAHHWP Trigger: AGGCCAGTGATGTGCTCTATACCATCGCCAGGACCATGGACTACCTGCACTCCCAAGGGGTTGTCCATCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | GCCGATCCTAGCCAGAATCTCCTCAGGGGTATCGTCTaGGCCATTGGCAAACGGAGTGAACCCAGCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ADPSQNLLRGIV*AIGKRSEPSQH Trigger: ATGCTGGCTGGGTTCACTCCGTTTGCCAATGGCCCAGACGATACCCCTGAGGAGATTCTGGCTAGGATCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CAA 72 bp | ATGCCTTCTTCCTCGAGGCGACTCAGACTGGAGCTCTaGGAGCGCGACTTCTTGCGCAGGTACACGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: MPSSSRRLRLEL*ERDFLRRYTEK Trigger: CTTCTCCGTGTACCTGCGCAAGAAGTCGCGCTCCAAGAGCTCCAGTCTGAGTCGCCTCGAGGAAGAAGGCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | CCTTCACAATGCCTTCTTCCTCGAGGCGACTCAGACTaGAGCTCTTGGAGCGCGACTTCTTGCGCAGGTACA | + |
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Preference number: 6 (lower is better) Translates to: PSQCLLPRGDSD*SSWSATSCAGT Trigger: TGTACCTGCGCAAGAAGTCGCGCTCCAAGAGCTCCAGTCTGAGTCGCCTCGAGGAAGAAGGCATTGTGAAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | GTGGGGTCCTGTTCAGAGCAAAGTAGGTGGCCGCCATaGCACCCTTCACTAGATGGACATCCTGTCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VGSCSEQSRWPP*HPSLDGHPVCS Trigger: TGAGCAGACAGGATGTCCATCTAGTGAAGGGTGCCATGGCGGCCACCTACTTTGCTCTGAACAGGACCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CAA 72 bp | CTAGCCAGAATCTCCTCAGGGGTATCGTCTGGGCCATaGGCAAACGGAGTGAACCCAGCCAGCATGGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LARISSGVSSGP*ANGVNPASMVY Trigger: GTACACCATGCTGGCTGGGTTCACTCCGTTTGCCAATGGCCCAGACGATACCCCTGAGGAGATTCTGGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CAA 72 bp | TCCCAAGCTCCAGACATCACACGCTGCATCGTAGCCTaGCCGCTTCAAGACCTCGGGAGCTACAAAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SQAPDITRCIVA*PLQDLGSYKVC Trigger: GCAAACTTTGTAGCTCCCGAGGTCTTGAAGCGGCAAGGCTACGATGCAGCGTGTGATGTCTGGAGCTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS GCA 72 bp | CCGCCATGGCACCCTTCACTAGATGGACATCCTGTCTaGTCAGCTGGTTTTGGGATAGGTACTCTCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PPWHPSLDGHPV*SAGFGIGTLCS Trigger: TGAACAGAGAGTACCTATCCCAAAACCAGCTGAGCAGACAGGATGTCCATCTAGTGAAGGGTGCCATGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | GCATCTTGGACACGACATCTTTTGCTGCATCAGATATaGAGTCCCAGTTTCCCCCAGAAAGGGCGTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASWTRHLLLHQI*SPSFPQKGRTS Trigger: GGAAGTACGCCCTTTCTGGGGGAAACTGGGACTCCATATCTGATGCAGCAAAAGATGTCGTGTCCAAGATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | TTCACTAGATGGACATCCTGTCTGCTCAGCTGGTTTTaGGATAGGTACTCTCTGTTCACGATCCACGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: FTRWTSCLLSWF*DRYSLFTIHGC Trigger: GCACCCGTGGATCGTGAACAGAGAGTACCTATCCCAAAACCAGCTGAGCAGACAGGATGTCCATCTAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | GCACCCTTCACTAGATGGACATCCTGTCTGCTCAGCTaGTTTTGGGATAGGTACTCTCTGTTCACGATCCAC | + |
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Preference number: 6 (lower is better) Translates to: APFTRWTSCLLS*FWDRYSLFTIH Trigger: GTGGATCGTGAACAGAGAGTACCTATCCCAAAACCAGCTGAGCAGACAGGATGTCCATCTAGTGAAGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS TCA 72 bp | CAATCTCCTCCGAGGGGTCCCTTTTGCTCTTATCGATaGTCTTCACAGCATACTCAGCATCCGTGGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QSPPRGPFCSYR*SSQHTQHPWLC Trigger: ACAAAGCCACGGATGCTGAGTATGCTGTGAAGATCATCGATAAGAGCAAAAGGGACCCCTCGGAGGAGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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| CDS CCA 72 bp | TACGACCCTTGTCCTAAAACCTTTAGTAGCTCGAACTaGGAGGGGTCTGCCTTCTCAAAGCCTTCCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: YDPCPKTFSSSN*EGSAFSKPSFT Trigger: TGTGAAGGAAGGCTTTGAGAAGGCAGACCCCTCCCAGTTCGAGCTACTAAAGGTTTTAGGACAAGGGTCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024575.8 ENSMUST00000232527.2 |
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| CDS CCA 72 bp | TGGGAGGGGTCTGCCTTCTCAAAGCCTTCCTTCACATaGTTGCTAATGTCAATCTCCTTCACAATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WEGSAFSKPSFT*LLMSISFTMPS Trigger: AGAAGGCATTGTGAAGGAGATTGACATTAGCAACCATGTGAAGGAAGGCTTTGAGAAGGCAGACCCCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024575.8 |
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