Pregenerated sensors for RPS29 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034892

Ensembl transcript IDs: ENSMUST00000037023.9

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 72 bp	CTTCACATTTTTATTCTTTGTGTACAAAGACTAGCATaGTCGGTTCCACTTGGTAGTAGTCAGTCGAATCCA	+
Preference number: 3 (lower is better) Translates to: LHIFILCVQRLA*SVPLGSSQSNP Trigger: TGGATTCGACTGACTACTACCAAGTGGAACCGATCATGCTAGTCTTTGTACACAAAGAATAAAAATGTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037023.9
CDS-3UTR CAA 90 bp	TCTTCACATTTTTATTCTTTGTGTACAAAGACTAGCATGATCGGTTCCACTTGGATGTTCAGCCCGTATTaGCGGATCAGACCGTGGCGG	+
Preference number: 5 (lower is better) Translates to: SSHFYSLCTKTSMIGSTWMFSPY*RIRPWR Trigger: CCGCCACGGTCTGATCCGCAAATACGGGCTGAACAT...CCAAGTGGAACCGATCATGCTAGTCTTTGTACACAAAGAATAAAAATGTGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037023.9

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu