RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025290

Ensembl transcript IDs: ENSMUST00000169826.3, ENSMUST00000223999.2, ENSMUST00000224568.2, ENSMUST00000225023.2

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTACCGGCCTCTTACACTGGGCTTTTCACCAAGCCCAGTGCACTTaGCTGCATCAACACCCAAGCAGCCACCTGATTCTTCTAATGCCC +
Preference number: 1 (lower is better)
Translates to: CTGLLHWAFHQAQCT*LHQHPSSHLILLMP
Trigger: GGGCATTAGAAGAATCAGGTGGCTGCTTGGGTGTTGATGCAGTCAAGTGCACTGGGCTTGGTGAAAAGCCCAGTGTAAGAGGCCGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR GCA 90 bp GTATCTGTTGCTGGACTGGTGACTATGGGCCACTGCCAGAACACTTaGTGCCAAGCCTGGAGTCCTAGCCCAAGACAGACTCAATTTCCA +
Preference number: 1 (lower is better)
Translates to: VSVAGLVTMGHCQNT*CQAWSPSPRQTQFP
Trigger: TGGAAATTGAGTCTGTCTTGGGCTAGGACTCCAGGCTTGGCAGCAAGTGTTCTGGCAGTGGCCCATAGTCACCAGTCCAGCAACAGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR CCA 90 bp CAGCTAGAGCTAGAGATCATCAAGCAGAGGGAGGAGAGGAAGGCCTaGCTTCTAAGAACAAAGTTGAAGGGGCTAGGGAGATGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: QLELEIIKQREERKA*LLRTKLKGLGRWLS
Trigger: GCTGAGCCATCTCCCTAGCCCCTTCAACTTTGTTCTTAGAAGCCAGGCCTTCCTCTCCTCCCTCTGCTTGATGATCTCTAGCTCTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR CCA 90 bp GACTCTGATCCCTCCCAATATCAGGCAAAGCAAAGTATCTGTTGCTaGACTGGTGACTATGGGCCACTGCCAGAACACTTGCTGCCAAGC +
Preference number: 1 (lower is better)
Translates to: DSDPSQYQAKQSICC*TGDYGPLPEHLLPS
Trigger: GCTTGGCAGCAAGTGTTCTGGCAGTGGCCCATAGTCACCAGTCCAGCAACAGATACTTTGCTTTGCCTGATATTGGGAGGGATCAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR GCA 90 bp CTTGACTCTGATCCCTCCCAATATCAGGCAAAGCAAAGTATCTGTTaGTGGACTGGTGACTATGGGCCACTGCCAGAACACTTGCTGCCA +
Preference number: 1 (lower is better)
Translates to: LDSDPSQYQAKQSIC*WTGDYGPLPEHLLP
Trigger: TGGCAGCAAGTGTTCTGGCAGTGGCCCATAGTCACCAGTCCAGCAACAGATACTTTGCTTTGCCTGATATTGGGAGGGATCAGAGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR TCA 90 bp TTCAAATCCCCCAACCACATGGTGGCTACACCTGCCCATGAGATCTaGCGCCCCCTTCTGATGTGTCTGAAGACAGCTAGTGTACTTATT +
Preference number: 1 (lower is better)
Translates to: FKSPNHMVATPAHEI*RPLLMCLKTASVLI
Trigger: AATAAGTACACTAGCTGTCTTCAGACACATCAGAAGGGGGCGTCAGATCTCATGGGCAGGTGTAGCCACCATGTGGTTGGGGGATTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR TCA 90 bp CTCTCCATCACCACCCTCTGCCAGGAAGGATCTGTACCGGCCTCTTACACTGGGCAAGCCCAGTGCACTTaGCTGCATCAACACCCAAGC +
Preference number: 2 (lower is better)
Translates to: LSITTLCQEGSVPASYTGQAQCT*LHQHPS
Trigger: GCTTGGGTGTTGATGCAGTCAAGTGCACTGGGCTTG...CCCAGTGTAAGAGGCCGGTACAGATCCTTCCTGGCAGAGGGTGGTGATGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR TCA 90 bp GTTCAGGCCAGCCTAGTCTACATGAGTTCCAGACCAGCTAGAGCTAGAGATCATGGGCTGGAGCAGGGTTaGCCGGAGCCAGCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: VQASLVYMSSRPARARDHGLEQG*PEPAEV
