Pregenerated sensors for RPRD1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027651Ensembl transcript IDs: ENSMUST00000029180.14, ENSMUST00000103123.10, ENSMUST00000109518.8, ENSMUST00000128206.8, ENSMUST00000135603.2, ENSMUST00000152452.8
Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGAGAGCCCAGACTCCAGCTGTGGAGCAGTTATCAGCCTGGGCATaGTATCCCAACAGCTCCCTTCCCAGCCCCAGGGGACAGAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: TRAQTPAVEQLSAWA*YPNSSLPSPRGQRV Trigger: GACCCTCTGTCCCCTGGGGCTGGGAAGGGAGCTGTTGGGATAGCATGCCCAGGCTGATAACTGCTCCACAGCTGGAGTCTGGGCTCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | TGTTTGCAGCGGTGGCCTGCACAGGTGAGCTGCAGCTGGGCAGTCTaGGACCAATCTCAGCATGCAGTAGGCCCATGGGGACACAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: CLQRWPAQVSCSWAV*DQSQHAVGPWGHRE Trigger: CTCCCTGTGTCCCCATGGGCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCGCTGCAAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR CCA 90 bp | AGTGCTGGGTGTTTGCAGCGGTGGCCTGCACAGGTGAGCTGCAGCTaGGCAGTCTGGGACCAATCTCAGCATGCAGTAGGCCCATGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SAGCLQRWPAQVSCS*AVWDQSQHAVGPWG Trigger: TCCCCATGGGCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCGCTGCAAACACCCAGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR CCA 90 bp | ACATGCACGAGAGCCCAGACTCCAGCTGTGGAGCAGTTATCAGCCTaGGCATGCTATCCCAACAGCTCCCTTCCCAGCCCCAGGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: TCTRAQTPAVEQLSA*ACYPNSSLPSPRGQ Trigger: CTGTCCCCTGGGGCTGGGAAGGGAGCTGTTGGGATAGCATGCCCAGGCTGATAACTGCTCCACAGCTGGAGTCTGGGCTCTCGTGCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | GGCCGCTGGGACAACAACTATGGGGATGGTATCAGTCCCATGGCCTaGATTGGCAGTGTGGACATTCTGCGGCGCTGGAAGGAACACGGC | + |
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Preference number: 1 (lower is better) Translates to: GRWDNNYGDGISPMA*IGSVDILRRWKEHG Trigger: GCCGTGTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR TCA 90 bp | TCTGAAACTGGGGACCCTGGAGCAATGTGGCAGGGAAGGCTGTGGTaGGAAGCCTGGCAAACGACTTGTGAGCCCTGCCACTCTGTACCT | + |
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Preference number: 1 (lower is better) Translates to: SETGDPGAMWQGRLW*EAWQTTCEPCHSVP Trigger: AGGTACAGAGTGGCAGGGCTCACAAGTCGTTTGCCAGGCTTCTCACCACAGCCTTCCCTGCCACATTGCTCCAGGGTCCCCAGTTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | CAGAGGTGCCAGGCCCCCTGTGACATTAGGCAACAGCGAAAGGTCTaGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: QRCQAPCDIRQQRKV*QALNVGLEFLADLG Trigger: ACCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTGTTGCCTAATGTCACAGGGGGCCTGGCACCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| 3UTR CCA 90 bp | TTCTGGGCCGCTGGGACAACAACTATGGGGATGGTATCAGTCCCATaGCCTGGATTGGCAGTGTGGACATTCTGCGGCGCTGGAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: FWAAGTTTMGMVSVP*PGLAVWTFCGAGRN Trigger: GTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR GCA 90 bp | TGCACAGGTGAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCATaGAGTAGGCCCATGGGGACACAGGGAGACAGGATTCCAATATTG | + |
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Preference number: 1 (lower is better) Translates to: CTGELQLGSLGPISA*SRPMGTQGDRIPIL Trigger: CAATATTGGAATCCTGTCTCCCTGTGTCCCCATGGGCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR CCA 90 bp | CTGGGACAACAACTATGGGGATGGTATCAGTCCCATGGCCTGGATTaGCAGTGTGGACATTCTGCGGCGCTGGAAGGAACACGGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: LGQQLWGWYQSHGLD*QCGHSAALEGTRLS Trigger: TGACAGCCGTGTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR TCA 90 bp | AGGCCCCCTGTGACATTAGGCAACAGCGAAAGGTCTGGCAAGCTCTaGATGTGGGACTTGAGTTCCTTGCGGACCTGGGTTACTCGAGCA | + |
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Preference number: 1 (lower is better) Translates to: RPPVTLGNSERSGKL*MWDLSSLRTWVTRA Trigger: TGCTCGAGTAACCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTGTTGCCTAATGTCACAGGGGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| 3UTR CCA 90 bp | TGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGTGGCGTaGTGTGTAGGGAGGTGTTCCGCAGCAGAGACAGGGGTTTCACCT | + |
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Preference number: 1 (lower is better) Translates to: WRVFRVVCACDSKVA*CVGRCSAAETGVSP Trigger: AGGTGAAACCCCTGTCTCTGCTGCGGAACACCTCCCTACACACCACGCCACTTTACTGTCACATGCACACACCACTCTGAACACCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | GCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGCCGACCTTGTaGGCAATGGTGGCCAGGAAAGCCCAATCCCTGCAGCCTGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: AIWQTLCGKAMLPTL*AMVARKAQSLQPES Trigger: GGACTCAGGCTGCAGGGATTGGGCTTTCCTGGCCACCATTGCTCACAAGGTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR GCA 90 bp | CTCCCTTCCTCTGCTGGAGGTGAGTTGTTTGAGTACTCCTCTCTCTaGATGGGAGCAAGGATGCATATAGTGGCAGGAACTGCCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LPSSAGGELFEYSSL*MGARMHIVAGTAWH Trigger: GTGCCAGGCAGTTCCTGCCACTATATGCATCCTTGCTCCCATGCAGAGAGAGGAGTACTCAAACAACTCACCTCCAGCAGAGGAAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | GAGCTGAGTGGACAGACGGGGCCGGACTGGAGCACACAGGCCTTATaGGCTGAAGACCAGAATTTGGATTCTATTCTGGAAGCAGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: ELSGQTGPDWSTQAL*AEDQNLDSILEAVS Trigger: ACTCACTGCTTCCAGAATAGAATCCAAATTCTGGTCTTCAGCTCATAAGGCCTGTGTGCTCCAGTCCGGCCCCGTCTGTCCACTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR TCA 90 bp | AGCAGTGAGTGTTTCAGAGATGCGTGGGGCCAGTGTGGGTGTTTGTaGAACTCAAATCACTCCATGCCACTTGGGAGTGACCCTGGATTC | + |
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Preference number: 1 (lower is better) Translates to: SSECFRDAWGQCGCL*NSNHSMPLGSDPGF Trigger: GAATCCAGGGTCACTCCCAAGTGGCATGGAGTGATTTGAGTTTCACAAACACCCACACTGGCCCCACGCATCTCTGAAACACTCACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR TCA 90 bp | GAGTGGACAGACGGGGCCGGACTGGAGCACACAGGCCTTATGAGCTaGAGACCAGAATTTGGATTCTATTCTGGAAGCAGTGAGTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: EWTDGAGLEHTGLMS*RPEFGFYSGSSECF Trigger: GAAACACTCACTGCTTCCAGAATAGAATCCAAATTCTGGTCTTCAGCTCATAAGGCCTGTGTGCTCCAGTCCGGCCCCGTCTGTCCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR GCA 90 bp | AGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTaGCGACCTTGTGAGCAATGGTGGCCAGGAAAGCCCAATCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RKCRQFGKLFVAKLC*RPCEQWWPGKPNPC Trigger: GCAGGGATTGGGCTTTCCTGGCCACCATTGCTCACAAGGTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | TCTGTTGATTACAGGTCAACTGCAATGATGACCAGGGTGTGCTTCTaGGCCGCTGGGACAACAACTATGGGGATGGTATCAGTCCCATGG | + |
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Preference number: 1 (lower is better) Translates to: SVDYRSTAMMTRVCF*AAGTTTMGMVSVPW Trigger: CCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCCCAGAAGCACACCCTGGTCATCATTGCAGTTGACCTGTAATCAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR GCA 90 bp | ATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATaGTGCCGACCTTGTGAGCAATGGTGGCCAGGAAAGCCCAATCCC | + |
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Preference number: 1 (lower is better) Translates to: IRKCRQFGKLFVAKL*CRPCEQWWPGKPNP Trigger: GGGATTGGGCTTTCCTGGCCACCATTGCTCACAAGGTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | TCACCTGAGTCAGTGCTGTCCTGTAACCTCTGGAGAAAAGGATGCTaGCAGAAAAGGCAGAGTGAACAAGCAAACAGCAGCCTGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: SPESVLSCNLWRKGC*QKRQSEQANSSLHS Trigger: AGAGTGCAGGCTGCTGTTTGCTTGTTCACTCTGCCTTTTCTGTCAGCATCCTTTTCTCCAGAGGTTACAGGACAGCACTGACTCAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | GCCGTAGGTACTCCTTCTGATCCACACGATAGGCTCTGTTTCCCATaGTGCTCTGTTGATTACAGGTCAACTGCAATGATGACCAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: AVGTPSDPHDRLCFP*CSVDYRSTAMMTRV Trigger: CACCCTGGTCATCATTGCAGTTGACCTGTAATCAACAGAGCATCATGGGAAACAGAGCCTATCGTGTGGATCAGAAGGAGTACCTACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR CCA 90 bp | AGAGCTGCTACAGTCTTTTGGTCTGTTTTGTGGGAAAGCAGTGTCTaGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGTGGCG | + |
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Preference number: 1 (lower is better) Translates to: RAATVFWSVLWESSV*RVFRVVCACDSKVA Trigger: CGCCACTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | AGTTGTCATCAGAGCAGAGCTGCTACAGTCTTTTGGTCTGTTTTGTaGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGT | + |
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Preference number: 1 (lower is better) Translates to: SCHQSRAATVFWSVL*ESSVWRVFRVVCAC Trigger: ACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGCTCTGCTCTGATGACAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | AACCTGGTCAAGGCCAGCTCAGACTTCCATGGCATGTGCTGTCACTaGGGCAAGCTTCTCTTGAAAGCTTCCAGAAGTACACATGATTTT | + |
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Preference number: 1 (lower is better) Translates to: NLVKASSDFHGMCCH*GKLLLKASRSTHDF Trigger: AAAATCATGTGTACTTCTGGAAGCTTTCAAGAGAAGCTTGCCTCAGTGACAGCACATGCCATGGAAGTCTGAGCTGGCCTTGACCAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | TTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGCTGGTGTaGCTGAAAAGACTGCAACCAAAGGCCTCTCAAGACATCCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: FTILQIKQFPQGLLV*LKRLQPKASQDILC Trigger: ACAGAGGATGTCTTGAGAGGCCTTTGGTTGCAGTCTTTTCAGTCACACCAGCAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | CAGAGCACCCTGTCTCCAGAGTACTCAGTCATCAGGGTCTTCCATTaGATGTCAACCTCAGCAGAAGAGAAGTCCATGAAAACACTTAAA | + |
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Preference number: 1 (lower is better) Translates to: QSTLSPEYSVIRVFH*MSTSAEEKSMKTLK Trigger: TTTAAGTGTTTTCATGGACTTCTCTTCTGCTGAGGTTGACATCCAATGGAAGACCCTGATGACTGAGTACTCTGGAGACAGGGTGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | CACACTTTCCTGATAGTGAACTTGGACTTCAGCTGCAGGTGGTCTTaGTGGACCACCATTACTAAAAAGGAAGTCCTTTGCATCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: HTFLIVNLDFSCRWS*WTTITKKEVLCIMR Trigger: TCTCATGATGCAAAGGACTTCCTTTTTAGTAATGGTGGTCCATCAAGACCACCTGCAGCTGAAGTCCAAGTTCACTATCAGGAAAGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR TCA 90 bp | CTGTCACTGAGGCAAGCTTCTCTTGAAAGCTTCCAGAAGTACACATaGTTTTCATGGCTTATGGGTGTAAGAGAGCGAAAGATGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: LSLRQASLESFQKYT*FSWLMGVRERKMEK Trigger: CTTTTCCATCTTTCGCTCTCTTACACCCATAAGCCATGAAAATCATGTGTACTTCTGGAAGCTTTCAAGAGAAGCTTGCCTCAGTGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | ACTTCAGCTCTGGGCGACAATTCCTATCACACTAGTAGGACAAAATaGTTTCTGCCCTTTCCAATGTCAAATATAAGCCTGCCAGATTAC | + |
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Preference number: 1 (lower is better) Translates to: TSALGDNSYHTSRTK*FLPFPMSNISLPDY Trigger: GTAATCTGGCAGGCTTATATTTGACATTGGAAAGGGCAGAAACCATTTTGTCCTACTAGTGTGATAGGAATTGTCGCCCAGAGCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | CTAGACGTAAAAATCGCAACTACATCATTCAGTCATAATGTCAGCTaGCATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTC | + |
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Preference number: 1 (lower is better) Translates to: LDVKIATTSFSHNVS*HDNGIQPQISLPPL Trigger: GAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGATGTAGTTGCGATTTTTACGTCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | TTCATTAAAACGAAACTAACTTCCTCACAGGAAATCTGCTGGAAGTaGTGTAATGAGGCCAACACATTCATTTACATAATCGCTACTGGT | + |
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Preference number: 1 (lower is better) Translates to: FIKTKLTSSQEICWK*CNEANTFIYIIATG Trigger: ACCAGTAGCGATTATGTAAATGAATGTGTTGGCCTCATTACACCACTTCCAGCAGATTTCCTGTGAGGAAGTTAGTTTCGTTTTAATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR CCA 90 bp | AAGCATTTCATTAAAACGAAACTAACTTCCTCACAGGAAATCTGCTaGAAGTGGTGTAATGAGGCCAACACATTCATTTACATAATCGCT | + |
