Pregenerated sensors for RPRD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028106Ensembl transcript IDs: ENSMUST00000090791.8, ENSMUST00000197449.2, ENSMUST00000200164.5
Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGGTGCAGCACACCTAGCTGGAGGTCCTCAGCGTGTGCCCCGGTaGAACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: TGAAHLAGGPQRVPR*NTLPENLVCSVCFP Trigger: TGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTTGCACCGGGGCACACGCTGAGGACCTCCAGCTAGGTGTGCTGCACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR GCA 90 bp | ACATTCCTTGGTTTTCAGAGCGGCAATCTGTTTCTGCACCCACGCTaGTCAGCGAATGCAGCAGGACGACAGGATCAGAGGCACTACCAA | + |
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Preference number: 1 (lower is better) Translates to: TFLGFQSGNLFLHPR*SANAAGRQDQRHYQ Trigger: TTGGTAGTGCCTCTGATCCTGTCGTCCTGCTGCATTCGCTGAGCAGCGTGGGTGCAGAAACAGATTGCCGCTCTGAAAACCAAGGAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR GCA 90 bp | CCCACACTGCCCATTGTTTCCCCTCTGCAAACACTCTCGGTCCTCTaGAGAGTAGAAAATACAAAGAAGGGAGCCAAGCTGGTTACAGAA | + |
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Preference number: 1 (lower is better) Translates to: PTLPIVSPLQTLSVL*RVENTKKGAKLVTE Trigger: TTCTGTAACCAGCTTGGCTCCCTTCTTTGTATTTTCTACTCTGCAGAGGACCGAGAGTGTTTGCAGAGGGGAAACAATGGGCAGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR GCA 90 bp | CCTCAGCGTGTGCCCCGGTGCAACACACTACCAGAAAACCTAGTGTaGAGTGTCTGCTTCCCAGATACAAAGACAGAAACATTCCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: PQRVPRCNTLPENLV*SVCFPDTKTETFQD Trigger: ATCTTGGAATGTTTCTGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTTGCACCGGGGCACACGCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR GCA 90 bp | TATTTTCATGCACATTCCTTGGTTTTCAGAGCGGCAATCTGTTTCTaGACCCACGCTGCTCAGCGAATGCAGCAGGACGACAGGATCAGA | + |
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Preference number: 1 (lower is better) Translates to: YFHAHSLVFRAAICF*THAAQRMQQDDRIR Trigger: TCTGATCCTGTCGTCCTGCTGCATTCGCTGAGCAGCGTGGGTGCAGAAACAGATTGCCGCTCTGAAAACCAAGGAATGTGCATGAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR GCA 90 bp | CAGGGTGCAGATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTaGGTGTGCAGTACAGTCCTCCTGTCACTATTATCATTGCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: QGADEIQCFCLSFCT*VCSTVLLSLLSLLV Trigger: CACTAGCAATGATAATAGTGACAGGAGGACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATCTGCACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR TCA 90 bp | GCCTTCCTCTGTCACTATCTAATTTTGGGAGATTACGTCAATCACTaGATCTGGAACTTCAGGTTTCTGCTAGACTGGCTGCTTCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: AFLCHYLILGDYVNH*IWNFRFLLDWLLLP Trigger: GGGGAGAAGCAGCCAGTCTAGCAGAAACCTGAAGTTCCAGATTCAGTGATTGACGTAATCTCCCAAAATTAGATAGTGACAGAGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR CCA 90 bp | ACTCTCAGAAAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTaGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: TLRKSFRVLCDTAPL*YFCVVLEYSWNSLC Trigger: ACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTTTCTGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR GCA 90 bp | CTACTGACCATCAGCAAGGCCAAGACCCAAATAACACCCCAACATTaGACGTTATTACCTGTACTGACCGAAGTTTTATTTCGATGTAAG | + |
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Preference number: 1 (lower is better) Translates to: LLTISKAKTQITPQH*TLLPVLTEVLFRCK Trigger: CTTACATCGAAATAAAACTTCGGTCAGTACAGGTAATAACGTGCAATGTTGGGGTGTTATTTGGGTCTTGGCCTTGCTGATGGTCAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR GCA 90 bp | AGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATaGAGAAACACAAACAAAGTTTTTAATGCAGGGAAGAAAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: RNIPRSTIVFPLGIR*RNTNKVFNAGKKAL Trigger: GAGAGCTTTCTTCCCTGCATTAAAAACTTTGTTTGTGTTTCTGCATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCGACAGGCCCCACACTaGCCATTGTTTCCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GLKRALLLPLPPSAGLVCRQAPH*PLFPLC Trigger: GCAGAGGGGAAACAATGGGCAGTGTGGGGCCTGTCG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTAGAAGGGAGCCAAGCTaGTTACAGAAGCTGCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: GLKRALLLPLPPSAGLVCRREPS*LQKLLS Trigger: GCTAAGCAGCTTCTGTAACCAGCTTGGCTCCCTTCT...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTACCATGTATGCTTTCTaGATTTGGAAGGAGGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GLKRALLLPLPPSAGLVCTMYAF*IWKEGP Trigger: AGGGCCCTCCTTCCAAATTCAGAAAGCATACATGGT...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR TCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCACCATGTATGCTTTCTaGATTTGGAAGGAGGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VLLYSPGWPQTCPSLAPATMYAF*IWKEGP Trigger: AGGGCCCTCCTTCCAAATTCAGAAAGCATACATGGT...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCGCTGGTTACAGAAGCTaGTTAGCTGGAGAGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAAGYRS*LAGEGR Trigger: CCTTCCCTCTCCAGCTAAGCAGCTTCTGTAACCAGC...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAGCCCCTGCCTCCCAGTaGTGGACTTGTGTGTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVAPASQ*WTCVCY Trigger: GTAGCACACACAAGTCCAGCACTGGGAGGCAGGGGC...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCATTGTTTCCCCTCTaGAAACACTCTCGGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAPLFPL*KHSRSS Trigger: AGAGGACCGAGAGTGTTTGCAGAGGGGAAACAATGG...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACCGACAGGCCCCACACTaGCCATTGTTTCCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AAAMLLKTVILLQHFRNHRQAPH*PLFPLC Trigger: GCAGAGGGGAAACAATGGGCAGTGTGGGGCCTGTCG...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAACAGCTCCCGGGCTCTaGTGGACAGCCTTTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVTAPGL*WTAFLQ Trigger: CTGAAGAAAGGCTGTCCAGCAGAGCCCGGGAGCTGT...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCCAGGCTATCCCTGAATaGCTCATATCCTGCCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: AGRQDQRHYQCRAPSLHVQAIPE*LISCLF Trigger: AAAGAGGCAGGATATGAGGCATTCAGGGATAGCCTG...GACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCTTGGCTTCCTCAGGGCTCAGGTTACAGGTGGTAGCACATCTAGTTCACGAGTCACATCTCTCCTaGCACCTGTACATGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: SCLASSGLRLQVVAHLVHESHLS*HLYMDP Trigger: AGGATCCATGTACAGGTGGCAGGAGAGATGTGACTC...GTGAACTAGATGTGCTACCACCTGTAACCTGAGCCCTGAGGAAGCCAAGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCACCTGCCTCCCAGTGCTaGACTTGTGTGTGCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAPASQC*TCVCYH Trigger: GTGGTAGCACACACAAGTCCAGCACTGGGAGGCAGG...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR CCA 90 bp | CAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCTGAAAGACGGAAATCAGTaGCTCAGCATCATCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: QQWSYRHTQLSLVVVWVLKDGNQ*LSIISG Trigger: GCCACTGATGATGCTGAGCCACTGATTTCCGTCTTT...CAGCACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATGGCTGGCCTCAAACGTaGCCTTCTCTTGCCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VRESRRQGLRIDTENHQNGWPQT*PSLAPA Trigger: GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCC...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAAGCTCAACACACTGGTaGAGCACACCTAGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVSSTHW*STPSWR Trigger: CCTCCAGCTAGGTGTGCTGCACCAGTGTGTTGAGCT...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGGAATGCCTCATATCCTaGCTCTTTTCCCAAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SQQWSYRHTQLSLVVVWVECLIS*LFSQVL Trigger: CAGCACTTGGGAAAAGAGGCAGGATATGAGGCATTC...CACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCAAAATACAAACAAATTaGAAAGGCCCTAAGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAKIQTN*KGPKCG Trigger: TCCACACTTAGGGCCTTTCCAATTTGTTTGTATTTT...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACGCTGGTTACAGAAGCTaGTTAGCTGGAGAGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AAAMLLKTVILLQHFRNHAGYRS*LAGEGR Trigger: CCTTCCCTCTCCAGCTAAGCAGCTTCTGTAACCAGC...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCCCTTCTCTTGCCCCTaGCTCCCAGTGCTGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFPFSCP*LPVLDL Trigger: CAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | ACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCTATGGAGGTCTCATCAGGTTTaGATGGCAAGGACTTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: TTGSEALPMQSTFTACLWRSHQV*MARTSV Trigger: TACTGAAGTCCTTGCCATGCAAACCTGATGAGACCT...CCATAGACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR-3UTR CCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGGTGAGGGTGAGAGGTaGGTACTGAAAGCACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: HEVMISCIFVRRPIGQKGGEGER*VLKAPR Trigger: TCTTGGTGCTTTCAGTACCCACCTCTCACCCTCACC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR CAA 90 bp | CTGTGCAGTAAGAAACCTGCACCTACTCACATGGTGGAGACCAGCTaGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LCSKKPAPTHMVETS*LYHTSHKQGFWVQR Trigger: TCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCTGGTCTCCACCATGTGAGTAGGTGCAGGTTTCTTACTGCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAACAGCAAGAACAGGATaGATACAGGACTGTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: AHDTFLGVKPSSDDTRKATARTG*IQDCDG Trigger: CCCATCACAGTCCTGTATTCATCCTGTTCTTGCTGT...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTACAGCAAGAACAGGATaGATACAGGACTGTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: RVAGRELPSKLNQLSENPTARTG*IQDCDG Trigger: CCCATCACAGTCCTGTATTCATCCTGTTCTTGCTGT...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAACTTCAGGGTCCTATGTaGCACAGCACCACTGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: SLLYHTSHKQGFWVQRGELQGPM*HSTTVV Trigger: TACCACAGTGGTGCTGTGTCACATAGGACCCTGAAG...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGGGTGAGGGTGAGAGGTaGGTACTGAAAGCACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMGEGER*VLKAPR Trigger: TCTTGGTGCTTTCAGTACCCACCTCTCACCCTCACC...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCAACAAAAACCCAAACTaGTACTTCCAATGCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: DKVLLYSPGWPQTCPSLANKNPN*YFQCSL Trigger: TAGAGAGCATTGGAAGTAGCAGTTTGGGTTTTTGTT...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAAGAAGGGAGCCAAGCTaGTTACAGAAGCTGCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: SLLYHTSHKQGFWVQRGERREPS*LQKLLS Trigger: GCTAAGCAGCTTCTGTAACCAGCTTGGCTCCCTTCT...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGCCTTCAATTCTTACTCTTCCTGCTTGGCTTCCTCAGGGCTCAGGTTAAAAACCCCACTTTGCTaGTTCAATGAAACAAAGACG | + |
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Preference number: 2 (lower is better) Translates to: RLAFNSYSSCLASSGLRLKTPLC*FNETKT Trigger: CGTCTTTGTTTCATTGAACCAGCAAAGTGGGGTTTT...TAACCTGAGCCCTGAGGAAGCCAAGCAGGAAGAGTAAGAATTGAAGGCCAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTTCACTCTGCTTCATATaGCTCATGTCCTTGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: RVAGRELPSKLNQLSENPSLCFI*LMSLLR Trigger: TCTTAGCAAGGACATGAGTCATATGAAGCAGAGTGA...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTCCCTTCTCTTGCCCCTaGCTCCCAGTGCTGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: GLSLALHIVIISHFNLEIPFSCP*LPVLDL Trigger: CAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGG...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCACTGAAAGCACCAAGATaGTATTTGCTGAGGGATAAC | + |
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Preference number: 2 (lower is better) Translates to: AHDTFLGVKPSSDDTRKALKAPR*YLLRDN Trigger: GTTATCCCTCAGCAAATAGCATCTTGGTGCTTTCAG...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGTGGCAAGGGTTTTCCTCTTACACAGCCTTTAAGGTGACATTATACAAAAGGTTTCTGCTAGACTaGCTGCTTCTCCCCAGTATC | + |
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Preference number: 2 (lower is better) Translates to: WEWQGFSSYTAFKVTLYKRFLLD*LLLPSI Trigger: GATACTGGGGAGAAGCAGCCAGTCTAGCAGAAACCT...TTTGTATAATGTCACCTTAAAGGCTGTGTAAGAGGAAAACCCTTGCCACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCGGCCGCTATGCTTTTaGAGACAGTTATCCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFRPLCF*RQLSCF Trigger: GAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR TCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTACTGAAACAAACACACTaGAGATCTTGTGGCAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVLKQTH*RSCGKN Trigger: GTTTTTGCCACAAGATCTTCAGTGTGTTTGTTTCAG...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAACTAGTGTGCAGTGTCTaGTTCCCAGATACAAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: SLLYHTSHKQGFWVQRGELVCSV*FPDTKT Trigger: TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAG...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTTTGAGAGGAAAGAACTaGCTCAAAACGGATGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: RVAGRELPSKLNQLSENPLRGKN*LKTDVN Trigger: ATTCACATCCGTTTTGAGCCAGTTCTTTCCTCTCAA...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTCCCAGCCAAATAATGTaGCTTTGGTTATGTTTACTT | + |
|
Preference number: 2 (lower is better) Translates to: RVAGRELPSKLNQLSENPPSQIM*LWLCLL Trigger: AAGTAAACATAACCAAAGCCACATTATTTGGCTGGG...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACCCAGCCAAATAATGTaGCTTTGGTTATGTTTACTT | + |
|
Preference number: 2 (lower is better) Translates to: NTLPENLVCSVCFPDTKTPSQIM*LWLCLL Trigger: AAGTAAACATAACCAAAGCCACATTATTTGGCTGGG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR TCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCAGAAACCACTTTCCTaGTACTTCCCTGTTTTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFQKPLS*YFPVFL Trigger: TAAGAAAACAGGGAAGTATCAGGAAAGTGGTTTCTG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAAAAATACAAACAAATTaGAAAGGCCCTAAGTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEKIQTN*KGPKCG Trigger: TCCACACTTAGGGCCTTTCCAATTTGTTTGTATTTT...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR GCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTAACAAAAACCCAAACTaGTACTTCCAATGCTCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFNKNPN*YFQCSL Trigger: TAGAGAGCATTGGAAGTAGCAGTTTGGGTTTTTGTT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTTACACTTCAAAGCACAGTAAAAAGGTAAACGCAGACGCAAGAAAAACATTTGCAGATGAGATACAATaGTTCTGTCTGTCCTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CYTSKHSKKVNADARKTFADEIQ*FCLSFC Trigger: GCAGAAGGACAGACAGAAGCATTGTATCTCATCTGC...AAATGTTTTTCTTGCGTCTGCGTTTACCTTTTTACTGTGCTTTGAAGTGTAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTGTGTGGAGAGAGGACTaGATAATAGCAAACTGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: GLSLALHIVIISHFNLEIVWRED*IIANCY Trigger: GTAACAGTTTGCTATTATCCAGTCCTCTCTCCACAC...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTTACACTTCAAAGCACAGTAAAAAGGTAAACGCAGACGCAAGAAAAACATTTACTTTGCTGGTTCAATaGAACAAAGACGGAAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: CYTSKHSKKVNADARKTFTLLVQ*NKDGNQ Trigger: CTGATTTCCGTCTTTGTTTCATTGAACCAGCAAAGT...AAATGTTTTTCTTGCGTCTGCGTTTACCTTTTTACTGTGCTTTGAAGTGTAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR GCA 72 bp | CCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTaGCTCCCAGTGCTGGACTTGTGTGTGCTACCACAT | + |
|
Preference number: 3 (lower is better) Translates to: PGLASNVPFSCP*LPVLDLCVLPH Trigger: ATGTGGTAGCACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | AAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTaGCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: KVLLYSPGWPQT*PSLAPASQCWT Trigger: AGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | GCACATTCCTTGGTTTTCAGAGCGGCAATCTGTTTCTaGACCCACGCTGCTCAGCGAATGCAGCAGGACGAC | + |
|
Preference number: 3 (lower is better) Translates to: AHSLVFRAAICF*THAAQRMQQDD Trigger: GTCGTCCTGCTGCATTCGCTGAGCAGCGTGGGTGCAGAAACAGATTGCCGCTCTGAAAACCAAGGAATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTGTATGCTTTCTGAATTaGGAAGGAGGGCCCTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: GLKRALLLPLPPSAGLVCVCFLN*EGGPFI Trigger: AATGAAGGGCCCTCCTTCCAAATTCAGAAAGCATAC...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | ACTTGCTGGAATTCCTTCAAAAGCTCAACACACTGGTaGAGCACACCTAGCTGGAGGTCCTCAGCGTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TCWNSFKSSTHW*STPSWRSSACA Trigger: GGCACACGCTGAGGACCTCCAGCTAGGTGTGCTGCACCAGTGTGTTGAGCTTTTGAAGGAATTCCAGCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | AATGCAGCAGGACGACAGGATCAGAGGCACTACCAATaGAGAGCACCTTCACTGCATGTCTATGGGAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NAAGRQDQRHYQ*RAPSLHVYGSG Trigger: GCCACTCCCATAGACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGCTGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR CCA 72 bp | CTGCTAGACTGGCTGCTTCTCCCCAGTATCTACCAGTaGGTACTCACTCTCAACAGTGGAGCTACAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LLDWLLLPSIYQ*VLTLNSGATGT Trigger: TGTGCCTGTAGCTCCACTGTTGAGAGTGAGTACCCACTGGTAGATACTGGGGAGAAGCAGCCAGTCTAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR TCA 72 bp | ACATGCCCCCAAATACTACCCTGGGCAGGGTGCAGATaGGATACAATGCTTCTGTCTGTCCTTCTGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: TCPQILPWAGCR*DTMLLSVLLHL Trigger: CAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATCTGCACCCTGCCCAGGGTAGTATTTGGGGGCATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR GCA 72 bp | AAATACAAAGAAGGGAGCCAAGCTGGTTACAGAAGCTaGTTAGCTGGAGAGGGAAGGAGACAGGGCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KYKEGSQAGYRS*LAGEGRRQGSS Trigger: GGAGGAGCCCTGTCTCCTTCCCTCTCCAGCTAAGCAGCTTCTGTAACCAGCTTGGCTCCCTTCTTTGTATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CCA 72 bp | CCCCAGTATCTACCAGTGGGTACTCACTCTCAACAGTaGAGCTACAGGCACACACAGCTAAGCCTGGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PQYLPVGTHSQQ*SYRHTQLSLVV Trigger: AACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTGAGAGTGAGTACCCACTGGTAGATACTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCTGCCATCTCCATCATTTTaGTCCAGAAAGGGCCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QQWSYRHTQLSLVVVWVLPSPSF*SRKGLM Trigger: CATGAGGCCCTTTCTGGACAAAAATGATGGAGATGG...CAGCACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR GCA 72 bp | AAATACTACCCTGGGCAGGGTGCAGATGAGATACAATaGTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KYYPGQGADEIQ*FCLSFCTCVCS Trigger: ACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATCTGCACCCTGCCCAGGGTAGTATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGCCCCACACTGCCCATaGTTTCCCCTCTGCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: NTLPENLVCSVCFPDTKTAPHCP*FPLCKH Trigger: GTGTTTGCAGAGGGGAAACAATGGGCAGTGTGGGGC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | CCCATTGTTTCCCCTCTGCAAACACTCTCGGTCCTCTaGAGAGTAGAAAATACAAAGAAGGGAGCCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PIVSPLQTLSVL*RVENTKKGAKL Trigger: CAGCTTGGCTCCCTTCTTTGTATTTTCTACTCTGCAGAGGACCGAGAGTGTTTGCAGAGGGGAAACAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | GGTGAGGGTGAGAGGTGGGTACTGAAAGCACCAAGATaGTATTTGCTGAGGGATAACATGGATTCCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GEGERWVLKAPR*YLLRDNMDSSG Trigger: TCCTGAGGAATCCATGTTATCCCTCAGCAAATAGCATCTTGGTGCTTTCAGTACCCACCTCTCACCCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | CATGTAGCCCAGGCTATCCCTGAATGCCTCATATCCTaGCTCTTTTCCCAAGTGCTGAGATTTCAGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HVAQAIPECLIS*LFSQVLRFQVC Trigger: ACACACCTGAAATCTCAGCACTTGGGAAAAGAGGCAGGATATGAGGCATTCAGGGATAGCCTGGGCTACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR CCA 72 bp | GGAGTCACATCTCTCCTGCCACCTGTACATGGATCCTaGAGATTCAATGTAGGTCTCATCAGGTTTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GVTSLLPPVHGS*RFNVGLIRFAW Trigger: CCATGCAAACCTGATGAGACCTACATTGAATCTCCAGGATCCATGTACAGGTGGCAGGAGAGATGTGACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR GCA 72 bp | AGAAACCTGCACCTACTCACATGGTGGAGACCAGCTTaGTGTACCACACTTCTCATAAACAAGGTTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RNLHLLTWWRPA*CTTLLINKVSG Trigger: CCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCTGGTCTCCACCATGTGAGTAGGTGCAGGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGTATGCTTTCTGAATTaGGAAGGAGGGCCCTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAVCFLN*EGGPFI Trigger: AATGAAGGGCCCTCCTTCCAAATTCAGAAAGCATAC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGCACCAAGATGCTATTaGCTGAGGGATAACATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RVAGRELPSKLNQLSENPAPRCY*LRDNMD Trigger: ATCCATGTTATCCCTCAGCAAATAGCATCTTGGTGC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTaGGTGTGCAGTACAGTCCTCCTGTCACTATTATCA | + |
