Pregenerated sensors for RPS18 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000008668

Ensembl transcript IDs: ENSMUST00000234380.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	AGCAGAAGACACTTCTTAATTAATACAGAAATCTGCCCGGCGTGGTaGTGCACGCCTTTAATCCCAGCGCTTGGGAGGCAGAGGCAGGCG	+
Preference number: 1 (lower is better) Translates to: SRRHFLINTEICPAW*CTPLIPALGRQRQA Trigger: CGCCTGCCTCTGCCTCCCAAGCGCTGGGATTAAAGGCGTGCACCACCACGCCGGGCAGATTTCTGTATTAATTAAGAAGTGTCTTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234380.2
3UTR CCA 72 bp	CACTTCTTAATTAATACAGAAATCTGCCCGGCGTGGTaGTGCACGCCTTTAATCCCAGCGCTTGGGAGGCAG	+
Preference number: 3 (lower is better) Translates to: HFLINTEICPAW*CTPLIPALGRQ Trigger: CTGCCTCCCAAGCGCTGGGATTAAAGGCGTGCACCACCACGCCGGGCAGATTTCTGTATTAATTAAGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234380.2
3UTR CCA 72 bp	AGACACTTCTTAATTAATACAGAAATCTGCCCGGCGTaGTGGTGCACGCCTTTAATCCCAGCGCTTGGGAGG	+
Preference number: 3 (lower is better) Translates to: RHFLINTEICPA*WCTPLIPALGR Trigger: CCTCCCAAGCGCTGGGATTAAAGGCGTGCACCACCACGCCGGGCAGATTTCTGTATTAATTAAGAAGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234380.2
3UTR GCA 72 bp	GTGAGCAGAAGACACTTCTTAATTAATACAGAAATCTaGCCGGCGTGGTGGTGCACGCCTTTAATCCCAGCG	+
Preference number: 3 (lower is better) Translates to: VSRRHFLINTEI*PAWWCTPLIPA Trigger: CGCTGGGATTAAAGGCGTGCACCACCACGCCGGGCAGATTTCTGTATTAATTAAGAAGTGTCTTCTGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234380.2

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