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Preference number: 1 (lower is better) Translates to: KHFIKTKLTSSQEIC*KWCNEANTFIYIIA Trigger: AGCGATTATGTAAATGAATGTGTTGGCCTCATTACACCACTTCCAGCAGATTTCCTGTGAGGAAGTTAGTTTCGTTTTAATGAAATGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCATCAGGGTCGAGGCAGATGCTGGCTaGAGAGATGGAGCTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PQQLLQSTLSPEYSVIRVEADAG*RDGAGA Trigger: TGCCCCAGCTCCATCTCTTCAGCCAGCATCTGCCTC...GACCCTGATGACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCGAAAGGTCTGGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGCTGTCCCTCTCTCCCTaGCAGCTCCAGGGCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: QRKVWQALNVGLEFLADLLSLSP*QLQGSY Trigger: GTAGCTGCCCTGGAGCTGGCAGGGAGAGAGGGACAG...CAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| 3UTR CAA 90 bp | GCTGGGACAACAACTATGGGGATGGTATCAGTCCCATGGCCTGGATaGGCAGTGTGGACATTCTGCGGCGCTGGAAGGAACACGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: AGTTTMGMVSVPWPG*AVWTFCGAGRNTAV Trigger: GACAGCCGTGTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGGAGGCAGATGCTGGCTaGAGAGATGGAGCTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VLRMYHYQPPGEDSVQTEEADAG*RDGAGA Trigger: TGCCCCAGCTCCATCTCTTCAGCCAGCATCTGCCTC...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAACCATCTGCATGGCTCTaGACCATGCTCAGAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQPSAWL*TMLRGE Trigger: CTCCCCTCTGAGCATGGTTCAGAGCCATGCAGATGG...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGAGATCTCAACCATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCCTGAAGAGATGGAGCTaGGGCAGGGGACTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SGRSQPFRTTAAASEHPVLKRWS*GRGLSP Trigger: TGGAGACAGTCCCCTGCCCCAGCTCCATCTCTTCAG...GACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATGGTTGAGATCTCCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAACTGAAGAGATGGAGCTaGGGCAGGGGACTGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQLKRWS*GRGLSP Trigger: TGGAGACAGTCCCCTGCCCCAGCTCCATCTCTTCAG...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGATTCTATTCTGGAAGCAGTGAGTGTTTCAGAGATGCGTGGGGCCAGTGTGGGTGGCCTGCACAGGTaGGCTGCAGCTGGGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LDSILEAVSVSEMRGASVGGLHR*AAAGQS Trigger: AGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACC...CACACTGGCCCCACGCATCTCTGAAACACTCACTGCTTCCAGAATAGAATCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTGGGAGACTGGGGGCATaGTGGAGGCACACAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSAGRLGA*WRHTTR Trigger: CCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCC...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR CCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATACACAGTTGGGAGACTaGGGGCATGGTGGAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: FAHSWETGGMVEAHNKEDTQLGD*GHGGGT Trigger: TGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGT...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAATTGGCTCTGCTAGGAGACTGTCTTCCTCTGTCTCCTGAGCCCTTGGCTCCTGGATTGGCAGTGTaGACATTCTGCGGCGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: QQLALLGDCLPLSPEPLAPGLAV*TFCGAG Trigger: TCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGG...AGCCAAGGGCTCAGGAGACAGAGGAAGACAGTCTCCTAGCAGAGCCAATTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATCAGTGGCAAGAGACATaGGTGGGAGGGAGAGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FAHSWETGGMVEAHNKEDQWQET*VGGRVC Trigger: ACAGACTCTCCCTCCCACTCATGTCTCTTGCCACTG...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAATCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACAGTGGCAAGAGACATaGGTGGGAGGGAGAGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GIQCHLLASTGTWHVHGAQWQET*VGGRVC Trigger: ACAGACTCTCCCTCCCACTCATGTCTCTTGCCACTG...TGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCATCAGGGTCGTAAGAGTTACGCACTaGCTGCTGGTCAGAGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: PQQLLQSTLSPEYSVIRVVRVTH*LLVRDS Trigger: GGAGTCTCTGACCAGCAGTCAGTGCGTAACTCTTAC...GACCCTGATGACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACAACTATGGGGATGGTATCAGTCCCATGGCCTGGATTGGCAGTGTGGACATACGGCTGTCAGCAAGTaGAGTACGGGCAGTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QQLWGWYQSHGLDWQCGHTAVSK*STGSAG Trigger: CCCAGCACTGCCCGTACTTCACTTGCTGACAGCCGT...ATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR TCA 90 bp | AACCATGAATCAGGATGCACGTGCCGTGGGAGCAGGATCTGTGAGTGTCTGAGCACTGGGAGGAAGGGATaGTACCCTGGGGAGAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: NHESGCTCRGSRICECLSTGRKG*YPGEKL Trigger: CAGTTTCTCCCCAGGGTATCATCCCTTCCTCCCAGT...GCTCAGACACTCACAGATCCTGCTCCCACGGCACGTGCATCCTGATTCATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAACAGCTCAGACTTCCATaGCATGTGCTGTCACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQQLRLP*HVLSLR Trigger: CCTCAGTGACAGCACATGCCATGGAAGTCTGAGCTG...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGAGCAGTTATCAGCCTaGGCATGCTATCCCAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQEQLSA*ACYPNS Trigger: GCTGTTGGGATAGCATGCCCAGGCTGATAACTGCTC...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGACAGTAAAGTGGCGTaGTGTGTAGGGAGGTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQDSKVA*CVGRCS Trigger: GGAACACCTCCCTACACACCACGCCACTTTACTGTC...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTTTTAGGAAGGTGCTCTaGAACTGGGGACCCTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSAFRKVL*NWGPWS Trigger: GCTCCAGGGTCCCCAGTTTCAGAGCACCTTCCTAAA...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGCCTGCTTTAGGAAGGTaGTCTGAAACTGGGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: VLRMYHYQPPGEDSVQTEPALGR*SETGDP Trigger: AGGGTCCCCAGTTTCAGAGCACCTTCCTAAAGCAGG...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAGCTTTCACCCAGCAAATACTGACCGACAGCCACTAACATCCTGGGCGCTAGCAGTGTGGACATTCTaGGGCGCTGGAAGGAACACG | + |
|
Preference number: 2 (lower is better) Translates to: SSFHPANTDRQPLTSWALAVWTF*GAGRNT Trigger: CGTGTTCCTTCCAGCGCCGCAGAATGTCCACACTGC...TAGCGCCCAGGATGTTAGTGGCTGTCGGTCAGTATTTGCTGGGTGAAAGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAACTTGCTTCTTTTCTCTaGCACACATGGGAACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQLASFL*HTWEPG Trigger: CCCAGGTTCCCATGTGTGCCAGAGAAAAGAAGCAAG...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTGCTTCTTTTCTCTGGCACACATGGGAACCTGGGGCATGATACCTGTCCTATGCTGGCTGAAGAGATaGAGCTGGGGCAGGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: TCFFSLAHMGTWGMIPVLCWLKR*SWGRGL Trigger: CAGTCCCCTGCCCCAGCTCCATCTCTTCAGCCAGCA...TAGGACAGGTATCATGCCCCAGGTTCCCATGTGTGCCAGAGAAAAGAAGCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGGGCAAGAGACATGAGTaGGAGGGAGAGTCTGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VLRMYHYQPPGEDSVQTEGKRHE*EGESVF Trigger: GAACACAGACTCTCCCTCCCACTCATGTCTCTTGCC...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATCAGCTCAGACTTCCATaGCATGTGCTGTCACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FAHSWETGGMVEAHNKEDQLRLP*HVLSLR Trigger: CCTCAGTGACAGCACATGCCATGGAAGTCTGAGCTG...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCAGACAGTAAAGTGGCGTaGTGTGTAGGGAGGTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GIQCHLLASTGTWHVHGADSKVA*CVGRCS Trigger: GGAACACCTCCCTACACACCACGCCACTTTACTGTC...TGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATAAGACTGGGGGCATGGTaGAGGCACACAACAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SNATFWPLQAPGMYMVHIRLGAW*RHTTRK Trigger: CTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCT...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTCTGTGCAGACAGAGCGCCCTCCATTGATGATCACTAATCACTGCACGAGGACACAGTTGGGAGACTaGGGGCATGGTGGAGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: DSVQTERPPLMITNHCTRTQLGD*GHGGGT Trigger: TGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGT...CCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTGCACAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTCAGGGCTATTCATTCAAGCTTTCACCCAGCAAATACTGACCGACAGCCAGTCCTCCCTCAGGGGTaGTCCCCAGAGATGACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLRAIHSSFHPANTDRQPVLPQG*SPEMTG Trigger: CCCAGTCATCTCTGGGGACCACCCCTGAGGGAGGAC...TGGCTGTCGGTCAGTATTTGCTGGGTGAAAGCTTGAATGAATAGCCCTGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CAA 90 bp | TACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGCGCCCTCCATaGATGATCACTAATCACTGCACGAGGCAGGGAGAAGAAACATCA | + |
|
Preference number: 2 (lower is better) Translates to: YQPPGEDSVQTERPP*MITNHCTRQGEETS Trigger: TGATGTTTCTTCTCCCTGCCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTGTAAGAGTTACGCACTaGCTGCTGGTCAGAGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSAVRVTH*LLVRDS Trigger: GGAGTCTCTGACCAGCAGTCAGTGCGTAACTCTTAC...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCTCTCCAGCAGTGACTTaGTTCTTTTCTCTGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVSPAVT*FFSLAH Trigger: GTGTGCCAGAGAAAAGAAGCAAGTCACTGCTGGAGA...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAATCTCCAGCAGTGACTTaGTTCTTTTCTCTGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQSPAVT*FFSLAH Trigger: GTGTGCCAGAGAAAAGAAGCAAGTCACTGCTGGAGA...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCATCAGGGTCTCTCCAGCAGTGACTTaGTTCTTTTCTCTGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: PQQLLQSTLSPEYSVIRVSPAVT*FFSLAH Trigger: GTGTGCCAGAGAAAAGAAGCAAGTCACTGCTGGAGA...GACCCTGATGACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTCCTGCTTTAGGAAGGTaGTCTGAAACTGGGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSAPALGR*SETGDP Trigger: AGGGTCCCCAGTTTCAGAGCACCTTCCTAAAGCAGG...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGATTCTATTCTGGAAGCAGTGAGTGTTTCAGAGATGCGTGGGGCCAGTGTGGTGAAGTACGGGCAGTaGTGGGTGTTTGCAGCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LDSILEAVSVSEMRGASVVKYGQ*WVFAAV Trigger: CACCGCTGCAAACACCCAGCACTGCCCGTACTTCAC...CACACTGGCCCCACGCATCTCTGAAACACTCACTGCTTCCAGAATAGAATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAATTGGCAAACTCTTTGTaGCAAAGCTATGCTGCCGAC | + |
|
Preference number: 2 (lower is better) Translates to: REVRTQLGDWGHGGGTQQLANSL*QSYAAD Trigger: GTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAA...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTGACAGTAAAGTGGCGTaGTGTGTAGGGAGGTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSADSKVA*CVGRCS Trigger: GGAACACCTCCCTACACACCACGCCACTTTACTGTC...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCGGGAGACTGGGGGCATaGTGGAGGCACACAACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: CRRPRFDPQHTTICNSSSGRLGA*WRHTTR Trigger: CCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCC...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTGACATCCTCTGTGTGTaGGGGGACATCACAAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSADILCV*GDITSP Trigger: AGGACTTGTGATGTCCCCCCACACACAGAGGATGTC...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCTATTCATTCAAGCTTTCACCCAGCAAATACTGACCGACAGCCACTAACAGGGTGTTTGCAGCGGTaGCCTGCACAGGTGAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RAIHSSFHPANTDRQPLTGCLQR*PAQVSC Trigger: GCAGCTCACCTGTGCAGGCCACCGCTGCAAACACCC...TGTTAGTGGCTGTCGGTCAGTATTTGCTGGGTGAAAGCTTGAATGAATAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCAAAAGGAGCTGAGTGGACAGACGGGGCCGGACTGGAGCACACAGGCCTTATACAATCCTTCATCCTaGCATGGCCTGACTTTGATC | + |
|
Preference number: 2 (lower is better) Translates to: VQKELSGQTGPDWSTQALYNPSS*HGLTLI Trigger: GATCAAAGTCAGGCCATGCCAGGATGAAGGATTGTA...TAAGGCCTGTGTGCTCCAGTCCGGCCCCGTCTGTCCACTCAGCTCCTTTTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGGAGGCAAGCTTCTCTTaGAAGCTTCCAGAAGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: VLRMYHYQPPGEDSVQTEEASFS*KLPEVH Trigger: GTGTACTTCTGGAAGCTTTCAAGAGAAGCTTGCCTC...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTAGGAAGGTGCTCTaGAACTGGGGACCCTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GDWGHGGGTQQGRLKTEAFRKVL*NWGPWS Trigger: GCTCCAGGGTCCCCAGTTTCAGAGCACCTTCCTAAA...TGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATATTATCAGCCTGGGCATaGTATCCCAACAGCTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SNATFWPLQAPGMYMVHILSAWA*YPNSSL Trigger: AAGGGAGCTGTTGGGATAGCATGCCCAGGCTGATAA...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTCCCTTCCTCTGCTGGAGGTGAGTTGTTTGAGTACTCCTCTCTCTGCATGGTTATCAGCCTGGGCATaGTATCCCAACAGCTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HSLPLLEVSCLSTPLSAWLSAWA*YPNSSL Trigger: AAGGGAGCTGTTGGGATAGCATGCCCAGGCTGATAA...CCATGCAGAGAGAGGAGTACTCAAACAACTCACCTCCAGCAGAGGAAGGGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTCTGTGCAGACAGAGCGCCCTCCATTGATGATCACTAATCACTGCACGAGGGGCAAGAGACATGAGTaGGAGGGAGAGTCTGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: DSVQTERPPLMITNHCTRGKRHE*EGESVF Trigger: GAACACAGACTCTCCCTCCCACTCATGTCTCTTGCC...CCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTGCACAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGGAGCAGTTATCAGCCTaGGCATGCTATCCCAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKEQLSA*ACYPNS Trigger: GCTGTTGGGATAGCATGCCCAGGCTGATAACTGCTC...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TACGCACTGACTGCTGGTCAGAGACTCCAAAGAATAAACACCATTGAGCTGACCCCCAGACTCCAGCTGTaGAGCAGTTATCAGCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: YALTAGQRLQRINTIELTPRLQL*SSYQPG Trigger: CCCAGGCTGATAACTGCTCCACAGCTGGAGTCTGGG...GGTCAGCTCAATGGTGTTTATTCTTTGGAGTCTCTGACCAGCAGTCAGTGCGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCGCTGCTACAGTCTTTTaGTCTGTTTTGTGGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVAATVF*SVLWES Trigger: GCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGC...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCATCAGGGTCTTCCATTaGATGTCAACCTCAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVIRVFH*MSTSAE Trigger: TTCTGCTGAGGTTGACATCCAATGGAAGACCCTGAT...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTGGGCCGCTGGGACAACAACTATGGGGATGGTATCAGTCCCATGGCCTGGGGATATCGTGTGTCCTaGAGACTAGAAAGCAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLGRWDNNYGDGISPMAWGYRVS*RLESNV Trigger: AACATTGCTTTCTAGTCTCCAGGACACACGATATCC...CCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCCCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CAA 90 bp | CCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGCTGGAGGTGAGTaGTTTGAGTACTCCTCTCTCTGCATGGGAGCAAGGATGCATATA | + |
|