|
Preference number: 3 (lower is better) Translates to: DEIQCFCLSFCT*VCSTVLLSLLS Trigger: TGATAATAGTGACAGGAGGACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR CCA 72 bp | GGCCTAACTCCATCAGCAGGTAATATTAGGACTGAGTaGATACTGTGCAGTAAGAAACCTGCACCTACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLTPSAGNIRTE*ILCSKKPAPTH Trigger: GTGAGTAGGTGCAGGTTTCTTACTGCACAGTATCCACTCAGTCCTAATATTACCTGCTGATGGAGTTAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | ATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTaGAGTACAGTCCTCCTGTCACTATTATCATTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: IQCFCLSFCTCV*STVLLSLLSLL Trigger: TAGCAATGATAATAGTGACAGGAGGACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR CCA 72 bp | AGACCTATAGGGCAGAAAGGCTTGAGAGGAAAGAACTaGCTCAAAACGGATGTGAATTCTGAGGATTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RPIGQKGLRGKN*LKTDVNSEDSC Trigger: GCAAGAATCCTCAGAATTCACATCCGTTTTGAGCCAGTTCTTTCCTCTCAAGCCTTTCTGCCCTATAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGCACCAAGATGCTATTaGCTGAGGGATAACATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NTLPENLVCSVCFPDTKTAPRCY*LRDNMD Trigger: ATCCATGTTATCCCTCAGCAAATAGCATCTTGGTGC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | GTTATACCCAACCCAAAACACGAGGTCATGATATCATaGATTTTTGTGAGGAGACCTATAGGGCAGAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VIPNPKHEVMIS*IFVRRPIGQKG Trigger: GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTGTTTTGGGTTGGGTATAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR TCA 72 bp | AAGGACCTTAGTGACAACTACTCACTCTGCTTCATATaGCTCATGTCCTTGCTAAGACACACTATGTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KDLSDNYSLCFI*LMSLLRHTMLC Trigger: GCACAACATAGTGTGTCTTAGCAAGGACATGAGTCATATGAAGCAGAGTGAGTAGTTGTCACTAAGGTCCTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR TCA 72 bp | GTCCTCCTGTCACTATTATCATTGCTAGTGTGTGGATaGTGTGGGTTAGAGGAGAATTTTGAGGAGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLSLLSLLVCG*CGLEENFEESH Trigger: ATGTGACTCCTCAAAATTCTCCTCTAACCCACATCATCCACACACTAGCAATGATAATAGTGACAGGAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR GCA 72 bp | CCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATaGAGAAACACAAACAAAGTTTTTAATGCAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PRSTIVFPLGIR*RNTNKVFNAGK Trigger: CTTCCCTGCATTAAAAACTTTGTTTGTGTTTCTGCATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | ACATTGTGTGTACCTGGAGACCAAAATGACACCGTGTaGCTTCCTCTGTCACTATCTAATTTTGGGAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: TLCVPGDQNDTV*LPLSLSNFGRL Trigger: TAATCTCCCAAAATTAGATAGTGACAGAGGAAGGCACACGGTGTCATTTTGGTCTCCAGGTACACACAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR CCA 72 bp | ACAAACAAGCACTATGTTATTTTCATGCACATTCCTTaGTTTTCAGAGCGGCAATCTGTTTCTGCACCCACG | + |
|
Preference number: 3 (lower is better) Translates to: TNKHYVIFMHIP*FSERQSVSAPT Trigger: CGTGGGTGCAGAAACAGATTGCCGCTCTGAAAACCAAGGAATGTGCATGAAAATAACATAGTGCTTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR-3UTR CAA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCCCAAATAATGTGGCTTaGGTTATGTTTACTTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: HEVMISCIFVRRPIGQKGPNNVA*VMFTYA Trigger: GGCATAAGTAAACATAACCAAAGCCACATTATTTGG...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACATGTTTCCCTTTTCCTaGTTTACAAAAGACAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: AAAMLLKTVILLQHFRNHMFPFS*FTKDSW Trigger: CCAACTGTCTTTTGTAAACAAGGAAAAGGGAAACAT...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR TCA 72 bp | TGTCACTATCTAATTTTGGGAGATTACGTCAATCACTaGATCTGGAACTTCAGGTTTCTGCTAGACTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CHYLILGDYVNH*IWNFRFLLDWL Trigger: CAGCCAGTCTAGCAGAAACCTGAAGTTCCAGATTCAGTGATTGACGTAATCTCCCAAAATTAGATAGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR GCA 72 bp | ATCAGCAAGGCCAAGACCCAAATAACACCCCAACATTaGACGTTATTACCTGTACTGACCGAAGTTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: ISKAKTQITPQH*TLLPVLTEVLF Trigger: AAATAAAACTTCGGTCAGTACAGGTAATAACGTGCAATGTTGGGGTGTTATTTGGGTCTTGGCCTTGCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CCA 72 bp | GCCATTAAAGTTGATGCACATGACTTTTCTTGTGTGTaGTACATGCACAGTTATACACTCCCACATTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AIKVDAHDFSCV*YMHSYTLPHCV Trigger: CACACAATGTGGGAGTGTATAACTGTGCATGTACCACACACAAGAAAAGTCATGTGCATCAACTTTAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| 3UTR-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACCAAATAATGTGGCTTaGGTTATGTTTACTTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: NTLPENLVCSVCFPDTKTPNNVA*VMFTYA Trigger: GGCATAAGTAAACATAACCAAAGCCACATTATTTGG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGATGTTTCCCTTTTCCTaGTTTACAAAAGACAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMMFPFS*FTKDSW Trigger: CCAACTGTCTTTTGTAAACAAGGAAAAGGGAAACAT...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR GCA 72 bp | AGAGAGGACTGGATAATAGCAAACTGTTACCATGTATaGTTTCTGAATTTGGAAGGAGGGCCCTTCATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: REDWIIANCYHV*FLNLEGGPFIK Trigger: TTTAATGAAGGGCCCTCCTTCCAAATTCAGAAAGCATACATGGTAACAGTTTGCTATTATCCAGTCCTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CCA 72 bp | CTTTTCCTTGTTTACAAAAGACAGTTGGTCACTGAGTaGTCTGTCCCTAGCTTTACATATTGTGATCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFLVYKRQLVTE*SVPSFTYCDHF Trigger: GAAATGATCACAATATGTAAAGCTAGGGACAGACCACTCAGTGACCAACTGTCTTTTGTAAACAAGGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR TCA 72 bp | AGTGGCAAGGGTTTTCCTCTTACACAGCCTTTAAGGTaGCATTATACAAATAAATTCCTTTACACTGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: SGKGFPLTQPLR*HYTNKFLYTVT Trigger: TGTAACAGTGTAAAGGAATTTATTTGTATAATGTCACCTTAAAGGCTGTGTAAGAGGAAAACCCTTGCCACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTACCTCCTCCAAGGGCTaGGCCCAGGTGCTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCTSSKG*AQVLQR Trigger: CCTCTGGAGCACCTGGGCCCAGCCCTTGGAGGAGGT...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTGTGGGTGGGTGGCCTaGTGGAGCGGCAAGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPACGWVA*WSGKGT Trigger: AGTACCCTTGCCGCTCCAGCAGGCCACCCACCCACA...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCGGTGGTGGGCCAGCGTaGGCCAGAGATGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAGGGPA*ARDASF Trigger: AAAGGAGGCATCTCTGGCCCACGCTGGCCCACCACC...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCTGGTGACACTCTCCTaGAACTGGGGTGCCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCLVTLS*NWGARS Trigger: GGAACGGGCACCCCAGTTTCAGGAGAGTGTCACCAG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCGGTCCCTGGGTCCTGTaGGCACCCCAAAATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAGPWVL*APQNAQ Trigger: CTGAGCATTTTGGGGTGCTCACAGGACCCAGGGACC...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGCCTTCAATTCTTACTCTTCCTGCTTGGCTTCCTCAGGGCTCAGGTTAAGGAGGCCTTACTGCTaGCTCCGCCGCCGCCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLAFNSYSSCLASSGLRLRRPYC*LRRRRP Trigger: CGGCCGGCGGCGGCGGAGGCAGCAGTAAGGCCTCCT...TAACCTGAGCCCTGAGGAAGCCAAGCAGGAAGAGTAAGAATTGAAGGCCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR GCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCCACTGCTGCTGGTGTTaGCTCCCCCACCTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAHCCWC*LPHLLQ Trigger: TTGGAGGAGGTGGGGGAGGCAACACCAGCAGCAGTG...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTAGACTCCAGGGCCCCTaGGGACGAGGCCGACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTTGSEALPMQSTFTACRLQGP*GRGRRG Trigger: TCCTCGTCGGCCTCGTCCGCAGGGGCCCTGGAGTCT...ACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCTCCTGAAACTGGGGTaGCCGTTCCTTGTACGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCLLKLG*PFLVRR Trigger: ACGCCGTACAAGGAACGGGCACCCCAGTTTCAGGAG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCAAACCAACCCACTCTTaGAACCTCGCGCCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAKPTHS*NLAPMS Trigger: GGACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTT...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTCAGCCATGGTCCCTTaGAGGAGGGAACTATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCSAMVP*RRELWS Trigger: GGACCATAGTTCCCTCCTTCAAGGGACCATGGCTGA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTAGGAGGCCTTACTGCTaGCTCCGCCGCCGCCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPRRPYC*LRRRRP Trigger: CGGCCGGCGGCGGCGGAGGCAGCAGTAAGGCCTCCT...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTGGGCAGATGAGTGGGTaGCTCTCGAGAGAAGATACC | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCGQMSG*LSREDT Trigger: GGTATCTTCTCTCGAGAGGCACCCACTCATCTGCCC...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCAGAGGGTTGTGAGATaGTGTTGTGGCAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCQRVVR*CCGRCR Trigger: CCTGCACCTGCCACAACACCATCTCACAACCCTCTG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTCCGCTGTGCTCTCCTaGAGGAGGTGGTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLASAVLS*RRWWAS Trigger: GCTGGCCCACCACCTCCTCCAGGAGAGCACAGCGGA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCTGACTCTCCATGGCCGGTaGCTGGGGTTCTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QQWSYRHTQLSLVVVWVLTLHGR*LGFFTS Trigger: GGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGT...CAGCACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTGGAGAGGTGGACTCTaGTTCTGGCTTTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAWRGGL*FWLWLG Trigger: TCCAAGCCAAAGCCAGAATCAGAGTCCACCTCTCCA...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTGTACTGCTGGGTGTTaGGGAACCAGGGCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCCTAGC*GTRADD Trigger: ATCATCAGCCCTGGTTCCTCAACACCCAGCAGTACA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCAGTGACTTCACTGGCTaGCACAGGGTTCGCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPASDFTG*HRVRSN Trigger: GTTACTGCGAACCCTGTGCCAGCCAGTGAAGTCACT...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCCAATCGTCGATGTGGTaGAAATCGTGGAGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAQSSMW*KSWRPG Trigger: TCCTGGCCTCCACGATTTCCACCACATCGACGATTG...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTACCACTCCGGCCGATaGCGTCTCTGTGTGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAYHSGR*RLCVRD Trigger: GTCCCGCACACAGAGACGCCATCGGCCGGAGTGGTA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCCAGGACGACAAGCCTTaGATGGATTCCATGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAQDDKP*MDSMVL Trigger: CAACACCATGGAATCCATTCAAGGCTTGTCGTCCTG...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR TCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAGGCAGGTGGGGCAGATaGCGGCCCCACTGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVGRWGR*RPHWLS Trigger: AGAGAGCCAGTGGGGCCGTCATCTGCCCCACCTGCC...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTACTCAATCGTCGATGTaGTGGAAATCGTGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCTQSSM*WKSWRP Trigger: TGGCCTCCACGATTTCCACCACATCGACGATTGAGT...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCAAAATGCTCAGCCATaGTCCCTTGAAGGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCQNAQP*SLEGGN Trigger: GTTCCCTCCTTCAAGGGACCATGGCTGAGCATTTTG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCCTGGGAGGGAAGAATaGGCGTTTTGGTGCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCPGREE*AFWCKE Trigger: TTCTTTGCACCAAAACGCCCATTCTTCCCTCCCAGG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCCTTCAATTCTTACTCTTCCTGCTTGGCTTCCTCAGGGCTCAGGTTACGGTGGGGCACACGGTaGGGCTTTCGAGACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAFNSYSSCLASSGLRLRWGTR*GFRDTF Trigger: GAAAGTGTCTCGAAAGCCTCACCGTGTGCCCCACCG...TAACCTGAGCCCTGAGGAAGCCAAGCAGGAAGAGTAAGAATTGAAGGCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTGGCTTGGAGACCTCTaGGGATTGGCACACGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAWLGDL*GLAHGN Trigger: GTTGCCGTGTGCCAATCCTCAGAGGTCTCCAAGCCA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCAGATGGAGGAGGCCCTaGATACTCAAAATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPARWRRP*ILKISV Trigger: TACCGAGATTTTGAGTATTCAGGGCCTCCTCCATCT...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCAACTCAGAGGCACTTaGGGGACCATTGTCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCQLRGT*GTIVKR Trigger: TCTTTTGACAATGGTCCCTCAAGTGCCTCTGAGTTG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTGTGAGATGGTGTTGTaGCAGGTGCAGGTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCCEMVL*QVQVFS Trigger: TGAAAACACCTGCACCTGCCACAACACCATCTCACA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCTAGTAGGACCACGCTaGAAGTCTGAGGCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLALVGPR*KSEAWP Trigger: GGGCCATGCCTCAGACTTCCAGCGTGGTCCTACTAG...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTTGGCTGGTACTCAGTaGCATCAGAAAGCTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCLAGTQ*HQKACL Trigger: CAAGCAAGCTTTCTGATGCCACTGAGTACCAGCCAA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCCTCTCCTGGAGGAGGTaGTGGGCCAGCGTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGLSWRR*WASVGQ Trigger: CTGGCCCACGCTGGCCCACCACCTCCTCCAGGAGAG...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAAGACTCCAGGGCCCCTaGGGACGAGGCCGACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGERLQGP*GRGRRG Trigger: TCCTCGTCGGCCTCGTCCGCAGGGGCCCTGGAGTCT...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTTGGCTTCCTCAGGGCTCAGGTTACAGGTGGTAGCACATCTAGTTCACTGGTGGGCACACCAGTaGAGACAGCAGGTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLASSGLRLQVVAHLVHWWAHQ*RQQVSP Trigger: TGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCA...GTGAACTAGATGTGCTACCACCTGTAACCTGAGCCCTGAGGAAGCCAAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCCACATTTGCCAGGTTTaGCAAAACCAAAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAHICQV*QNQSWG Trigger: TCCCCAACTTTGGTTTTGCCAAACCTGGCAAATGTG...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCGGCAACTTCAGTAGGTaGGGCAGCAGGGCTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAGNFSR*GSRARI Trigger: AATCCTAGCCCTGCTGCCCCACCTACTGAAGTTGCC...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTCCATCATCTCATCCTaGGTGGGTGTCCCACTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLASIISS*VGVPLR Trigger: ACGGAGTGGGACACCCACCCAGGATGAGATGATGGA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTTGAAGTACCCTTGTTaGGTGTCTGGCCAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCLKYPC*VSGQNA Trigger: AGCATTTTGGCCAGACACCCAACAAGGGTACTTCAA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACTCTCCTGGAGGAGGTaGTGGGCCAGCGTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTLSWRR*WASVGQ Trigger: CTGGCCCACGCTGGCCCACCACCTCCTCCAGGAGAG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAGAAGGCCACTGCTGCTaGTGTTGCCTCCCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVEGHCC*CCLPHL Trigger: GAGGTGGGGGAGGCAACACCAGCAGCAGTGGCCTTC...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCTGCAGGACGACAAGCCTTaGATGGATTCCATGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QQWSYRHTQLSLVVVWVLQDDKP*MDSMVL Trigger: CAACACCATGGAATCCATTCAAGGCTTGTCGTCCTG...CAGCACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCGATGTGGGACTGAGTaGGGAGAGTCTGGGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLARCGTE*GESGYC Trigger: ACAATACCCAGACTCTCCTCACTCAGTCCCACATCG...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAGCTCAGGCTCTCTCGTaGACGGTTAAGACCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVAQALS*TVKTRA Trigger: GGCCCTGGTCTTAACCGTTCACGAGAGAGCCTGAGC...