Pregenerated sensors for RPS11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003429Ensembl transcript IDs: ENSMUST00000003521.10
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TGTTCTGTACGTTGGAAAATAACTTTATTTGTTCTAGGGCATTGGCCAGAGTCCCGATCTGTACATCCCTaGAACAGGGGGACAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVRWKITLFVLGHWPESRSVHP*NRGTGA Trigger: TGCACCTGTCCCCCTGTTTCAGGGATGTACAGATCG...GGACTCTGGCCAATGCCCTAGAACAAATAAAGTTATTTTCCAACGTACAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003521.10 |
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| CDS-3UTR TCA 90 bp | TTCTGTACGTTGGAAAATAACTTTATTTGTTCTAGGGCATTGGCCAGAGTCCCCTGCACTCTCCAACTGTaGCAATGTCTCCGATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FCTLENNFICSRALARVPCTLQL*QCLRSV Trigger: TACAGATCGGAGACATTGTCACAGTTGGAGAGTGCA...GGGGACTCTGGCCAATGCCCTAGAACAAATAAAGTTATTTTCCAACGTACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003521.10 |
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| CDS-3UTR CAA 90 bp | TGTTCTGTACGTTGGAAAATAACTTTATTTGTTCTAGGGCATTGGCCAGAGTCCGCCTCTTTAGGCGTCTaGAAGCCTAGACCGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: CSVRWKITLFVLGHWPESASLGV*KPRPIF Trigger: GAATATCGGTCTAGGCTTCAAGACGCCTAAAGAGGC...GGACTCTGGCCAATGCCCTAGAACAAATAAAGTTATTTTCCAACGTACAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003521.10 |
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