Preference number: 2 (lower is better) Translates to: PQISLPPLPSSAGGE*FEYSSLCMGARMHI Trigger: TATATGCATCCTTGCTCCCATGCAGAGAGAGGAGTACTCAAACAACTCACCTCCAGCAGAGGAAGGGAGTGGAGGGAGACTAATTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATAGAGGCAAGCTTCTCTTaGAAGCTTCCAGAAGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: SNATFWPLQAPGMYMVHIEASFS*KLPEVH Trigger: GTGTACTTCTGGAAGCTTTCAAGAGAAGCTTGCCTC...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAACAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTGAGTCCCATCTCACCTGTCCTAGTCAGTTaGAAAGAGGTCACCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ITASTKTRLDRVELSPISPVLVS*KEVTSR Trigger: TCTGCTGGTGACCTCTTTTCAACTGACTAGGACAGG...TGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGTCCTCACAGGAAATCTaGTGGAAGTGGTGTAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLRMYHYQPPGEDSVQTESSQEI*WKWCNE Trigger: CTCATTACACCACTTCCAGCAGATTTCCTGTGAGGA...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCATGGCTTATGGGTGTAAGAGAGCGAAAGATGGAAAAGCAGCAGTGGCAAAGCAGAGGGCAGAGGTaGCAGGCCCCCTGTGACATT | + |
|
Preference number: 2 (lower is better) Translates to: FSWLMGVRERKMEKQQWQSRGQR*QAPCDI Trigger: AATGTCACAGGGGGCCTGGCACCTCTGCCCTCTGCT...TTGCCACTGCTGCTTTTCCATCTTTCGCTCTCTTACACCCATAAGCCATGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGTGGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACACAGCTCAGACTTCCATaGCATGTGCTGTCACTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FCGKAVSGGCSEWCVHVTQLRLP*HVLSLR Trigger: CCTCAGTGACAGCACATGCCATGGAAGTCTGAGCTG...TGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTTTGGACTTCAGCTCTaGGCGACAATTCCTATCACA | + |
|
Preference number: 2 (lower is better) Translates to: FAHSWETGGMVEAHNKEDFGLQL*ATIPIT Trigger: TGTGATAGGAATTGTCGCCCAGAGCTGAAGTCCAAA...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATCAGGGAAGGCTGTGGTaGGAAGCCTGGCAAACGACT | + |
|
Preference number: 2 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHQGRLW*EAWQTT Trigger: AGTCGTTTGCCAGGCTTCTCACCACAGCCTTCCCTG...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCCAGAAGACCCAGGTTTaGTCCCCAGCACACAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: CRRPRFDPQHTTICNSSSQKTQV*SPAHNH Trigger: ATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTG...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGTTTCACCTGAGTCAGTaGTGTCCTGTAACCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKFHLSQ*CPVTSG Trigger: TCCAGAGGTTACAGGACAGCACTGACTCAGGTGAAA...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGAAGTCACCCACCCCACCCGCCAGATCAACTCTCAGGGACAAAAGTTTCATCATCAGAGCAGAGCTaGTACAGTCTTTTGGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TRSHPPHPPDQLSGTKVSSSEQS*YSLLVC Trigger: ACAGACCAAAAGACTGTAGCAGCTCTGCTCTGATGA...TGAAACTTTTGTCCCTGAGAGTTGATCTGGCGGGTGGGGTGGGTGACTTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGAAGTCACCCACCCCACCCGCCAGATCAACTCTCAGGGACAAAAGTTTCATCCTCACAGGAAATCTaGTGGAAGTGGTGTAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: TRSHPPHPPDQLSGTKVSSSQEI*WKWCNE Trigger: CTCATTACACCACTTCCAGCAGATTTCCTGTGAGGA...TGAAACTTTTGTCCCTGAGAGTTGATCTGGCGGGTGGGGTGGGTGACTTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTGGAAATAAACATGAGGAATGAGTGTTTAACCATGAATCAGGATGCACGTGCAGTGCTGGGTGTTTaGAGCGGTGGCCTGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LVEINMRNECLTMNQDARAVLGV*SGGLHR Trigger: CCTGTGCAGGCCACCGCTGCAAACACCCAGCACTGC...ACGTGCATCCTGATTCATGGTTAAACACTCATTCCTCATGTTTATTTCCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTCTGTGCAGACAGAGCGCCCTCCATTGATGATCACTAATCACTGCACGAGGCCTTTTTATGGCTTTTaGACTTCAGCTCTGGGCGAC | + |
|
Preference number: 2 (lower is better) Translates to: DSVQTERPPLMITNHCTRPFYGF*TSALGD Trigger: GTCGCCCAGAGCTGAAGTCCAAAAGCCATAAAAAGG...CCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTGCACAGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGCTTTCACCCAGCAAATACTGACCGACAGCCACTAACATCCTGGGCGCTATCCATTTCCAGTCTCTaGGTGGACTTGGGACAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SSFHPANTDRQPLTSWALSISSL*VDLGQY Trigger: ATACTGTCCCAAGTCCACCCAGAGACTGGAAATGGA...TAGCGCCCAGGATGTTAGTGGCTGTCGGTCAGTATTTGCTGGGTGAAAGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CAA 90 bp | CTAAGTTGTCATCAGAGCAGAGCTGCTACAGTCTTTTGGTCTGTTTaGTGGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSCHQSRAATVFWSV*WESSVWRVFRVVCA Trigger: TGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGCTCTGCTCTGATGACAACTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCGACTGTCTCCAGCAGTaGCTTGCTTCTTTTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CRRPRFDPQHTTICNSSSDCLQQ*LASFLW Trigger: CCAGAGAAAAGAAGCAAGTCACTGCTGGAGACAGTC...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATAATATGAATCAAAACTaGGTCCATCTGCATGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FAHSWETGGMVEAHNKEDNMNQN*VHLHGS Trigger: AGAGCCATGCAGATGGACTCAGTTTTGATTCATATT...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATTTTAGGAAGGTGCTCTaGAACTGGGGACCCTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHFRKVL*NWGPWS Trigger: GCTCCAGGGTCCCCAGTTTCAGAGCACCTTCCTAAA...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTTACTGCTGCCACCAATaGCAGCCTATACTTCTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSAYCCHQ*QPILLN Trigger: ATTTAGAAGTATAGGCTGTCATTGGTGGCAGCAGTA...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCGAGTACTCCTCTCTCTaGATGGGAGCAAGGATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: CRRPRFDPQHTTICNSSSEYSSL*MGARMH Trigger: ATGCATCCTTGCTCCCATGCAGAGAGAGGAGTACTC...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAACAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTGAGTCCCATCTCATCTTCAACCAAAGCCTaGCTATTTGGTGACACACAG | + |
|
Preference number: 2 (lower is better) Translates to: ITASTKTRLDRVELSPISSSTKA*LFGDTQ Trigger: CTGTGTGTCACCAAATAGGCAGGCTTTGGTTGAAGA...TGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TACGCACTGACTGCTGGTCAGAGACTCCAAAGAATAAACACCATTGAGCTGACCCTTGCTTCTTTTCTCTaGCACACATGGGAACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: YALTAGQRLQRINTIELTLASFL*HTWEPG Trigger: CCCAGGTTCCCATGTGTGCCAGAGAAAAGAAGCAAG...GGTCAGCTCAATGGTGTTTATTCTTTGGAGTCTCTGACCAGCAGTCAGTGCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | AATCAAACTCCAAGAGAGACTTGGAGAGTAAGTTCAACCAGTTGTCTTGCGTATTGCTGGCTGAAGAGATaGAGCTGGGGCAGGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: NQTPRETWRVSSTSCLAYCWLKR*SWGRGL Trigger: CAGTCCCCTGCCCCAGCTCCATCTCTTCAGCCAGCA...ATACGCAAGACAACTGGTTGAACTTACTCTCCAAGTCTCTCTTGGAGTTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATAGACTGGGGGCATGGTaGAGGCACACAACAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHRLGAW*RHTTRK Trigger: CTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCT...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTCCATCTGCATGGCTCTaGACCATGCTCAGAGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FRSGNVGNLANSLWQSYAPSAWL*TMLRGE Trigger: CTCCCCTCTGAGCATGGTTCAGAGCCATGCAGATGG...AGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | AATCAAACTCCAAGAGAGACTTGGAGAGTAAGTTCAACCAGTTGTCTTGCGTATCAGGGAAGGCTGTGGTaGGAAGCCTGGCAAACGACT | + |
|
Preference number: 2 (lower is better) Translates to: NQTPRETWRVSSTSCLAYQGRLW*EAWQTT Trigger: AGTCGTTTGCCAGGCTTCTCACCACAGCCTTCCCTG...ATACGCAAGACAACTGGTTGAACTTACTCTCCAAGTCTCTCTTGGAGTTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCACTCAGGCCCCTTCACTaGATTCCTTTTTATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GDWGHGGGTQQGRLKTEALRPLH*IPFYGF Trigger: AAAGCCATAAAAAGGAATTCAGTGAAGGGGCCTGAG...TGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGGCAGCCTGCACTCTGTaGATAACAGCTTCCACGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FSKSSFTILQIKQFPQGLAACTL*ITASTK Trigger: CTTCGTGGAAGCTGTTATTCACAGAGTGCAGGCTGC...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCCCTGCTTTAGGAAGGTaGTCTGAAACTGGGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: VFPRAASPYCKSNNSHKAPALGR*SETGDP Trigger: AGGGTCCCCAGTTTCAGAGCACCTTCCTAAAGCAGG...GGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGCTTTATCAGCCTGGGCATaGTATCCCAACAGCTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HDNGIQPQISLPPLPSSALSAWA*YPNSSL Trigger: AAGGGAGCTGTTGGGATAGCATGCCCAGGCTGATAA...AGCAGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGCTGAGTACTCCTCTCTCTaGATGGGAGCAAGGATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HDNGIQPQISLPPLPSSAEYSSL*MGARMH Trigger: ATGCATCCTTGCTCCCATGCAGAGAGAGGAGTACTC...AGCAGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGAGTACTCCTCTCTCTaGATGGGAGCAAGGATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: WHDNGIQPQISLPPLPSSEYSSL*MGARMH Trigger: ATGCATCCTTGCTCCCATGCAGAGAGAGGAGTACTC...AGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATGGACAAAATGGTTTCTaGCCTTTCCAATGTCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: FAHSWETGGMVEAHNKEDGQNGF*PFQCQI Trigger: TATTTGACATTGGAAAGGGCAGAAACCATTTTGTCC...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TACGCACTGACTGCTGGTCAGAGACTCCAAAGAATAAACACCATTGAGCTGACCTTTCACCTGAGTCAGTaGTGTCCTGTAACCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: YALTAGQRLQRINTIELTFHLSQ*CPVTSG Trigger: TCCAGAGGTTACAGGACAGCACTGACTCAGGTGAAA...GGTCAGCTCAATGGTGTTTATTCTTTGGAGTCTCTGACCAGCAGTCAGTGCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAATTAGTCTGTCCCTCTCTCCCTaGCAGCTCCAGGGCAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SFSHNVSWHDNGIQPQISLSLSP*QLQGSY Trigger: GTAGCTGCCCTGGAGCTGGCAGGGAGAGAGGGACAG...ACTAATTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCAGTCATAATGTCAGCTaGCATGATAATGGAATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVSHNVS*HDNGIQ Trigger: TTGAATTCCATTATCATGCCAGCTGACATTATGACT...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGGACTGTCTCCAGCAGTaGCTTGCTTCTTTTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSKSSFTILQIKQFPQGLDCLQQ*LASFLW Trigger: CCAGAGAAAAGAAGCAAGTCACTGCTGGAGACAGTC...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCCTCAGGCCCCTTCACTaGATTCCTTTTTATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CRRPRFDPQHTTICNSSSLRPLH*IPFYGF Trigger: AAAGCCATAAAAAGGAATTCAGTGAAGGGGCCTGAG...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTGGACAAAATGGTTTCTaGCCTTTCCAATGTCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: PQPVFSLYKDETQLALSAGQNGF*PFQCQI Trigger: TATTTGACATTGGAAAGGGCAGAAACCATTTTGTCC...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGCTTGCTTCTTTTCTCTaGCACACATGGGAACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FSKSSFTILQIKQFPQGLLASFL*HTWEPG Trigger: CCCAGGTTCCCATGTGTGCCAGAGAAAAGAAGCAAG...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAATTAGTTGCTGGCTGAAGAGATaGAGCTGGGGCAGGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: SFSHNVSWHDNGIQPQISCWLKR*SWGRGL Trigger: CAGTCCCCTGCCCCAGCTCCATCTCTTCAGCCAGCA...ACTAATTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGACTAGTAGGACAAAATaGTTTCTGCCCTTTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKTSRTK*FLPFPM Trigger: CATTGGAAAGGGCAGAAACCATTTTGTCCTACTAGT...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCTTACGCACTGACTGCTaGTCAGAGACTCCAAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: CRRPRFDPQHTTICNSSSLRTDC*SETPKN Trigger: ATTCTTTGGAGTCTCTGACCAGCAGTCAGTGCGTAA...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTCCAGAAGTACACATaGTTTTCATGGCTTATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GDWGHGGGTQQGRLKTEAFQKYT*FSWLMG Trigger: ACCCATAAGCCATGAAAATCATGTGTACTTCTGGAA...TGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGACAGAAAAGGCAGAGTaGACAAGCAAACAGCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: FSKSSFTILQIKQFPQGLTEKAE*TSKQQP Trigger: AGGCTGCTGTTTGCTTGTTCACTCTGCCTTTTCTGT...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATCTACTGGTCACGTCTTaGTCCTGCTGTAAGAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHLLVTS*SCCKSY Trigger: GTAACTCTTACAGCAGGATCAAGACGTGACCAGTAG...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCCTACTGGTCACGTCTTaGTCCTGCTGTAAGAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: VFPRAASPYCKSNNSHKALLVTS*SCCKSY Trigger: GTAACTCTTACAGCAGGATCAAGACGTGACCAGTAG...GGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | AATCAAACTCCAAGAGAGACTTGGAGAGTAAGTTCAACCAGTTGTCTTGCGTATGAGCAGTTATCAGCCTaGGCATGCTATCCCAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: NQTPRETWRVSSTSCLAYEQLSA*ACYPNS Trigger: GCTGTTGGGATAGCATGCCCAGGCTGATAACTGCTC...ATACGCAAGACAACTGGTTGAACTTACTCTCCAAGTCTCTCTTGGAGTTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCAACTAGTAGGACAAAATaGTTTCTGCCCTTTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: GDWGHGGGTQQGRLKTEATSRTK*FLPFPM Trigger: CATTGGAAAGGGCAGAAACCATTTTGTCCTACTAGT...TGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | AATCAAACTCCAAGAGAGACTTGGAGAGTAAGTTCAACCAGTTGTCTTGCGTATGACTGTCTCCAGCAGTaGCTTGCTTCTTTTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NQTPRETWRVSSTSCLAYDCLQQ*LASFLW Trigger: CCAGAGAAAAGAAGCAAGTCACTGCTGGAGACAGTC...ATACGCAAGACAACTGGTTGAACTTACTCTCCAAGTCTCTCTTGGAGTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTGGAAATAAACATGAGGAATGAGTGTTTAACCATGAATCAGGATGCACGTACCCCCAGTTATCCCTaGCATTCCATCTGTTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LVEINMRNECLTMNQDARTPSYP*HSICCT Trigger: AGTGCAACAGATGGAATGTCAGGGATAACTGGGGGT...ACGTGCATCCTGATTCATGGTTAAACACTCATTCCTCATGTTTATTTCCACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATAAAACTGAGTCCATCTaGATGGCTCTGAACCATGCT | + |
|
Preference number: 2 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHKTESI*MALNHA Trigger: AGCATGGTTCAGAGCCATGCAGATGGACTCAGTTTT...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGTCTTCAACCAAAGCCTaGCTATTTGGTGACACACAG | + |