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGTACAGTCGGGACAGAAGTGCAGTaGTCAGAGGCTTCGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DEIQCFCLSFCTCVCSTVGTEVQ*SEASGE Trigger: CTCTCCCGAAGCCTCTGAGCACTGCACTTCTGTCCC...GACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTGGCATCAGAAAGCTTaGTTGACTTCAGGATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCWHQKA*LTSGWI Trigger: AATCCATCCTGAAGTCAAGCAAGCTTTCTGATGCCA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCAGGGAAGGCCACTGCTaGTGGTGTTGCCTCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGREGHC*WCCLPH Trigger: GTGGGGGAGGCAACACCAGCAGCAGTGGCCTTCCCT...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGATGGCGTCTCTGTGTaGGGGACTCAAGGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKADGVSV*GTQGKA Trigger: GGCCTTCCCTTGAGTCCCGCACACAGAGACGCCATC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTTGGCTTCCTCAGGGCTCAGGTTACAGGTGGTAGCACATCTAGTTCACTCACCTCCCATGCCCTaGAATGGAGACTCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLASSGLRLQVVAHLVHSPPMP*NGDSEP Trigger: TGGTTCTGAGTCTCCATTCCAGGGCATGGGAGGTGA...GTGAACTAGATGTGCTACCACCTGTAACCTGAGCCCTGAGGAAGCCAAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGACTTGTCACTCTCCATaGCCGGTGACTGGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQQWSYRHTQLSLVVVWVTCHSP*PVTGVL Trigger: AAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGT...CACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTTTTCCACGCCTGATGTaGGTGGGTGGCCTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPFPRLM*VGGLLE Trigger: CTCCAGCAGGCCACCCACCCACATCAGGCGTGGAAA...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTACCCACTGGCTCTCTCTaGAAGGGTGCCCCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVPTGSL*KGAPCS Trigger: GGAACATGGGGCACCCTTCCAGAGAGAGCCAGTGGG...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTCCCACTGGCTCTCTCTaGAAGGGTGCCCCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPPTGSL*KGAPCS Trigger: GGAACATGGGGCACCCTTCCAGAGAGAGCCAGTGGG...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGACCTCCTCCAAGGGCTaGGCCCAGGTGCTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMTSSKG*AQVLQR Trigger: CCTCTGGAGCACCTGGGCCCAGCCCTTGGAGGAGGT...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CAA 72 bp | GTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTaGTGTGTGCTACCACATCTAGCAAGAGAAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPFSCPCLPVLD*CVLPHLARENF Trigger: AAAGTTTTCTCTTGCTAGATGTGGTAGCACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCCGGTGGGGCACACGGTaGGGCTTTCGAGACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGRWGTR*GFRDTF Trigger: GAAAGTGTCTCGAAAGCCTCACCGTGTGCCCCACCG...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATGGCTTGGAGACCTCTaGGGATTGGCACACGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAWLGDL*GLAHGN Trigger: GTTGCCGTGTGCCAATCCTCAGAGGTCTCCAAGCCA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACGAGGGAAGGCAGACTTaGCCCCAAACTCTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHEGRQT*PQTLGP Trigger: GGGCCCAAGAGTTTGGGGTCAAGTCTGCCTTCCCTC...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGCTCAGGCTCTCTCGTaGACGGTTAAGACCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGAQALS*TVKTRA Trigger: GGCCCTGGTCTTAACCGTTCACGAGAGAGCCTGAGC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCAAGAGCTGCCTGGTGTaGTCAGATCAAACCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAKSCLV*SDQTNP Trigger: TGGGTTGGTTTGATCTGAGCACACCAGGCAGCTCTT...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGATGGCGTCTCTGTGTaGGGGACTCAAGGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGDGVSV*GTQGKA Trigger: GGCCTTCCCTTGAGTCCCGCACACAGAGACGCCATC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCAATGATGACAAGCCTTaGAGTGCAGGGGCTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLANDDKP*SAGADC Trigger: ACAGTCAGCCCCTGCACTCCAAGGCTTGTCATCATT...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCGAGACCTCTGAGGATTaGCACACGGCAACTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAETSED*HTATSV Trigger: TACTGAAGTTGCCGTGTGCCAATCCTCAGAGGTCTC...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCCTTTCAAGAAGTTGTaGATCTTCATTTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCPFKKL*IFISRL Trigger: AAGCCTGGAAATGAAGATCCACAACTTCTTGAAAGG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAGGTGGTGGGCCAGCGTaGGCCAGAGATGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEGGGPA*ARDASF Trigger: AAAGGAGGCATCTCTGGCCCACGCTGGCCCACCACC...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATTCCGCTGTGCTCTCCTaGAGGAGGTGGTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNSAVLS*RRWWAS Trigger: GCTGGCCCACCACCTCCTCCAGGAGAGCACAGCGGA...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATACCACTCCGGCCGATaGCGTCTCTGTGTGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTYHSGR*RLCVRD Trigger: GTCCCGCACACAGAGACGCCATCGGCCGGAGTGGTA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGGGAGGGAAGAATaGGCGTTTTGGTGCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAPGREE*AFWCKE Trigger: TTCTTTGCACCAAAACGCCCATTCTTCCCTCCCAGG...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCAAGCACATCAGCAAATaGTTCACGAAATATGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAKHISK*FTKYDC Trigger: GCAATCATATTTCGTGAATCATTTGCTGATGTGCTT...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTTCTATCTGATCTTCTaGTCGTTTGTACATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCFYLIF*SFVHQQ Trigger: TTGCTGATGTACAAACGATCAGAAGATCAGATAGAA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTAGGGTTGACTTCAATTaGTCCAACTTCTTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRALLLPLPPSAGLVCRVDFN*SNFFFK Trigger: CTTAAAGAAGAAGTTGGATCAATTGAAGTCAACCCT...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACGGTGGGGCACACGGTaGGGCTTTCGAGACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTRWGTR*GFRDTF Trigger: GAAAGTGTCTCGAAAGCCTCACCGTGTGCCCCACCG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGGAACGATGTGGGACTaGGTGAGGAGAGTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAGTMWD*VRRVWV Trigger: TACCCAGACTCTCCTCACTCAGTCCCACATCGTTCC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCGGCAAGGGTACTCTGTaGAGAGAAAATGGAACGATG | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAGKGTL*RENGTM Trigger: CATCGTTCCATTTTCTCTTCACAGAGTACCCTTGCC...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGGACTTTTTCCACGCCTaGTGTGGGTGGGTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMDFFHA*CGWVAC Trigger: GCAGGCCACCCACCCACATCAGGCGTGGAAAAAGTC...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGACTTTTTCCACGCCTaGTGTGGGTGGGTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTDFFHA*CGWVAC Trigger: GCAGGCCACCCACCCACATCAGGCGTGGAAAAAGTC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGCTGGTGACACTCTCCTaGAACTGGGGTGCCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMLVTLS*NWGARS Trigger: GGAACGGGCACCCCAGTTTCAGGAGAGTGTCACCAG...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGGTCCCTGGGTCCTGTaGGCACCCCAAAATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTGPWVL*APQNAQ Trigger: CTGAGCATTTTGGGGTGCTCACAGGACCCAGGGACC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACGGGACAGAAGTGCAGTaGTCAGAGGCTTCGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHGTEVQ*SEASGE Trigger: CTCTCCCGAAGCCTCTGAGCACTGCACTTCTGTCCC...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGTGGCGACCTTGTACTaGTGGGTGTTGAGGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPVATLY*WVLRNQ Trigger: CTGGTTCCTCAACACCCAGCAGTACAAGGTCGCCAC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGCCCCAGTTACTCCATaGTCTGGCAGTGGTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAAPVTP*SGSGGV Trigger: AACTCCACCACTGCCAGAGCATGGAGTAACTGGGGC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCTGCACATTTGCCAGGTTTaGCAAAACCAAAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQWSYRHTQLSLVVVWVLHICQV*QNQSWG Trigger: TCCCCAACTTTGGTTTTGCCAAACCTGGCAAATGTG...CAGCACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCACCTCTGATGGGGCACTaGATCCCAAGCTGCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAPLMGH*IPSCLG Trigger: TCCTAAGCAGCTTGGGATCCAGTGCCCCATCAGAGG...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCTGGAAGTCTGAGGCATaGCCCTCTGATGGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGWKSEA*PSDGAL Trigger: CAGTGCCCCATCAGAGGGCCATGCCTCAGACTTCCA...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATTTCCACGCCTGATGTaGGTGGGTGGCCTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTFPRLM*VGGLLE Trigger: CTCCAGCAGGCCACCCACCCACATCAGGCGTGGAAA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGGTACAACCCCAGAGTaGTCAACAGGGGGTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTGTTPE*STGGGG Trigger: GCCTCCACCCCCTGTTGACCACTCTGGGGTTGTACC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAAGGTGCTCCAGAGGATaGGAAGGCAGGCTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTRCSRG*EGRLRL Trigger: GAGCCTGAGCCTGCCTTCCCATCCTCTGGAGCACCT...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR TCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATACTCTCCATGGCCGGTaGCTGGGGTTCTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNTLHGR*LGFFTS Trigger: GGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGT...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGAATGCTCTCTGGGGTaGTCTCCACCTTTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPECSLG*SPPLTG Trigger: TCCTGTCAAAGGTGGAGATCACCCCAGAGAGCATTC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGAATGCTCTCTGGGGTaGTCTCCACCTTTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAECSLG*SPPLTG Trigger: TCCTGTCAAAGGTGGAGATCACCCCAGAGAGCATTC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTATTGGAGTGCAGGGGCTaGCTGTGTCTGGGTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVLECRG*LCLGFR Trigger: TCTAAAACCCAGACACAGTCAGCCCCTGCACTCCAA...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTGCCCAGCAGTAGACTaGGACAAGCCACTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHCPAVD*DKPLWL Trigger: CAACCACAGTGGCTTGTCTCAGTCTACTGCTGGGCA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTACGATGTGGGACTGAGTaGGGAGAGTCTGGGTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVRCGTE*GESGYC Trigger: ACAATACCCAGACTCTCCTCACTCAGTCCCACATCG...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTCTTTATCGGCTCCCCTaGCATCCTCCTATTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPLYRLP*HPPISC Trigger: GCAGCTAATAGGAGGATGTCAGGGGAGCCGATAAAG...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAGAGAAGATACCACCATaGTCCTTAGGAGGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVEKIPP*SLGGAG Trigger: ACCTGCCCCTCCTAAGGATCATGGTGGTATCTTCTC...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGTTCTTCACCTCCCATaGCCTGGAATGGAGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPVLHLP*PGMETQ Trigger: CTGAGTCTCCATTCCAGGGCATGGGAGGTGAAGAAC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTTGGTGTTGTGGCAGGTaGAGGTGTTTTCAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPWCCGR*RCFQAT Trigger: AGTGGCCTGAAAACACCTGCACCTGCCACAACACCA...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTAGGGAAGGCCACTGCTaGTGGTGTTGCCTCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFREGHC*WCCLPH Trigger: GTGGGGGAGGCAACACCAGCAGCAGTGGCCTTCCCT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | TCTCAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGGTGTTGGTCACCGACTaGAATTTTCGATCCAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQQWSYRHTQLSLVVVWVVLVTD*NFRSNE Trigger: TTCGTTGGATCGAAAATTCCAGTCGGTGACCAACAC...CACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTTGGCTTCCTCAGGGCTCAGGTTACAGGTGGTAGCACATCTAGTTCACTGGATTCCATGGTGTTaGTCACCGACTGGAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLASSGLRLQVVAHLVHWIPWC*SPTGIF Trigger: GAAAATTCCAGTCGGTGACCAACACCATGGAATCCA...GTGAACTAGATGTGCTACCACCTGTAACCTGAGCCCTGAGGAAGCCAAGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCACGACAAGCCTTGAATaGATTCCATGGTGTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLATTSLE*IPWCWS Trigger: TGACCAACACCATGGAATCCATTCAAGGCTTGTCGT...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTGGTGGGCACACCAGTaGAGACAGCAGGTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHWWAHQ*RQQVSP Trigger: TGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACCAGAGGGTTGTGAGATaGTGTTGTGGCAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHQRVVR*CCGRCR Trigger: CCTGCACCTGCCACAACACCATCTCACAACCCTCTG...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGAGGCTGTGGTGCTCTaGGAAGTGACTTCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGEAVVL*EVTSLA Trigger: AGCCAGTGAAGTCACTTCCCAGAGCACCACAGCCTC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTTGCTTGCTGAAGTaGAAGAGACTTCAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAPCLLK*KRLQKL Trigger: CAACTTCTGAAGTCTCTTCCACTTCAGCAAGCAAGG...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGCGACCTTGTACTGCTaGGTGTTGAGGAACCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTATLYC*VLRNQG Trigger: GCCCTGGTTCCTCAACACCCAGCAGTACAAGGTCGC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTATGGGTATTGTGTCTGTaGCAACGTGAGATGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVWVLCL*QREMPS Trigger: GCTGGGCATCTCACGTTGCCACAGACACAATACCCA...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCACAATCGTCGATGTGGTaGAAATCGTGGAGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAQSSMW*KSWRPG Trigger: TCCTGGCCTCCACGATTTCCACCACATCGACGATTG...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGAAGGCCACTGCTGCTaGTGTTGCCTCCCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFEGHCC*CCLPHL Trigger: GAGGTGGGGGAGGCAACACCAGCAGCAGTGGCCTTC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGAAGAATGGGCGTTTTaGTGCAAAGAACGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPEEWAF*CKERRA Trigger: GGCCCTCCGTTCTTTGCACCAAAACGCCCATTCTTC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCATCCACTCTCATAGTTaGCAACTGTTTCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAIHSHS*QLFLLQ Trigger: CTGAAGGAGAAACAGTTGTCAACTATGAGAGTGGAT...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATCCTGGAGAAGGTCTTaGTGCAGAACTGACCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTSWRRS*CRTDPR Trigger: ACGGGGGTCAGTTCTGCATCAAGACCTTCTCCAGGA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR TCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTGTACTGCTGGGTGTTaGGGAACCAGGGCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHCTAGC*GTRADD Trigger: ATCATCAGCCCTGGTTCCTCAACACCCAGCAGTACA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGGGAACGATGTGGGACTaGGTGAGGAGAGTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMGTMWD*VRRVWV Trigger: TACCCAGACTCTCCTCACTCAGTCCCACATCGTTCC...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGGGCTGGGTGAGGTTTaGGAGACTGACACCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTGLGEV*ETDTIT Trigger: AGTGATGGTGTCAGTCTCTCAAACCTCACCCAGCCC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR TCA 90 bp | CAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCTGTCTTTCAGCTGCTTCTaGGTTTTGAAAGTGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QQWSYRHTQLSLVVVWVLSFSCF*VLKVVL Trigger: AAGTACCACTTTCAAAACTCAGAAGCAGCTGAAAGA...CAGCACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATGGGACAGAAGTGCAGTaGTCAGAGGCTTCGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNGTEVQ*SEASGE Trigger: CTCTCCCGAAGCCTCTGAGCACTGCACTTCTGTCCC...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAGTGGCGACCTTGTACTaGTGGGTGTTGAGGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEVATLY*WVLRNQ Trigger: CTGGTTCCTCAACACCCAGCAGTACAAGGTCGCCAC...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACTCTCTCTGGAAGGGTaGCCCATGTTCCAAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTLSLEG*PMFQRG Trigger: TCCCCTTTGGAACATGGGGCACCCTTCCAGAGAGAG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGTACAGTCAGACTCAGAACCAGTTaGGGAAGGAGCATCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: DEIQCFCLSFCTCVCSTVRLRTS*GRSIHT Trigger: AGTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCT...GACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATGGCAAAACCAAAGTTaGGGAAGGGGACAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAWQNQS*GRGQKC Trigger: GCACTTCTGTCCCCTTCCCCAACTTTGGTTTTGCCA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAAATGATGACAAGCCTTaGAGTGCAGGGGCTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVNDDKP*SAGADC Trigger: ACAGTCAGCCCCTGCACTCCAAGGCTTGTCATCATT...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATGCGACCTTGTACTGCTaGGTGTTGAGGAACCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNATLYC*VLRNQG Trigger: GCCCTGGTTCCTCAACACCCAGCAGTACAAGGTCGC...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGCTTTCATCTCTTCCTaGAGGTGGCGACCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAAFISS*RWRPCT Trigger: AGTACAAGGTCGCCACCTCCAGGAAGAGATGAAAGC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTATGTTCTTCCTGTTGTTaGTCAGTGGTGGGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVCSSCC*SVVGKL Trigger: CAGCTTGCCCACCACTGACCAACAACAGGAAGAACA...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGGTACAACCCCAGAGTaGTCAACAGGGGGTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFGTTPE*STGGGG Trigger: GCCTCCACCCCCTGTTGACCACTCTGGGGTTGTACC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTGGCAGTGGTGGAGTTaGGAAAGGTACAACCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHWQWWS*ERYNPR Trigger: TCTGGGGTTGTACCTTTCCCAACTCCACCACTGCCA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGGGAACTATGGTCCTTaGGAAAAACTGACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAGNYGP*EKLTQP Trigger: GGGCTGTGTCAGTTTTTCCCAAGGACCATAGTTCCC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTAGGTGCTCCAGAGGATaGGAAGGCAGGCTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFRCSRG*EGRLRL Trigger: GAGCCTGAGCCTGCCTTCCCATCCTCTGGAGCACCT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCAAGCACATCAGCAAATaGTTCACGAAATATGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRQDQRHYQCRAPSLHVKHISK*FTKYDC Trigger: GCAATCATATTTCGTGAATCATTTGCTGATGTGCTT...GACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | CAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCTGATTCGTGGATGTTTGTaGTTTCTTCCACTGCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QQWSYRHTQLSLVVVWVLIRGCL*FLPLLI Trigger: AATAAGCAGTGGAAGAAATCACAAACATCCACGAAT...CAGCACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCTTCTATCTGATCTTCTaGTCGTTTGTACATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGRQDQRHYQCRAPSLHVFYLIF*SFVHQQ Trigger: TTGCTGATGTACAAACGATCAGAAGATCAGATAGAA...GACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATTTGCCAGAGGGTTGTaGGATGGTGTTGTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTFARGL*DGVVAG Trigger: ACCTGCCACAACACCATCTCACAACCCTCTGGCAAA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATGGAGAGGTGGACTCTaGTTCTGGCTTTGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEWRGGL*FWLWLG Trigger: TCCAAGCCAAAGCCAGAATCAGAGTCCACCTCTCCA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCACATTCCCTCTTATGTTaGAGGCACCAAATAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAHSLLC*RHQIAQ Trigger: CTGGGCTATTTGGTGCCTTCAACATAAGAGGGAATG...