Pregenerated sensors for RPS15A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008683Ensembl transcript IDs: ENSMUST00000131374.8, ENSMUST00000172457.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGGAAGTCAGGGCTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: QGSQGWNSSRSGSRS*CRGHGGMLLACFPW Trigger: CCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGCCCTGACTTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR GCA 90 bp | CCTCCTTCCCTTGGGATCACCTCCAGGGAACTCAATAGAGCCACCTaGTTCTTATGGAAGATGGCAACGATGGTTGGGGCAGCTCATCCT | + |
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Preference number: 1 (lower is better) Translates to: PPSLGITSRELNRAT*FLWKMATMVGAAHP Trigger: AGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTCTATTGAGTTCCCTGGAGGTGATCCCAAGGGAAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CCA 90 bp | GGGAACTCAATAGAGCCACCTGCTTCTTATGGAAGATGGCAACGATaGTTGGGGCAGCTCATCCTGTCAGTCAAGGCAGGAGCAGCACCA | + |
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Preference number: 1 (lower is better) Translates to: GNSIEPPASYGRWQR*LGQLILSVKAGAAP Trigger: TGGTGCTGCTCCTGCCTTGACTGACAGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTCTATTGAGTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CCA 90 bp | GGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTaGCTTGCTTCCCCTGGCTTGTTCAGCTTGCTTACAGAACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: GQEAGADAEAMEECY*LASPGLFSLLTEPR Trigger: TCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CCA 90 bp | GGGGGCTGTAGGCAAAGACCCATACAGGAGGCCTGTGCTTCTCATTaGCAAATAAACCAGACTCACTGCACACTCAAGGGACCATCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GGCRQRPIQEACASH*QINQTHCTLKGPSC Trigger: ACAGGATGGTCCCTTGAGTGTGCAGTGAGTCTGGTTTATTTGCCAATGAGAAGCACAGGCCTCCTGTATGGGTCTTTGCCTACAGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CCA 90 bp | TCACCTCCAGGGAACTCAATAGAGCCACCTGCTTCTTATGGAAGATaGCAACGATGGTTGGGGCAGCTCATCCTGTCAGTCAAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SPPGNSIEPPASYGR*QRWLGQLILSVKAG Trigger: TCCTGCCTTGACTGACAGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTCTATTGAGTTCCCTGGAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | AGAGACCTTGTAAACTTTCCTGCATGGACAAATCATCAACAGATCTaGGCAAAGTCTGGGGGTAGAGATCCCCCAAGTTCGGCAGGTCGC | + |
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Preference number: 1 (lower is better) Translates to: RDLVNFPAWTNHQQI*AKSGGRDPPSSAGR Trigger: GCGACCTGCCGAACTTGGGGGATCTCTACCCCCAGACTTTGCTCAGATCTGTTGATGATTTGTCCATGCAGGAAAGTTTACAAGGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | ATGAGGAAGGGGACACAATCACTTTCCCTATGGCTAGGTAGGTATTaGGAATTCACCTGTCAGCCAGGCATGAAGGCTCAGGCTCATGCT | + |
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Preference number: 1 (lower is better) Translates to: MRKGTQSLSLWLGRY*EFTCQPGMKAQAHA Trigger: AGCATGAGCCTGAGCCTTCATGCCTGGCTGACAGGTGAATTCTCAATACCTACCTAGCCATAGGGAAAGTGATTGTGTCCCCTTCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | TCACTGCACACTCAAGGGACCATCCTGTCATTAACCACCTTATGCTaGTGTTACTGGCATACAACCCAAGCTGGAGGTGAAGTGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: SLHTQGTILSLTTLC*CYWHTTQAGGEVKT Trigger: TGTCTTCACTTCACCTCCAGCTTGGGTTGTATGCCAGTAACATCAGCATAAGGTGGTTAATGACAGGATGGTCCCTTGAGTGTGCAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR GCA 90 bp | ACAACGTTGCCATTCTATACAACATGTAGGCTCAGCAGGCAAAGGTaGTTGCTGCCAATCCTGACTGGATCCACTGTAAAGAGAACCATT | + |
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Preference number: 1 (lower is better) Translates to: TTLPFYTTCRLSRQR*LLPILTGSTVKRTI Trigger: AATGGTTCTCTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAGCCTACATGTTGTATAGAATGGCAACGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | GAAGACAATGGTCATGCTTTCAATATCTACATAAAACCTCACAGCTaGGCATCACCAGAAGTGTCACCAGTCAGCACAGCCAGCTACTCT | + |
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Preference number: 1 (lower is better) Translates to: EDNGHAFNIYIKPHS*ASPEVSPVSTASYS Trigger: AGAGTAGCTGGCTGTGCTGACTGGTGACACTTCTGGTGATGCTCAGCTGTGAGGTTTTATGTAGATATTGAAAGCATGACCATTGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR GCA 90 bp | GAGCAGCACCAAAATGAGGGAGGGTACAGCTTCCCACAAACTTTGTaGCTCACACACAGTAAACACTTTCAGTATTTTTGTCACAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: EQHQNEGGYSFPQTL*LTHSKHFQYFCHSN Trigger: GTTGCTGTGACAAAAATACTGAAAGTGTTTACTGTGTGTGAGGCACAAAGTTTGTGGGAAGCTGTACCCTCCCTCATTTTGGTGCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | CTACCAAGGAGACAGCAGAATTTGGTAAGTCTATTCATTTTGTGCTaGCCATCCAGGCCAGAGCACATTAGGCTCTTGATAGTGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: LPRRQQNLVSLFILC*PSRPEHIRLLIVFL Trigger: CAAGAACACTATCAAGAGCCTAATGTGCTCTGGCCTGGATGGTCAGCACAAAATGAATAGACTTACCAAATTCTGCTGTCTCCTTGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | GAAATTTCCACTGAACCTACAATAGTTTTTGGATGGAGGAATGAGTaGCAGGTAGGTGGGTTACATAGGGGGATGAACAATGCAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: EISTEPTIVFGWRNE*QVGGLHRGMNNAGM Trigger: CATGCCTGCATTGTTCATCCCCCTATGTAACCCACCTACCTGTCACTCATTCCTCCATCCAAAAACTATTGTAGGTTCAGTGGAAATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | GTCCGAGGGGCTTCTGTTGTTCTGAAGAGCCACGTGGGTGCTGAGTaGCCAAATGACTTGAATTTAATACCTATTTTAAATGTTATGGCA | + |
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Preference number: 1 (lower is better) Translates to: VRGASVVLKSHVGAE*PNDLNLIPILNVMA Trigger: TGCCATAACATTTAAAATAGGTATTAAATTCAAGTCATTTGGTCACTCAGCACCCACGTGGCTCTTCAGAACAACAGAAGCCCCTCGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | CCTTATGCTGATGTTACTGGCATACAACCCAAGCTGGAGGTGAAGTaGAGACAATGGTCATGCTTTCAATATCTACATAAAACCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: PYADVTGIQPKLEVK*RQWSCFQYLHKTSQ Trigger: CTGTGAGGTTTTATGTAGATATTGAAAGCATGACCATTGTCTTCACTTCACCTCCAGCTTGGGTTGTATGCCAGTAACATCAGCATAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CCA 90 bp | TATAATCCTAGAATTTGGGAGGCTAAGGCAGAAAGATTACAAGTCTaGGACCAACACTTCTTGCATTTGGCTAGCCCAGGAAAAATCCTA | + |