|
Preference number: 2 (lower is better) Translates to: FSKSSFTILQIKQFPQGLSSTKA*LFGDTQ Trigger: CTGTGTGTCACCAAATAGGCAGGCTTTGGTTGAAGA...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATCTTGAGGCCTACGGATaGCCTAAAGAAACACAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHLEAYG*PKETQN Trigger: GTTTTGTGTTTCTTTAGGGCATCCGTAGGCCTCAAG...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATTTTGGACTTCAGCTCTaGGCGACAATTCCTATCACA | + |
|
Preference number: 2 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHFGLQL*ATIPIT Trigger: TGTGATAGGAATTGTCGCCCAGAGCTGAAGTCCAAA...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCGCTGCTACAGTCTTTTaGTCTGTTTTGTGGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VFPRAASPYCKSNNSHKAAATVF*SVLWES Trigger: GCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGC...GGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGGCTGCTACAGTCTTTTaGTCTGTTTTGTGGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FSKSSFTILQIKQFPQGLAATVF*SVLWES Trigger: GCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGC...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTCAACAGCGAAAGGTCTaGCAAGCTCTGAATGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: FRSGNVGNLANSLWQSYAQQRKV*QALNVG Trigger: TCCCACATTCAGAGCTTGCCAGACCTTTCGCTGTTG...AGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTAATATGAATCAAAACTaGGTCCATCTGCATGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: WHDNGIQPQISLPPLPSSNMNQN*VHLHGS Trigger: AGAGCCATGCAGATGGACTCAGTTTTGATTCATATT...AGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCAGGGAGAAGAAACATCACAGAATGTTGTTCAACAACACCATCTTTATTCGAGGCAAGCTTCTCTTaGAAGCTTCCAGAAGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: EAGRRNITECCSTTPSLFEASFS*KLPEVH Trigger: GTGTACTTCTGGAAGCTTTCAAGAGAAGCTTGCCTC...GAATAAAGATGGTGTTGTTGAACAACATTCTGTGATGTTTCTTCTCCCTGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTACTAGACGTAAAAATCGCAACTACATCATTCAGTCATAATGTCAGCTGGAGGTCTGGCAAGCTCTaGATGTGGGACTTGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SLLDVKIATTSFSHNVSWRSGKL*MWDLSS Trigger: GGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCT...CCAGCTGACATTATGACTGAATGATGTAGTTGCGATTTTTACGTCTAGTAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTGGAAATAAACATGAGGAATGAGTGTTTAACCATGAATCAGGATGCACGTCTATTCTGGAAGCAGTaGGTGTTTCAGAGATGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: LVEINMRNECLTMNQDARLFWKQ*VFQRCV Trigger: CACGCATCTCTGAAACACTCACTGCTTCCAGAATAG...ACGTGCATCCTGATTCATGGTTAAACACTCATTCCTCATGTTTATTTCCACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGAAAACTGAGTCCATCTaGATGGCTCTGAACCATGCT | + |
|
Preference number: 2 (lower is better) Translates to: LDQEMSAIWQTLCGKAMLKTESI*MALNHA Trigger: AGCATGGTTCAGAGCCATGCAGATGGACTCAGTTTT...CAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACATCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAATTGGCAAACTCTTTGTaGCAAAGCTATGCTGCCGAC | + |
|
Preference number: 2 (lower is better) Translates to: LHHSVIMSAGMIMEFNPKLANSL*QSYAAD Trigger: GTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAA...TTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGATGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCGAAATGTCGGCAATTTaGCAAACTCTTTGTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VFPRAASPYCKSNNSHKAEMSAI*QTLCGK Trigger: TTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTC...GGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGCAGGGAGAAGAAACATCACAGAATGTTGTTCAACAACACCATCTTTATTCTTCCAGAAGTACACATaGTTTTCATGGCTTATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: EAGRRNITECCSTTPSLFFQKYT*FSWLMG Trigger: ACCCATAAGCCATGAAAATCATGTGTACTTCTGGAA...GAATAAAGATGGTGTTGTTGAACAACATTCTGTGATGTTTCTTCTCCCTGCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCAGGGAGAAGAAACATCACAGAATGTTGTTCAACAACACCATCTTTATTCGGACAAAATGGTTTCTaGCCTTTCCAATGTCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: EAGRRNITECCSTTPSLFGQNGF*PFQCQI Trigger: TATTTGACATTGGAAAGGGCAGAAACCATTTTGTCC...GAATAAAGATGGTGTTGTTGAACAACATTCTGTGATGTTTCTTCTCCCTGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACATCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAAGAAATGTCGGCAATTTaGCAAACTCTTTGTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LHHSVIMSAGMIMEFNPKEMSAI*QTLCGK Trigger: TTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTC...TTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGATGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTACTAGACGTAAAAATCGCAACTACATCATTCAGTCATAATGTCAGCTGGACTAGTAGGACAAAATaGTTTCTGCCCTTTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: SLLDVKIATTSFSHNVSWTSRTK*FLPFPM Trigger: CATTGGAAAGGGCAGAAACCATTTTGTCCTACTAGT...CCAGCTGACATTATGACTGAATGATGTAGTTGCGATTTTTACGTCTAGTAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR GCA 72 bp | AAGTACGGGCAGTGCTGGGTGTTTGCAGCGGTGGCCTaGACAGGTGAGCTGCAGCTGGGCAGTCTGGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: KYGQCWVFAAVA*TGELQLGSLGP Trigger: TGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCGCTGCAAACACCCAGCACTGCCCGTACTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CCA 72 bp | CGGTGGCCTGCACAGGTGAGCTGCAGCTGGGCAGTCTaGGACCAATCTCAGCATGCAGTAGGCCCATGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RWPAQVSCSWAV*DQSQHAVGPWG Trigger: TCCCCATGGGCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR TCA 72 bp | GGGGACCCTGGAGCAATGTGGCAGGGAAGGCTGTGGTaGGAAGCCTGGCAAACGACTTGTGAGCCCTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GDPGAMWQGRLW*EAWQTTCEPCH Trigger: GTGGCAGGGCTCACAAGTCGTTTGCCAGGCTTCTCACCACAGCCTTCCCTGCCACATTGCTCCAGGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR GCA 72 bp | GCTGGGTGTTTGCAGCGGTGGCCTGCACAGGTGAGCTaGAGCTGGGCAGTCTGGGACCAATCTCAGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: AGCLQRWPAQVS*SWAVWDQSQHA Trigger: TGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCGCTGCAAACACCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR TCA 72 bp | TTCTGCGGCGCTGGAAGGAACACGGCTGTCAGCAAGTaGAGTACGGGCAGTGCTGGGTGTTTGCAGCGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FCGAGRNTAVSK*STGSAGCLQRW Trigger: CCACCGCTGCAAACACCCAGCACTGCCCGTACTTCACTTGCTGACAGCCGTGTTCCTTCCAGCGCCGCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR GCA 72 bp | CAGACTCCAGCTGTGGAGCAGTTATCAGCCTGGGCATaGTATCCCAACAGCTCCCTTCCCAGCCCCAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QTPAVEQLSAWA*YPNSSLPSPRG Trigger: TCCCCTGGGGCTGGGAAGGGAGCTGTTGGGATAGCATGCCCAGGCTGATAACTGCTCCACAGCTGGAGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | AGAGCCCAGACTCCAGCTGTGGAGCAGTTATCAGCCTaGGCATGCTATCCCAACAGCTCCCTTCCCAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RAQTPAVEQLSA*ACYPNSSLPSP Trigger: GGGGCTGGGAAGGGAGCTGTTGGGATAGCATGCCCAGGCTGATAACTGCTCCACAGCTGGAGTCTGGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | TGTTTGCAGCGGTGGCCTGCACAGGTGAGCTGCAGCTaGGCAGTCTGGGACCAATCTCAGCATGCAGTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CLQRWPAQVSCS*AVWDQSQHAVG Trigger: GCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCGCTGCAAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR GCA 72 bp | GAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCATaGAGTAGGCCCATGGGGACACAGGGAGACAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: ELQLGSLGPISA*SRPMGTQGDRI Trigger: AATCCTGTCTCCCTGTGTCCCCATGGGCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CCA 72 bp | GGGATGGTATCAGTCCCATGGCCTGGATTGGCAGTGTaGACATTCTGCGGCGCTGGAAGGAACACGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GMVSVPWPGLAV*TFCGAGRNTAV Trigger: GACAGCCGTGTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CCA 72 bp | CCAGGGTGTGCTTCTGGGCCGCTGGGACAACAACTATaGGGATGGTATCAGTCCCATGGCCTGGATTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PGCASGPLGQQL*GWYQSHGLDWQ Trigger: CTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCCCAGAAGCACACCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR TCA 72 bp | CAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTaGGTCCCATCTCATAGCAGGTGGGGCGGCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLPRRPGWTEWN*VPSHSRWGGFF Trigger: GAAGAAGCCGCCCCACCTGCTATGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | GTGGCAAAGCTATGCTGCCGACCTTGTGAGCAATGGTaGCCAGGAAAGCCCAATCCCTGCAGCCTGAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VAKLCCRPCEQW*PGKPNPCSLSP Trigger: AGGACTCAGGCTGCAGGGATTGGGCTTTCCTGGCCACCATTGCTCACAAGGTCGGCAGCATAGCTTTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | ATGGCCTGGATTGGCAGTGTGGACATTCTGCGGCGCTaGAAGGAACACGGCTGTCAGCAAGTGAAGTACGGG | + |
|
Preference number: 3 (lower is better) Translates to: MAWIGSVDILRR*KEHGCQQVKYG Trigger: CCCGTACTTCACTTGCTGACAGCCGTGTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAATCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCAGAAGTTCGCACACAGTaGGGAGACTGGGGGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GIQCHLLASTGTWHVHGAEVRTQ*GDWGHG Trigger: ACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTC...TGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGATTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | TGTGCTTCTGGGCCGCTGGGACAACAACTATGGGGATaGTATCAGTCCCATGGCCTGGATTGGCAGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CASGPLGQQLWG*YQSHGLDWQCG Trigger: TCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCCCAGAAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CCA 72 bp | TTCAGAGTGGTGTGTGCATGTGACAGTAAAGTGGCGTaGTGTGTAGGGAGGTGTTCCGCAGCAGAGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FRVVCACDSKVA*CVGRCSAAETG Trigger: CCCTGTCTCTGCTGCGGAACACCTCCCTACACACCACGCCACTTTACTGTCACATGCACACACCACTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | CAGGCCCCCTGTGACATTAGGCAACAGCGAAAGGTCTaGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: QAPCDIRQQRKV*QALNVGLEFLA Trigger: CGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTGTTGCCTAATGTCACAGGGGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCAAGGATGAAACCCAGTaGGCGCTCTCTGCTACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVKDETQ*ALSATV Trigger: TACTGTAGCAGAGAGCGCCAACTGGGTTTCATCCTT...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCACCTGTCCTAGTCAGTaGAAAAGAGGTCACCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVTCPSQ*KRGHQQ Trigger: CTGCTGGTGACCTCTTTTCAACTGACTAGGACAGGT...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | ACAGCGAAAGGTCTGGCAAGCTCTGAATGTGGGACTTaGGTTCCTTGCGGACCTGGGTTACTCGAGCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TAKGLASSECGT*VPCGPGLLEQA Trigger: AGCTTGCTCGAGTAACCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| 3UTR GCA 72 bp | CGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTaGCGACCTTGTGAGCAATGGTGGCCAGGAAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RQFGKLFVAKLC*RPCEQWWPGKP Trigger: GGGCTTTCCTGGCCACCATTGCTCACAAGGTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR GCA 72 bp | GTTCCGCAGCAGAGACAGGGGTTTCACCTGAGTCAGTaGTGTCCTGTAACCTCTGGAGAAAAGGATGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VPQQRQGFHLSQ*CPVTSGEKDAD Trigger: GTCAGCATCCTTTTCTCCAGAGGTTACAGGACAGCACTGACTCAGGTGAAACCCCTGTCTCTGCTGCGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR GCA 72 bp | GCCAGTGTGGGTGTTTGTGAAACTCAAATCACTCCATaGCACTTGGGAGTGACCCTGGATTCACAGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASVGVCETQITP*HLGVTLDSQGR Trigger: CCTGCCCTGTGAATCCAGGGTCACTCCCAAGTGGCATGGAGTGATTTGAGTTTCACAAACACCCACACTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR TCA 72 bp | GGCAGAGTGAACAAGCAAACAGCAGCCTGCACTCTGTaGATAACAGCTTCCACGAAGACCAGGCTGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRVNKQTAACTL*ITASTKTRLDR Trigger: TCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTATTCACAGAGTGCAGGCTGCTGTTTGCTTGTTCACTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | GACGGGGCCGGACTGGAGCACACAGGCCTTATGAGCTaGAGACCAGAATTTGGATTCTATTCTGGAAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: DGAGLEHTGLMS*RPEFGFYSGSS Trigger: ACTGCTTCCAGAATAGAATCCAAATTCTGGTCTTCAGCTCATAAGGCCTGTGTGCTCCAGTCCGGCCCCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR TCA 72 bp | GGACAGACGGGGCCGGACTGGAGCACACAGGCCTTATaGGCTGAAGACCAGAATTTGGATTCTATTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GQTGPDWSTQAL*AEDQNLDSILE Trigger: TTCCAGAATAGAATCCAAATTCTGGTCTTCAGCTCATAAGGCCTGTGTGCTCCAGTCCGGCCCCGTCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR GCA 72 bp | GTTGATTACAGGTCAACTGCAATGATGACCAGGGTGTaGTTCTGGGCCGCTGGGACAACAACTATGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: VDYRSTAMMTRV*FWAAGTTTMGM Trigger: CATCCCCATAGTTGTTGTCCCAGCGGCCCAGAAGCACACCCTGGTCATCATTGCAGTTGACCTGTAATCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGCAGTGACTTGCTTCTTTTCTCTGGCACACATGGGAACCTGGGGCATGGTCTCCAGCAGTGACTaGCTTCTTTTCTCTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SPAVTCFFSLAHMGTWGMVSSSD*LLFSGT Trigger: TGTGCCAGAGAAAAGAAGCAAGTCACTGCTGGAGAC...CATGCCCCAGGTTCCCATGTGTGCCAGAGAAAAGAAGCAAGTCACTGCTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATAGTCTTTTGGTCTGTTTaGTGGGAAAGCAGTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SNATFWPLQAPGMYMVHIVFWSV*WESSVW Trigger: CCAGACACTGCTTTCCCACAAAACAGACCAAAAGAC...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | TGTTTCAGAGATGCGTGGGGCCAGTGTGGGTGTTTGTaGAACTCAAATCACTCCATGCCACTTGGGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CFRDAWGQCGCL*NSNHSMPLGSD Trigger: GTCACTCCCAAGTGGCATGGAGTGATTTGAGTTTCACAAACACCCACACTGGCCCCACGCATCTCTGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR GCA 72 bp | TGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATaGTGCCGACCTTGTGAGCAATGGTGGCCAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CRQFGKLFVAKL*CRPCEQWWPGK Trigger: CTTTCCTGGCCACCATTGCTCACAAGGTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | AAGTCCAGTCACCATGCTGTGGATGCGTCCACATGGTaGCGTTATTGTAAGCTTCAGGGTGAGAGCAACATG | + |