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTCATTCCCTCTTATGTTaGAGGCACCAAATAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPHSLLC*RHQIAQ Trigger: CTGGGCTATTTGGTGCCTTCAACATAAGAGGGAATG...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTACTGACACCATCACTTaGAGTACCCTTGTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPTDTIT*STLVGC Trigger: ACACCCAACAAGGGTACTTCAAGTGATGGTGTCAGT...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATAAACCAACCCACTCTTaGAACCTCGCGCCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNKPTHS*NLAPMS Trigger: GGACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTT...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAGAGAAGATACCACCATaGTCCTTAGGAGGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEEKIPP*SLGGAG Trigger: ACCTGCCCCTCCTAAGGATCATGGTGGTATCTTCTC...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGTACAGTCTGCCAGATCCACATTTaGCAGGTTTGGCAAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: DEIQCFCLSFCTCVCSTVCQIHI*QVWQNQ Trigger: TTGGTTTTGCCAAACCTGGCAAATGTGGATCTGGCA...GACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATGGTGTTGTGGCAGGTaGAGGTGTTTTCAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEWCCGR*RCFQAT Trigger: AGTGGCCTGAAAACACCTGCACCTGCCACAACACCA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCTCCTGAAACTGGGGTaGCCGTTCCTTGTACGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFLLKLG*PFLVRR Trigger: ACGCCGTACAAGGAACGGGCACCCCAGTTTCAGGAG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAAGCGTGGGCCAGAGATaGCTCCTTTGTAAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGESVGQR*LLCKGV Trigger: AACCCCTTTACAAAGGAGGCATCTCTGGCCCACGCT...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATGCCCCAGTTACTCCATaGTCTGGCAGTGGTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNAPVTP*SGSGGV Trigger: AACTCCACCACTGCCAGAGCATGGAGTAACTGGGGC...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGGAATGGGCGTTTTGGTaGAAAGAACGGAGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMEWAFW*KERRAS Trigger: AGAGGCCCTCCGTTCTTTGCACCAAAACGCCCATTC...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAAGACTCAGAACCAGTTaGGGAAGGAGCATCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKARLRTS*GRSIHT Trigger: AGTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCT...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATCACCTCCCATGCCCTaGAATGGAGACTCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGESPPMP*NGDSEP Trigger: TGGTTCTGAGTCTCCATTCCAGGGCATGGGAGGTGA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGACTTGTCACTCTCCATaGCCGGTGACTGGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMTCHSP*PVTGVL Trigger: AAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGT...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTGGCAAAACCAAAGTTaGGGAAGGGGACAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHWQNQS*GRGQKC Trigger: GCACTTCTGTCCCCTTCCCCAACTTTGGTTTTGCCA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATGGCAACTTCAGTAGGTaGGGCAGCAGGGCTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNGNFSR*GSRARI Trigger: AATCCTAGCCCTGCTGCCCCACCTACTGAAGTTGCC...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTTTCAAGAAGTTGTaGATCTTCATTTCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAPFKKL*IFISRL Trigger: AAGCCTGGAAATGAAGATCCACAACTTCTTGAAAGG...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTTGGAAGTCTGAGGCATaGCCCTCTGATGGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFWKSEA*PSDGAL Trigger: CAGTGCCCCATCAGAGGGCCATGCCTCAGACTTCCA...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAATGTTCCAAAGGGGATaGGGGGAGATGATGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVMFQRG*GEMMLK Trigger: TTTGAGCATCATCTCCCCCCATCCCCTTTGGAACAT...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGGTCTCTTTAAACTGTaGAATGGGTCTCTGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAGLFKL*NGSLPR Trigger: TCTCGGCAGAGACCCATTCCACAGTTTAAAGAGACC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGCTGCTTCTGAGTTTTaGAAGTGGTACCTGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPAASEF*KWYLEN Trigger: GTTTTCCAGGTACCACTTTCAAAACTCAGAAGCAGC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR TCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTTCTATCTGATCTTCTaGTCGTTTGTACATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAFYLIF*SFVHQQ Trigger: TTGCTGATGTACAAACGATCAGAAGATCAGATAGAA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCTCCCCAGTATCTACCAGTGGGTACTCACTCTCAACAGTGGAGCTACATCCTTCAGTTCTATCTaGTCTTCTGATCGTTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPSIYQWVLTLNSGATSFSSI*SSDRLY Trigger: GTACAAACGATCAGAAGATCAGATAGAACTGAAGGA...TGTAGCTCCACTGTTGAGAGTGAGTACCCACTGGTAGATACTGGGGAGAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTAGGGTTGACTTCAATTaGTCCAACTTCTTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTTGSEALPMQSTFTACRVDFN*SNFFFK Trigger: CTTAAAGAAGAAGTTGGATCAATTGAAGTCAACCCT...ACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGTACAGTCTCCGGTCCTCCACAATaGTTTTTGATCCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DEIQCFCLSFCTCVCSTVSGPPQ*FLIHHL Trigger: AAGATGATGGATCAAAAATCATTGTGGAGGACCGGA...GACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATTTGGAGTGCAGGGGCTaGCTGTGTCTGGGTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNLECRG*LCLGFR Trigger: TCTAAAACCCAGACACAGTCAGCCCCTGCACTCCAA...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGGCAAGGGTACTCTGTaGAGAGAAAATGGAACGATG | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGGKGTL*RENGTM Trigger: CATCGTTCCATTTTCTCTTCACAGAGTACCCTTGCC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACACTGACACCATCACTTaGAGTACCCTTGTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHTDTIT*STLVGC Trigger: ACACCCAACAAGGGTACTTCAAGTGATGGTGTCAGT...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATTGGAACGAAAGCTGGTaGCACTCTCCTGAAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNWNESW*HSPETG Trigger: CCCAGTTTCAGGAGAGTGTCACCAGCTTTCGTTCCA...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTTCAGCCATGGTCCCTTaGAGGAGGGAACTATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFSAMVP*RRELWS Trigger: GGACCATAGTTCCCTCCTTCAAGGGACCATGGCTGA...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATGCCAGATCCACATTTaGCAGGTTTGGCAAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKACQIHI*QVWQNQ Trigger: TTGGTTTTGCCAAACCTGGCAAATGTGGATCTGGCA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTTGTGGGTGGGTGGCCTaGTGGAGCGGCAAGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEICGWVA*WSGKGT Trigger: AGTACCCTTGCCGCTCCAGCAGGCCACCCACCCACA...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGGTGTCTGGCCAAAATaGTTATCATCTGAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGGVWPK*LSSEGL Trigger: CAAGCCCTCAGATGATAAGCATTTTGGCCAGACACC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGGGCAGATGAGTGGGTaGCTCTCGAGAGAAGATACC | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFGQMSG*LSREDT Trigger: GGTATCTTCTCTCGAGAGGCACCCACTCATCTGCCC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGTACAGTCAAGAGATTCAAACGATaGGGATATGTAGATCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DEIQCFCLSFCTCVCSTVKRFKR*GYVDLR Trigger: CCGGAGATCTACATATCCCCATCGTTTGAATCTCTT...GACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTTGGCTTCCTCAGGGCTCAGGTTACAGGTGGTAGCACATCTAGTTCACCAAACTCCTCTAGCTTaGAACTTGCTTCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SCLASSGLRLQVVAHLVHQTPLA*NLLLQI Trigger: AATTTGAAGAAGCAAGTTCCAAGCTAGAGGAGTTTG...GTGAACTAGATGTGCTACCACCTGTAACCTGAGCCCTGAGGAAGCCAAGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCAAACTCCTCTAGCTTaGAACTTGCTTCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAQTPLA*NLLLQI Trigger: AATTTGAAGAAGCAAGTTCCAAGCTAGAGGAGTTTG...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATTCACCTCCCATGCCCTaGAATGGAGACTCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNSPPMP*NGDSEP Trigger: TGGTTCTGAGTCTCCATTCCAGGGCATGGGAGGTGA...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTCCTTGCTTGCTGAAGTaGAAGAGACTTCAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPPCLLK*KRLQKL Trigger: CAACTTCTGAAGTCTCTTCCACTTCAGCAAGCAAGG...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGAGACCTCTGAGGATTaGCACACGGCAACTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTETSED*HTATSV Trigger: TACTGAAGTTGCCGTGTGCCAATCCTCAGAGGTCTC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCCTCTGATGGGGCACTaGATCCCAAGCTGCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFPLMGH*IPSCLG Trigger: TCCTAAGCAGCTTGGGATCCAGTGCCCCATCAGAGG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGGCTTTCATCTCTTCCTaGAGGTGGCGACCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMAFISS*RWRPCT Trigger: AGTACAAGGTCGCCACCTCCAGGAAGAGATGAAAGC...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTCTCTAGATTCATCATaGCAGATGGAGGAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMSLDSS*QMEEAL Trigger: CAGGGCCTCCTCCATCTGCCATGATGAATCTAGAGA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATTGAAGTACCCTTGTTaGGTGTCTGGCCAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKALKYPC*VSGQNA Trigger: AGCATTTTGGCCAGACACCCAACAAGGGTACTTCAA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTGTTCTTCCTGTTGTTaGTCAGTGGTGGGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMCSSCC*SVVGKL Trigger: CAGCTTGCCCACCACTGACCAACAACAGGAAGAACA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAAGTTACTCCATGCTCTaGCAGTGGTGGAGTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTSYSML*QWWSWE Trigger: TTCCCAACTCCACCACTGCCAGAGCATGGAGTAACT...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACAAAATGCTCAGCCATaGTCCCTTGAAGGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTQNAQP*SLEGGN Trigger: GTTCCCTCCTTCAAGGGACCATGGCTGAGCATTTTG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CAA 72 bp | AAGAAACCTGCACCTACTCACATGGTGGAGACCAGCTaGCTGTACCACACTTCTCATAAACAAGGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKPAPTHMVETS*LYHTSHKQGFW Trigger: CCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCTGGTCTCCACCATGTGAGTAGGTGCAGGTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAATCCACTCTCATAGTTaGCAACTGTTTCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAIHSHS*QLFLLQ Trigger: CTGAAGGAGAAACAGTTGTCAACTATGAGAGTGGAT...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAAGATGGAGGAGGCCCTaGATACTCAAAATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTRWRRP*ILKISV Trigger: TACCGAGATTTTGAGTATTCAGGGCCTCCTCCATCT...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTGAGGGAAGGCAGACTTaGCCCCAAACTCTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIEGRQT*PQTLGP Trigger: GGGCCCAAGAGTTTGGGGTCAAGTCTGCCTTCCCTC...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTTGGAACGAAAGCTGGTaGCACTCTCCTGAAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFWNESW*HSPETG Trigger: CCCAGTTTCAGGAGAGTGTCACCAGCTTTCGTTCCA...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGCTCAAATGTTGAGTTaGAACTGTTGGAACGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPAQMLS*NCWNES Trigger: GCTTTCGTTCCAACAGTTTCAACTCAACATTTGAGC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR GCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAGTACCTGGAAAACATTaGAGTTTTTGCAGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVVPGKH*SFCSLA Trigger: TGCCAGACTGCAAAAACTGCAATGTTTTCCAGGTAC...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGTTCTTCACCTCCCATaGCCTGGAATGGAGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFVLHLP*PGMETQ Trigger: CTGAGTCTCCATTCCAGGGCATGGGAGGTGAAGAAC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR GCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCTGCCAGATCCACATTTaGCAGGTTTGGCAAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGCQIHI*QVWQNQ Trigger: TTGGTTTTGCCAAACCTGGCAAATGTGGATCTGGCA...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAGGTGTCTGGCCAAAATaGTTATCATCTGAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEGVWPK*LSSEGL Trigger: CAAGCCCTCAGATGATAAGCATTTTGGCCAGACACC...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR GCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATAAGAGCTGCCTGGTGTaGTCAGATCAAACCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNKSCLV*SDQTNP Trigger: TGGGTTGGTTTGATCTGAGCACACCAGGCAGCTCTT...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTCACTGCTGCTGGTGTTaGCTCCCCCACCTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIHCCWC*LPHLLQ Trigger: TTGGAGGAGGTGGGGGAGGCAACACCAGCAGCAGTG...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR GCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGAATGGGCGTTTTGGTaGAAAGAACGGAGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFEWAFW*KERRAS Trigger: AGAGGCCCTCCGTTCTTTGCACCAAAACGCCCATTC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTGCAGTCTGGCATTATaGGAAGCTGCTCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMCSLAL*EAALSI Trigger: AATGGACAGAGCAGCTTCCCATAATGCCAGACTGCA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTACTTGTCACTCTCCATaGCCGGTGACTGGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFTCHSP*PVTGVL Trigger: AAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATGTGAGATGGTGTTGTaGCAGGTGCAGGTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTCEMVL*QVQVFS Trigger: TGAAAACACCTGCACCTGCCACAACACCATCTCACA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCCAGGCTTGGAGAGGTaGACTCTGATTCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFPGLER*TLILAL Trigger: CAAAGCCAGAATCAGAGTCCACCTCTCCAAGCCTGG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACTACGCTGCTGGATGTaGGCTTATCCATCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTLRCWM*AYPSSH Trigger: ATGAGATGATGGATAAGCCCACATCCAGCAGCGTAG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATTCTCTAGATTCATCATaGCAGATGGAGGAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNSLDSS*QMEEAL Trigger: CAGGGCCTCCTCCATCTGCCATGATGAATCTAGAGA...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTTGGCTGGTACTCAGTaGCATCAGAAAGCTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMLAGTQ*HQKACL Trigger: CAAGCAAGCTTTCTGATGCCACTGAGTACCAGCCAA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATACTCAATCGTCGATGTaGTGGAAATCGTGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNTQSSM*WKSWRP Trigger: TGGCCTCCACGATTTCCACCACATCGACGATTGAGT...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAATGTTCCAAAGGGGATaGGGGGAGATGATGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTMFQRG*GEMMLK Trigger: TTTGAGCATCATCTCCCCCCATCCCCTTTGGAACAT...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTTGGCAGTGGTGGAGTTaGGAAAGGTACAACCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFWQWWS*ERYNPR Trigger: TCTGGGGTTGTACCTTTCCCAACTCCACCACTGCCA...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATATGCTCTGGCAGTGGTaGAGTTGGGAAAGGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNMLWQW*SWERYN Trigger: GTTGTACCTTTCCCAACTCCACCACTGCCAGAGCAT...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATGGGAACTATGGTCCTTaGGAAAAACTGACACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNGNYGP*EKLTQP Trigger: GGGCTGTGTCAGTTTTTCCCAAGGACCATAGTTCCC...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CAA 72 bp | CCTCCTTTTCTTTCCTCTGTAGAGTCCTGTGTGAACTaGCTGGAATTCCTTCAAAAGCTCAACACACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPFLSSVESCVN*LEFLQKLNTLV Trigger: CACCAGTGTGTTGAGCTTTTGAAGGAATTCCAGCAAGTTCACACAGGACTCTACAGAGGAAAGAAAAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGGTGATCTCCACCTTTaGCAGGATATTTGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFGDLHL*QDICQR Trigger: CCTCTGGCAAATATCCTGTCAAAGGTGGAGATCACC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGCTCAAATGTTGAGTTaGAACTGTTGGAACGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HEVMISCIFVRRPIGQKGAQMLS*NCWNES Trigger: GCTTTCGTTCCAACAGTTTCAACTCAACATTTGAGC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTATGATGCTCAAATGTTaGGTTGAAACTGTTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPMMLKC*VETVGT Trigger: CGTTCCAACAGTTTCAACTCAACATTTGAGCATCAT...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTACACTTCCTTGTACTGTaGTTCATAGAAAATTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVHFLVL*FIENSS Trigger: GCTGGAATTTTCTATGAAGCACAGTACAAGGAAGTG...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTGGCATCAGAAAGCTTaGTTGACTTCAGGATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHWHQKA*LTSGWI Trigger: AATCCATCCTGAAGTCAAGCAAGCTTTCTGATGCCA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATGGATTCCATGGTGTTaGTCACCGACTGGAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEWIPWC*SPTGIF Trigger: GAAAATTCCAGTCGGTGACCAACACCATGGAATCCA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACAAGAGATTCAAACGATaGGGATATGTAGATCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHKRFKR*GYVDLR Trigger: CCGGAGATCTACATATCCCCATCGTTTGAATCTCTT...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTCTAGTAGGACCACGCTaGAAGTCTGAGGCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEILVGPR*KSEAWP Trigger: GGGCCATGCCTCAGACTTCCAGCGTGGTCCTACTAG...