Trigger: GACCTCTGCTGGCTCCGGTCAACCCTGCTCCAGCCC...ATGATCTCTAGCTCTAGCTGGTCTGGAACTCATGTAGACTAGGCTGGCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR CAA 90 bp CTGTACCGGCCTCTTACACTGGGCTTTTCACCAAGCCCAGTGCACTaGACTGCATCAACACCCAAGCAGCCACCTGATTCTTCTAATGCC +
Preference number: 2 (lower is better)
Translates to: LYRPLTLGFSPSPVH*TASTPKQPPDSSNA
Trigger: GGCATTAGAAGAATCAGGTGGCTGCTTGGGTGTTGATGCAGTCAAGTGCACTGGGCTTGGTGAAAAGCCCAGTGTAAGAGGCCGGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR GCA 90 bp GCAGATTTAGCTTCAACTAAGGCCAAAAGCCAGATGTGGGGAACAAGGGAGACTTCCATCACCACCCTCTaGCAGGAAGGATCTGTACCG +
Preference number: 2 (lower is better)
Translates to: ADLASTKAKSQMWGTRETSITTL*QEGSVP
Trigger: CGGTACAGATCCTTCCTGGCAGAGGGTGGTGATGGA...AGTCTCCCTTGTTCCCCACATCTGGCTTTTGGCCTTAGTTGAAGCTAAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR TCA 90 bp AACACTTGCTGCCAAGCCTGGAGTCCTAGCCCAAGACAGACTCAATTTCCACTGGACACAGAAAGGTGTTaGGCAAAGACGATGCTAACA +
Preference number: 2 (lower is better)
Translates to: NTCCQAWSPSPRQTQFPLDTERC*AKTMLT
Trigger: TGTTAGCATCGTCTTTGCTCAACACCTTTCTGTGTC...CAGTGGAAATTGAGTCTGTCTTGGGCTAGGACTCCAGGCTTGGCAGCAAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR GCA 90 bp ATGTTCTCTCCATCACCACCCTCTGCCAGGAAGGATCTGTACCGGCCTCTTACAGTCCTCTCAGAAATCTaGACATCACAGCAAAACATC +
Preference number: 2 (lower is better)
Translates to: MFSPSPPSARKDLYRPLTVLSEI*TSQQNI
Trigger: GATGTTTTGCTGTGATGTGCAGATTTCTGAGAGGAC...TGTAAGAGGCCGGTACAGATCCTTCCTGGCAGAGGGTGGTGATGGAGAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR TCA 90 bp TGCATTTACAAGTCTGATTACCACATGGACCCATACAAATTGATAAAATACAGCCTGTTGCTGGACTGGTaGCTATGGGCCACTGCCAGA +
Preference number: 2 (lower is better)
Translates to: CIYKSDYHMDPYKLIKYSLLLDW*LWATAR
Trigger: TCTGGCAGTGGCCCATAGTCACCAGTCCAGCAACAG...GCTGTATTTTATCAATTTGTATGGGTCCATGTGGTAATCAGACTTGTAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR CCA 90 bp TGCATTTACAAGTCTGATTACCACATGGACCCATACAAATTGATAAAATACAGCGAGGAGAGGAAGGCCTaGCTTCTAAGAACAAAGTTG +
Preference number: 2 (lower is better)
Translates to: CIYKSDYHMDPYKLIKYSEERKA*LLRTKL
Trigger: CAACTTTGTTCTTAGAAGCCAGGCCTTCCTCTCCTC...GCTGTATTTTATCAATTTGTATGGGTCCATGTGGTAATCAGACTTGTAAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR GCA 90 bp AGACAGCTAGTGTACTTATTTGTAATAAATCTTTGGGCTGGAGCAGGGTTGACCATTGGTCCTACACTTTaGCCATGTAGTTATTTATGT +
Preference number: 2 (lower is better)
Translates to: RQLVYLFVINLWAGAGLTIGPTL*PCSYLC
Trigger: ACATAAATAACTACATGGGCAAAGTGTAGGACCAAT...GGTCAACCCTGCTCCAGCCCAAAGATTTATTACAAATAAGTACACTAGCTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR GCA 72 bp GCTGGACTGGTGACTATGGGCCACTGCCAGAACACTTaGTGCCAAGCCTGGAGTCCTAGCCCAAGACAGACT +
Preference number: 3 (lower is better)
Translates to: AGLVTMGHCQNT*CQAWSPSPRQT