|
Preference number: 3 (lower is better) Translates to: KSSHHAVDASTW*RYCKLQGESNM Trigger: CATGTTGCTCTCACCCTGAAGCTTACAATAACGCCACCATGTGGACGCATCCACAGCATGGTGACTGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | CAGAGCAGAGCTGCTACAGTCTTTTGGTCTGTTTTGTaGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QSRAATVFWSVL*ESSVWRVFRVV Trigger: CACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGCTCTGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | TGTAATTCCAGTTCCAAGGAATCCAATGCCACCTTCTaGCCTCTACAGGCACCTGGCATGTACATGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CNSSSKESNATF*PLQAPGMYMVH Trigger: GTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGATTCCTTGGAACTGGAATTACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATAAACTCCAAGAGAGACTaGGAGAGTAAGTTCAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SNATFWPLQAPGMYMVHINSKRD*ESKFNQ Trigger: CTGGTTGAACTTACTCTCCAAGTCTCTCTTGGAGTT...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | AAGGCCAGCTCAGACTTCCATGGCATGTGCTGTCACTaGGGCAAGCTTCTCTTGAAAGCTTCCAGAAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KASSDFHGMCCH*GKLLLKASRST Trigger: TGTACTTCTGGAAGCTTTCAAGAGAAGCTTGCCTCAGTGACAGCACATGCCATGGAAGTCTGAGCTGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR GCA 72 bp | CTCATAGCAGGTGGGGCGGCTTCTTCAACCAAAGCCTaGCTATTTGGTGACACACAGATTTGCTTTAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LIAGGAASSTKA*LFGDTQICFNV Trigger: CACGTTAAAGCAAATCTGTGTGTCACCAAATAGGCAGGCTTTGGTTGAAGAAGCCGCCCCACCTGCTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | AAATATGAATCAAAACTGAGTCCATCTGCATGGCTCTaGACCATGCTCAGAGGGGAGCCGGAGGAGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KYESKLSPSAWL*TMLRGEPEESK Trigger: CTTACTCTCCTCCGGCTCCCCTCTGAGCATGGTTCAGAGCCATGCAGATGGACTCAGTTTTGATTCATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | CTGCAAATCAAACAATTCCCACAAGGCCTGCTGGTGTaGCTGAAAAGACTGCAACCAAAGGCCTCTCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LQIKQFPQGLLV*LKRLQPKASQD Trigger: GTCTTGAGAGGCCTTTGGTTGCAGTCTTTTCAGTCACACCAGCAGGCCTTGTGGGAATTGTTTGATTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR GCA 72 bp | CAGACAGAGCGCCCTCCATTGATGATCACTAATCACTaGACGAGGCAGGGAGAAGAAACATCACAGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: QTERPPLMITNH*TRQGEETSQNV Trigger: AACATTCTGTGATGTTTCTTCTCCCTGCCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | ACAGTCTTTTGGTCTGTTTTGTGGGAAAGCAGTGTCTaGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TVFWSVLWESSV*RVFRVVCACDS Trigger: ACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAACAGACCAAAAGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGTCTCCAGCAGTGACTaGCTTCTTTTCTCTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: WHDNGIQPQISLPPLPSSVSSSD*LLFSGT Trigger: TGTGCCAGAGAAAAGAAGCAAGTCACTGCTGGAGAC...AGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCAAATTTGGCAAACTCTTaGTGGCAAAGCTATGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GDWGHGGGTQQGRLKTEANLANS*WQSYAA Trigger: GGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATT...TGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCGTCTTTTGGTCTGTTTaGTGGGAAAGCAGTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CRRPRFDPQHTTICNSSSVFWSV*WESSVW Trigger: CCAGACACTGCTTTCCCACAAAACAGACCAAAAGAC...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGAGTTGTTTGAGTACTCCTCTCTCTGCATGGGAGCAAGGATGCATATAAATTTGGCAAACTCTTaGTGGCAAAGCTATGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GGELFEYSSLCMGARMHINLANS*WQSYAA Trigger: GGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATT...TATATGCATCCTTGCTCCCATGCAGAGAGAGGAGTACTCAAACAACTCACCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCACTTCGAATCTTACTGTaGGATTCTCTAGAATGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: GDWGHGGGTQQGRLKTEALRILL*DSLECS Trigger: CGAGCATTCTAGAGAATCCAACAGTAAGATTCGAAG...TGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGCACTGACTGCTGGTCAGAGACTCCAAAGAATAAACACCATTGAGCTGACCAGCTGCTACAGTCTTTaGGTCTGTTTTGTGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YALTAGQRLQRINTIELTSCYSL*VCFVGK Trigger: CTTTCCCACAAAACAGACCAAAAGACTGTAGCAGCT...GGTCAGCTCAATGGTGTTTATTCTTTGGAGTCTCTGACCAGCAGTCAGTGCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CCA 72 bp | AGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTaGCAAAGCTATGCTGCCGACCTTGTGAGCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSGNVGNLANSL*QSYAADLVSNG Trigger: ACCATTGCTCACAAGGTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | CTGATAGTGAACTTGGACTTCAGCTGCAGGTGGTCTTaGTGGACCACCATTACTAAAAAGGAAGTCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LIVNLDFSCRWS*WTTITKKEVLC Trigger: GCAAAGGACTTCCTTTTTAGTAATGGTGGTCCATCAAGACCACCTGCAGCTGAAGTCCAAGTTCACTATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR TCA 72 bp | GAGGAGACAGACTCTGGTGGAAATAAACATGAGGAATaGGTGTTTAACCATGAATCAGGATGCACGTGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: EETDSGGNKHEE*VFNHESGCTCR Trigger: ACGGCACGTGCATCCTGATTCATGGTTAAACACTCATTCCTCATGTTTATTTCCACCAGAGTCTGTCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGAATTTGGCAAACTCTTaGTGGCAAAGCTATGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LDQEMSAIWQTLCGKAMLNLANS*WQSYAA Trigger: GGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATT...CAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR GCA 72 bp | TTATTTTCCGTTTTTCCAAGAGCAGCTTCACCATACTaGAAATCAAACAATTCCCACAAGGCCTGCTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LFSVFPRAASPY*KSNNSHKACWC Trigger: ACACCAGCAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAAACGGAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGGAAATAAACATGAGGAATGAGTGTTTAACCATGAATCAGGATGCACGTGCTGAAGACCAGAATTaGGATTCTATTCTGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LVEINMRNECLTMNQDARAEDQN*DSILEA Trigger: TGCTTCCAGAATAGAATCCAAATTCTGGTCTTCAGC...ACGTGCATCCTGATTCATGGTTAAACACTCATTCCTCATGTTTATTTCCACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CCA 72 bp | ACGAAACTAACTTCCTCACAGGAAATCTGCTGGAAGTaGTGTAATGAGGCCAACACATTCATTTACATAATC | + |
|
Preference number: 3 (lower is better) Translates to: TKLTSSQEICWK*CNEANTFIYII Trigger: GATTATGTAAATGAATGTGTTGGCCTCATTACACCACTTCCAGCAGATTTCCTGTGAGGAAGTTAGTTTCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAATTAGTCTTCGAATCTTACTGTaGGATTCTCTAGAATGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SFSHNVSWHDNGIQPQISLRILL*DSLECS Trigger: CGAGCATTCTAGAGAATCCAACAGTAAGATTCGAAG...ACTAATTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCATGCAGTAGGCCCAGGAGACGATGGGTCCTaGGTGCTTGCGGTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVSCSWAVWDQSQHAVGPGDDGS*VLAVVD Trigger: ATCCACCACCGCAAGCACGCAGGACCCATCGTCTCC...TGGGCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCGCCACACGGAGACGATaGGTCCTGCGTGCTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVATRRR*VLRACG Trigger: ACCGCAAGCACGCAGGACCCATCGTCTCCGTGTGGC...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAAGCATCCGAGCCAGCTaGCGCCGGTCTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: REVRTQLGDWGHGGGTQQSIRAS*RRSSSS Trigger: GGAACTGGAAGACCGGCGCCAGCTGGCTCGGATGCT...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCATCAGGGTCAGCATCCGAGCCAGCTaGCGCCGGTCTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQQLLQSTLSPEYSVIRVSIRAS*RRSSSS Trigger: GGAACTGGAAGACCGGCGCCAGCTGGCTCGGATGCT...GACCCTGATGACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCATCAGGGTCACGATGGGTCCTGCGTaGTTGCGGTGGTGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQQLLQSTLSPEYSVIRVTMGPA*LRWWMS Trigger: GCTCATCCACCACCGCAAGCACGCAGGACCCATCGT...GACCCTGATGACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | AACCATGAATCAGGATGCACGTGCCGTGGGAGCAGGATCTGTGAGTGTCTGAGCTTGCGGAGCTCGCGGTaGCACACGGAGACGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHESGCTCRGSRICECLSLRSSR*HTETMG Trigger: ACCCATCGTCTCCGTGTGGCACCGCGAGCTCCGCAA...GCTCAGACACTCACAGATCCTGCTCCCACGGCACGTGCATCCTGATTCATGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAATTGGCTCTGCTAGGAGACTGTCTTCCTCTGTCTCCTGAGCCCTTGGCTGCCACACGGAGACGATaGGTCCTGCGTGCTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQLALLGDCLPLSPEPLAATRRR*VLRACG Trigger: ACCGCAAGCACGCAGGACCCATCGTCTCCGTGTGGC...AGCCAAGGGCTCAGGAGACAGAGGAAGACAGTCTCCTAGCAGAGCCAATTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTGCCAGGCCCCCTGTGACATTAGGCAACAGCGAAAGGTCTGGCAAGCTACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRCQAPCDIRQQRKVWQATSCTS*GREAIF Trigger: GAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGT...AGCTTGCCAGACCTTTCGCTGTTGCCTAATGTCACAGGGGGCCTGGCACCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATAGCAGAGGGCAGAGGTaGCAGGCCCCCTGTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: FAHSWETGGMVEAHNKEDSRGQR*QAPCDI Trigger: AATGTCACAGGGGGCCTGGCACCTCTGCCCTCTGCT...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| CDS-3UTR CCA 90 bp | ACCAGAAGTCACCCACCCCACCCGCCAGATCAACTCTCAGGGACAAAAGTTTCAAGCATCCGAGCCAGCTaGCGCCGGTCTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRSHPPHPPDQLSGTKVSSIRAS*RRSSSS Trigger: GGAACTGGAAGACCGGCGCCAGCTGGCTCGGATGCT...TGAAACTTTTGTCCCTGAGAGTTGATCTGGCGGGTGGGGTGGGTGACTTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | GTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCTCCAGCATCCGAGCCAGCTaGCGCCGGTCTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTRASFCLYSCPSLPASSSIRAS*RRSSSS Trigger: GGAACTGGAAGACCGGCGCCAGCTGGCTCGGATGCT...GGAGCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGCACAGGTGAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCATGCAGCCTCTCTGGCAACATaGGAAAAAGCATCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPAQVSCSWAVWDQSQHAASLAT*EKASTS Trigger: GCTTGTGGATGCTTTTTCTCATGTTGCCAGAGAGGC...TGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | ATAACAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTGAGTCCCATCTCATTGCGGAGCTCGCGGTaGCACACGGAGACGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITASTKTRLDRVELSPISLRSSR*HTETMG Trigger: ACCCATCGTCTCCGTGTGGCACCGCGAGCTCCGCAA...TGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGTTGCGGAGCTCGCGGTaGCACACGGAGACGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKLRSSR*HTETMG Trigger: ACCCATCGTCTCCGTGTGGCACCGCGAGCTCCGCAA...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCGTCTTCCAGTTCCGCTaGCAGGCGCCCGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVVFQFR*QAPVIF Trigger: GAATATAACGGGCGCCTGGCAGCGGAACTGGAAGAC...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GATTGGCAGTGTGGACATTCTGCGGCGCTGGAAGGAACACGGCTGTCAGCAAGTAGAGTTGCTCAGCTCTaGGAGCTTCTTTTCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DWQCGHSAALEGTRLSASRVAQL*ELLFQR Trigger: GCGCTGGAAAAGAAGCTCTCAGAGCTGAGCAACTCT...ACTTGCTGACAGCCGTGTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAGATCTCAACCATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCGACAGTAGCATCCCCTaGCGCAGCATTTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SGRSQPFRTTAAASEHPVDSSIP*RSIFQI Trigger: GATCTGGAAAATGCTGCGTCAGGGGATGCTACTGTC...GACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATGGTTGAGATCTCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGACAGTAGCATCCCCTaGCGCAGCATTTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: REVRTQLGDWGHGGGTQQDSSIP*RSIFQI Trigger: GATCTGGAAAATGCTGCGTCAGGGGATGCTACTGTC...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRMYHYQPPGEDSVQTETSCTS*GREAIF Trigger: GAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGT...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGTGCTTCTGGGCCGCTGGGACAACAACTATGGGGATGGTATCAGTCCCATCGCTCTGCTGAGAGTTaGTCAGCTCTGAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCASGPLGQQLWGWYQSHRSAES*SALRAS Trigger: AGAAGCTCTCAGAGCTGAGCAACTCTCAGCAGAGCG...ATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCCCAGAAGCACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGAGTCAAGAGAGGGCCTaGAGAAGGGTCTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLRMYHYQPPGEDSVQTESQERA*RRVLGR Trigger: TCTCCCCAAGACCCTTCTGCAGGCCCTCTCTTGACT...