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Preference number: 1 (lower is better) Translates to: YNPRIWEAKAERLQV*DQHFLHLASPGKIL Trigger: TAGGATTTTTCCTGGGCTAGCCAAATGCAAGAAGTGTTGGTCCCAGACTTGTAATCTTTCTGCCTTAGCCTCCCAAATTCTAGGATTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | AACCACCTTATGCTGATGTTACTGGCATACAACCCAAGCTGGAGGTaGAGTGAAGACAATGGTCATGCTTTCAATATCTACATAAAACCT | + |
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Preference number: 1 (lower is better) Translates to: NHLMLMLLAYNPSWR*SEDNGHAFNIYIKP Trigger: AGGTTTTATGTAGATATTGAAAGCATGACCATTGTCTTCACTTCACCTCCAGCTTGGGTTGTATGCCAGTAACATCAGCATAAGGTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | AGCTTGTGTCAAGTTGACACAAAACCAGCCAGCACACTTCGTAAATaGAAAACCCATTTAATGTACTGCCATTCTACACAACGTTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: SLCQVDTKPASTLRK*KTHLMYCHSTQRCH Trigger: ATGGCAACGTTGTGTAGAATGGCAGTACATTAAATGGGTTTTTCATTTACGAAGTGTGCTGGCTGGTTTTGTGTCAACTTGACACAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | AGACCAAGAACCCAAAAAGGAATTTCAGTAACAACAGTTCAGCCCTaGTTCACCAAGAATGATGGTGACTCATCATCTTTGCTATCTATA | + |
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Preference number: 1 (lower is better) Translates to: RPRTQKGISVTTVQP*FTKNDGDSSSLLSI Trigger: TATAGATAGCAAAGATGATGAGTCACCATCATTCTTGGTGAATCAGGGCTGAACTGTTGTTACTGAAATTCCTTTTTGGGTTCTTGGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 90 bp | CATAAATTCGAGAAATTGAGTAAGAGGAGAGCACATAGGAGAGGTTaGATGAAAAGGACAGGGAGAGAGGCCAACATAATTGTATTTTAC | + |
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Preference number: 1 (lower is better) Translates to: HKFEKLSKRRAHRRG*MKRTGREANIIVFY Trigger: GTAAAATACAATTATGTTGGCCTCTCTCCCTGTCCTTTTCATTCAACCTCTCCTATGTGCTCTCCTCTTACTCAATTTCTCGAATTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACGGGACCAACACTTCTTaGATTTGGCTAGCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDGTNTS*IWLAQE Trigger: TTCCTGGGCTAGCCAAATGCAAGAAGTGTTGGTCCC...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACGCTAAAGGTATGGCCTaGGTGACTATGCCCCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDAKGMA*VTMPLY Trigger: ATAGAGGGGCATAGTCACCCAGGCCATACCTTTAGC...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACTGGCTAGGTAGGTATTaGGAATTCACCTGTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDWLGRY*EFTCQP Trigger: TGGCTGACAGGTGAATTCTCAATACCTACCTAGCCA...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACCTGGTTTCTCTCTGGTaGGGACTCAAGGTCAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDLVSLW*GLKVKR Trigger: TCTTTTGACCTTGAGTCCTCACCAGAGAGAAACCAG...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACTTCCTACACAAAACATaGCCACGAAGCAAGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDFLHKT*PRSKLG Trigger: CCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGGAA...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCTGGACATGCCTGCCATaGAATGCAAACACCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGWTCLP*NANTSG Trigger: CCCTGAGGTGTTTGCATTGCATGGCAGGCATGTCCA...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACGACCACGAAGCAAGTTaGGGAGGAAAGGGTTTATTC | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDDHEAS*GGKGLF Trigger: GAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTC...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACAAGCTGGAGGTGAAGTaGAGACAATGGTCATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDKLEVK*RQWSCF Trigger: AAAGCATGACCATTGTCTTCACTTCACCTCCAGCTT...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACGCCCCAAATACTTACTaGTTCTCTTTGCCCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDAPNTY*FSLPSF Trigger: GAATGAGGGCAAAGAGAAGCAGTAAGTATTTGGGGC...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACGCCTGTGCTTCTCATTaGCAAATAAACCAGACTCAC | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDACASH*QINQTH Trigger: GTGAGTCTGGTTTATTTGCCAATGAGAAGCACAGGC...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 90 bp | CTGACACTGGACTTTCCTAAACAGCCAACTGCCAGACTAGGGGACTaGAGATCCACTTTCCCAGGCTCCTCCTTCCCTTGGGATCACCTC | + |
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Preference number: 2 (lower is better) Translates to: LTLDFPKQPTARLGD*RSTFPGSSFPWDHL Trigger: GAGGTGATCCCAAGGGAAGGAGGAGCCTGGGAAAGTGGATCTCAAGTCCCCTAGTCTGGCAGTTGGCTGTTTAGGAAAGTCCAGTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 90 bp | GCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCTTGTTCAGCTaGCTTACAGAACCCAGAATTACCAGCCCAGAGATGGCACCACCC | + |
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Preference number: 2 (lower is better) Translates to: AMEECYWLASPGLFS*LTEPRITSPEMAPP Trigger: GGGTGGTGCCATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCAGGCAAAGGTGCTTGCTGCCAATCCTGACTGGATCCACTGTAAAGAGAGGGCTTCTGTTGTTCTaGAGAGCCACGTGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSRQRCLLPILTGSTVKRGLLLF*RATWVL Trigger: CAGCACCCACGTGGCTCTTCAGAACAACAGAAGCCC...TCTCTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTAAGGTATGGCCTGGGTaGCTATGCCCCTCTATGAGG | + |