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAACTTCAGGATGGATTTaGCTGGTTTCTTCTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKATSGWI*LVSSLD Trigger: ATCTAGAGAAGAAACCAGCCAAATCCATCCTGAAGT...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTCTGTGAAGAGAAAATaGAACGATGTGGGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHSVKRK*NDVGLS Trigger: ACTCAGTCCCACATCGTTCCATTTTCTCTTCACAGA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATATGTGGTGGAAATCGTaGAGGCCAGGACTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNMWWKS*RPGLFP Trigger: TGGAAAAAGTCCTGGCCTCCACGATTTCCACCACAT...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CAA 72 bp | TGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCTaGAGAGGAAAGAACTGGCTCAAAACGGATGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CIFVRRPIGQKG*RGKNWLKTDVN Trigger: ATTCACATCCGTTTTGAGCCAGTTCTTTCCTCTCAAGCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATCTTTCAGCTGCTTCTaGGTTTTGAAAGTGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTSFSCF*VLKVVP Trigger: AGGTACCACTTTCAAAACTCAGAAGCAGCTGAAAGA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTAGGGTTGACTTCAATTaGTCCAACTTCTTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPRVDFN*SNFFFK Trigger: CTTAAAGAAGAAGTTGGATCAATTGAAGTCAACCCT...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATCCGGTCCTCCACAATaGTTTTTGATCCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGESGPPQ*FLIHHL Trigger: AAGATGATGGATCAAAAATCATTGTGGAGGACCGGA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATCCGGTCCTCCACAATaGTTTTTGATCCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTSGPPQ*FLIHHL Trigger: AAGATGATGGATCAAAAATCATTGTGGAGGACCGGA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTTCGCAGTAACACTCTaGAGTAATGATGACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMFAVTL*SNDDKP Trigger: AGGCTTGTCATCATTACTTCAGAGTGTTACTGCGAA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATTCGCAGTAACACTCTaGAGTAATGATGACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEFAVTL*SNDDKP Trigger: AGGCTTGTCATCATTACTTCAGAGTGTTACTGCGAA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTAGAGACTTCAGAAGTTaGAGAACTAGGAGAATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVAGRELPSKLNQLSENPRDFRS*RTRRIV Trigger: AACTATTCTCCTAGTTCTTCAACTTCTGAAGTCTCT...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATTAAGTTTAAGCCACTaGAACCAGGATTACCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKALSLSH*NQDYLS Trigger: TGAAAGGTAATCCTGGTTTCAGTGGCTTAAACTTAA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTGGGCTGGGTGAGGTTTaGGAGACTGACACCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIGLGEV*ETDTIT Trigger: AGTGATGGTGTCAGTCTCTCAAACCTCACCCAGCCC...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTATGTGATTTCTTCCACTaGTTATTCGGTTGTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVCDFFH*LFGCLF Trigger: GAACAAACAACCGAATAAGCAGTGGAAGAAATCACA...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGCAGTTTTTGCAGTCTaGCATTATGGGAAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFAVFAV*HYGKLL Trigger: GAGCAGCTTCCCATAATGCCAGACTGCAAAAACTGC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACCAGCTTTTGGATTCGTaGATGTTTGTGATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHQLLDS*MFVISS Trigger: GGAAGAAATCACAAACATCCACGAATCCAAAAGCTG...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTAGACTCAGAACCAGTTaGGGAAGGAGCATCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFRLRTS*GRSIHT Trigger: AGTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTTGGTGGGCACACCAGTaGAGACAGCAGGTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIWWAHQ*RQQVSP Trigger: TGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCA...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATTGGGAATAAAAGACTaGGTACTGGAGAGTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: AHDTFLGVKPSSDDTRKALGIKD*VLESRF Trigger: AAATCTACTCTCCAGTACCCAGTCTTTTATTCCCAA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTTCCATCATCTCATCCTaGGTGGGTGTCCCACTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEISIISS*VGVPLR Trigger: ACGGAGTGGGACACCCACCCAGGATGAGATGATGGA...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCTACGCTGCTGGATGTaGGCTTATCCATCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFLRCWM*AYPSSH Trigger: ATGAGATGATGGATAAGCCCACATCCAGCAGCGTAG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTCTGTGAAGAGAAAATaGAACGATGTGGGACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMSVKRK*NDVGLS Trigger: ACTCAGTCCCACATCGTTCCATTTTCTCTTCACAGA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTATGTGGTGGAAATCGTaGAGGCCAGGACTTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFMWWKS*RPGLFP Trigger: TGGAAAAAGTCCTGGCCTCCACGATTTCCACCACAT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATCCCTTGTTGGGTGTCTaGCCAAAATGCTTATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VRESRRQGLRIDTENHQNPLLGV*PKCLSS Trigger: AGATGATAAGCATTTTGGCCAGACACCCAACAAGGG...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGGTCTCTTTAAACTGTaGAATGGGTCTCTGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFGLFKL*NGSLPR Trigger: TCTCGGCAGAGACCCATTCCACAGTTTAAAGAGACC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| 3UTR CAA 72 bp | CATCAGCAAGGCCAAGACCCAAATAACACCCCAACATaGCACGTTATTACCTGTACTGACCGAAGTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: HQQGQDPNNTPT*HVITCTDRSFI Trigger: AATAAAACTTCGGTCAGTACAGGTAATAACGTGCAATGTTGGGGTGTTATTTGGGTCTTGGCCTTGCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACAAGCACATCAGCAAATaGTTCACGAAATATGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHKHISK*FTKYDC Trigger: GCAATCATATTTCGTGAATCATTTGCTGATGTGCTT...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATCCTTCAGTTCTATCTaGTCTTCTGATCGTTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGESFSSI*SSDRLY Trigger: GTACAAACGATCAGAAGATCAGATAGAACTGAAGGA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTTTTGCCAGAGGGTTGTaGGATGGTGTTGTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIFARGL*DGVVAG Trigger: ACCTGCCACAACACCATCTCACAACCCTCTGGCAAA...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACAGAGACTTCAGAAGTTaGAGAACTAGGAGAATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHRDFRS*RTRRIV Trigger: AACTATTCTCCTAGTTCTTCAACTTCTGAAGTCTCT...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGATGATGCTCAAATGTTaGGTTGAAACTGTTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMMMLKC*VETVGT Trigger: CGTTCCAACAGTTTCAACTCAACATTTGAGCATCAT...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | CTGGAGACCAAAATGACACCGTGTGCCTTCCTCTGTCACTATCTAATTTTGGGATGTGATTTCTTCCACTaGTTATTCGGTTGTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LETKMTPCAFLCHYLILGCDFFH*LFGCLF Trigger: GAACAAACAACCGAATAAGCAGTGGAAGAAATCACA...TCCCAAAATTAGATAGTGACAGAGGAAGGCACACGGTGTCATTTTGGTCTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAACACTTCCTTGTACTGTaGTTCATAGAAAATTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEHFLVL*FIENSS Trigger: GCTGGAATTTTCTATGAAGCACAGTACAAGGAAGTG...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR GCA 90 bp | TGTTACACTTCAAAGCACAGTAAAAAGGTAAACGCAGACGCAAGAAAAACATTTGTTCTTCACCTCCCATaGCCTGGAATGGAGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYTSKHSKKVNADARKTFVLHLP*PGMETQ Trigger: CTGAGTCTCCATTCCAGGGCATGGGAGGTGAAGAAC...AAATGTTTTTCTTGCGTCTGCGTTTACCTTTTTACTGTGCTTTGAAGTGTAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTAGCGTGGGCCAGAGATaGCTCCTTTGTAAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEISVGQR*LLCKGV Trigger: AACCCCTTTACAAAGGAGGCATCTCTGGCCCACGCT...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACCAAACTCCTCTAGCTTaGAACTTGCTTCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: AAAMLLKTVILLQHFRNHQTPLA*NLLLQI Trigger: AATTTGAAGAAGCAAGTTCCAAGCTAGAGGAGTTTG...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCACATTTGCCAGGTTTaGCAAAACCAAAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFHICQV*QNQSWG Trigger: TCCCCAACTTTGGTTTTGCCAAACCTGGCAAATGTG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTAGTGACTTCACTGGCTaGCACAGGGTTCGCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEISDFTG*HRVRSN Trigger: GTTACTGCGAACCCTGTGCCAGCCAGTGAAGTCACT...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTCCAGGCTTGGAGAGGTaGACTCTGATTCTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIPGLER*TLILAL Trigger: CAAAGCCAGAATCAGAGTCCACCTCTCCAAGCCTGG...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAACTTCAGGATGGATTTaGCTGGTTTCTTCTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTTSGWI*LVSSLD Trigger: ATCTAGAGAAGAAACCAGCCAAATCCATCCTGAAGT...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTTGGGTATTGTGTCTGTaGCAACGTGAGATGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIWVLCL*QREMPS Trigger: GCTGGGCATCTCACGTTGCCACAGACACAATACCCA...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR TCA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAATTCGTGGATGTTTGTaGTTTCTTCCACTGCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: NTLPENLVCSVCFPDTKTIRGCL*FLPLLI Trigger: AATAAGCAGTGGAAGAAATCACAAACATCCACGAAT...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
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| CDS-3UTR TCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTGGTGATCTCCACCTTTaGCAGGATATTTGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIGDLHL*QDICQR Trigger: CCTCTGGCAAATATCCTGTCAAAGGTGGAGATCACC...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR GCA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAAAACATTGCAGTTTTTaGAGTCTGGCATTATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEKHCSF*SLALWE Trigger: TTCCCATAATGCCAGACTGCAAAAACTGCAATGTTT...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
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| CDS-3UTR GCA 90 bp | TGGGAGTGGCAAGGGTTTTCCTCTTACACAGCCTTTAAGGTGACATTATACAAACACTTCCTTGTACTGTaGTTCATAGAAAATTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WEWQGFSSYTAFKVTLYKHFLVL*FIENSS Trigger: GCTGGAATTTTCTATGAAGCACAGTACAAGGAAGTG...TTTGTATAATGTCACCTTAAAGGCTGTGTAAGAGGAAAACCCTTGCCACTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTAAGAGATTCAAACGATaGGGATATGTAGATCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFKRFKR*GYVDLR Trigger: CCGGAGATCTACATATCCCCATCGTTTGAATCTCTT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | TGTTACACTTCAAAGCACAGTAAAAAGGTAAACGCAGACGCAAGAAAAACATTTTGGCAAAACCAAAGTTaGGGAAGGGGACAGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CYTSKHSKKVNADARKTFWQNQS*GRGQKC Trigger: GCACTTCTGTCCCCTTCCCCAACTTTGGTTTTGCCA...AAATGTTTTTCTTGCGTCTGCGTTTACCTTTTTACTGTGCTTTGAAGTGTAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTATGCTCTGGCAGTGGTaGAGTTGGGAAAGGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIMLWQW*SWERYN Trigger: GTTGTACCTTTCCCAACTCCACCACTGCCAGAGCAT...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTAGTTACTCCATGCTCTaGCAGTGGTGGAGTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEISYSML*QWWSWE Trigger: TTCCCAACTCCACCACTGCCAGAGCATGGAGTAACT...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR TCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTCAACTCAGAGGCACTTaGGGGACCATTGTCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIQLRGT*GTIVKR Trigger: TCTTTTGACAATGGTCCCTCAAGTGCCTCTGAGTTG...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTGTGTTGGTCACCGACTaGAATTTTCGATCCAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEIVLVTD*NFRSNE Trigger: TTCGTTGGATCGAAAATTCCAGTCGGTGACCAACAC...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
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| CDS-3UTR TCA 90 bp | TGTTACACTTCAAAGCACAGTAAAAAGGTAAACGCAGACGCAAGAAAAACATTTATCCACTCTCATAGTTaGCAACTGTTTCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CYTSKHSKKVNADARKTFIHSHS*QLFLLQ Trigger: CTGAAGGAGAAACAGTTGTCAACTATGAGAGTGGAT...AAATGTTTTTCTTGCGTCTGCGTTTACCTTTTTACTGTGCTTTGAAGTGTAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| CDS-3UTR CCA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTTTTGAAAGTGGTACCTaGAAAACATTGCAGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFFESGT*KTLQFL Trigger: CAAAAACTGCAATGTTTTCCAGGTACCACTTTCAAA...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
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| CDS-3UTR TCA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTTCCTTCAGTTCTATCTaGTCTTCTGATCGTTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLALHIVIISHFNLEISFSSI*SSDRLY Trigger: GTACAAACGATCAGAAGATCAGATAGAACTGAAGGA...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CCA 90 bp | TGTTACACTTCAAAGCACAGTAAAAAGGTAAACGCAGACGCAAGAAAAACATTTCAGCTTTTGGATTCGTaGATGTTTGTGATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYTSKHSKKVNADARKTFQLLDS*MFVISS Trigger: GGAAGAAATCACAAACATCCACGAATCCAAAAGCTG...AAATGTTTTTCTTGCGTCTGCGTTTACCTTTTTACTGTGCTTTGAAGTGTAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| CDS-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTCCACTGCTGCTGGTGTaGCCTCCCCCACCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLKRALLLPLPPSAGLVCPLLLV*PPPPPP Trigger: TGGAGGAGGTGGGGGAGGCAACACCAGCAGCAGTGG...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 90 bp | GCCCAGGTGCTCCAGAGGATGGGAAGGCAGGCTCAGGCTCTCTCGTaGACGGTTAAGACCAGGGCCATTGAGGTCCCTGGGTCCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AQVLQRMGRQAQALS*TVKTRAIEVPGSCE Trigger: CTCACAGGACCCAGGGACCTCAATGGCCCTGGTCTTAACCGTTCACGAGAGAGCCTGAGCCTGCCTTCCCATCCTCTGGAGCACCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GGGTGGAGGGAAAGGAACTCCGCTGTGCTCTCCTGGAGGAGGTGGTaGGCCAGCGTGGGCCAGAGATGCCTCCTTTGTAAAGGGGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GWRERNSAVLSWRRW*ASVGQRCLLCKGVR Trigger: TCGAACCCCTTTACAAAGGAGGCATCTCTGGCCCACGCTGGCCCACCACCTCCTCCAGGAGAGCACAGCGGAGTTCCTTTCCCTCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GAAAGTCTGGCCGGGGACTCCGTAAAATCATACCACTCCGGCCGATaGCGTCTCTGTGTGCGGGACTCAAGGGAAGGCCACTGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESLAGDSVKSYHSGR*RLCVRDSREGHCCW Trigger: CCAGCAGCAGTGGCCTTCCCTTGAGTCCCGCACACAGAGACGCCATCGGCCGGAGTGGTATGATTTTACGGAGTCCCCGGCCAGACTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | TTTACGGCAGAGCCTGTGGTGCTCGCAGGGGAGGCTGTGGTGCTCTaGGAAGTGACTTCACTGGCTGGCACAGGGTTCGCAGTAACACTC | + |
|
Preference number: 5 (lower is better) Translates to: FTAEPVVLAGEAVVL*EVTSLAGTGFAVTL Trigger: GAGTGTTACTGCGAACCCTGTGCCAGCCAGTGAAGTCACTTCCCAGAGCACCACAGCCTCCCCTGCGAGCACCACAGGCTCTGCCGTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 90 bp | AGTCACAGGCTCGGGTGTGGCAGACTTGTCACTCTCCATGGCCGGTaGCTGGGGTTCTTCACCTCCCATGCCCTGGAATGGAGACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHRLGCGRLVTLHGR*LGFFTSHALEWRLR Trigger: TCTGAGTCTCCATTCCAGGGCATGGGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAGCCTGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GGTTATCAGTCACAGGCTCGGGTGTGGCAGACTTGTCACTCTCCATaGCCGGTGACTGGGGTTCTTCACCTCCCATGCCCTGGAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GYQSQARVWQTCHSP*PVTGVLHLPCPGME Trigger: CTCCATTCCAGGGCATGGGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAGCCTGTGACTGATAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTGCAGCAGGGCTAGGATaGTGGGTACCAGTAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLKRALLLPLPPSAGLVCAAGLG*WVPVNP Trigger: GGGATTTACTGGTACCCACAATCCTAGCCCTGCTGC...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | CTGTCAACTGAAGTGCTAGTAGGACCACGCTGGAAGTCTGAGGCATaGCCCTCTGATGGGGCACTGGATCCCAAGCTGCTTAGGATCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSTEVLVGPRWKSEA*PSDGALDPKLLRIG Trigger: CCCGATCCTAAGCAGCTTGGGATCCAGTGCCCCATCAGAGGGCCATGCCTCAGACTTCCAGCGTGGTCCTACTAGCACTTCAGTTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | ATGTGGTGGAAATCGTGGAGGCCAGGACTTTTTCCACGCCTGATGTaGGTGGGTGGCCTGCTGGAGCGGCAAGGGTACTCTGTGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: MWWKSWRPGLFPRLM*VGGLLERQGYSVKR Trigger: TCTCTTCACAGAGTACCCTTGCCGCTCCAGCAGGCCACCCACCCACATCAGGCGTGGAAAAAGTCCTGGCCTCCACGATTTCCACCACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CAA 90 bp | GCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCTCGGGTGTGGCAGACTaGTCACTCTCCATGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGRQDQRHYQCRAPSLHVSGVAD*SLSMAG Trigger: ACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGA...GACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