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGAAAGGTCTGGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGGTCTTCCAGTTCCGCTaGCAGGCGCCCGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: QRKVWQALNVGLEFLADLVFQFR*QAPVIF Trigger: GAATATAACGGGCGCCTGGCAGCGGAACTGGAAGAC...CAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| 3UTR CAA 72 bp | TCCCTCCACTCCCTTCCTCTGCTGGAGGTGAGTTGTTaGAGTACTCCTCTCTCTGCATGGGAGCAAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHSLPLLEVSC*STPLSAWEQGC Trigger: GCATCCTTGCTCCCATGCAGAGAGAGGAGTACTCAAACAACTCACCTCCAGCAGAGGAAGGGAGTGGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | AGTCTCCCTCCACTCCCTTCCTCTGCTGGAGGTGAGTaGTTTGAGTACTCCTCTCTCTGCATGGGAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPPLPSSAGGE*FEYSSLCMGAR Trigger: CCTTGCTCCCATGCAGAGAGAGGAGTACTCAAACAACTCACCTCCAGCAGAGGAAGGGAGTGGAGGGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | CATGGGAACCTGGGGCATGATACCTGTCCTAGTCAGTaGAAAAGAGGTCACCAGCAGAGGGCAGAGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGNLGHDTCPSQ*KRGHQQRAEVP Trigger: TGGCACCTCTGCCCTCTGCTGGTGACCTCTTTTCAACTGACTAGGACAGGTATCATGCCCCAGGTTCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | ACAACTATGGGGATGGTATCAGTCCCATGGCCTGGATaGGCAGTGTGGACATTCTGCGGCGCTGGAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTMGMVSVPWPG*AVWTFCGAGRN Trigger: GTTCCTTCCAGCGCCGCAGAATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGAGAGTTGCTCAGCTCTaGGAGCTTCTTTTCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRMYHYQPPGEDSVQTERVAQL*ELLFQR Trigger: GCGCTGGAAAAGAAGCTCTCAGAGCTGAGCAACTCT...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATAGAGTTGCTCAGCTCTaGGAGCTTCTTTTCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FAHSWETGGMVEAHNKEDRVAQL*ELLFQR Trigger: GCGCTGGAAAAGAAGCTCTCAGAGCTGAGCAACTCT...ATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGTTCGCACACAGTTGGGAGACTGGGGGCATGGTGGAGGCACACAACAAGCCTCTCTGGCAACATaGGAAAAAGCATCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: REVRTQLGDWGHGGGTQQASLAT*EKASTS Trigger: GCTTGTGGATGCTTTTTCTCATGTTGCCAGAGAGGC...TTGTTGTGTGCCTCCACCATGCCCCCAGTCTCCCAACTGTGTGCGAACTTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GCGGTGGCCTGCACAGGTGAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCATCCTCTTGTATCTGCTaGAAAGTTCGTTTTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVACTGELQLGSLGPISASSCIC*KVRFRD Trigger: GTCTCTAAAACGAACTTTTCAGCAGATACAAGAGGA...TGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGAAAGGTCTGGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGGACAGTAGCATCCCCTaGCGCAGCATTTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QRKVWQALNVGLEFLADLDSSIP*RSIFQI Trigger: GATCTGGAAAATGCTGCGTCAGGGGATGCTACTGTC...CAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGYSSKLLFILLSLSPCQTSCTS*GREAIF Trigger: GAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGT...CTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCATGCAGTAGGCCCATTTACAGCCTTCATCTaGCTCTCTGGCAACATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSCSWAVWDQSQHAVGPFTAFI*LSGNMR Trigger: TCTCATGTTGCCAGAGAGGCAGATGAAGGCTGTAAA...TGGGCCTACTGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGAAAGGTCTGGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGATAGACAGCTTCAGCTaGTGTATGAACTCGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRKVWQALNVGLEFLADLIDSFS*CMNSPP Trigger: CGGCGGCGAGTTCATACAGCAGCTGAAGCTGTCTAT...CAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCAGTCAAGAGAGGGCCTaGAGAAGGGTCTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVTRASFCLYSCPSLPASSQERA*RRVLGR Trigger: TCTCCCCAAGACCCTTCTGCAGGCCCTCTCTTGACT...GCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | GCGGTGGCCTGCACAGGTGAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCAGCATTTTCCAGATCCTaGAAAGCTTTGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVACTGELQLGSLGPISAAFSRS*KALINS Trigger: GGAGTTAATCAAAGCTTTGCAGGATCTGGAAAATGC...TGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCGCCACACGGAGACGATaGGTCCTGCGTGCTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CRRPRFDPQHTTICNSSSATRRR*VLRACG Trigger: ACCGCAAGCACGCAGGACCCATCGTCTCCGTGTGGC...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCTCTCTTCTGCTGCTTTaGGGGGAGGGCTCTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WVTRASFCLYSCPSLPASSLLLL*GEGSWS Trigger: ACTCCAAGAGCCCTCCCCCCAAAGCAGCAGAAGAGA...GCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | ACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCTCCAGGTCTTCTCTTCTGCTTTaGGGGGAGGGCTCTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRASFCLYSCPSLPASSRSSLLL*GEGSWS Trigger: ACTCCAAGAGCCCTCCCCCCAAAGCAGAAGAGAAGA...CCTGGAGCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128206.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGAAAGGTCTGGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGCAGAAGGATACATTCTaGGGATCAGAGCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRKVWQALNVGLEFLADLQKDTF*GSEQGW Trigger: CCAGCCCTGCTCTGATCCCCAGAATGTATCCTTCTG...CAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| 3UTR CAA 72 bp | CCAGGGGAAGATTCTGTGCAGACAGAGCGCCCTCCATaGATGATCACTAATCACTGCACGAGGCAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGEDSVQTERPP*MITNHCTRQGE Trigger: TTCTCCCTGCCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTGCACAGAATCTTCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | CTGCTAGGAGACTGTCTTCCTCTGTCTCCTGAGCCCTaGGCTGTACCCCCAGTTATCCCTGACATTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGDCLPLSPEP*AVPPVIPDIPS Trigger: AGATGGAATGTCAGGGATAACTGGGGGTACAGCCAAGGGCTCAGGAGACAGAGGAAGACAGTCTCCTAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGAAGTCACCCACCCCACCCGCCAGATCAACTCTCAGGGACAAAAGTTTCAAGAGTTGCTCAGCTCTaGGAGCTTCTTTTCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TRSHPPHPPDQLSGTKVSRVAQL*ELLFQR Trigger: GCGCTGGAAAAGAAGCTCTCAGAGCTGAGCAACTCT...TGAAACTTTTGTCCCTGAGAGTTGATCTGGCGGGTGGGGTGGGTGACTTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAGTTCCTTGCGGACCTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGGCTTCAGCTGCTGTATaGACTCGCCGCCGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LEFLADLGYSSKLLFILLASAAV*TRRRTH Trigger: GTGTGTACGGCGGCGAGTTCATACAGCAGCTGAAGC...CAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAGGTCCGCAAGGAACTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR TCA 90 bp | TTGGATTCTATTCTGGAAGCAGTGAGTGTTTCAGAGATGCGTGGGGCCAGTGTGGCTTCAGCTGCTGTATaGACTCGCCGCCGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LDSILEAVSVSEMRGASVASAAV*TRRRTH Trigger: GTGTGTACGGCGGCGAGTTCATACAGCAGCTGAAGC...CACACTGGCCCCACGCATCTCTGAAACACTCACTGCTTCCAGAATAGAATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGCACAGGTGAGCTGCAGCTGGGCAGTCTGGGACCAATCTCAGCATGCAGATCCTGCAAAGCTTTaGTTAACTCCTCAGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPAQVSCSWAVWDQSQHADPAKL*LTPQSR Trigger: TCTTGACTGAGGAGTTAATCAAAGCTTTGCAGGATC...TGCATGCTGAGATTGGTCCCAGACTGCCCAGCTGCAGCTCACCTGTGCAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | CATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGCTTTGCGGAGCTCGCGGTaGCACACGGAGACGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HDNGIQPQISLPPLPSSALRSSR*HTETMG Trigger: ACCCATCGTCTCCGTGTGGCACCGCGAGCTCCGCAA...AGCAGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATAATAGACAGCTTCAGCTaGTGTATGAACTCGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SNATFWPLQAPGMYMVHIIDSFS*CMNSPP Trigger: CGGCGGCGAGTTCATACAGCAGCTGAAGCTGTCTAT...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCATAGACAGCTTCAGCTaGTGTATGAACTCGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TWVTRASFCLYSCPSLPAIDSFS*CMNSPP Trigger: CGGCGGCGAGTTCATACAGCAGCTGAAGCTGTCTAT...GGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGCTTTCACCCAGCAAATACTGACCGACAGCCACTAACATCCTGGGCGCTAAGTCAAGAGAGGGCCTaGAGAAGGGTCTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSFHPANTDRQPLTSWALSQERA*RRVLGR Trigger: TCTCCCCAAGACCCTTCTGCAGGCCCTCTCTTGACT...TAGCGCCCAGGATGTTAGTGGCTGTCGGTCAGTATTTGCTGGGTGAAAGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| 3UTR CAA 72 bp | GTGGGTGTTTGTGAAACTCAAATCACTCCATGCCACTaGGGAGTGACCCTGGATTCACAGGGCAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGVCETQITPCH*GVTLDSQGRFS Trigger: GCTGAACCTGCCCTGTGAATCCAGGGTCACTCCCAAGTGGCATGGAGTGATTTGAGTTTCACAAACACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCAGGCCCCCTGTGACATTAGGCAACAGCGAAAGGTCTGGCAAGCTCTGGATCCTGCAAAGCTTTaGTTAACTCCTCAGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCQAPCDIRQQRKVWQALDPAKL*LTPQSR Trigger: TCTTGACTGAGGAGTTAATCAAAGCTTTGCAGGATC...CAGAGCTTGCCAGACCTTTCGCTGTTGCCTAATGTCACAGGGGGCCTGGCACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR TCA 90 bp | CAACAACTATGGGGATGGTATCAGTCCCATGGCCTGGATTGGCAGTGTGGACATGACAGTAGCATCCCCTaGCGCAGCATTTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QQLWGWYQSHGLDWQCGHDSSIP*RSIFQI Trigger: GATCTGGAAAATGCTGCGTCAGGGGATGCTACTGTC...ATGTCCACACTGCCAATCCAGGCCATGGGACTGATACCATCCCCATAGTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCCTGGAGACTAGAAAGCAATGTTCAGTCCATTTCCAGTCTCTGGGTGGACACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSWRLESNVQSISSLWVDTSCTS*GREAIF Trigger: GAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGT...GTCCACCCAGAGACTGGAAATGGACTGAACATTGCTTTCTAGTCTCCAGGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | CATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGCTGGAGACGATGGGTCCTaGGTGCTTGCGGTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HDNGIQPQISLPPLPSSAGDDGS*VLAVVD Trigger: ATCCACCACCGCAAGCACGCAGGACCCATCGTCTCC...AGCAGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TGGCATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGGAGACGATGGGTCCTaGGTGCTTGCGGTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WHDNGIQPQISLPPLPSSGDDGS*VLAVVD Trigger: ATCCACCACCGCAAGCACGCAGGACCCATCGTCTCC...AGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | CACTCCCTTCCTCTGCTGGAGGTGAGTTGTTTGAGTACTCCTCTCTCTGCATGGTATTTGATTTGGCTTTaGGGAGCTCGCGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HSLPLLEVSCLSTPLSAWYLIWL*GARGAT Trigger: TGTGGCACCGCGAGCTCCGCAAAGCCAAATCAAATA...CCATGCAGAGAGAGGAGTACTCAAACAACTCACCTCCAGCAGAGGAAGGGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTTCTTTTCTCTGGCACACATGGGAACCTGGGGCATGATACCTGTCCTAGTCTTCCAGTTCCGCTaGCAGGCGCCCGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: TCFFSLAHMGTWGMIPVLVFQFR*QAPVIF Trigger: GAATATAACGGGCGCCTGGCAGCGGAACTGGAAGAC...TAGGACAGGTATCATGCCCCAGGTTCCCATGTGTGCCAGAGAAAAGAAGCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATTCTATTCTGGAAGCAGTGAGTGTTTCAGAGATGCGTGGGGCCAGTGTGTCTCTTCTGCTGCTTTaGGGGGAGGGCTCTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDSILEAVSVSEMRGASVSLLLL*GEGSWS Trigger: ACTCCAAGAGCCCTCCCCCCAAAGCAGCAGAAGAGA...CACACTGGCCCCACGCATCTCTGAAACACTCACTGCTTCCAGAATAGAATCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTGAGTCCCATCTCAAGTTCCTTGCGGACCTaGGTTACTCGAGCAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITASTKTRLDRVELSPISSSLRT*VTRASF Trigger: GAAGCTTGCTCGAGTAACCCAGGTCCGCAAGGAACT...TGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAACCAGTCTTCAGCCTATACAAGGATGAAACCCAGTTGGCGCTCTCTGCTCAACAGCGAAAGGTCTaGCAAGCTCTGAATGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQPVFSLYKDETQLALSAQQRKV*QALNVG Trigger: TCCCACATTCAGAGCTTGCCAGACCTTTCGCTGTTG...AGCAGAGAGCGCCAACTGGGTTTCATCCTTGTATAGGCTGAAGACTGGTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| CDS-3UTR TCA 90 bp | TGGCATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGCTTCAGCTGCTGTATaGACTCGCCGCCGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: WHDNGIQPQISLPPLPSSASAAV*TRRRTH Trigger: GTGTGTACGGCGGCGAGTTCATACAGCAGCTGAAGC...AGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | GGAATCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCATTTACAGCCTTCATCTaGCTCTCTGGCAACATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIQCHLLASTGTWHVHGAFTAFI*LSGNMR Trigger: TCTCATGTTGCCAGAGAGGCAGATGAAGGCTGTAAA...TGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTGCCAGGCCCCCTGTGACATTAGGCAACAGCGAAAGGTCTGGCAAGCTTACACACTTCGTTCTTaGCAGATGTTCAGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRCQAPCDIRQQRKVWQAYTLRS*QMFSNL Trigger: AAGATTGCTGAACATCTGGCAAGAACGAAGTGTGTA...AGCTTGCCAGACCTTTCGCTGTTGCCTAATGTCACAGGGGGCCTGGCACCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAATATAAGCCTGCCAGATTACAGTCATTTCCAGGGCCAGGCCCACTCTTTAGTCAAGAGAGGGCCTaGAGAAGGGTCTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKYKPARLQSFPGPGPLFSQERA*RRVLGR Trigger: TCTCCCCAAGACCCTTCTGCAGGCCCTCTCTTGACT...AAAGAGTGGGCCTGGCCCTGGAAATGACTGTAATCTGGCAGGCTTATATTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCGTCTTCCAGTTCCGCTaGCAGGCGCCCGTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: CRRPRFDPQHTTICNSSSVFQFR*QAPVIF Trigger: GAATATAACGGGCGCCTGGCAGCGGAACTGGAAGAC...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGCAACAGCGAAAGGTCTaGCAAGCTCTGAATGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKQQRKV*QALNVG Trigger: TCCCACATTCAGAGCTTGCCAGACCTTTCGCTGTTG...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| 3UTR CAA 72 bp | AACTCCAAGAGAGACTTGGAGAGTAAGTTCAACCAGTaGTCTTGCGTATGTACCACTACCAGCCCCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKRDLESKFNQ*SCVCTTTSPQG Trigger: CCCCTGGGGGCTGGTAGTGGTACATACGCAAGACAACTGGTTGAACTTACTCTCCAAGTCTCTCTTGGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGGCTTATGGGTGTAAGAGAGCGAAAGATGGAAAAGCAGCAGTGGCAAGCTTCAGCTGCTGTATaGACTCGCCGCCGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSWLMGVRERKMEKQQWQASAAV*TRRRTH Trigger: GTGTGTACGGCGGCGAGTTCATACAGCAGCTGAAGC...TTGCCACTGCTGCTTTTCCATCTTTCGCTCTCTTACACCCATAAGCCATGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATGCTTCAGCTGCTGTATaGACTCGCCGCCGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHASAAV*TRRRTH Trigger: GTGTGTACGGCGGCGAGTTCATACAGCAGCTGAAGC...