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Preference number: 2 (lower is better) Translates to: LKQVRKQELMQRPWRNVTKVWPG*LCPSMR Trigger: CCTCATAGAGGGGCATAGTCACCCAGGCCATACCTT...AGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCCTGGTTTCTCTCTGGTaGGGACTCAAGGTCAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGLVSLW*GLKVKR Trigger: TCTTTTGACCTTGAGTCCTCACCAGAGAGAAACCAG...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCCACAGCCAGCTACTCTaGTGCAGAGATTCAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGHSQLL*CRDSKG Trigger: TCCTTTTGAATCTCTGCAGCAGAGTAGCTGGCTGTG...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCAAGAGGGGAAAATGGTaGTGGAGAAATGGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGKRGKW*WRNGSE Trigger: CTCTGAGCCATTTCTCCAGCACCATTTTCCCCTCTT...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCAGTCCGGACTCCACATCTTCTTCCCAGAAGCATTCAGACTCCCTCTCAGTCAAAAGAGGGAGGTaGGAGGGAGAATGGGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: QVSPDSTSSSQKHSDSLSVKRGR*EGEWGG Trigger: TCCACCCCATTCTCCCTCCCACCTCCCTCTTTTGAC...TGAGAGGGAGTCTGAATGCTTCTGGGAAGAAGATGTGGAGTCCGGACTGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACACCCATTTAATGTACTaGCATTCTACACAACGTTGC | + |
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Preference number: 2 (lower is better) Translates to: PHPQACTSTLEGQRRVSDTHLMY*HSTQRC Trigger: GCAACGTTGTGTAGAATGGCAGTACATTAAATGGGT...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCAGTCCGGACTCCACATCTTCTTCCCAGAAGCATTCAGACTCCCTCTCACAAGGAAGTCAGGGCTaGAACTCAAGCAGGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QVSPDSTSSSQKHSDSLSQGSQG*NSSRSG Trigger: TCCTGACCTGCTTGAGTTCCAGCCCTGACTTCCTTG...TGAGAGGGAGTCTGAATGCTTCTGGGAAGAAGATGTGGAGTCCGGACTGACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 90 bp | GATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCTaGTTCAGCTTGCTTACAGAACCCAGAATTACCAGCCCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: DAEAMEECYWLASPG*FSLLTEPRITSPEM Trigger: CATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGCTAAAGGTATGGCCTaGGTGACTATGCCCCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: LKQVRKQELMQRPWRNVTAKGMA*VTMPLY Trigger: ATAGAGGGGCATAGTCACCCAGGCCATACCTTTAGC...AGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 90 bp | AGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTaGCTTCCCCTGGCTTGTTCAGCTTGCTTACAGAACCCAGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: RKQELMQRPWRNVTG*LPLACSACLQNPEL Trigger: TAATTCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCCCACTAATCTACAAATaGGCAAGCTTAACTTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGPLIYK*ASLTSY Trigger: GTAGGAAGTTAAGCTTGCTCATTTGTAGATTAGTGG...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTGGAGAAATGGCTCAGAGAAATAGCTGCTCTTCTAGAGGATGTAGGTTTGCCTGTCAGCCAGGCATaGAGGCTCAGGCTCATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: VLEKWLREIAALLEDVGLPVSQA*RLRLML Trigger: AAGCATGAGCCTGAGCCTTCATGCCTGGCTGACAGG...CAAACCTACATCCTCTAGAAGAGCAGCTATTTCTCTGAGCCATTTCTCCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTTGCTTACAGAACCCAGAATTACCAGCCCAGAGATGGCACCACCCACAAGAGGCATTTCCTCAACTaGACTCCAGCTTGTGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QLAYRTQNYQPRDGTTHKRHFLN*TPACVK Trigger: CTTGACACAAGCTGGAGTTCAGTTGAGGAAATGCCT...CTTGTGGGTGGTGCCATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTTGCTTACAGAACCCAGAATTACCAGCCCAGAGATGGCACCACCCACAAGCACAGCCAGCTACTCTaGTGCAGAGATTCAAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QLAYRTQNYQPRDGTTHKHSQLL*CRDSKG Trigger: TCCTTTTGAATCTCTGCAGCAGAGTAGCTGGCTGTG...CTTGTGGGTGGTGCCATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTAAGAGGGGAAAATGGTaGTGGAGAAATGGCTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LKQVRKQELMQRPWRNVTKRGKW*WRNGSE Trigger: CTCTGAGCCATTTCTCCAGCACCATTTTCCCCTCTT...AGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTTGCTTACAGAACCCAGAATTACCAGCCCAGAGATGGCACCACCCACAAGCATTTCTCGACAGCTTaGCCTCAATCAAGGCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QLAYRTQNYQPRDGTTHKHFSTA*PQSRQK Trigger: CTTTTGCCTTGATTGAGGTCAAGCTGTCGAGAAATG...CTTGTGGGTGGTGCCATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCCCTTGTAAACTTTCCTaGATGGACAAATCATCAACA | + |
|
Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGPCKLS*MDKSST Trigger: TGTTGATGATTTGTCCATGCAGGAAAGTTTACAAGG...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCTATAATCCTAGAATTTaGGAGGCTAAGGCAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGYNPRI*EAKAER Trigger: TCTTTCTGCCTTAGCCTCCCAAATTCTAGGATTATA...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTGCTTACAGAACCCAGAATTACCAGCCCAGAGATGGCACCACCCACAAGATGGTGCTGGAGAAATaGCTCAGAGAAATAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QLAYRTQNYQPRDGTTHKMVLEK*LREIAA Trigger: AGCAGCTATTTCTCTGAGCCATTTCTCCAGCACCAT...CTTGTGGGTGGTGCCATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCGACAGCTTGACCTCAATCAAGGCAAAAGCTTACACGTGCATACATTTAGTCCTGTCAGCCAGGCATaGAGGCTCAGGCTCATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SRQLDLNQGKSLHVHTFSPVSQA*RLRLML Trigger: AAGCATGAGCCTGAGCCTTCATGCCTGGCTGACAGG...ACTAAATGTATGCACGTGTAAGCTTTTGCCTTGATTGAGGTCAAGCTGTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTATGCCTGCCATGCAATaGAAACACCTCAGGGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVMPAMQ*KHLRGP Trigger: TGGCCCCCTGAGGTGTTTGCATTGCATGGCAGGCAT...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTCAAGTGATAATCCCCTaGGGCACCCCACTTGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVQVIIP*GTPLAV Trigger: CACAGCAAGTGGGGTGCCGCAGGGGATTATCACTTG...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCGCAAAAGCTTACACGTaGATACATTTAGTAGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: AGADAEAMEECYWLASPGAKAYT*IHLVVY Trigger: GTAAACTACTAAATGTATGCACGTGTAAGCTTTTGC...