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| CDS-3UTR CAA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCGCACTTGAGGGACCATaGTCAAAAGAGCTGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAALEGP*SKELPG Trigger: ACCAGGCAGCTCTTTTGACAATGGTCCCTCAAGTGC...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS GCA 90 bp | ACTTGTCACTCTCCATGGCCGGTGACTGGGGTTCTTCACCTCCCATaGCCTGGAATGGAGACTCAGAACCAGTTGGGGAAGGAGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TCHSPWPVTGVLHLP*PGMETQNQLGKEHP Trigger: TGGATGCTCCTTCCCCAACTGGTTCTGAGTCTCCATTCCAGGGCATGGGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GAGGTGGACTCTGATTCTGGCTTTGGCTTGGAGACCTCTGAGGATTaGCACACGGCAACTTCAGTAGGTGGGGCAGCAGGGCTAGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: EVDSDSGFGLETSED*HTATSVGGAAGLGL Trigger: CAATCCTAGCCCTGCTGCCCCACCTACTGAAGTTGCCGTGTGCCAATCCTCAGAGGTCTCCAAGCCAAAGCCAGAATCAGAGTCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GGAGTTCCATCGATGCTGTCAACTGAAGTGCTAGTAGGACCACGCTaGAAGTCTGAGGCATGGCCCTCTGATGGGGCACTGGATCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVPSMLSTEVLVGPR*KSEAWPSDGALDPK Trigger: CTTGGGATCCAGTGCCCCATCAGAGGGCCATGCCTCAGACTTCCAGCGTGGTCCTACTAGCACTTCAGTTGACAGCATCGATGGAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GTTCCATGTCTTCCACATCACGGTTATCAGTCACAGGCTCGGGTGTaGCAGACTTGTCACTCTCCATGGCCGGTGACTGGGGTTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPCLPHHGYQSQARV*QTCHSPWPVTGVLH Trigger: GTGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAGCCTGTGACTGATAACCGTGATGTGGAAGACATGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | TGTCTACGCTGCTGGATGTGGGCTTATCCATCATCTCATCCTGGGTaGGTGTCCCACTCCGTTCATCCCGAACAGGAGTTCCATCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: CLRCWMWAYPSSHPG*VSHSVHPEQEFHRC Trigger: GCATCGATGGAACTCCTGTTCGGGATGAACGGAGTGGGACACCCACCCAGGATGAGATGATGGATAAGCCCACATCCAGCAGCGTAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GAAATCGTGGAGGCCAGGACTTTTTCCACGCCTGATGTGGGTGGGTaGCCTGCTGGAGCGGCAAGGGTACTCTGTGAAGAGAAAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EIVEARTFSTPDVGG*PAGAARVLCEEKME Trigger: TTCCATTTTCTCTTCACAGAGTACCCTTGCCGCTCCAGCAGGCCACCCACCCACATCAGGCGTGGAAAAAGTCCTGGCCTCCACGATTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTTGCCAGATCCACATTaGCCAGGTTTGGCAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: GLKRALLLPLPPSAGLVCLPDPH*PGLAKP Trigger: TGGTTTTGCCAAACCTGGCAAATGTGGATCTGGCAA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTCTTCATTTCCAGGCTaGGAGAGGTGGACTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: GLKRALLLPLPPSAGLVCSSFPG*ERWTLI Trigger: AATCAGAGTCCACCTCTCCAAGCCTGGAAATGAAGA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CAA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTTATCATCTGAGGGCTaGCGTGAGGCGTTTTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLYSPGWPQTCPSLAPALSSEG*REAFLS Trigger: GCTTAAAAACGCCTCACGCAAGCCCTCAGATGATAA...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTCACTTGAAGTACCCTaGTTGGGTGTCTGGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLKRALLLPLPPSAGLVCSLEVP*LGVWPK Trigger: TTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 90 bp | AGCCATGGTCCCTTGAAGGAGGGAACTATGGTCCTTGGGAAAAACTaGCACAGCCCCAGTTACTCCATGCTCTGGCAGTGGTGGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHGPLKEGTMVLGKN*HSPSYSMLWQWWSW Trigger: CCAACTCCACCACTGCCAGAGCATGGAGTAACTGGGGCTGTGTCAGTTTTTCCCAAGGACCATAGTTCCCTCCTTCAAGGGACCATGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GTGGGGCACACGGTGAGGCTTTCGAGACACTTTCTGTTGACTTGGTaGGCACACCAGTGGAGACAGCAGGTTTCTCCACAGGCTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGHTVRLSRHFLLTW*AHQWRQQVSPQAFL Trigger: AAGAAAAGCCTGTGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGAAAGCCTCACCGTGTGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CCA 90 bp | GTGGGTGGCCTGCTGGAGCGGCAAGGGTACTCTGTGAAGAGAAAATaGAACGATGTGGGACTGAGTGAGGAGAGTCTGGGTATTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGGLLERQGYSVKRK*NDVGLSEESLGIVS Trigger: AGACACAATACCCAGACTCTCCTCACTCAGTCCCACATCGTTCCATTTTCTCTTCACAGAGTACCCTTGCCGCTCCAGCAGGCCACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS-3UTR CAA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCCAGGATCAGGAAGGGTaGACTTCAATTGATCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VLLYSPGWPQTCPSLAPAQDQEG*TSIDPT Trigger: AGTTGGATCAATTGAAGTCAACCCTTCCTGATCCTG...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 90 bp | TTGGTGATGGTGACCGCTCAGACCCAGGTTCATTCCCTCTTATGTTaGAGGCACCAAATAGCCCAGGGGGAGATGAGAGACGGTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVMVTAQTQVHSLLC*RHQIAQGEMRDGHS Trigger: ACTGTGACCGTCTCTCATCTCCCCCTGGGCTATTTGGTGCCTTCAACATAAGAGGGAATGAACCTGGGTCTGAGCGGTCACCATCACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 90 bp | GTCAAAAGAGCTGCCTGGTGTGCTCAGATCAAACCAACCCACTCTTaGAACCTCGCGCCCATGTCCTCTATTTCCCTTCCCAGGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: VKRAAWCAQIKPTHS*NLAPMSSISLPRNS Trigger: CGAGTTCCTGGGAAGGGAAATAGAGGACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTTGATCTGAGCACACCAGGCAGCTCTTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS GCA 90 bp | ACTCAGAGGCACTTGAGGGACCATTGTCAAAAGAGCTGCCTGGTGTaGTCAGATCAAACCAACCCACTCTTGAAACCTCGCGCCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TQRHLRDHCQKSCLV*SDQTNPLLKPRAHV Trigger: GACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTTGATCTGAGCACACCAGGCAGCTCTTTTGACAATGGTCCCTCAAGTGCCTCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS GCA 90 bp | CTTTGTAAAGGGGTTCGAAAGATCCACAGAGGGCAGATGAGTGGGTaGCTCTCGAGAGAAGATACCACCATGATCCTTAGGAGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCKGVRKIHRGQMSG*LSREDTTMILRRGR Trigger: CCTGCCCCTCCTAAGGATCATGGTGGTATCTTCTCTCGAGAGGCACCCACTCATCTGCCCTCTGTGGATCTTTCGAACCCCTTTACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 90 bp | GTGAGGCTTTCGAGACACTTTCTGTTGACTTGGTGGGCACACCAGTaGAGACAGCAGGTTTCTCCACAGGCTTTTCTTTCCGGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRLSRHFLLTWWAHQ*RQQVSPQAFLSGPP Trigger: TGGAGGACCGGAAAGAAAAGCCTGTGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGAAAGCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCCCAGGACGACAAGCCTaGAATGGATTCCATGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGRQDQRHYQCRAPSLHVPGRQA*NGFHGV Trigger: AACACCATGGAATCCATTCAAGGCTTGTCGTCCTGG...GACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCAATGGTAGACGATaGTACTGTGGTGTTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLLYSPGWPQTCPSLAPASNGRR*YCGVSC Trigger: ACAAGAAACACCACAGTACAATCGTCTACCATTGGA...GGCAGGGGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | TCCTGCTTGGCTTCCTCAGGGCTCAGGTTACAGGTGGTAGCACATCTAGTTCACTCGAGACACTTTCTGTaGACTTGGTGGGCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCLASSGLRLQVVAHLVHSRHFL*TWWAHQ Trigger: CTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGA...GTGAACTAGATGTGCTACCACCTGTAACCTGAGCCCTGAGGAAGCCAAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCAGGAGAGTCTGGGTATaGTGTCTGTGGCAACGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DKVLLYSPGWPQTCPSLARRVWV*CLWQRE Trigger: CTCACGTTGCCACAGACACAATACCCAGACTCTCCT...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS GCA 90 bp | GAACTGGATGGTAGTTTAAACGTAGTGCTTGGGAGCACCGGGCTCTaGCCAACTGACGCCTTGCTTGCTGAAGTGGAAGAGACTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELDGSLNVVLGSTGL*PTDALLAEVEETSE Trigger: TTCTGAAGTCTCTTCCACTTCAGCAAGCAAGGCGTCAGTTGGGCAGAGCCCGGTGCTCCCAAGCACTACGTTTAAACTACCATCCAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 90 bp | AACGGAGGGCCTCTAACAAAAGGTGGCCTGGGTCTCTTTAAACTGTaGAATGGGTCTCTGCCGAGAAAAGCTTCCCTAGGCCGAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NGGPLTKGGLGLFKL*NGSLPRKASLGRKS Trigger: AGACTTTCGGCCTAGGGAAGCTTTTCTCGGCAGAGACCCATTCCACAGTTTAAAGAGACCCAGGCCACCTTTTGTTAGAGGCCCTCCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTGCAACAATCTTAGATTaGAGAGCAGCTTTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GLKRALLLPLPPSAGLVCATILD*RAAFGF Trigger: GAATCCAAAAGCTGCTCTCAAATCTAAGATTGTTGC...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTAAGGAGCATCCATACTaGGAGAGGGGACTGGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SRTTGSEALPMQSTFTACKEHPY*ERGLVI Trigger: AATCACCAGTCCCCTCTCCAAGTATGGATGCTCCTT...ACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGCCTTCAATTCTTACTCTTCCTGCTTGGCTTCCTCAGGGCTCAGGTTAGAGACTCAGAACCAGTaGGGGAAGGAGCATCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: RLAFNSYSSCLASSGLRLETQNQ*GKEHPY Trigger: GTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCTC...TAACCTGAGCCCTGAGGAAGCCAAGCAGGAAGAGTAAGAATTGAAGGCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACGGAGGGAAGGCAGACTaGACCCCAAACTCTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHGGKAD*TPNSWA Trigger: GGCCCAAGAGTTTGGGGTCAAGTCTGCCTTCCCTCC...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATCCACTGCTGCTGGTGTaGCCTCCCCCACCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRESRRQGLRIDTENHQNPLLLV*PPPPPP Trigger: TGGAGGAGGTGGGGGAGGCAACACCAGCAGCAGTGG...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 90 bp | GCAAGGGTACTCTGTGAAGAGAAAATGGAACGATGTGGGACTGAGTaGGGAGAGTCTGGGTATTGTGTCTGTGGCAACGTGAGATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARVLCEEKMERCGTE*GESGYCVCGNVRCP Trigger: TGGGCATCTCACGTTGCCACAGACACAATACCCAGACTCTCCTCACTCAGTCCCACATCGTTCCATTTTCTCTTCACAGAGTACCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAAACGTGCCCTTCTCTTGCCCCTGCCTCCCAGTGCTGGACTTGTGTGTTTATCTTTTAAACACTaGAGAGTTTCTGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLKRALLLPLPPSAGLVCLSFKH*RVSVLQ Trigger: CTGCAGCACAGAAACTCTCAAGTGTTTAAAAGATAA...ACACACAAGTCCAGCACTGGGAGGCAGGGGCAAGAGAAGGGCACGTTTGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACATCGGGTGTGGCAGACTaGTCACTCTCCATGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: NTLPENLVCSVCFPDTKTSGVAD*SLSMAG Trigger: ACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGA...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTTGCCAGATCCACATTaGCCAGGTTTGGCAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: DKVLLYSPGWPQTCPSLALPDPH*PGLAKP Trigger: TGGTTTTGCCAAACCTGGCAAATGTGGATCTGGCAA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTATGCCCAACTGACGCCTaGCTTGCTGAAGTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVCPTDA*LAEVEE Trigger: CTCTTCCACTTCAGCAAGCAAGGCGTCAGTTGGGCA...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAACTGGAGGTGGCGACCTaGTACTGCTGGGTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLYHTSHKQGFWVQRGELEVAT*YCWVLR Trigger: CCTCAACACCCAGCAGTACAAGGTCGCCACCTCCAG...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCGTGGCATCAGAAAGCTaGCTTGACTTCAGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DKVLLYSPGWPQTCPSLAVASES*LDFRMD Trigger: ATCCATCCTGAAGTCAAGCAAGCTTTCTGATGCCAC...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTCAAACCAACCCACTCTaGAAACCTCGCGCCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVAGRELPSKLNQLSENPQTNPL*KPRAHV Trigger: GACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTTG...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATGGGGTGCCCGTTCCTaGTACGGCGTTGTCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAWGARS*YGVVLK Trigger: CTTTAAGACAACGCCGTACAAGGAACGGGCACCCCA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 90 bp | TTTCTATACACCAGGACGACAAGCCTTGAATGGATTCCATGGTGTTaGTCACCGACTGGAATTTTCGATCCAACGAAGACTCCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLYTRTTSLEWIPWC*SPTGIFDPTKTPGP Trigger: GGGCCCTGGAGTCTTCGTTGGATCGAAAATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
||
| CDS CCA 90 bp | TGGCACACGGCAACTTCAGTAGGTGGGGCAGCAGGGCTAGGATTGTaGGTACCAGTAAATCCCAAAGAACTGGATGGTAGTTTAAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: WHTATSVGGAAGLGL*VPVNPKELDGSLNV Trigger: TACGTTTAAACTACCATCCAGTTCTTTGGGATTTACTGGTACCCACAATCCTAGCCCTGCTGCCCCACCTACTGAAGTTGCCGTGTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | TCTCAACAGTGGAGCTACAGGCACACACAGCTAAGCCTGGTTGTTGTGTGGGTGCAGGATCAGGAAGGGTaGACTTCAATTGATCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SQQWSYRHTQLSLVVVWVQDQEG*TSIDPT Trigger: AGTTGGATCAATTGAAGTCAACCCTTCCTGATCCTG...CACCCACACAACAACCAGGCTTAGCTGTGTGTGCCTGTAGCTCCACTGTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGTACAGTCCCACATTTGCCAGGTTaGGCAAAACCAAAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DEIQCFCLSFCTCVCSTVPHLPG*AKPKLG Trigger: CCCCAACTTTGGTTTTGCCAAACCTGGCAAATGTGG...GACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | ACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCTATGGTTGCCAGATCCACATTaGCCAGGTTTGGCAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TTGSEALPMQSTFTACLWLPDPH*PGLAKP Trigger: TGGTTTTGCCAAACCTGGCAAATGTGGATCTGGCAA...CCATAGACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTCATTCCCTCTTATGTaGAAGGCACCAAATAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DKVLLYSPGWPQTCPSLASFPLM*KAPNSP Trigger: TGGGCTATTTGGTGCCTTCAACATAAGAGGGAATGA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTAGGAGAGTCTGGGTATaGTGTCTGTGGCAACGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVAGRELPSKLNQLSENPRRVWV*CLWQRE Trigger: CTCACGTTGCCACAGACACAATACCCAGACTCTCCT...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACCAAACCAACCCACTCTaGAAACCTCGCGCCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHQTNPL*KPRAHV Trigger: GACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTTG...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGCTGGCAGTGGTGGAGTaGGGAAAGGTACAACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMLAVVE*GKVQPQ Trigger: CTGGGGTTGTACCTTTCCCAACTCCACCACTGCCAG...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCCTCAGCCATGGTCCCTaGAAGGAGGGAACTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HEVMISCIFVRRPIGQKGLSHGP*KEGTMV Trigger: GACCATAGTTCCCTCCTTCAAGGGACCATGGCTGAG...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTTAAGACCAGGGCCATaGAGGTCCCTGGGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMLRPGP*RSLGPV Trigger: CACAGGACCCAGGGACCTCAATGGCCCTGGTCTTAA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 90 bp | TTTAGAAAGAGCAGAGAGAATGCTCTCTGGGGTGATCTCCACCTTTaGCAGGATATTTGCCAGAGGGTTGTGAGATGGTGTTGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRKSRENALWGDLHL*QDICQRVVRWCCGR Trigger: CCTGCCACAACACCATCTCACAACCCTCTGGCAAATATCCTGTCAAAGGTGGAGATCACCCCAGAGAGCATTCTCTCTGCTCTTTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 90 bp | AATGTTGAGTTGAAACTGTTGGAACGAAAGCTGGTGACACTCTCCTaGAACTGGGGTGCCCGTTCCTTGTACGGCGTTGTCTTAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVELKLLERKLVTLS*NWGARSLYGVVLKP Trigger: TGGCTTTAAGACAACGCCGTACAAGGAACGGGCACCCCAGTTTCAGGAGAGTGTCACCAGCTTTCGTTCCAACAGTTTCAACTCAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 90 bp | TACCTTTCAAGAAGTTGTGGATCTTCATTTCCAGGCTTGGAGAGGTaGACTCTGATTCTGGCTTTGGCTTGGAGACCTCTGAGGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSRSCGSSFPGLER*TLILALAWRPLRIG Trigger: GCCAATCCTCAGAGGTCTCCAAGCCAAAGCCAGAATCAGAGTCCACCTCTCCAAGCCTGGAAATGAAGATCCACAACTTCTTGAAAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCTCCCCAGTATCTACCAGTGGGTACTCACTCTCAACAGTGGAGCTACAATGGATTCCATGGTGTaGGTCACCGACTGGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPSIYQWVLTLNSGATMDSMV*VTDWNF Trigger: AAAATTCCAGTCGGTGACCAACACCATGGAATCCAT...TGTAGCTCCACTGTTGAGAGTGAGTACCCACTGGTAGATACTGGGGAGAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACACTCTGATTCTGGCTTaGGCTTGGAGACCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHTLILA*AWRPLR Trigger: CCTCAGAGGTCTCCAAGCCAAAGCCAGAATCAGAGT...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCTGGAGGTGGCGACCTaGTACTGCTGGGTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFLEVAT*YCWVLR Trigger: CCTCAACACCCAGCAGTACAAGGTCGCCACCTCCAG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGGAGGGAAGGCAGACTaGACCCCAAACTCTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFGGKAD*TPNSWA Trigger: GGCCCAAGAGTTTGGGGTCAAGTCTGCCTTCCCTCC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGACAAGCCACTGTGGTaGGAGTCAGGGGTGAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVAGRELPSKLNQLSENPDKPLW*ESGVKN Trigger: ATTTTTCACCCCTGACTCCAACCACAGTGGCTTGTC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACGCACTTGAGGGACCATaGTCAAAAGAGCTGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHALEGP*SKELPG Trigger: ACCAGGCAGCTCTTTTGACAATGGTCCCTCAAGTGC...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATCTGGCAGTGGTGGAGTaGGGAAAGGTACAACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VRESRRQGLRIDTENHQNLAVVE*GKVQPQ Trigger: CTGGGGTTGTACCTTTCCCAACTCCACCACTGCCAG...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACCCAGGACGACAAGCCTaGAATGGATTCCATGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHPGRQA*NGFHGV Trigger: AACACCATGGAATCCATTCAAGGCTTGTCGTCCTGG...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGCCTTCAATTCTTACTCTTCCTGCTTGGCTTCCTCAGGGCTCAGGTTATCCAATGGTAGACGATaGTACTGTGGTGTTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLAFNSYSSCLASSGLRLSNGRR*YCGVSC Trigger: ACAAGAAACACCACAGTACAATCGTCTACCATTGGA...TAACCTGAGCCCTGAGGAAGCCAAGCAGGAAGAGTAAGAATTGAAGGCCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGGACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTGCTTCTTCAAATTCTTaGGAGAACTTCTTTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SRTTGSEALPMQSTFTACASSNS*ENFFPP Trigger: AGGTGGAAAGAAGTTCTCCAAAGAATTTGAAGAAGC...ACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGTCCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGAGACTCAGAACCAGTaGGGGAAGGAGCATCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: NTLPENLVCSVCFPDTKTETQNQ*GKEHPY Trigger: GTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCTC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATCGAGACACTTTCTGTaGACTTGGTGGGCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLYHTSHKQGFWVQRGESRHFL*TWWAHQ Trigger: CTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTACCTTTGACAGGATATTaGCCAGAGGGTTGTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVPLTGY*PEGCEM Trigger: CATCTCACAACCCTCTGGCAAATATCCTGTCAAAGG...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCAGTGGCATCAGAAAGCTaGCTTGACTTCAGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AHDTFLGVKPSSDDTRKAVASES*LDFRMD Trigger: ATCCATCCTGAAGTCAAGCAAGCTTTCTGATGCCAC...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATTATCATCTGAGGGCTaGCGTGAGGCGTTTTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHDTFLGVKPSSDDTRKALSSEG*REAFLS Trigger: GCTTAAAAACGCCTCACGCAAGCCCTCAGATGATAA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACCTTGAAGTACCCTTGTaGGGTGTCTGGCCAAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHLEVPL*GVWPKC Trigger: GCATTTTGGCCAGACACCCAACAAGGGTACTTCAAG...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGGTGTTCTTCCTGTTGTaGGTCAGTGGTGGGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMVFFLL*VSGGQA Trigger: AGCTTGCCCACCACTGACCAACAACAGGAAGAACAC...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATTGGGGTGCCCGTTCCTaGTACGGCGTTGTCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRESRRQGLRIDTENHQNWGARS*YGVVLK Trigger: CTTTAAGACAACGCCGTACAAGGAACGGGCACCCCA...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCAGGGAACTATGGTCCTaGGGAAAAACTGACACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HEVMISCIFVRRPIGQKGRELWS*GKTDTA Trigger: GGCTGTGTCAGTTTTTCCCAAGGACCATAGTTCCCT...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTTTAAGACCAGGGCCATaGAGGTCCCTGGGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFLRPGP*RSLGPV Trigger: CACAGGACCCAGGGACCTCAATGGCCCTGGTCTTAA...