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGTTCATCTACTGTTTTTaGAAGACGTTCAGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRMYHYQPPGEDSVQTEFIYCF*KTFSCL Trigger: GAGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAA...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTGGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACATATTTGATTTGGCTTTaGGGAGCTCGCGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FCGKAVSGGCSEWCVHVTYLIWL*GARGAT Trigger: TGTGGCACCGCGAGCTCCGCAAAGCCAAATCAAATA...TGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGTTTACAGCCTTCATCTaGCTCTCTGGCAACATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGYSSKLLFILLSLSPCQFTAFI*LSGNMR Trigger: TCTCATGTTGCCAGAGAGGCAGATGAAGGCTGTAAA...CTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAGATCTCAACCATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTACACACTTCGTTCTTaGCAGATGTTCAGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRSQPFRTTAAASEHPVYTLRS*QMFSNL Trigger: AAGATTGCTGAACATCTGGCAAGAACGAAGTGTGTA...GACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATGGTTGAGATCTCCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | GAATCGAATTCTCAGCAATTGGCTCTGCTAGGAGACTGTCTTCCTCTGTCTCCTATAGACAGCTTCAGCTaGTGTATGAACTCGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ESNSQQLALLGDCLPLSPIDSFS*CMNSPP Trigger: CGGCGGCGAGTTCATACAGCAGCTGAAGCTGTCTAT...AGGAGACAGAGGAAGACAGTCTCCTAGCAGAGCCAATTGCTGAGAATTCGATTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGCTTCATCTGCCTCTCTaGCAACATGAGAAAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLRMYHYQPPGEDSVQTELHLPL*QHEKKH Trigger: ATGCTTTTTCTCATGTTGCCAGAGAGGCAGATGAAG...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | CATCAGAGCAGAGCTGCTACAGTCTTTTGGTCTGTTTaGTGGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQSRAATVFWSV*WESSVWRVFRV Trigger: CACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGCTCTGCTCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATATTCATCTACTGTTTTTaGAAGACGTTCAGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNATFWPLQAPGMYMVHIFIYCF*KTFSCL Trigger: GAGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAA...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCTTCATCTACTGTTTTTaGAAGACGTTCAGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TWVTRASFCLYSCPSLPAFIYCF*KTFSCL Trigger: GAGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAA...GGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | TGGCATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTCGCTCTGCTGAGAGTTaGTCAGCTCTGAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WHDNGIQPQISLPPLPSSRSAES*SALRAS Trigger: AGAAGCTCTCAGAGCTGAGCAACTCTCAGCAGAGCG...AGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTCAGGGCTATTCATTCAAGCTTTCACCCAGCAAATACTGACCGACAGCCATATTTGATTTGGCTTTaGGGAGCTCGCGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLRAIHSSFHPANTDRQPYLIWL*GARGAT Trigger: TGTGGCACCGCGAGCTCCGCAAAGCCAAATCAAATA...TGGCTGTCGGTCAGTATTTGCTGGGTGAAAGCTTGAATGAATAGCCCTGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAATTGGCTCTGCTAGGAGACTGTCTTCCTCTGTCTCCTGAGCCCTTGGCTTACACACTTCGTTCTTaGCAGATGTTCAGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQLALLGDCLPLSPEPLAYTLRS*QMFSNL Trigger: AAGATTGCTGAACATCTGGCAAGAACGAAGTGTGTA...AGCCAAGGGCTCAGGAGACAGAGGAAGACAGTCTCCTAGCAGAGCCAATTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGAAAGGTCTGGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGGCATTTTCCAGATCCTaGAAAGCTTTGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRKVWQALNVGLEFLADLAFSRS*KALINS Trigger: GGAGTTAATCAAAGCTTTGCAGGATCTGGAAAATGC...CAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCTTTCGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGTCTCTTCTGCTGCTTTaGGGGGAGGGCTCTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSKSSFTILQIKQFPQGLSLLLL*GEGSWS Trigger: ACTCCAAGAGCCCTCCCCCCAAAGCAGCAGAAGAGA...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | CCTGTCTCCAGAGTACTCAGTCATCAGGGTCTTCCATaGGATGTCAACCTCAGCAGAAGAGAAGTCCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSRVLSHQGLP*DVNLSRREVHE Trigger: TTCATGGACTTCTCTTCTGCTGAGGTTGACATCCAATGGAAGACCCTGATGACTGAGTACTCTGGAGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | TGGCTGTACCCCCAGTTATCCCTGACATTCCATCTGTaGCACTACAACACGCTGTGTCTACAATCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WLYPQLSLTFHL*HYNTLCLQSFI Trigger: GATGAAGGATTGTAGACACAGCGTGTTGTAGTGCAACAGATGGAATGTCAGGGATAACTGGGGGTACAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCTCCTCTTGTATCTGCTaGAAAGTTCGTTTTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WVTRASFCLYSCPSLPASSSCIC*KVRFRD Trigger: GTCTCTAAAACGAACTTTTCAGCAGATACAAGAGGA...GCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR TCA 90 bp | GTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCTCCTCCTCTTGTATCTGCTaGAAAGTTCGTTTTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTRASFCLYSCPSLPASSSSCIC*KVRFRD Trigger: GTCTCTAAAACGAACTTTTCAGCAGATACAAGAGGA...GGAGCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGGATCCTGCAAAGCTTTaGTTAACTCCTCAGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKDPAKL*LTPQSR Trigger: TCTTGACTGAGGAGTTAATCAAAGCTTTGCAGGATC...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCGACAGTAGCATCCCCTaGCGCAGCATTTTCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VFPRAASPYCKSNNSHKADSSIP*RSIFQI Trigger: GATCTGGAAAATGCTGCGTCAGGGGATGCTACTGTC...GGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGTTCATCTACTGTTTTTaGAAGACGTTCAGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKFIYCF*KTFSCL Trigger: GAGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAA...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGTCTGAATGTGGGACTTaGGTTCCTTGCGGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDQEMSAIWQTLCGKAMLSECGT*VPCGPG Trigger: CCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGA...CAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGAGGTCTGGCAAGCTCTaGATGTGGGACTTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSKSSFTILQIKQFPQGLRSGKL*MWDLSS Trigger: GGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCT...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGGCTTATGGGTGTAAGAGAGCGAAAGATGGAAAAGCAGCAGTGGCAACGCTCTGCTGAGAGTTaGTCAGCTCTGAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSWLMGVRERKMEKQQWQRSAES*SALRAS Trigger: AGAAGCTCTCAGAGCTGAGCAACTCTCAGCAGAGCG...TTGCCACTGCTGCTTTTCCATCTTTCGCTCTCTTACACCCATAAGCCATGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCTACACACTTCGTTCTTaGCAGATGTTCAGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWVTRASFCLYSCPSLPAYTLRS*QMFSNL Trigger: AAGATTGCTGAACATCTGGCAAGAACGAAGTGTGTA...GGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATATAGACAGCTTCAGCTaGTGTATGAACTCGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHIDSFS*CMNSPP Trigger: CGGCGGCGAGTTCATACAGCAGCTGAAGCTGTCTAT...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTACTAGACGTAAAAATCGCAACTACATCATTCAGTCATAATGTCAGCTGGGCCACACGGAGACGATaGGTCCTGCGTGCTTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLDVKIATTSFSHNVSWATRRR*VLRACG Trigger: ACCGCAAGCACGCAGGACCCATCGTCTCCGTGTGGC...CCAGCTGACATTATGACTGAATGATGTAGTTGCGATTTTTACGTCTAGTAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCTGCAGAAGGATACATTCTaGGGATCAGAGCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSKSSFTILQIKQFPQGLQKDTF*GSEQGW Trigger: CCAGCCCTGCTCTGATCCCCAGAATGTATCCTTCTG...CAGGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCCAAGAGCAGCTTCACCATACTGCAAATCAAACAATTCCCACAAGGCCGCCTCTCTGGCAACATaGGAAAAAGCATCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPRAASPYCKSNNSHKAASLAT*EKASTS Trigger: GCTTGTGGATGCTTTTTCTCATGTTGCCAGAGAGGC...GGCCTTGTGGGAATTGTTTGATTTGCAGTATGGTGAAGCTGCTCTTGGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | GATTCTGTGCAGACAGAGCGCCCTCCATTGATGATCACTAATCACTGCACGAGGTCCTCTTGTATCTGCTaGAAAGTTCGTTTTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSVQTERPPLMITNHCTRSSCIC*KVRFRD Trigger: GTCTCTAAAACGAACTTTTCAGCAGATACAAGAGGA...CCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTGCACAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | ATAACAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTGAGTCCCATCTCATCCTCTTGTATCTGCTaGAAAGTTCGTTTTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITASTKTRLDRVELSPISSSCIC*KVRFRD Trigger: GTCTCTAAAACGAACTTTTCAGCAGATACAAGAGGA...TGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTCCAGAAGTACACATGATTTTCATGGCTTATGGGTGTAAGAGAGCGAAATCTGAATGTGGGACTTaGGTTCCTTGCGGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPEVHMIFMAYGCKRAKSECGT*VPCGPG Trigger: CCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGA...TTTCGCTCTCTTACACCCATAAGCCATGAAAATCATGTGTACTTCTGGAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTAGACGTAAAAATCGCAACTACATCATTCAGTCATAATGTCAGCTGGGGAGACGATGGGTCCTaGGTGCTTGCGGTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLDVKIATTSFSHNVSWGDDGS*VLAVVD Trigger: ATCCACCACCGCAAGCACGCAGGACCCATCGTCTCC...CCAGCTGACATTATGACTGAATGATGTAGTTGCGATTTTTACGTCTAGTAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGGCTTATGGGTGTAAGAGAGCGAAAGATGGAAAAGCAGCAGTGGCAATATTTGATTTGGCTTTaGGGAGCTCGCGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FSWLMGVRERKMEKQQWQYLIWL*GARGAT Trigger: TGTGGCACCGCGAGCTCCGCAAAGCCAAATCAAATA...TTGCCACTGCTGCTTTTCCATCTTTCGCTCTCTTACACCCATAAGCCATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | CATGATAATGGAATTCAACCCCAAATTAGTCTCCCTCCACTCCCTTCCTCTGCTGCTTTCTATTTGATTTaGCTTTGCGGAGCTCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HDNGIQPQISLPPLPSSAAFYLI*LCGARG Trigger: ACCGCGAGCTCCGCAAAGCCAAATCAAATAGAAAGC...AGCAGAGGAAGGGAGTGGAGGGAGACTAATTTGGGGTTGAATTCCATTATCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | TTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGAGTTCCTTGCGGACCTaGGTTACTCGAGCAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDQEMSAIWQTLCGKAMLSSLRT*VTRASF Trigger: GAAGCTTGCTCGAGTAACCCAGGTCCGCAAGGAACT...CAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| 3UTR CAA 72 bp | TCTCAGGCCCCTTCACTGAATTCCTTTTTATGGCTTTaGGACTTCAGCTCTGGGCGACAATTCCTATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SQAPSLNSFLWL*DFSSGRQFLSH Trigger: GTGTGATAGGAATTGTCGCCCAGAGCTGAAGTCCAAAAGCCATAAAAAGGAATTCAGTGAAGGGGCCTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | ACTAAGTTGTCATCAGAGCAGAGCTGCTACAGTCTTTaGGTCTGTTTTGTGGGAAAGCAGTGTCTGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKLSSEQSCYSL*VCFVGKQCLEG Trigger: ACCCTCCAGACACTGCTTTCCCACAAAACAGACCAAAAGACTGTAGCAGCTCTGCTCTGATGACAACTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | CTACATCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAAACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHHSVIMSAGMIMEFNPKTSCTS*GREAIF Trigger: GAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGT...TTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | AATCAAACTCCAAGAGAGACTTGGAGAGTAAGTTCAACCAGTTGTCTTGCGTATTCTTCTCTTCTGCTTTaGGGGGAGGGCTCTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQTPRETWRVSSTSCLAYSSLLL*GEGSWS Trigger: ACTCCAAGAGCCCTCCCCCCAAAGCAGAAGAGAAGA...ATACGCAAGACAACTGGTTGAACTTACTCTCCAAGTCTCTCTTGGAGTTTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103123.10 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGGGAGAAGAAACATCACAGAATGTTGTTCAACAACACCATCTTTATTCGCCTCTCTGGCAACATaGGAAAAAGCATCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAGRRNITECCSTTPSLFASLAT*EKASTS Trigger: GCTTGTGGATGCTTTTTCTCATGTTGCCAGAGAGGC...GAATAAAGATGGTGTTGTTGAACAACATTCTGTGATGTTTCTTCTCCCTGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGGCTTATGGGTGTAAGAGAGCGAAAGATGGAAAAGCAGCAGTGGCAATTTACAGCCTTCATCTaGCTCTCTGGCAACATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSWLMGVRERKMEKQQWQFTAFI*LSGNMR Trigger: TCTCATGTTGCCAGAGAGGCAGATGAAGGCTGTAAA...TTGCCACTGCTGCTTTTCCATCTTTCGCTCTCTTACACCCATAAGCCATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGAAGACCCAGGTTTGATCCCCAGCACACAACCATTTGTAATTCCAGTTCCTACACACTTCGTTCTTaGCAGATGTTCAGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRRPRFDPQHTTICNSSSYTLRS*QMFSNL Trigger: AAGATTGCTGAACATCTGGCAAGAACGAAGTGTGTA...GGAACTGGAATTACAAATGGTTGTGTGCTGGGGATCAAACCTGGGTCTTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | TTTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTaGTGGCAAAGCTATGCTGCCGACCTTGTGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRSGNVGNLANS*WQSYAADLVSN Trigger: ATTGCTCACAAGGTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | CTAACAGAAGTGTTTAGATCAGGAAATGTCGGCAATTaGGCAAACTCTTTGTGGCAAAGCTATGCTGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTEVFRSGNVGN*ANSLWQSYAAD Trigger: GTCGGCAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAAACACTTCTGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGGCTTATGGGTGTAAGAGAGCGAAAGATGGAAAAGCAGCAGTGGCAAGATCCTGCAAAGCTTTaGTTAACTCCTCAGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSWLMGVRERKMEKQQWQDPAKL*LTPQSR Trigger: TCTTGACTGAGGAGTTAATCAAAGCTTTGCAGGATC...TTGCCACTGCTGCTTTTCCATCTTTCGCTCTCTTACACCCATAAGCCATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATGATCCTGCAAAGCTTTaGTTAACTCCTCAGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHDPAKL*LTPQSR Trigger: TCTTGACTGAGGAGTTAATCAAAGCTTTGCAGGATC...