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTATAACTTCCCTTCCCCTCATCTCTCTGCTTCAGGCCCCAAATACTTACTGCGGGACCAACACTTCTTaGATTTGGCTAGCCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: IITSLPLISLLQAPNTYCGTNTS*IWLAQE Trigger: TTCCTGGGCTAGCCAAATGCAAGAAGTGTTGGTCCC...GCAGTAAGTATTTGGGGCCTGAAGCAGAGAGATGAGGGGAAGGGAAGTTATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTGCTTACAGAACCCAGAATTACCAGCCCAGAGATGGCACCACCCACAAGTTGATACCCAAGAAATaGCATTTTTCAGGGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QLAYRTQNYQPRDGTTHKLIPKK*HFSGLR Trigger: TCTCAGCCCTGAAAAATGCCATTTCTTGGGTATCAA...CTTGTGGGTGGTGCCATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTAACACCTCTCCTGCTTaGGCACTGCACCCATGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVNTSPA*ALHPCS Trigger: ACTACATGGGTGCAGTGCCCAAGCAGGAGAGGTGTT...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CAA 90 bp | CAGGAGCAGCACCAAAATGAGGGAGGGTACAGCTTCCCACAAACTTaGTGCCTCACACACAGTAAACACTTTCAGTATTTTTGTCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: QEQHQNEGGYSFPQT*CLTHSKHFQYFCHS Trigger: GCTGTGACAAAAATACTGAAAGTGTTTACTGTGTGTGAGGCACAAAGTTTGTGGGAAGCTGTACCCTCCCTCATTTTGGTGCTGCTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CAA 90 bp | ACGTTGCCATTCTATACAACATGTAGGCTCAGCAGGCAAAGGTGCTaGCTGCCAATCCTGACTGGATCCACTGTAAAGAGAACCATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TLPFYTTCRLSRQRC*LPILTGSTVKRTIS Trigger: AGAAATGGTTCTCTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAGCCTACATGTTGTATAGAATGGCAACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGGTACAGCTTCCCACAAACTTTGTGCCTCACACACAGTAAACACTTTCAGACTAACCATGGACAGTaGAACCAGAGCCATACCAAT | + |
|
Preference number: 2 (lower is better) Translates to: GGYSFPQTLCLTHSKHFQTNHGQ*NQSHTN Trigger: ATTGGTATGGCTCTGGTTTCACTGTCCATGGTTAGT...CTGAAAGTGTTTACTGTGTGTGAGGCACAAAGTTTGTGGGAAGCTGTACCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAATGTACTGCCATTCTACACAACGTTGCCATTCTATACAACATGTAGGCTCAGGGCTTCTGTTGTTCTaGAGAGCCACGTGGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LMYCHSTQRCHSIQHVGSGLLLF*RATWVL Trigger: CAGCACCCACGTGGCTCTTCAGAACAACAGAAGCCC...TGAGCCTACATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTGCATGGACAAATCATCAACAGATCTGAGCAAAGTCTGGGGGTAGAGATCAGCCAGCTACTCTGCTaGAGAGATTCAAAAGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: FLHGQIINRSEQSLGVEISQLLC*RDSKGL Trigger: CAGTCCTTTTGAATCTCTGCAGCAGAGTAGCTGGCT...GATCTCTACCCCCAGACTTTGCTCAGATCTGTTGATGATTTGTCCATGCAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTATAACTTCCCTTCCCCTCATCTCTCTGCTTCAGGCCCCAAATACTTACTGCAGCCAGCTACTCTGCTaGAGAGATTCAAAAGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: IITSLPLISLLQAPNTYCSQLLC*RDSKGL Trigger: CAGTCCTTTTGAATCTCTGCAGCAGAGTAGCTGGCT...GCAGTAAGTATTTGGGGCCTGAAGCAGAGAGATGAGGGGAAGGGAAGTTATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGCAGGCAAAGGTGCTTGCTGCCAATCCTGACTGGATCCACTGTAAAGAGATTGATACCCAAGAAATaGCATTTTTCAGGGCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSRQRCLLPILTGSTVKRLIPKK*HFSGLR Trigger: TCTCAGCCCTGAAAAATGCCATTTCTTGGGTATCAA...TCTCTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCACTTTCATTTTACAGTTTATCCCAAGCCTGACCACAGTACTAGAACATGATGGCAACGATGGTTaGGGCAGCTCATCCTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: STTFILQFIPSLTTVLEHDGNDG*GSSSCQ Trigger: CTGACAGGATGAGCTGCCCCAACCATCGTTGCCATC...ATGTTCTAGTACTGTGGTCAGGCTTGGGATAAACTGTAAAATGAAAGTGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTCTGATGCAGAGGCCATaGAGGAATGTTACTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVLMQRP*RNVTGL Trigger: CAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAG...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACTAATTAAGTGGGCCTGGTTTCTCTCTGGTGAGGACTCAAGGTCAAAAGAGAATCATCAACAGATCTaGGCAAAGTCTGGGGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: ELIKWAWFLSGEDSRSKENHQQI*AKSGGR Trigger: TCTACCCCCAGACTTTGCTCAGATCTGTTGATGATT...CTCTTTTGACCTTGAGTCCTCACCAGAGAGAAACCAGGCCCACTTAATTAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTGCATGGACAAATCATCAACAGATCTGAGCAAAGTCTGGGGGTAGAGATCATCTGGGAGACAAAGTaGAGACAGATACCCTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FLHGQIINRSEQSLGVEIIWETK*RQIPWN Trigger: ATTCCAGGGTATCTGTCTGCACTTTGTCTCCCAGAT...GATCTCTACCCCCAGACTTTGCTCAGATCTGTTGATGATTTGTCCATGCAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCGACAGCTTGACCTCAATCAAGGCAAAAGCTTACACGTGCATACATTTAGTGTGTTCCTGTGGACATaGCTGCCATGCAATGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SRQLDLNQGKSLHVHTFSVFLWT*LPCNAN Trigger: GTTTGCATTGCATGGCAGGCATGTCCACAGGAACAC...ACTAAATGTATGCACGTGTAAGCTTTTGCCTTGATTGAGGTCAAGCTGTCGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAAATTAATCAAGGATCTCCAGATAAACCAAAGATGTAGCCAAGAGAGATGCGGCTCCTCCTTCCCTTaGGATCACCTCCAGGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: FKLIKDLQINQRCSQERCGSSFP*DHLQGT Trigger: AGTTCCCTGGAGGTGATCCCAAGGGAAGGAGGAGCC...GCATCTCTCTTGGCTACATCTTTGGTTTATCTGGAGATCCTTGATTAATTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTTGTCCCTTCATACTTCTTCACTGACCAAAAGCCCAAGCTAAAGGTATGGTTTAATCCTAGCAGTTaGGAGGCAGAGGCAAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: VLVPSYFFTDQKPKLKVWFNPSS*EAEASR Trigger: TCTGCTTGCCTCTGCCTCCCAACTGCTAGGATTAAA...CCATACCTTTAGCTTGGGCTTTTGGTCAGTGAAGAAGTATGAAGGGACAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTATAACTTCCCTTCCCCTCATCTCTCTGCTTCAGGCCCCAAATACTTACTGCAGGGGAAAATGGTGCTaGAGAAATGGCTCAGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: IITSLPLISLLQAPNTYCRGKWC*RNGSEK Trigger: TTTCTCTGAGCCATTTCTCCAGCACCATTTTCCCCT...GCAGTAAGTATTTGGGGCCTGAAGCAGAGAGATGAGGGGAAGGGAAGTTATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTGCATGGACAAATCATCAACAGATCTGAGCAAAGTCTGGGGGTAGAGATCTTAACCACCTTATGCTaGTGTTACTGGCATACAACC | + |
|