Trigger: AGTCTGTCTTGGGCTAGGACTCCAGGCTTGGCAGCAAGTGTTCTGGCAGTGGCCCATAGTCACCAGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR CCA 72 bp CTGAAGGTCCTGAGTTCAAATCCCCCAACCACATGGTaGCTACACCTGCCCATGAGATCTGACGCCCCCTTC +
Preference number: 3 (lower is better)
Translates to: LKVLSSNPPTTW*LHLPMRSDAPF
Trigger: GAAGGGGGCGTCAGATCTCATGGGCAGGTGTAGCCACCATGTGGTTGGGGGATTTGAACTCAGGACCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR CCA 72 bp CTTCTGAAGGTCCTGAGTTCAAATCCCCCAACCACATaGTGGCTACACCTGCCCATGAGATCTGACGCCCCC +
Preference number: 3 (lower is better)
Translates to: LLKVLSSNPPTT*WLHLPMRSDAP
Trigger: GGGGGCGTCAGATCTCATGGGCAGGTGTAGCCACCATGTGGTTGGGGGATTTGAACTCAGGACCTTCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR CAA 90 bp GACTCTGATCCCTCCCAATATCAGGCAAAGCAAAGTATCTGTTGCTGGACTGGTTGGGCTGGAGCAGGGTaGACCGGAGCCAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: DSDPSQYQAKQSICCWTGWAGAG*TGASRG
Trigger: ACCTCTGCTGGCTCCGGTCAACCCTGCTCCAGCCCA...ACCAGTCCAGCAACAGATACTTTGCTTTGCCTGATATTGGGAGGGATCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR TCA 72 bp CCCAACCACATGGTGGCTACACCTGCCCATGAGATCTaGCGCCCCCTTCTGATGTGTCTGAAGACAGCTAGT +
Preference number: 3 (lower is better)
Translates to: PNHMVATPAHEI*RPLLMCLKTAS
Trigger: ACTAGCTGTCTTCAGACACATCAGAAGGGGGCGTCAGATCTCATGGGCAGGTGTAGCCACCATGTGGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR TCA 72 bp CAAATCCCCCAACCACATGGTGGCTACACCTGCCCATaGGATCTGACGCCCCCTTCTGATGTGTCTGAAGAC +
Preference number: 3 (lower is better)
Translates to: QIPQPHGGYTCP*DLTPPSDVSED
Trigger: GTCTTCAGACACATCAGAAGGGGGCGTCAGATCTCATGGGCAGGTGTAGCCACCATGTGGTTGGGGGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR GCA 72 bp AAAGTATCTGTTGCTGGACTGGTGACTATGGGCCACTaGCAGAACACTTGCTGCCAAGCCTGGAGTCCTAGC +
Preference number: 3 (lower is better)
Translates to: KVSVAGLVTMGH*QNTCCQAWSPS
Trigger: GCTAGGACTCCAGGCTTGGCAGCAAGTGTTCTGGCAGTGGCCCATAGTCACCAGTCCAGCAACAGATACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR-3UTR CAA 90 bp ATGGGCCACTGCCAGAACACTTGCTGCCAAGCCTGGAGTCCTAGCCCAAGACAGATTTGTAATAAATCTTaGGGCTGGAGCAGGGTTGAC +
Preference number: 3 (lower is better)
Translates to: MGHCQNTCCQAWSPSPRQICNKS*GWSRVD
Trigger: GTCAACCCTGCTCCAGCCCAAAGATTTATTACAAAT...CTGTCTTGGGCTAGGACTCCAGGCTTGGCAGCAAGTGTTCTGGCAGTGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR TCA 72 bp CTCTTACACTGGGCTTTTCACCAAGCCCAGTGCACTTaGCTGCATCAACACCCAAGCAGCCACCTGATTCTT +
Preference number: 3 (lower is better)
Translates to: LLHWAFHQAQCT*LHQHPSSHLIL
Trigger: AAGAATCAGGTGGCTGCTTGGGTGTTGATGCAGTCAAGTGCACTGGGCTTGGTGAAAAGCCCAGTGTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR GCA 72 bp GATCCCTCCCAATATCAGGCAAAGCAAAGTATCTGTTaGTGGACTGGTGACTATGGGCCACTGCCAGAACAC +
Preference number: 3 (lower is better)
Translates to: DPSQYQAKQSIC*WTGDYGPLPEH