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS GCA 90 bp | CTGACACCATCACTTGAAGTACCCTTGTTGGGTGTCTGGCCAAAATaGTTATCATCTGAGGGCTTGCGTGAGGCGTTTTTAAGCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: LTPSLEVPLLGVWPK*LSSEGLREAFLSIF Trigger: GAATATGCTTAAAAACGCCTCACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGATGGTGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 90 bp | TTTGAGAGACTGACACCATCACTTGAAGTACCCTTGTTGGGTGTCTaGCCAAAATGCTTATCATCTGAGGGCTTGCGTGAGGCGTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FERLTPSLEVPLLGV*PKCLSSEGLREAFL Trigger: TAAAAACGCCTCACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGATGGTGTCAGTCTCTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAATGGATTCCATGGTGTaGGTCACCGACTGGAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVMDSMV*VTDWNF Trigger: AAAATTCCAGTCGGTGACCAACACCATGGAATCCAT...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGCTTGGCTTCCTCAGGGCTCAGGTTACAGGTGGTAGCACATCTAGTTCACTGCTTATTCGGTTGTTaGTTCAGATTTTCTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLASSGLRLQVVAHLVHCLFGC*FRFSFS Trigger: GCTGAAAGAAAATCTGAACAAACAACCGAATAAGCA...GTGAACTAGATGTGCTACCACCTGTAACCTGAGCCCTGAGGAAGCCAAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GATAAAGTTCTACTCTATAGCCCGGGCTGGCCTCAAACGTGCCCTTCTCTTGCCTTATCTTTTAAACACTaGAGAGTTTCTGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DKVLLYSPGWPQTCPSLALSFKH*RVSVLQ Trigger: CTGCAGCACAGAAACTCTCAAGTGTTTAAAAGATAA...GGCAAGAGAAGGGCACGTTTGAGGCCAGCCCGGGCTATAGAGTAGAACTTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAAAGGAGCATCCATACTaGGAGAGGGGACTGGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEKEHPY*ERGLVI Trigger: AATCACCAGTCCCCTCTCCAAGTATGGATGCTCCTT...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATGAGACTCAGAACCAGTaGGGGAAGGAGCATCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: VRESRRQGLRIDTENHQNETQNQ*GKEHPY Trigger: GTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCTC...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATTCGAGACACTTTCTGTaGACTTGGTGGGCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VRESRRQGLRIDTENHQNSRHFL*TWWAHQ Trigger: CTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGA...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAACCACATTTGCCAGGTTaGGCAAAACCAAAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEPHLPG*AKPKLG Trigger: CCCCAACTTTGGTTTTGCCAAACCTGGCAAATGTGG...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGCCACATTTGCCAGGTTaGGCAAAACCAAAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMPHLPG*AKPKLG Trigger: CCCCAACTTTGGTTTTGCCAAACCTGGCAAATGTGG...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTTGCCCAACTGACGCCTaGCTTGCTGAAGTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFCPTDA*LAEVEE Trigger: CTCTTCCACTTCAGCAAGCAAGGCGTCAGTTGGGCA...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGCAGCAGGGCTAGGATaGTGGGTACCAGTAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFAAGLG*WVPVNP Trigger: GGGATTTACTGGTACCCACAATCCTAGCCCTGCTGC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTACATCAGAAAGCTTGCTaGACTTCAGGATGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVHQKAC*TSGWIW Trigger: CCAAATCCATCCTGAAGTCAAGCAAGCTTTCTGATG...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCAGGGTCCTATGTGACACAGCACCACTGTGGTACTTCTGTGTGGTAATGCATCATTTTTACTaGGTGATGGTGACCGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSFRVLCDTAPLWYFCVVMHHFY*VMVTAQ Trigger: CTGAGCGGTCACCATCACCAAGTAAAAATGATGCAT...TACCACACAGAAGTACCACAGTGGTGCTGTGTCACATAGGACCCTGAAGGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGTTGAGTTGAAACTGTaGGAACGAAAGCTGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RVAGRELPSKLNQLSENPVELKL*ERKLVT Trigger: TGTCACCAGCTTTCGTTCCAACAGTTTCAACTCAAC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTCTCAGCCATGGTCCCTaGAAGGAGGGAACTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFLSHGP*KEGTMV Trigger: GACCATAGTTCCCTCCTTCAAGGGACCATGGCTGAG...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 90 bp | GTACTGTGGTGTTTCTTGTTTTCTATACACCAGGACGACAAGCCTTaGATGGATTCCATGGTGTTGGTCACCGACTGGAATTTTCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VLWCFLFSIHQDDKP*MDSMVLVTDWNFRS Trigger: GGATCGAAAATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAGAAAACAAGAAACACCACAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
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| CDS CCA 90 bp | TCTTGTTTTCTATACACCAGGACGACAAGCCTTGAATGGATTCCATaGTGTTGGTCACCGACTGGAATTTTCGATCCAACGAAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCFLYTRTTSLEWIP*CWSPTGIFDPTKTP Trigger: TGGAGTCTTCGTTGGATCGAAAATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAGAAAACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
||
| CDS CCA 90 bp | TGTGGTGTTTCTTGTTTTCTATACACCAGGACGACAAGCCTTGAATaGATTCCATGGTGTTGGTCACCGACTGGAATTTTCGATCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: CGVSCFLYTRTTSLE*IPWCWSPTGIFDPT Trigger: CGTTGGATCGAAAATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAGAAAACAAGAAACACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
||
| CDS CCA 90 bp | TTGACTTCAGGATGGATTTGGCTGGTTTCTTCTCTAGATTCATCATaGCAGATGGAGGAGGCCCTGAATACTCAAAATCTCGGTAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSGWIWLVSSLDSS*QMEEALNTQNLGSP Trigger: AGGACTACCGAGATTTTGAGTATTCAGGGCCTCCTCCATCTGCCATGATGAATCTAGAGAAGAAACCAGCCAAATCCATCCTGAAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGGGTACCTGGAAAACATaGCAGTTTTTGCAGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMGTWKT*QFLQSG Trigger: GCCAGACTGCAAAAACTGCAATGTTTTCCAGGTACC...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCTCCCCAGTATCTACCAGTGGGTACTCACTCTCAACAGTGGAGCTACACCACTGCTTATTCGGTaGTTTGTTCAGATTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPSIYQWVLTLNSGATPLLIR*FVQIFF Trigger: AAAGAAAATCTGAACAAACAACCGAATAAGCAGTGG...TGTAGCTCCACTGTTGAGAGTGAGTACCCACTGGTAGATACTGGGGAGAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | GATGAGATACAATGCTTCTGTCTGTCCTTCTGCACCTGCGTGTGCAGTACAGTCGCAACAATCTTAGATTaGAGAGCAGCTTTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: DEIQCFCLSFCTCVCSTVATILD*RAAFGF Trigger: GAATCCAAAAGCTGCTCTCAAATCTAAGATTGTTGC...GACTGTACTGCACACGCAGGTGCAGAAGGACAGACAGAAGCATTGTATCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGCCTTCAATTCTTACTCTTCCTGCTTGGCTTCCTCAGGGCTCAGGTTATTATCTTTTAAACACTaGAGAGTTTCTGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLAFNSYSSCLASSGLRLLSFKH*RVSVLQ Trigger: CTGCAGCACAGAAACTCTCAAGTGTTTAAAAGATAA...TAACCTGAGCCCTGAGGAAGCCAAGCAGGAAGAGTAAGAATTGAAGGCCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTCCTCTAGCTTGGAACTaGCTTCTTCAAATTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVAGRELPSKLNQLSENPPLAWN*LLQILW Trigger: CCAAAGAATTTGAAGAAGCAAGTTCCAAGCTAGAGG...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | ACGACAGGATCAGAGGCACTACCAATGCAGAGCACCTTCACTGCATGTCTATGGAACTTCTTCTTTAAGTaGTTTACTCGGTTAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTGSEALPMQSTFTACLWNFFFK*FTRLAK Trigger: CTTCGCTAACCGAGTAAACAACTTAAAGAAGAAGTT...CCATAGACATGCAGTGAAGGTGCTCTGCATTGGTAGTGCCTCTGATCCTGTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCCAGGATCAGGAAGGGTaGACTTCAATTGATCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: HEVMISCIFVRRPIGQKGQDQEG*TSIDPT Trigger: AGTTGGATCAATTGAAGTCAACCCTTCCTGATCCTG...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACCTTTGACAGGATATTaGCCAGAGGGTTGTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NTLPENLVCSVCFPDTKTPLTGY*PEGCEM Trigger: CATCTCACAACCCTCTGGCAAATATCCTGTCAAAGG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATCTTCATTTCCAGGCTaGGAGAGGTGGACTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SLLYHTSHKQGFWVQRGESSFPG*ERWTLI Trigger: AATCAGAGTCCACCTCTCCAAGCCTGGAAATGAAGA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACATGCATCATTTTTACTaGGTGATGGTGACCGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHMHHFY*VMVTAQ Trigger: CTGAGCGGTCACCATCACCAAGTAAAAATGATGCAT...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATCTTGAAGTACCCTTGTaGGGTGTCTGGCCAAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VRESRRQGLRIDTENHQNLEVPL*GVWPKC Trigger: GCATTTTGGCCAGACACCCAACAAGGGTACTTCAAG...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAATCACTTGAAGTACCCTaGTTGGGTGTCTGGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLYHTSHKQGFWVQRGESLEVP*LGVWPK Trigger: TTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGA...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CACGAGGTCATGATATCATGCATTTTTGTGAGGAGACCTATAGGGCAGAAAGGCGTACTGTGGTGTTTCTaGTTTTCTATACACCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HEVMISCIFVRRPIGQKGVLWCF*FSIHQD Trigger: GTCCTGGTGTATAGAAAACAAGAAACACCACAGTAC...GCCTTTCTGCCCTATAGGTCTCCTCACAAAAATGCATGATATCATGACCTCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGCTATGCTTTTGAAGACAGTTATCCTGCTTCAACATTTCAGAAACCACTCCAATGGTAGACGATaGTACTGTGGTGTTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAAMLLKTVILLQHFRNHSNGRR*YCGVSC Trigger: ACAAGAAACACCACAGTACAATCGTCTACCATTGGA...GTGGTTTCTGAAATGTTGAAGCAGGATAACTGTCTTCAAAAGCATAGCGGCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGCAGGGAGGGAGCTCCCATCTAAGCTGAATCAACTCTCAGAAAATCCTGCTTCTTCAAATTCTTaGGAGAACTTCTTTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RVAGRELPSKLNQLSENPASSNS*ENFFPP Trigger: AGGTGGAAAGAAGTTCTCCAAAGAATTTGAAGAAGC...AGGATTTTCTGAGAGTTGATTCAGCTTAGATGGGAGCTCCCTCCCTGCAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CTGGAGACCAAAATGACACCGTGTGCCTTCCTCTGTCACTATCTAATTTTGGGACCTCTAGCTTGGAACTaGCTTCTTCAAATTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LETKMTPCAFLCHYLILGPLAWN*LLQILW Trigger: CCAAAGAATTTGAAGAAGCAAGTTCCAAGCTAGAGG...TCCCAAAATTAGATAGTGACAGAGGAAGGCACACGGTGTCATTTTGGTCTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197449.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTCATTCCCTCTTATGTaGAAGGCACCAAATAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMSFPLM*KAPNSP Trigger: TGGGCTATTTGGTGCCTTCAACATAAGAGGGAATGA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTGACAAGCCACTGTGGTaGGAGTCAGGGGTGAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFDKPLW*ESGVKN Trigger: ATTTTTCACCCCTGACTCCAACCACAGTGGCTTGTC...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGTTGAGTTGAAACTGTaGGAACGAAAGCTGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: NTLPENLVCSVCFPDTKTVELKL*ERKLVT Trigger: TGTCACCAGCTTTCGTTCCAACAGTTTCAACTCAAC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GCTCATGATACCTTCCTAGGAGTCAAACCAAGTTCTGATGACACCAGGAAGGCATGCTCAAATGTTGAGTaGAAACTGTTGGAACGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AHDTFLGVKPSSDDTRKACSNVE*KLLERK Trigger: CTTTCGTTCCAACAGTTTCAACTCAACATTTGAGCA...TGCCTTCCTGGTGTCATCAGAACTTGGTTTGACTCCTAGGAAGGTATCATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 90 bp | TTTAAGTTTAAGCCACTGAAACCAGGATTACCTTTCAAGAAGTTGTaGATCTTCATTTCCAGGCTTGGAGAGGTGGACTCTGATTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FKFKPLKPGLPFKKL*IFISRLGEVDSDSG Trigger: GCCAGAATCAGAGTCCACCTCTCCAAGCCTGGAAATGAAGATCCACAACTTCTTGAAAGGTAATCCTGGTTTCAGTGGCTTAAACTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACCTCTAGCTTGGAACTaGCTTCTTCAAATTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTLPENLVCSVCFPDTKTPLAWN*LLQILW Trigger: CCAAAGAATTTGAAGAAGCAAGTTCCAAGCTAGAGG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGAAAGCAGGAGACAAGGGCTTAGAATAGATACGGAGAACCATCAAAATCATCAGAAAGCTTGCTaGACTTCAGGATGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRESRRQGLRIDTENHQNHQKAC*TSGWIW Trigger: CCAAATCCATCCTGAAGTCAAGCAAGCTTTCTGATG...ATTTTGATGGTTCTCCGTATCTATTCTAAGCCCTTGTCTCCTGCTTTCCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 90 bp | ACATCCACTCTCATAGTTGACAACTGTTTCTCCTTCAGTTCTATCTaGTCTTCTGATCGTTTGTACATCAGCAACTCTTCAATGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSTLIVDNCFSFSSI*SSDRLYISNSSMRA Trigger: GGCCCTCATTGAAGAGTTGCTGATGTACAAACGATCAGAAGATCAGATAGAACTGAAGGAGAAACAGTTGTCAACTATGAGAGTGGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS TCA 90 bp | TGGATCCCAAGCTGCTTAGGATCGGGATGTTTAAGTTTAAGCCACTaGAACCAGGATTACCTTTCAAGAAGTTGTGGATCTTCATTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WIPSCLGSGCLSLSH*NQDYLSRSCGSSFP Trigger: TGGAAATGAAGATCCACAACTTCTTGAAAGGTAATCCTGGTTTCAGTGGCTTAAACTTAAACATCCCGATCCTAAGCAGCTTGGGATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACAGCAACAATCTTAGATTaGAGAGCAGCTTTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: NTLPENLVCSVCFPDTKTATILD*RAAFGF Trigger: GAATCCAAAAGCTGCTCTCAAATCTAAGATTGTTGC...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTACCACACTTCTCATAAACAAGGTTTCTGGGTTCAGAGAGGAGAAGCTTCTTCAAATTCTTaGGAGAACTTCTTTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLYHTSHKQGFWVQRGEASSNS*ENFFPP Trigger: AGGTGGAAAGAAGTTCTCCAAAGAATTTGAAGAAGC...TTCTCCTCTCTGAACCCAGAAACCTTGTTTATGAGAAGTGTGGTACAGCAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGAAACATTCCAAGATCCACGATTGTCTTCCCCTTAGGGATTCGATGTGCTTATTCGGTTGTTaGTTCAGATTTTCTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRQKHSKIHDCLPLRDSMCLFGC*FRFSFS Trigger: GCTGAAAGAAAATCTGAACAAACAACCGAATAAGCA...CATCGAATCCCTAAGGGGAAGACAATCGTGGATCTTGGAATGTTTCTGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CAA 90 bp | AACACACTACCAGAAAACCTAGTGTGCAGTGTCTGCTTCCCAGATACAAAGACACCACTGCTTATTCGGTaGTTTGTTCAGATTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTLPENLVCSVCFPDTKTPLLIR*FVQIFF Trigger: AAAGAAAATCTGAACAAACAACCGAATAAGCAGTGG...TGTCTTTGTATCTGGGAAGCAGACACTGCACACTAGGTTTTCTGGTAGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090791.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTAAGGAGCATCCATACTaGGAGAGGGGACTGGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: GLSLALHIVIISHFNLEIKEHPY*ERGLVI Trigger: AATCACCAGTCCCCTCTCCAAGTATGGATGCTCCTT...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | CCACTGTGGTACTTCTGTGTGGTACTAGAGTATTCATGGAACTCTTTGTGTTTTAACTTCTTCTTTAAGTaGTTTACTCGGTTAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLWYFCVVLEYSWNSLCFNFFFK*FTRLAK Trigger: CTTCGCTAACCGAGTAAACAACTTAAAGAAGAAGTT...AAAACACAAAGAGTTCCATGAATACTCTAGTACCACACAGAAGTACCACAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTTGCTCAAATGTTGAGTaGAAACTGTTGGAACGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLSLALHIVIISHFNLEICSNVE*KLLERK Trigger: CTTTCGTTCCAACAGTTTCAACTCAACATTTGAGCA...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTCCCTAGCTTTACATATTGTGATCATTTCCCATTTTAACCTTGAAATTAACTTCTTCTTTAAGTaGTTTACTCGGTTAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLSLALHIVIISHFNLEINFFFK*FTRLAK Trigger: CTTCGCTAACCGAGTAAACAACTTAAAGAAGAAGTT...AATTTCAAGGTTAAAATGGGAAATGATCACAATATGTAAAGCTAGGGACAGACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | TGCTCAGAGGCTTCGGGAGAGGTGGAGCTGCCGTCGTaGGCACAGACGGTGGGGCACACGGTGAGGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: CSEASGEVELPS*AQTVGHTVRLS Trigger: CGAAAGCCTCACCGTGTGCCCCACCGTCTGTGCCCACGACGGCAGCTCCACCTCTCCCGAAGCCTCTGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS GCA 72 bp | TGGCGTCTCTGTGTGCGGGACTCAAGGGAAGGCCACTaGTGCTGGTGTTGCCTCCCCCACCTCCTCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WRLCVRDSREGH*CWCCLPHLLQG Trigger: CCCTTGGAGGAGGTGGGGGAGGCAACACCAGCAGCAGTGGCCTTCCCTTGAGTCCCGCACACAGAGACGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | GGACAGAAGTGCAGTGCTCAGAGGCTTCGGGAGAGGTaGAGCTGCCGTCGTGGGCACAGACGGTGGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: GQKCSAQRLRER*SCRRGHRRWGT Trigger: TGTGCCCCACCGTCTGTGCCCACGACGGCAGCTCCACCTCTCCCGAAGCCTCTGAGCACTGCACTTCTGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | GCCGGGGACTCCGTAAAATCATACCACTCCGGCCGATaGCGTCTCTGTGTGCGGGACTCAAGGGAAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGDSVKSYHSGR*RLCVRDSREGH Trigger: GTGGCCTTCCCTTGAGTCCCGCACACAGAGACGCCATCGGCCGGAGTGGTATGATTTTACGGAGTCCCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 72 bp | CTCGGGTGTGGCAGACTTGTCACTCTCCATGGCCGGTaGCTGGGGTTCTTCACCTCCCATGCCCTGGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: LGCGRLVTLHGR*LGFFTSHALEW Trigger: CCATTCCAGGGCATGGGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | TCACAGGCTCGGGTGTGGCAGACTTGTCACTCTCCATaGCCGGTGACTGGGGTTCTTCACCTCCCATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQARVWQTCHSP*PVTGVLHLPCP Trigger: AGGGCATGGGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAGCCTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | TGGAGAGTAGATTTCTCCCCTTTACGGCAGAGCCTGTaGTGCTCGCAGGGGAGGCTGTGGTGCTCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WRVDFSPLRQSL*CSQGRLWCSGK Trigger: CTTCCCAGAGCACCACAGCCTCCCCTGCGAGCACCACAGGCTCTGCCGTAAAGGGGAGAAATCTACTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | AAATCGTGGAGGCCAGGACTTTTTCCACGCCTGATGTaGGTGGGTGGCCTGCTGGAGCGGCAAGGGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: KSWRPGLFPRLM*VGGLLERQGYS Trigger: AGAGTACCCTTGCCGCTCCAGCAGGCCACCCACCCACATCAGGCGTGGAAAAAGTCCTGGCCTCCACGATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | GAAAGGAACTCCGCTGTGCTCTCCTGGAGGAGGTGGTaGGCCAGCGTGGGCCAGAGATGCCTCCTTTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ERNSAVLSWRRW*ASVGQRCLLCK Trigger: TTTACAAAGGAGGCATCTCTGGCCCACGCTGGCCCACCACCTCCTCCAGGAGAGCACAGCGGAGTTCCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS GCA 72 bp | TCTCCATGGCCGGTGACTGGGGTTCTTCACCTCCCATaGCCTGGAATGGAGACTCAGAACCAGTTGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPWPVTGVLHLP*PGMETQNQLGK Trigger: CTTCCCCAACTGGTTCTGAGTCTCCATTCCAGGGCATGGGAGGTGAAGAACCCCAGTCACCGGCCATGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | CTTCCACATCACGGTTATCAGTCACAGGCTCGGGTGTaGCAGACTTGTCACTCTCCATGGCCGGTGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPHHGYQSQARV*QTCHSPWPVTG Trigger: CCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAGCCTGTGACTGATAACCGTGATGTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | GAAGTGCTAGTAGGACCACGCTGGAAGTCTGAGGCATaGCCCTCTGATGGGGCACTGGATCCCAAGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EVLVGPRWKSEA*PSDGALDPKLL Trigger: AAGCAGCTTGGGATCCAGTGCCCCATCAGAGGGCCATGCCTCAGACTTCCAGCGTGGTCCTACTAGCACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | AGCCCCAGTTACTCCATGCTCTGGCAGTGGTGGAGTTaGGAAAGGTACAACCCCAGAGTGGTCAACAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPSYSMLWQWWS*ERYNPRVVNRG Trigger: CCCCCTGTTGACCACTCTGGGGTTGTACCTTTCCCAACTCCACCACTGCCAGAGCATGGAGTAACTGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CAA 72 bp | CAGCCCCAGTTACTCCATGCTCTGGCAGTGGTGGAGTaGGGAAAGGTACAACCCCAGAGTGGTCAACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QPQLLHALAVVE*GKVQPQSGQQG Trigger: CCCCTGTTGACCACTCTGGGGTTGTACCTTTCCCAACTCCACCACTGCCAGAGCATGGAGTAACTGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CAA 90 bp | TCTTCCACATCACGGTTATCAGTCACAGGCTCGGGTGTGGCAGACTaGTCACTCTCCATGGCCGGTGACTGGGGTTCTTCACCTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSTSRLSVTGSGVAD*SLSMAGDWGSSPPM Trigger: CATGGGAGGTGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAGCCTGTGACTGATAACCGTGATGTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | ACCTCCCATGCCCTGGAATGGAGACTCAGAACCAGTTaGGGAAGGAGCATCCATACTTGGAGAGGGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSHALEWRLRTS*GRSIHTWRGDW Trigger: CCAGTCCCCTCTCCAAGTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCTCCATTCCAGGGCATGGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CCA 72 bp | TCGATGCTGTCAACTGAAGTGCTAGTAGGACCACGCTaGAAGTCTGAGGCATGGCCCTCTGATGGGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SMLSTEVLVGPR*KSEAWPSDGAL Trigger: CAGTGCCCCATCAGAGGGCCATGCCTCAGACTTCCAGCGTGGTCCTACTAGCACTTCAGTTGACAGCATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CAA 72 bp | CACCTCCCATGCCCTGGAATGGAGACTCAGAACCAGTaGGGGAAGGAGCATCCATACTTGGAGAGGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: HLPCPGMETQNQ*GKEHPYLERGL Trigger: CAGTCCCCTCTCCAAGTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCTCCATTCCAGGGCATGGGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CAA 72 bp | TCACGGTTATCAGTCACAGGCTCGGGTGTGGCAGACTaGTCACTCTCCATGGCCGGTGACTGGGGTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRLSVTGSGVAD*SLSMAGDWGSS Trigger: TGAAGAACCCCAGTCACCGGCCATGGAGAGTGACAAGTCTGCCACACCCGAGCCTGTGACTGATAACCGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS TCA 72 bp | TCTTCCTGGAGGTGGCGACCTTGTACTGCTGGGTGTTaGGGAACCAGGGCTGATGATCTTAGACAGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSWRWRPCTAGC*GTRADDLRQQG Trigger: TCCCTGCTGTCTAAGATCATCAGCCCTGGTTCCTCAACACCCAGCAGTACAAGGTCGCCACCTCCAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS TCA 72 bp | GCTGCCTGGTGTGCTCAGATCAAACCAACCCACTCTTaGAACCTCGCGCCCATGTCCTCTATTTCCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AAWCAQIKPTHS*NLAPMSSISLP Trigger: GGGAAGGGAAATAGAGGACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTTGATCTGAGCACACCAGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS GCA 72 bp | ATTTGCCAGAGGGTTGTGAGATGGTGTTGTGGCAGGTaGAGGTGTTTTCAGGCCACTGCTGAGGTTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ICQRVVRWCCGR*RCFQATAEVAG Trigger: CCCAGCAACCTCAGCAGTGGCCTGAAAACACCTGCACCTGCCACAACACCATCTCACAACCCTCTGGCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS GCA 72 bp | GGTAGTTTAAACGTAGTGCTTGGGAGCACCGGGCTCTaGCCAACTGACGCCTTGCTTGCTGAAGTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSLNVVLGSTGL*PTDALLAEVEE Trigger: CTCTTCCACTTCAGCAAGCAAGGCGTCAGTTGGGCAGAGCCCGGTGCTCCCAAGCACTACGTTTAAACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
||
| CDS CAA 72 bp | GCACACGGTGAGGCTTTCGAGACACTTTCTGTTGACTaGGTGGGCACACCAGTGGAGACAGCAGGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AHGEAFETLSVD*VGTPVETAGFS Trigger: GGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGAAAGCCTCACCGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
||
| CDS CAA 90 bp | CTTGGTGATGGTGACCGCTCAGACCCAGGTTCATTCCCTCTTATGTaGAAGGCACCAAATAGCCCAGGGGGAGATGAGAGACGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LGDGDRSDPGSFPLM*KAPNSPGGDERRSQ Trigger: CTGTGACCGTCTCTCATCTCCCCCTGGGCTATTTGGTGCCTTCAACATAAGAGGGAATGAACCTGGGTCTGAGCGGTCACCATCACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 72 bp | GTGACCGCTCAGACCCAGGTTCATTCCCTCTTATGTTaGAGGCACCAAATAGCCCAGGGGGAGATGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VTAQTQVHSLLC*RHQIAQGEMRD Trigger: GTCTCTCATCTCCCCCTGGGCTATTTGGTGCCTTCAACATAAGAGGGAATGAACCTGGGTCTGAGCGGTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 72 bp | TGTGTCTGTGGCAACGTGAGATGCCCAGCAGTAGACTaGGACAAGCCACTGTGGTTGGAGTCAGGGGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: CVCGNVRCPAVD*DKPLWLESGVK Trigger: TTTCACCCCTGACTCCAACCACAGTGGCTTGTCTCAGTCTACTGCTGGGCATCTCACGTTGCCACAGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 72 bp | CCCTTGAAGGAGGGAACTATGGTCCTTGGGAAAAACTaGCACAGCCCCAGTTACTCCATGCTCTGGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLKEGTMVLGKN*HSPSYSMLWQW Trigger: CCACTGCCAGAGCATGGAGTAACTGGGGCTGTGTCAGTTTTTCCCAAGGACCATAGTTCCCTCCTTCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS GCA 72 bp | GGAACGAAAGCTGGTGACACTCTCCTGAAACTGGGGTaGCCGTTCCTTGTACGGCGTTGTCTTAAAGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GTKAGDTLLKLG*PFLVRRCLKAS Trigger: ACTGGCTTTAAGACAACGCCGTACAAGGAACGGGCACCCCAGTTTCAGGAGAGTGTCACCAGCTTTCGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS GCA 72 bp | GGGGTTCGAAAGATCCACAGAGGGCAGATGAGTGGGTaGCTCTCGAGAGAAGATACCACCATGATCCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVRKIHRGQMSG*LSREDTTMILR Trigger: CCTAAGGATCATGGTGGTATCTTCTCTCGAGAGGCACCCACTCATCTGCCCTCTGTGGATCTTTCGAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | ACGGTGAGGCTTTCGAGACACTTTCTGTTGACTTGGTaGGCACACCAGTGGAGACAGCAGGTTTCTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TVRLSRHFLLTW*AHQWRQQVSPQ Trigger: CTGTGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGAAAGCCTCACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | CACACGGTGAGGCTTTCGAGACACTTTCTGTTGACTTaGTGGGCACACCAGTGGAGACAGCAGGTTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HTVRLSRHFLLT*WAHQWRQQVSP Trigger: TGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGAAAGCCTCACCGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | CTGCTGGAGCGGCAAGGGTACTCTGTGAAGAGAAAATaGAACGATGTGGGACTGAGTGAGGAGAGTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLERQGYSVKRK*NDVGLSEESLG Trigger: ACCCAGACTCTCCTCACTCAGTCCCACATCGTTCCATTTTCTCTTCACAGAGTACCCTTGCCGCTCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | GGTGACCGCTCAGACCCAGGTTCATTCCCTCTTATGTaGAAGGCACCAAATAGCCCAGGGGGAGATGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GDRSDPGSFPLM*KAPNSPGGDER Trigger: TCTCTCATCTCCCCCTGGGCTATTTGGTGCCTTCAACATAAGAGGGAATGAACCTGGGTCTGAGCGGTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | AGCTGCCTGGTGTGCTCAGATCAAACCAACCCACTCTaGAAACCTCGCGCCCATGTCCTCTATTTCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCLVCSDQTNPL*KPRAHVLYFPS Trigger: GGAAGGGAAATAGAGGACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTTGATCTGAGCACACCAGGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | CCTGGAATGGAGACTCAGAACCAGTTGGGGAAGGAGCATCCATACTaGGAGAGGGGACTGGTGATTCCTCAGGATCAGGAAGGGTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: PGMETQNQLGKEHPY*ERGLVIPQDQEGLT Trigger: AGTCAACCCTTCCTGATCCTGAGGAATCACCAGTCCCCTCTCCAAGTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCTCCATTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | TTCATTTCCAGGCTTGGAGAGGTGGACTCTGATTCTGGCTTTGGCTaGGAGACCTCTGAGGATTGGCACACGGCAACTTCAGTAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FISRLGEVDSDSGFG*ETSEDWHTATSVGG Trigger: CCCACCTACTGAAGTTGCCGTGTGCCAATCCTCAGAGGTCTCCAAGCCAAAGCCAGAATCAGAGTCCACCTCTCCAAGCCTGGAAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | GCCCAGACCAAACGGTCGATATGTAGACACAGAATTGGGGAGCTCTaGGGGGTAGCTTTCATCTCTTCCTGGAGGTGGCGACCTTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: AQTKRSICRHRIGEL*GVAFISSWRWRPCT Trigger: AGTACAAGGTCGCCACCTCCAGGAAGAGATGAAAGCTACCCCCAAGAGCTCCCCAATTCTGTGTCTACATATCGACCGTTTGGTCTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | GAGACTCAGAACCAGTTGGGGAAGGAGCATCCATACTaGGAGAGGGGACTGGTGATTCCTCAGGATCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ETQNQLGKEHPY*ERGLVIPQDQE Trigger: TTCCTGATCCTGAGGAATCACCAGTCCCCTCTCCAAGTATGGATGCTCCTTCCCCAACTGGTTCTGAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | CCAAGGGATGCCAACTCAGAGGCACTTGAGGGACCATaGTCAAAAGAGCTGCCTGGTGTGCTCAGATCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRDANSEALEGP*SKELPGVLRSN Trigger: GTTTGATCTGAGCACACCAGGCAGCTCTTTTGACAATGGTCCCTCAAGTGCCTCTGAGTTGGCATCCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | TGTCAAAAGAGCTGCCTGGTGTGCTCAGATCAAACCAACCCACTCTaGAAACCTCGCGCCCATGTCCTCTATTTCCCTTCCCAGGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: CQKSCLVCSDQTNPL*KPRAHVLYFPSQEL Trigger: GAGTTCCTGGGAAGGGAAATAGAGGACATGGGCGCGAGGTTTCAAGAGTGGGTTGGTTTGATCTGAGCACACCAGGCAGCTCTTTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | GGCTGGGTGAGGTTTGAGAGACTGACACCATCACTTGAAGTACCCTaGTTGGGTGTCTGGCCAAAATGCTTATCATCTGAGGGCTTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GWVRFERLTPSLEVP*LGVWPKCLSSEGLR Trigger: ACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGATGGTGTCAGTCTCTCAAACCTCACCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | TCGAGACACTTTCTGTTGACTTGGTGGGCACACCAGTaGAGACAGCAGGTTTCTCCACAGGCTTTTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRHFLLTWWAHQ*RQQVSPQAFLS Trigger: GGAAAGAAAAGCCTGTGGAGAAACCTGCTGTCTCCACTGGTGTGCCCACCAAGTCAACAGAAAGTGTCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | GCAACTTCAGTAGGTGGGGCAGCAGGGCTAGGATTGTaGGTACCAGTAAATCCCAAAGAACTGGATGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ATSVGGAAGLGL*VPVNPKELDGS Trigger: ACTACCATCCAGTTCTTTGGGATTTACTGGTACCCACAATCCTAGCCCTGCTGCCCCACCTACTGAAGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | CCTCTAACAAAAGGTGGCCTGGGTCTCTTTAAACTGTaGAATGGGTCTCTGCCGAGAAAAGCTTCCCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLTKGGLGLFKL*NGSLPRKASLG Trigger: GCCTAGGGAAGCTTTTCTCGGCAGAGACCCATTCCACAGTTTAAAGAGACCCAGGCCACCTTTTGTTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | AAACGGTCGATATGTAGACACAGAATTGGGGAGCTCTaGGGGGTAGCTTTCATCTCTTCCTGGAGGTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: KRSICRHRIGEL*GVAFISSWRWR Trigger: TCGCCACCTCCAGGAAGAGATGAAAGCTACCCCCAAGAGCTCCCCAATTCTGTGTCTACATATCGACCGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | GATTGGCACACGGCAACTTCAGTAGGTGGGGCAGCAGGGCTAGGATaGTGGGTACCAGTAAATCCCAAAGAACTGGATGGTAGTTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: DWHTATSVGGAAGLG*WVPVNPKELDGSLN Trigger: GTTTAAACTACCATCCAGTTCTTTGGGATTTACTGGTACCCACAATCCTAGCCCTGCTGCCCCACCTACTGAAGTTGCCGTGTGCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | TGGGTGAGGTTTGAGAGACTGACACCATCACTTGAAGTACCCTTGTaGGGTGTCTGGCCAAAATGCTTATCATCTGAGGGCTTGCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WVRFERLTPSLEVPL*GVWPKCLSSEGLRE Trigger: CTCACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGATGGTGTCAGTCTCTCAAACCTCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | AGAAGTTGTGGATCTTCATTTCCAGGCTTGGAGAGGTaGACTCTGATTCTGGCTTTGGCTTGGAGACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSCGSSFPGLER*TLILALAWRPL Trigger: CAGAGGTCTCCAAGCCAAAGCCAGAATCAGAGTCCACCTCTCCAAGCCTGGAAATGAAGATCCACAACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | CTGACACCATCACTTGAAGTACCCTTGTTGGGTGTCTaGCCAAAATGCTTATCATCTGAGGGCTTGCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LTPSLEVPLLGV*PKCLSSEGLRE Trigger: CTCACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGATGGTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | ACCAGGACGACAAGCCTTGAATGGATTCCATGGTGTTaGTCACCGACTGGAATTTTCGATCCAACGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: TRTTSLEWIPWC*SPTGIFDPTKT Trigger: AGTCTTCGTTGGATCGAAAATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
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| CDS CCA 72 bp | CTATACACCAGGACGACAAGCCTTGAATGGATTCCATaGTGTTGGTCACCGACTGGAATTTTCGATCCAACG | + |
|
Preference number: 6 (lower is better) Translates to: LYTRTTSLEWIP*CWSPTGIFDPT Trigger: CGTTGGATCGAAAATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
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| CDS CAA 90 bp | AACCAGGATTACCTTTCAAGAAGTTGTGGATCTTCATTTCCAGGCTaGGAGAGGTGGACTCTGATTCTGGCTTTGGCTTGGAGACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NQDYLSRSCGSSFPG*ERWTLILALAWRPL Trigger: CAGAGGTCTCCAAGCCAAAGCCAGAATCAGAGTCCACCTCTCCAAGCCTGGAAATGAAGATCCACAACTTCTTGAAAGGTAATCCTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS GCA 72 bp | TCACTTGAAGTACCCTTGTTGGGTGTCTGGCCAAAATaGTTATCATCTGAGGGCTTGCGTGAGGCGTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLEVPLLGVWPK*LSSEGLREAFL Trigger: TAAAAACGCCTCACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | TACCTTTCAAGAAGTTGTGGATCTTCATTTCCAGGCTaGGAGAGGTGGACTCTGATTCTGGCTTTGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: YLSRSCGSSFPG*ERWTLILALAW Trigger: CCAAGCCAAAGCCAGAATCAGAGTCCACCTCTCCAAGCCTGGAAATGAAGATCCACAACTTCTTGAAAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | TTTGAGAGACTGACACCATCACTTGAAGTACCCTTGTaGGGTGTCTGGCCAAAATGCTTATCATCTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FERLTPSLEVPL*GVWPKCLSSEG Trigger: GCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGATGGTGTCAGTCTCTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CCA 72 bp | AAGCCACTGAAACCAGGATTACCTTTCAAGAAGTTGTaGATCTTCATTTCCAGGCTTGGAGAGGTGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: KPLKPGLPFKKL*IFISRLGEVDS Trigger: AGAGTCCACCTCTCCAAGCCTGGAAATGAAGATCCACAACTTCTTGAAAGGTAATCCTGGTTTCAGTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | GTGTTTCTTGTTTTCTATACACCAGGACGACAAGCCTaGAATGGATTCCATGGTGTTGGTCACCGACTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFLVFYTPGRQA*NGFHGVGHRLE Trigger: TTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAGAAAACAAGAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
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| CDS CAA 72 bp | AGGTTTGAGAGACTGACACCATCACTTGAAGTACCCTaGTTGGGTGTCTGGCCAAAATGCTTATCATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RFERLTPSLEVP*LGVWPKCLSSE Trigger: CTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTACTTCAAGTGATGGTGTCAGTCTCTCAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | CCATACTTGGAGAGGGGACTGGTGATTCCTCAGGATCAGGAAGGGTaGACTTCAATTGATCCAACTTCTTCTTTAAGTTGTTTACTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PYLERGLVIPQDQEG*TSIDPTSSLSCLLG Trigger: ACCGAGTAAACAACTTAAAGAAGAAGTTGGATCAATTGAAGTCAACCCTTCCTGATCCTGAGGAATCACCAGTCCCCTCTCCAAGTATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CAA 90 bp | GTACCCTTGTTGGGTGTCTGGCCAAAATGCTTATCATCTGAGGGCTaGCGTGAGGCGTTTTTAAGCATATTCTTAAACTCAATCGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VPLLGVWPKCLSSEG*REAFLSIFLNSIVD Trigger: ATCGACGATTGAGTTTAAGAATATGCTTAAAAACGCCTCACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAACAAGGGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 72 bp | TGTTTCTTGTTTTCTATACACCAGGACGACAAGCCTTaGATGGATTCCATGGTGTTGGTCACCGACTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CFLFSIHQDDKP*MDSMVLVTDWN Trigger: ATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAGAAAACAAGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
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| CDS CCA 72 bp | TCTTGTTTTCTATACACCAGGACGACAAGCCTTGAATaGATTCCATGGTGTTGGTCACCGACTGGAATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SCFLYTRTTSLE*IPWCWSPTGIF Trigger: GAAAATTCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGGTGTATAGAAAACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
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| CDS CAA 72 bp | GAGAGGGGACTGGTGATTCCTCAGGATCAGGAAGGGTaGACTTCAATTGATCCAACTTCTTCTTTAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ERGLVIPQDQEG*TSIDPTSSLSC Trigger: ACAACTTAAAGAAGAAGTTGGATCAATTGAAGTCAACCCTTCCTGATCCTGAGGAATCACCAGTCCCCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS TCA 72 bp | GTTTCTCCACAGGCTTTTCTTTCCGGTCCTCCACAATaGTTTTTGATCCATCATCTTCCACATCTGAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSPQAFLSGPPQ*FLIHHLPHLRV Trigger: AACTCTCAGATGTGGAAGATGATGGATCAAAAATCATTGTGGAGGACCGGAAAGAAAAGCCTGTGGAGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS CAA 72 bp | TTGGGTGTCTGGCCAAAATGCTTATCATCTGAGGGCTaGCGTGAGGCGTTTTTAAGCATATTCTTAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGVWPKCLSSEG*REAFLSIFLNS Trigger: TGAGTTTAAGAATATGCTTAAAAACGCCTCACGCAAGCCCTCAGATGATAAGCATTTTGGCCAGACACCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS TCA 72 bp | GATCGTTTGTACATCAGCAACTCTTCAATGAGGGCCTaGGATCGAAACTCAGCAACAATCTTAGATTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DRLYISNSSMRA*DRNSATILDLR Trigger: TCTCAAATCTAAGATTGTTGCTGAGTTTCGATCTCAGGCCCTCATTGAAGAGTTGCTGATGTACAAACGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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| CDS TCA 72 bp | AGCTGCTTAGGATCGGGATGTTTAAGTTTAAGCCACTaGAACCAGGATTACCTTTCAAGAAGTTGTGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SCLGSGCLSLSH*NQDYLSRSCGS Trigger: AGATCCACAACTTCTTGAAAGGTAATCCTGGTTTCAGTGGCTTAAACTTAAACATCCCGATCCTAAGCAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000200164.5 |
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| CDS GCA 72 bp | GCTTTTGGATTCGTGGATGTTTGTGATTTCTTCCACTaGTTATTCGGTTGTTTGTTCAGATTTTCTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AFGFVDVCDFFH*LFGCLFRFSFS Trigger: GCTGAAAGAAAATCTGAACAAACAACCGAATAAGCAGTGGAAGAAATCACAAACATCCACGAATCCAAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 |
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| CDS CAA 90 bp | CCATTCACAAACTCCTCTAGCTTGGAACTTGCTTCTTCAAATTCTTaGGAGAACTTCTTTCCACCTGTTTTATCTTTTAAACACTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PFTNSSSLELASSNS*ENFFPPVLSFKHLR Trigger: TCTCAAGTGTTTAAAAGATAAAACAGGTGGAAAGAAGTTCTCCAAAGAATTTGAAGAAGCAAGTTCCAAGCTAGAGGAGTTTGTGAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090791.8 ENSMUST00000197449.2 ENSMUST00000200164.5 |
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