Preference number: 2 (lower is better) Translates to: FLHGQIINRSEQSLGVEILTTLC*CYWHTT Trigger: GGTTGTATGCCAGTAACATCAGCATAAGGTGGTTAA...GATCTCTACCCCCAGACTTTGCTCAGATCTGTTGATGATTTGTCCATGCAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTCATTTCTCGACAGCTTaGCCTCAATCAAGGCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVHFSTA*PQSRQK Trigger: CTTTTGCCTTGATTGAGGTCAAGCTGTCGAGAAATG...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAATGTACTGCCATTCTACACAACGTTGCCATTCTATACAACATGTAGGCTCATGGACATGCCTGCCATaGAATGCAAACACCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LMYCHSTQRCHSIQHVGSWTCLP*NANTSG Trigger: CCCTGAGGTGTTTGCATTGCATGGCAGGCATGTCCA...TGAGCCTACATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTAGGGGAAAATGGTGCTaGAGAAATGGCTCAGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVRGKWC*RNGSEK Trigger: TTTCTCTGAGCCATTTCTCCAGCACCATTTTCCCCT...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCACTTTCATTTTACAGTTTATCCCAAGCCTGACCACAGTACTAGAACATCTGATGCAGAGGCCATaGAGGAATGTTACTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: STTFILQFIPSLTTVLEHLMQRP*RNVTGL Trigger: CAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAG...ATGTTCTAGTACTGTGGTCAGGCTTGGGATAAACTGTAAAATGAAAGTGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCGACAGCTTGACCTCAATCAAGGCAAAAGCTTACACGTGCATACATTTAGTAAGCTGGAGGTGAAGTaGAGACAATGGTCATGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SRQLDLNQGKSLHVHTFSKLEVK*RQWSCF Trigger: AAAGCATGACCATTGTCTTCACTTCACCTCCAGCTT...ACTAAATGTATGCACGTGTAAGCTTTTGCCTTGATTGAGGTCAAGCTGTCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTGGAGAAATGGCTCAGAGAAATAGCTGCTCTTCTAGAGGATGTAGGTTTGCAACATATCAAACACTaGCACTGGACTTTCCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VLEKWLREIAALLEDVGLQHIKH*HWTFLN Trigger: GTTTAGGAAAGTCCAGTGTCAGTGTTTGATATGTTG...CAAACCTACATCCTCTAGAAGAGCAGCTATTTCTCTGAGCCATTTCTCCAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACTAATTAAGTGGGCCTGGTTTCTCTCTGGTGAGGACTCAAGGTCAAAAGAGCCACTAATCTACAAATaGGCAAGCTTAACTTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ELIKWAWFLSGEDSRSKEPLIYK*ASLTSY Trigger: GTAGGAAGTTAAGCTTGCTCATTTGTAGATTAGTGG...CTCTTTTGACCTTGAGTCCTCACCAGAGAGAAACCAGGCCCACTTAATTAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAATGTACTGCCATTCTACACAACGTTGCCATTCTATACAACATGTAGGCTCAGTGTTCCTGTGGACATaGCTGCCATGCAATGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LMYCHSTQRCHSIQHVGSVFLWT*LPCNAN Trigger: GTTTGCATTGCATGGCAGGCATGTCCACAGGAACAC...TGAGCCTACATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTGTAGAACTAATTAAGTaGGCCTGGTTTCTCTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVVELIK*AWFLSG Trigger: ACCAGAGAGAAACCAGGCCCACTTAATTAGTTCTAC...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTTGTCCCTTCATACTTCTTCACTGACCAAAAGCCCAAGCTAAAGGTATGGCAACATATCAAACACTaGCACTGGACTTTCCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VLVPSYFFTDQKPKLKVWQHIKH*HWTFLN Trigger: GTTTAGGAAAGTCCAGTGTCAGTGTTTGATATGTTG...CCATACCTTTAGCTTGGGCTTTTGGTCAGTGAAGAAGTATGAAGGGACAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTATAACTTCCCTTCCCCTCATCTCTCTGCTTCAGGCCCCAAATACTTACTGCTGTGTAGAGTACACATaGTACTCTAAATTGCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: IITSLPLISLLQAPNTYCCVEYT*YSKLQC Trigger: ACACTGCAATTTAGAGTATCATGTGTACTCTACACA...GCAGTAAGTATTTGGGGCCTGAAGCAGAGAGATGAGGGGAAGGGAAGTTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCACTTTCATTTTACAGTTTATCCCAAGCCTGACCACAGTACTAGAACATTTAACCACCTTATGCTaGTGTTACTGGCATACAACC | + |
|
Preference number: 2 (lower is better) Translates to: STTFILQFIPSLTTVLEHLTTLC*CYWHTT Trigger: GGTTGTATGCCAGTAACATCAGCATAAGGTGGTTAA...ATGTTCTAGTACTGTGGTCAGGCTTGGGATAAACTGTAAAATGAAAGTGGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTTGTGTAGAGTACACATaGTACTCTAAATTGCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PTQNMTTKQVGEERVYSVCVEYT*YSKLQC Trigger: ACACTGCAATTTAGAGTATCATGTGTACTCTACACA...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCACTTTCATTTTACAGTTTATCCCAAGCCTGACCACAGTACTAGAACATTATAATCCTAGAATTTaGGAGGCTAAGGCAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: STTFILQFIPSLTTVLEHYNPRI*EAKAER Trigger: TCTTTCTGCCTTAGCCTCCCAAATTCTAGGATTATA...ATGTTCTAGTACTGTGGTCAGGCTTGGGATAAACTGTAAAATGAAAGTGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAAATTAATCAAGGATCTCCAGATAAACCAAAGATGTAGCCAAGAGAGATGCCCTTGTAAACTTTCCTaGATGGACAAATCATCAACA | + |
|
Preference number: 2 (lower is better) Translates to: FKLIKDLQINQRCSQERCPCKLS*MDKSST Trigger: TGTTGATGATTTGTCCATGCAGGAAAGTTTACAAGG...GCATCTCTCTTGGCTACATCTTTGGTTTATCTGGAGATCCTTGATTAATTTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCACCCCCAGGCGTGTACAAGCACACTTGAAGGCCAGAGGAGGGTGTCAGACAGGCTCCTCCTTCCCTaGGGATCACCTCCAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PHPQACTSTLEGQRRVSDRLLLP*GSPPGN Trigger: GTTCCCTGGAGGTGATCCCAAGGGAAGGAGGAGCCT...GTCTGACACCCTCCTCTGGCCTTCAAGTGTGCTTGTACACGCCTGGGGGTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | TGTGAGCAGCCCGACGGAGGTGCTGGGGACCGAACCTaGATCCACTCAGGAGCAGCAAGTGCTCTTAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: CEQPDGGAGDRT*IHSGAASALNN Trigger: GTTGTTAAGAGCACTTGCTGCTCCTGAGTGGATTCAGGTTCGGTCCCCAGCACCTCCGTCGGGCTGCTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | CAGGGCTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGGCCATGGAGGAATGTTACTGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QGWNSSRSGSRS*CRGHGGMLLAC Trigger: GCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | GTACGAGTGGTGAGAACTATGGTGTTCCTGTGGACATaGCTGCCATGCAATGCAAACACCTCAGGGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VRVVRTMVFLWT*LPCNANTSGGQ Trigger: CTGGCCCCCTGAGGTGTTTGCATTGCATGGCAGGCATGTCCACAGGAACACCATAGTTCTCACCACTCGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | AGCCACCTGCTTCTTATGGAAGATGGCAACGATGGTTaGGGCAGCTCATCCTGTCAGTCAAGGCAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SHLLLMEDGNDG*GSSSCQSRQEQ Trigger: CTGCTCCTGCCTTGACTGACAGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | CAAGTTCGGCAGGTCGCAGAGCAGAGCTCATCAGCATaGCAGGACACAGCACCAGTTGTAGCGTTTTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QVRQVAEQSSSA*QDTAPVVAFSQ Trigger: TTGAGAAAACGCTACAACTGGTGCTGTGTCCTGCCATGCTGATGAGCTCTGCTCTGCGACCTGCCGAACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCAGCTTCCCACAAACTTaGTGCCTCACACACAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: AGADAEAMEECYWLASPGSFPQT*CLTHSK Trigger: TTTACTGTGTGTGAGGCACAAAGTTTGTGGGAAGCT...