Trigger: GTGTTCTGGCAGTGGCCCATAGTCACCAGTCCAGCAACAGATACTTTGCTTTGCCTGATATTGGGAGGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR GCA 72 bp CATGTAGTTATTTATGTTCTCTCCATCACCACCCTCTaGCAGGAAGGATCTGTACCGGCCTCTTACACTGGG +
Preference number: 3 (lower is better)
Translates to: HVVIYVLSITTL*QEGSVPASYTG
Trigger: CCCAGTGTAAGAGGCCGGTACAGATCCTTCCTGGCAGAGGGTGGTGATGGAGAGAACATAAATAACTACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR CAA 72 bp CCTCTTACACTGGGCTTTTCACCAAGCCCAGTGCACTaGACTGCATCAACACCCAAGCAGCCACCTGATTCT +
Preference number: 4 (lower is better)
Translates to: PLTLGFSPSPVH*TASTPKQPPDS
Trigger: AGAATCAGGTGGCTGCTTGGGTGTTGATGCAGTCAAGTGCACTGGGCTTGGTGAAAAGCCCAGTGTAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
CDS-3UTR GCA 90 bp GTGCACTTGACTGCATCAACACCCAAGCAGCCACCTGATTCTTCTAATGCCCAAAAGAATCATAGATCATaGCAAAGCCAGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VHLTASTPKQPPDSSNAQKNHRS*QSQWSC
Trigger: GCAAGACCACTGGCTTTGGCATGATCTATGATTCTT...TTGGGCATTAGAAGAATCAGGTGGCTGCTTGGGTGTTGATGCAGTCAAGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
CDS-3UTR GCA 90 bp ACAGCAAAACATCAAGTCACCGCAGATCTACTCCTTTGGCTGTATCCAATCTCCAAGAATCATAGATCATaGCAAAGCCAGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TAKHQVTADLLLWLYPISKNHRS*QSQWSC
Trigger: GCAAGACCACTGGCTTTGGCATGATCTATGATTCTT...GGAGATTGGATACAGCCAAAGGAGTAGATCTGCGGTGACTTGATGTTTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169826.3
ENSMUST00000223999.2
ENSMUST00000224568.2
CDS-3UTR GCA 90 bp ACATCACAGCAAAACATCAAGTCACCGCAGATCTACTCCTTTGGCTGTATCCAAAAGAATCATAGATCATaGCAAAGCCAGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TSQQNIKSPQIYSFGCIQKNHRS*QSQWSC
Trigger: GCAAGACCACTGGCTTTGGCATGATCTATGATTCTT...TTGGATACAGCCAAAGGAGTAGATCTGCGGTGACTTGATGTTTTGCTGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000169826.3
ENSMUST00000223999.2
ENSMUST00000224568.2
CDS-3UTR GCA 90 bp CATCACAGCAAAACATCAAGTCACCGCAGATCTACTCCTTTGGCTGTATCCAATAAGAATCATAGATCATaGCAAAGCCAGTGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HHSKTSSHRRSTPLAVSNKNHRS*QSQWSC
Trigger: GCAAGACCACTGGCTTTGGCATGATCTATGATTCTT...ATTGGATACAGCCAAAGGAGTAGATCTGCGGTGACTTGATGTTTTGCTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000169826.3
ENSMUST00000223999.2
ENSMUST00000224568.2
3UTR CAA 72 bp GCAGCAGAGCAGACGTGTAGGAGCTTTTTAGTTTATTaGTCCTCTCAGAAATCTGCACATCACAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: AAEQTCRSFLVY*SSQKSAHHSKT
Trigger: TGTTTTGCTGTGATGTGCAGATTTCTGAGAGGACAAATAAACTAAAAAGCTCCTACACGTCTGCTCTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2
3UTR CAA 72 bp TACTTATTTGTAATAAATCTTTGGGCTGGAGCAGGGTaGACCGGAGCCAGCAGAGGTCCTAAATTCAATTGT +
Preference number: 4 (lower is better)
Translates to: YLFVINLWAGAG*TGASRGPKFNC
Trigger: ACAATTGAATTTAGGACCTCTGCTGGCTCCGGTCAACCCTGCTCCAGCCCAAAGATTTATTACAAATAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225023.2