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTCTAGAGGATGTAGGTTaGCTTCCCAGCATCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKQVRKQELMQRPWRNVTLEDVG*LPSIHW Trigger: CCAGTGGATGCTGGGAAGCAAACCTACATCCTCTAG...AGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | CTTGGGATCACCTCCAGGGAACTCAATAGAGCCACCTaGTTCTTATGGAAGATGGCAACGATGGTTGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LGITSRELNRAT*FLWKMATMVGA Trigger: TGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTCTATTGAGTTCCCTGGAGGTGATCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | GCCACCCTATGGGTTTGCTATCAGGGATCTCTCAAATaGCGGTCTCTGGGACACTGGAGGCATAAACTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ATLWVCYQGSLK*RSLGHWRHKLH Trigger: ATGCAGTTTATGCCTCCAGTGTCCCAGAGACCGGCATTTGAGAGATCCCTGATAGCAAACCCATAGGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | ATAGAGCCACCTGCTTCTTATGGAAGATGGCAACGATaGTTGGGGCAGCTCATCCTGTCAGTCAAGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IEPPASYGRWQR*LGQLILSVKAG Trigger: TCCTGCCTTGACTGACAGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | ACCTCCAGGGAACTCAATAGAGCCACCTGCTTCTTATaGAAGATGGCAACGATGGTTGGGGCAGCTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TSRELNRATCFL*KMATMVGAAHP Trigger: AGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTCTATTGAGTTCCCTGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCCTCTTGATAGTGTTCTaGTCCCTTCATACTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AGADAEAMEECYWLASPGLLIVF*SLHTSS Trigger: TGAAGAAGTATGAAGGGACAAGAACACTATCAAGAG...GCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | GGGTTTGCTATCAGGGATCTCTCAAATGCCGGTCTCTaGGACACTGGAGGCATAAACTGCATAACCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GFAIRDLSNAGL*DTGGINCITQG Trigger: ACCTTGGGTTATGCAGTTTATGCCTCCAGTGTCCCAGAGACCGGCATTTGAGAGATCCCTGATAGCAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | GCTCAGCAGGCAAAGGTGCTTGCTGCCAATCCTGACTaGATCCACTGTAAAGAGAACCATTTCTCGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AQQAKVLAANPD*IHCKENHFSTA Trigger: AGCTGTCGAGAAATGGTTCTCTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTATAACTTCCCTTCCCCTCATCTCTCTGCTTCAGGCCCCAAATACTTACTGCAGCAGGCAAAGGTGCTaGCTGCCAATCCTGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: IITSLPLISLLQAPNTYCSRQRC*LPILTG Trigger: TCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCT...GCAGTAAGTATTTGGGGCCTGAAGCAGAGAGATGAGGGGAAGGGAAGTTATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | GGGACACAATCACTTTCCCTATGGCTAGGTAGGTATTaGGAATTCACCTGTCAGCCAGGCATGAAGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GTQSLSLWLGRY*EFTCQPGMKAQ Trigger: CTGAGCCTTCATGCCTGGCTGACAGGTGAATTCTCAATACCTACCTAGCCATAGGGAAAGTGATTGTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | AATGTTACTGGCTTGCTTCCCCTGGCTTGTTCAGCTTaGTTACAGAACCCAGAATTACCAGCCCAGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: NVTGLLPLACSA*LQNPELPAQRW Trigger: CCATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | AGGCAAAGACCCATACAGGAGGCCTGTGCTTCTCATTaGCAAATAAACCAGACTCACTGCACACTCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RQRPIQEACASH*QINQTHCTLKG Trigger: TCCCTTGAGTGTGCAGTGAGTCTGGTTTATTTGCCAATGAGAAGCACAGGCCTCCTGTATGGGTCTTTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | GGATGGAACTTAGTAGGAAGACAAGTCTCTGGGGAATaGCTCCTTAGTTCTGGGATGAGCAGCTTGGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GWNLVGRQVSGE*LLSSGMSSLVP Trigger: TGGAACCAAGCTGCTCATCCCAGAACTAAGGAGCCATTCCCCAGAGACTTGTCTTCCTACTAAGTTCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | AGAGGCCATGGAGGAATGTTACTGGCTTGCTTCCCCTaGCTTGTTCAGCTTGCTTACAGAACCCAGAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: RGHGGMLLACFP*LVQLAYRTQNY Trigger: GTAATTCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | CCATTCTATACAACATGTAGGCTCAGCAGGCAAAGGTaGTTGCTGCCAATCCTGACTGGATCCACTGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PFYTTCRLSRQR*LLPILTGSTVK Trigger: CTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAGCCTACATGTTGTATAGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAATTAATCAAGGATCTCCAGATAAACCAAAGATGTAGCCAAGAGAGATGCAGGCTCCTCCTTCCCTaGGGATCACCTCCAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: FKLIKDLQINQRCSQERCRLLLP*GSPPGN Trigger: GTTCCCTGGAGGTGATCCCAAGGGAAGGAGGAGCCT...GCATCTCTCTTGGCTACATCTTTGGTTTATCTGGAGATCCTTGATTAATTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAATGTACTGCCATTCTACACAACGTTGCCATTCTATACAACATGTAGGCTCAGCCAGACTAGGGGACTaGAGATCCACTTTCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LMYCHSTQRCHSIQHVGSARLGD*RSTFPG Trigger: GCCTGGGAAAGTGGATCTCAAGTCCCCTAGTCTGGC...TGAGCCTACATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTCAGTCCGGACTCCACATCTTCTTCCCAGAAGCATTCAGACTCCCTCTCAAACAGGAAGCTAATTTaGATCCTCAAAGAGAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QVSPDSTSSSQKHSDSLSNRKLI*ILKEKD Trigger: GTCTTTCTCTTTGAGGATCAAAATTAGCTTCCTGTT...TGAGAGGGAGTCTGAATGCTTCTGGGAAGAAGATGTGGAGTCCGGACTGACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | GGTCATGCTTTCAATATCTACATAAAACCTCACAGCTaGGCATCACCAGAAGTGTCACCAGTCAGCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GHAFNIYIKPHS*ASPEVSPVSTA Trigger: GGCTGTGCTGACTGGTGACACTTCTGGTGATGCTCAGCTGTGAGGTTTTATGTAGATATTGAAAGCATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | ACTCAAGGGACCATCCTGTCATTAACCACCTTATGCTaGTGTTACTGGCATACAACCCAAGCTGGAGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TQGTILSLTTLC*CYWHTTQAGGE Trigger: TTCACCTCCAGCTTGGGTTGTATGCCAGTAACATCAGCATAAGGTGGTTAATGACAGGATGGTCCCTTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | GTAAACTTTCCTGCATGGACAAATCATCAACAGATCTaGGCAAAGTCTGGGGGTAGAGATCCCCCAAGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: VNFPAWTNHQQI*AKSGGRDPPSS Trigger: CGAACTTGGGGGATCTCTACCCCCAGACTTTGCTCAGATCTGTTGATGATTTGTCCATGCAGGAAAGTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR CCA 72 bp | AGAATTTGGGAGGCTAAGGCAGAAAGATTACAAGTCTaGGACCAACACTTCTTGCATTTGGCTAGCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RIWEAKAERLQV*DQHFLHLASPG Trigger: TCCTGGGCTAGCCAAATGCAAGAAGTGTTGGTCCCAGACTTGTAATCTTTCTGCCTTAGCCTCCCAAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGCAGGCAAAGGTGCTTGCTGCCAATCCTGACTGGATCCACTGTAAAGAGAAACAGGAAGCTAATTTaGATCCTCAAAGAGAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSRQRCLLPILTGSTVKRNRKLI*ILKEKD Trigger: GTCTTTCTCTTTGAGGATCAAAATTAGCTTCCTGTT...TCTCTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACTAATTAAGTGGGCCTGGTTTCTCTCTGGTGAGGACTCAAGGTCAAAAGAGCAACACTTCTTGCATTaGGCTAGCCCAGGAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: ELIKWAWFLSGEDSRSKEQHFLH*ASPGKI Trigger: GATTTTTCCTGGGCTAGCCAAATGCAAGAAGTGTTG...CTCTTTTGACCTTGAGTCCTCACCAGAGAGAAACCAGGCCCACTTAATTAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACCACTTTCATTTTACAGTTTATCCCAAGCCTGACCACAGTACTAGAACATCTAGAGGATGTAGGTTaGCTTCCCAGCATCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: STTFILQFIPSLTTVLEHLEDVG*LPSIHW Trigger: CCAGTGGATGCTGGGAAGCAAACCTACATCCTCTAG...ATGTTCTAGTACTGTGGTCAGGCTTGGGATAAACTGTAAAATGAAAGTGGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | GAAAATGGTGCTGGAGAAATGGCTCAGAGAAATAGCTaGTCTTCTAGAGGATGTAGGTTTGCTTCCCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ENGAGEMAQRNS*SSRGCRFASQH Trigger: ATGCTGGGAAGCAAACCTACATCCTCTAGAAGAGCAGCTATTTCTCTGAGCCATTTCTCCAGCACCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTAGCTTCCCACAAACTTaGTGCCTCACACACAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PTQNMTTKQVGEERVYSVSFPQT*CLTHSK Trigger: TTTACTGTGTGTGAGGCACAAAGTTTGTGGGAAGCT...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | TGGATCCACTGTAAAGAGAACCATTTCTCGACAGCTTaGCCTCAATCAAGGCAAAAGCTTACACGTGCATAC | + |
|
Preference number: 3 (lower is better) Translates to: WIHCKENHFSTA*PQSRQKLTRAY Trigger: GTATGCACGTGTAAGCTTTTGCCTTGATTGAGGTCAAGCTGTCGAGAAATGGTTCTCTTTACAGTGGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | AGACAGCAGAATTTGGTAAGTCTATTCATTTTGTGCTaGCCATCCAGGCCAGAGCACATTAGGCTCTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: RQQNLVSLFILC*PSRPEHIRLLI Trigger: TATCAAGAGCCTAATGTGCTCTGGCCTGGATGGTCAGCACAAAATGAATAGACTTACCAAATTCTGCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | GAGAAATTGAGTAAGAGGAGAGCACATAGGAGAGGTTaGATGAAAAGGACAGGGAGAGAGGCCAACATAATT | + |
|
Preference number: 3 (lower is better) Translates to: EKLSKRRAHRRG*MKRTGREANII Trigger: AATTATGTTGGCCTCTCTCCCTGTCCTTTTCATTCAACCTCTCCTATGTGCTCTCCTCTTACTCAATTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | CTCTGCTTCAGGCCCCAAATACTTACTGCTTCTCTTTaGCCTCATTCATCATCTACAGAAAAGGATCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LCFRPQILTASL*PHSSSTEKDLN Trigger: ATTGAGATCCTTTTCTGTAGATGATGAATGAGGGCAAAGAGAAGCAGTAAGTATTTGGGGCCTGAAGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAATTAATCAAGGATCTCCAGATAAACCAAAGATGTAGCCAAGAGAGATGCCTGAGACAGGCAAGCTaGAAATTTCCACTGAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: FKLIKDLQINQRCSQERCLRQAS*KFPLNL Trigger: TAGGTTCAGTGGAAATTTCAAGCTTGCCTGTCTCAG...GCATCTCTCTTGGCTACATCTTTGGTTTATCTGGAGATCCTTGATTAATTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR TCA 72 bp | GATGTTACTGGCATACAACCCAAGCTGGAGGTGAAGTaGAGACAATGGTCATGCTTTCAATATCTACATAAA | + |
|
Preference number: 3 (lower is better) Translates to: DVTGIQPKLEVK*RQWSCFQYLHK Trigger: TTTATGTAGATATTGAAAGCATGACCATTGTCTTCACTTCACCTCCAGCTTGGGTTGTATGCCAGTAACATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | TCCTCAAAGAGAAAGACAGCACCAATTAATGGGAACTaGCATTTCCCCAGAGCCAATAAGCTAAATAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SSKRKTAPINGN*HFPRANKLNKT Trigger: AGTTTTATTTAGCTTATTGGCTCTGGGGAAATGGCAGTTCCCATTAATTGGTGCTGTCTTTCTCTTTGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
||
| 3UTR GCA 72 bp | AAAACCCATTTAATGTACTGCCATTCTACACAACGTTaGCATTCTATACAACATGTAGGCTCAGCAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KTHLMYCHSTQR*HSIQHVGSAGK Trigger: TTTGCCTGCTGAGCCTACATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAAATGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 72 bp | GCTTCTGTTGTTCTGAAGAGCCACGTGGGTGCTGAGTaGCCAAATGACTTGAATTTAATACCTATTTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: ASVVLKSHVGAE*PNDLNLIPILN Trigger: ATTTAAAATAGGTATTAAATTCAAGTCATTTGGTCACTCAGCACCCACGTGGCTCTTCAGAACAACAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR TCA 72 bp | AAAACTGAATTTGTTTCCTTACAACATATCAAACACTaGCACTGGACTTTCCTAAACAGCCAACTGCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: KTEFVSLQHIKH*HWTFLNSQLPD Trigger: GTCTGGCAGTTGGCTGTTTAGGAAAGTCCAGTGTCAGTGTTTGATATGTTGTAAGGAAACAAATTCAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | GAGCCACCTGCTTCTTATGGAAGATGGCAACGATGGTaGGGGCAGCTCATCCTGTCAGTCAAGGCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EPPASYGRWQRW*GQLILSVKAGA Trigger: TGCTCCTGCCTTGACTGACAGGATGAGCTGCCCCAACCATCGTTGCCATCTTCCATAAGAAGCAGGTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | GAGCTGATGCAGAGGCCATGGAGGAATGTTACTGGCTaGCTTCCCCTGGCTTGTTCAGCTTGCTTACAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ELMQRPWRNVTG*LPLACSACLQN Trigger: GTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGCCTCTGCATCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | GCCATGGAGGAATGTTACTGGCTTGCTTCCCCTGGCTaGTTCAGCTTGCTTACAGAACCCAGAATTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: AMEECYWLASPG*FSLLTEPRITS Trigger: GCTGGTAATTCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTCCTCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | GAATGTTACTGGCTTGCTTCCCCTGGCTTGTTCAGCTaGCTTACAGAACCCAGAATTACCAGCCCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: ECYWLASPGLFS*LTEPRITSPEM Trigger: CATCTCTGGGCTGGTAATTCTGGGTTCTGTAAGCAAGCTGAACAAGCCAGGGGAAGCAAGCCAGTAACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR TCA 90 bp | GTGCTGGAGAAATGGCTCAGAGAAATAGCTGCTCTTCTAGAGGATGTAGGTTTGGAAGCCAAACTGACGTaGAGGGAGCAGGTTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VLEKWLREIAALLEDVGLEAKLT*REQVVL Trigger: CAGAACAACCTGCTCCCTTCACGTCAGTTTGGCTTC...CAAACCTACATCCTCTAGAAGAGCAGCTATTTCTCTGAGCCATTTCTCCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | ACAATTAAGGTCGGTGCTGGCTCACCCCAGCCTTCCTaGATTGTTCTGAGAACGCGTGGTTATCCTATTCAA | + |
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Preference number: 4 (lower is better) Translates to: TIKVGAGSPQPS*IVLRTRGYPIQ Trigger: TTGAATAGGATAACCACGCGTTCTCAGAACAATCAAGGAAGGCTGGGGTGAGCCAGCACCGACCTTAATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR TCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTGAAGCCAAACTGACGTaGAGGGAGCAGGTTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PTQNMTTKQVGEERVYSVEAKLT*REQVVL Trigger: CAGAACAACCTGCTCCCTTCACGTCAGTTTGGCTTC...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGTACAGCTTCCCACAAACTTTGTGCCTCACACACAGTAAACACTTTCAGAGGTTGTCAGCACAATaGAGCCAAACTGACGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GGYSFPQTLCLTHSKHFQRLSAQ*SQTDVK Trigger: CTTCACGTCAGTTTGGCTTCATTGTGCTGACAACCT...CTGAAAGTGTTTACTGTGTGTGAGGCACAAAGTTTGTGGGAAGCTGTACCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGGAGAAATGGCTCAGAGAAATAGCTGCTCTTCTAGAGGATGTAGGTTTGGATGACTTTAGAACATaGCCTGATGAGGACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VLEKWLREIAALLEDVGLDDFRT*PDEDLA Trigger: CGCCAGGTCCTCATCAGGCCATGTTCTAAAGTCATC...CAAACCTACATCCTCTAGAAGAGCAGCTATTTCTCTGAGCCATTTCTCCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR CCA 90 bp | GAACTAATTAAGTGGGCCTGGTTTCTCTCTGGTGAGGACTCAAGGTCAAAAGAGGATGACTTTAGAACATaGCCTGATGAGGACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: ELIKWAWFLSGEDSRSKEDDFRT*PDEDLA Trigger: CGCCAGGTCCTCATCAGGCCATGTTCTAAAGTCATC...CTCTTTTGACCTTGAGTCCTCACCAGAGAGAAACCAGGCCCACTTAATTAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR TCA 90 bp | CCTACACAAAACATGACCACGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGTTACAATGAAGCCAAACTaGCGTGAAGGGAGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PTQNMTTKQVGEERVYSVTMKPN*REGSRL Trigger: CAACCTGCTCCCTTCACGTCAGTTTGGCTTCATTGT...AACTGAATAAACCCTTTCCTCCCCAACTTGCTTCGTGGTCATGTTTTGTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | TTCTATACAACATGTAGGCTCAGCAGGCAAAGGTGCTaGCTGCCAATCCTGACTGGATCCACTGTAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FYTTCRLSRQRC*LPILTGSTVKR Trigger: TCTCTTTACAGTGGATCCAGTCAGGATTGGCAGCAAGCACCTTTGCCTGCTGAGCCTACATGTTGTATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | AATCTCATGGAGGCATTTCCTCAACTGAACTCCAGCTaGTGTCAAGTTGACACAAAACCAGCCAGCACACTT | + |
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Preference number: 4 (lower is better) Translates to: NLMEAFPQLNSS*CQVDTKPASTL Trigger: AAGTGTGCTGGCTGGTTTTGTGTCAACTTGACACAAGCTGGAGTTCAGTTGAGGAAATGCCTCCATGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | TCTCTGCTTCAGGCCCCAAATACTTACTGCTTCTCTTaGCCCTCATTCATCATCTACAGAAAAGGATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SLLQAPNTYCFS*PSFIIYRKGSQ Trigger: TTGAGATCCTTTTCTGTAGATGATGAATGAGGGCAAAGAGAAGCAGTAAGTATTTGGGGCCTGAAGCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR TCA 90 bp | TTCAAATTAATCAAGGATCTCCAGATAAACCAAAGATGTAGCCAAGAGAGATGCAGGTTGTCAGCACAATaGAGCCAAACTGACGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FKLIKDLQINQRCSQERCRLSAQ*SQTDVK Trigger: CTTCACGTCAGTTTGGCTTCATTGTGCTGACAACCT...GCATCTCTCTTGGCTACATCTTTGGTTTATCTGGAGATCCTTGATTAATTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| 3UTR CAA 72 bp | AAAAACCCATTTAATGTACTGCCATTCTACACAACGTaGCCATTCTATACAACATGTAGGCTCAGCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: KNPFNVLPFYTT*PFYTTCRLSRQ Trigger: TTGCCTGCTGAGCCTACATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAAATGGGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR CAA 90 bp | GTGCTGGAGAAATGGCTCAGAGAAATAGCTGCTCTTCTAGAGGATGTAGGTTTGCTTATAACGCCACACTaGTTCAACCTTCCTGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: VLEKWLREIAALLEDVGLLITPH*FNLPVR Trigger: CCTCACAGGAAGGTTGAACAAGTGTGGCGTTATAAG...CAAACCTACATCCTCTAGAAGAGCAGCTATTTCTCTGAGCCATTTCTCCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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| CDS-3UTR CAA 90 bp | TTAATGTACTGCCATTCTACACAACGTTGCCATTCTATACAACATGTAGGCTCACTTATAACGCCACACTaGTTCAACCTTCCTGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LMYCHSTQRCHSIQHVGSLITPH*FNLPVR Trigger: CCTCACAGGAAGGTTGAACAAGTGTGGCGTTATAAG...TGAGCCTACATGTTGTATAGAATGGCAACGTTGTGTAGAATGGCAGTACATTAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131374.8 ENSMUST00000172457.8 |
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