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAATTAGTAGGTCTGGCAAGCTCTaGATGTGGGACTTGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSHNVSWHDNGIQPQISRSGKL*MWDLSS Trigger: GGAACTCAAGTCCCACATTCAGAGCTTGCCAGACCT...ACTAATTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTAGACGTAAAAATCGCAACTACATCATTCAGTCATAATGTCAGCTGGCGCTCTGCTGAGAGTTaGTCAGCTCTGAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLDVKIATTSFSHNVSWRSAES*SALRAS Trigger: AGAAGCTCTCAGAGCTGAGCAACTCTCAGCAGAGCG...CCAGCTGACATTATGACTGAATGATGTAGTTGCGATTTTTACGTCTAGTAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | ATATCGTGTGTCCTGGAGACTAGAAAGCAATGTTCAGTCCATTTCCAGTCTCTGCTTCATCTGCCTCTCTaGCAACATGAGAAAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISCVLETRKQCSVHFQSLLHLPL*QHEKKH Trigger: ATGCTTTTTCTCATGTTGCCAGAGAGGCAGATGAAG...CAGAGACTGGAAATGGACTGAACATTGCTTTCTAGTCTCCAGGACACACGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCATTTCATGCATTTTCCAGATCCTaGAAAGCTTTGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGHGGGTQQGRLKTEAFHAFSRS*KALINS Trigger: GGAGTTAATCAAAGCTTTGCAGGATCTGGAAAATGC...ATGAAATGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | TTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGCTTCATCTGCCTCTCTaGCAACATGAGAAAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDQEMSAIWQTLCGKAMLLHLPL*QHEKKH Trigger: ATGCTTTTTCTCATGTTGCCAGAGAGGCAGATGAAG...CAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTTCCAGAAGTACACATGATTTTCATGGCTTATGGGTGTAAGAGAGCGAAAAGTAAGCTTTCTATTTaGTTTGGCTTTGCGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLPEVHMIFMAYGCKRAKSKLSI*FGFAEL Trigger: GAGCTCCGCAAAGCCAAATCAAATAGAAAGCTTACT...TTTCGCTCTCTTACACCCATAAGCCATGAAAATCATGTGTACTTCTGGAAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGGCATTTTCCAGATCCTaGAAAGCTTTGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDQEMSAIWQTLCGKAMLAFSRS*KALINS Trigger: GGAGTTAATCAAAGCTTTGCAGGATCTGGAAAATGC...CAGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGGGAGAAGAAACATCACAGAATGTTGTTCAACAACACCATCTTTATTCCTTCATCTGCCTCTCTaGCAACATGAGAAAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EAGRRNITECCSTTPSLFLHLPL*QHEKKH Trigger: ATGCTTTTTCTCATGTTGCCAGAGAGGCAGATGAAG...GAATAAAGATGGTGTTGTTGAACAACATTCTGTGATGTTTCTTCTCCCTGCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTAGACGTAAAAATCGCAACTACATCATTCAGTCATAATGTCAGCTGGGCATTTTCCAGATCCTaGAAAGCTTTGATTAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLDVKIATTSFSHNVSWAFSRS*KALINS Trigger: GGAGTTAATCAAAGCTTTGCAGGATCTGGAAAATGC...CCAGCTGACATTATGACTGAATGATGTAGTTGCGATTTTTACGTCTAGTAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| 3UTR CAA 72 bp | AACTTTTATGTCTCAGATCAGCTTCGAATCTTACTGTaGGATTCTCTAGAATGCTCGAAAAATAAACACACC | + |
|
Preference number: 4 (lower is better) Translates to: NFYVSDQLRILL*DSLECSKNKHT Trigger: GGTGTGTTTATTTTTCGAGCATTCTAGAGAATCCAACAGTAAGATTCGAAGCTGATCTGAGACATAAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGGCCGCTGGGACAACAACTATGGGGATGGTATCAGTCCCATGGCCTGGATGGGTCCTGCGTGCTaGCGGTGGTGGATGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLGRWDNNYGDGISPMAWMGPAC*RWWMSH Trigger: GTGGCTCATCCACCACCGCAAGCACGCAGGACCCAT...CCAGGCCATGGGACTGATACCATCCCCATAGTTGTTGTCCCAGCGGCCCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
||
| CDS CCA 90 bp | ACCTCTTTCTGGTTCTGGGTGTATTCCACCAGCATCCGAGCCAGCTaGCGCCGGTCTTCCAGTTCCGCTGCCAGGCGCCCGTTATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSFWFWVYSTSIRAS*RRSSSSAARRPLYS Trigger: GGAATATAACGGGCGCCTGGCAGCGGAACTGGAAGACCGGCGCCAGCTGGCTCGGATGCTGGTGGAATACACCCAGAACCAGAAAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 ENSMUST00000128206.8 ENSMUST00000135603.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAGATCTCAACCATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCATGGGTCCTGCGTGCTaGCGGTGGTGGATGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGRSQPFRTTAAASEHPVMGPAC*RWWMSH Trigger: GTGGCTCATCCACCACCGCAAGCACGCAGGACCCAT...GACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATGGTTGAGATCTCCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGGAGATCTCAACCATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCGCCTGCAGAAGGGTCTaGGGGAGAGTAGCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRSQPFRTTAAASEHPVACRRV*GRVASR Trigger: CCTGGAAGCTACTCTCCCCAAGACCCTTCTGCAGGC...GACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATGGTTGAGATCTCCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | CTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGGCCTGCAGAAGGGTCTaGGGGAGAGTAGCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LGYSSKLLFILLSLSPCQACRRV*GRVASR Trigger: CCTGGAAGCTACTCTCCCCAAGACCCTTCTGCAGGC...CTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| CDS-3UTR CAA 90 bp | GGAGACTGGGGGCATGGTGGAGGCACACAACAAGGAAGATTAAAAACTGAAGCAATGGGTCCTGCGTGCTaGCGGTGGTGGATGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GDWGHGGGTQQGRLKTEAMGPAC*RWWMSH Trigger: GTGGCTCATCCACCACCGCAAGCACGCAGGACCCAT...TGCTTCAGTTTTTAATCTTCCTTGTTGTGTGCCTCCACCATGCCCCCAGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | ATAACAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTGAGTCCCATCTCAGCCTGCAGAAGGGTCTaGGGGAGAGTAGCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: ITASTKTRLDRVELSPISACRRV*GRVASR Trigger: CCTGGAAGCTACTCTCCCCAAGACCCTTCTGCAGGC...TGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | ACCAGAAGTCACCCACCCCACCCGCCAGATCAACTCTCAGGGACAAAAGTTTCATGGGACTTGAGTTCCTaGCGGACCTGGGTTACTCGA | + |
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Preference number: 5 (lower is better) Translates to: TRSHPPHPPDQLSGTKVSWDLSS*RTWVTR Trigger: TCGAGTAACCCAGGTCCGCAAGGAACTCAAGTCCCA...TGAAACTTTTGTCCCTGAGAGTTGATCTGGCGGGTGGGGTGGGTGACTTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
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| CDS-3UTR CAA 90 bp | ATAACAGCTTCCACGAAGACCAGGCTGGACAGAGTGGAACTGAGTCCCATCTCACTATTTGATTTGGCTTaGCGGAGCTCGCGGTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: ITASTKTRLDRVELSPISLFDLA*RSSRCH Trigger: GTGGCACCGCGAGCTCCGCAAAGCCAAATCAAATAG...TGAGATGGGACTCAGTTCCACTCTGTCCAGCCTGGTCTTCGTGGAAGCTGTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | GTCTTGCGTATGTACCACTACCAGCCCCCAGGGGAAGATTCTGTGCAGACAGAGAGCTTTCTATTTGATTaGGCTTTGCGGAGCTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: VLRMYHYQPPGEDSVQTESFLFD*ALRSSR Trigger: CCGCGAGCTCCGCAAAGCCAAATCAAATAGAAAGCT...CTCTGTCTGCACAGAATCTTCCCCTGGGGGCTGGTAGTGGTACATACGCAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | GATTCTGTGCAGACAGAGCGCCCTCCATTGATGATCACTAATCACTGCACGAGGTGGGACTTGAGTTCCTaGCGGACCTGGGTTACTCGA | + |
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Preference number: 5 (lower is better) Translates to: DSVQTERPPLMITNHCTRWDLSS*RTWVTR Trigger: TCGAGTAACCCAGGTCCGCAAGGAACTCAAGTCCCA...CCTCGTGCAGTGATTAGTGATCATCAATGGAGGGCGCTCTGTCTGCACAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 |
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| CDS TCA 90 bp | TCTGCATCTGTAATTTTCTCTAGCAGCGACACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTCTGTCGGACAGTAGCATCCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: SASVIFSSSDTSCTS*GREAIFCRTVASPD Trigger: GTCAGGGGATGCTACTGTCCGACAGAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGTGTCGCTGCTAGAGAAAATTACAGATGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| CDS-3UTR CAA 90 bp | ACCAGAAGTCACCCACCCCACCCGCCAGATCAACTCTCAGGGACAAAAGTTTCAAGCTTTCTATTTGATTaGGCTTTGCGGAGCTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: TRSHPPHPPDQLSGTKVSSFLFD*ALRSSR Trigger: CCGCGAGCTCCGCAAAGCCAAATCAAATAGAAAGCT...TGAAACTTTTGTCCCTGAGAGTTGATCTGGCGGGTGGGGTGGGTGACTTCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCAGCTTTCTATTTGATTaGGCTTTGCGGAGCTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: WVTRASFCLYSCPSLPASSFLFD*ALRSSR Trigger: CCGCGAGCTCCGCAAAGCCAAATCAAATAGAAAGCT...GCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | TATCGTGTGTCCTGGAGACTAGAAAGCAATGTTCAGTCCATTTCCAGTCTCTGGGCCTGCAGAAGGGTCTaGGGGAGAGTAGCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: YRVSWRLESNVQSISSLWACRRV*GRVASR Trigger: CCTGGAAGCTACTCTCCCCAAGACCCTTCTGCAGGC...CCAGAGACTGGAAATGGACTGAACATTGCTTTCTAGTCTCCAGGACACACGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| CDS TCA 90 bp | TCTTTGTCTGTAATTTTCTCTAGCAGCGACACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTCTGTCGGACAGTAGCATCCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: SLSVIFSSSDTSCTS*GREAIFCRTVASPD Trigger: GTCAGGGGATGCTACTGTCCGACAGAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGTGTCGCTGCTAGAGAAAATTACAGACAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 ENSMUST00000128206.8 ENSMUST00000135603.2 |
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| CDS-3UTR CAA 90 bp | CAGCAATTGGCTCTGCTAGGAGACTGTCTTCCTCTGTCTCCTGAGCCCTTGGCTGTACACACTTCGTTCTaGCCAGATGTTCAGCAATCT | + |
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Preference number: 5 (lower is better) Translates to: QQLALLGDCLPLSPEPLAVHTSF*PDVQQS Trigger: AGATTGCTGAACATCTGGCAAGAACGAAGTGTGTAC...AGCCAAGGGCTCAGGAGACAGAGGAAGACAGTCTCCTAGCAGAGCCAATTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| CDS-3UTR CAA 90 bp | ACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGCTCCAGGCGTTCAGCTGCCTCTTaGTCTGTAATTTTCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: TRASFCLYSCPSLPASSRRSAAS*SVIFSS Trigger: GCTAGAGAAAATTACAGACAAAGAGGCAGCTGAACG...CCTGGAGCTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| CDS-3UTR CAA 90 bp | CATTCCGGACCACAGCAGCTGCTTCAGAGCACCCTGTCTCCAGAGTACTCAGTCCTTCATCTACTGTTTTaGAAAGACGTTCAGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: HSGPQQLLQSTLSPEYSVLHLLF*KDVQLP Trigger: AGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAAG...GACTGAGTACTCTGGAGACAGGGTGCTCTGAAGCAGCTGCTGTGGTCCGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | GTGTCCTGGAGACTAGAAAGCAATGTTCAGTCCATTTCCAGTCTCTGGGTGGACAGCTTTCTATTTGATTaGGCTTTGCGGAGCTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: VSWRLESNVQSISSLWVDSFLFD*ALRSSR Trigger: CCGCGAGCTCCGCAAAGCCAAATCAAATAGAAAGCT...GTCCACCCAGAGACTGGAAATGGACTGAACATTGCTTTCTAGTCTCCAGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152452.8 |
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| CDS-3UTR CAA 90 bp | CAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGGGTTACTCGAGCAAGGTACACACTTCGTTCTaGCCAGATGTTCAGCAATCT | + |
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Preference number: 5 (lower is better) Translates to: QALNVGLEFLADLGYSSKVHTSF*PDVQQS Trigger: AGATTGCTGAACATCTGGCAAGAACGAAGTGTGTAC...CTTGCTCGAGTAACCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| CDS-3UTR CAA 90 bp | CTGGGTTACTCGAGCAAGCTTCTGTTTATACTCCTGTCCCTCTCTCCCTGCCAGGTACACACTTCGTTCTaGCCAGATGTTCAGCAATCT | + |
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Preference number: 5 (lower is better) Translates to: LGYSSKLLFILLSLSPCQVHTSF*PDVQQS Trigger: AGATTGCTGAACATCTGGCAAGAACGAAGTGTGTAC...CTGGCAGGGAGAGAGGGACAGGAGTATAAACAGAAGCTTGCTCGAGTAACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| CDS-3UTR CAA 90 bp | TCCAATGCCACCTTCTGGCCTCTACAGGCACCTGGCATGTACATGGTGCACATACGTTCAGCTGCCTCTTaGTCTGTAATTTTCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: SNATFWPLQAPGMYMVHIRSAAS*SVIFSS Trigger: GCTAGAGAAAATTACAGACAAAGAGGCAGCTGAACG...TATGTGCACCATGTACATGCCAGGTGCCTGTAGAGGCCAGAAGGTGGCATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | GTCTGGCAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGGGTTACTCGCTTCATCTACTGTTTTaGAAAGACGTTCAGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: VWQALNVGLEFLADLGYSLHLLF*KDVQLP Trigger: AGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAAG...CGAGTAACCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTGCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACAGTAAAGGTACACACTTCGTTCTaGCCAGATGTTCAGCAATCT | + |
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Preference number: 5 (lower is better) Translates to: GKAVSGGCSEWCVHVTVKVHTSF*PDVQQS Trigger: AGATTGCTGAACATCTGGCAAGAACGAAGTGTGTAC...CTTTACTGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | TTTAGATCAGGAAATGTCGGCAATTTGGCAAACTCTTTGTGGCAAAGCTATGCTGCCTGCAGAAGGGTCTaGGGGAGAGTAGCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: FRSGNVGNLANSLWQSYAACRRV*GRVASR Trigger: CCTGGAAGCTACTCTCCCCAAGACCCTTCTGCAGGC...AGCATAGCTTTGCCACAAAGAGTTTGCCAAATTGCCGACATTTCCTGATCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | ACCAGAAGTCACCCACCCCACCCGCCAGATCAACTCTCAGGGACAAAAGTTTCACTTCATCTACTGTTTTaGAAAGACGTTCAGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: TRSHPPHPPDQLSGTKVSLHLLF*KDVQLP Trigger: AGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAAG...TGAAACTTTTGTCCCTGAGAGTTGATCTGGCGGGTGGGGTGGGTGACTTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | CAAGCTCTGAATGTGGGACTTGAGTTCCTTGCGGACCTGGGTTACTCGAGCAAGCTTCATCTACTGTTTTaGAAAGACGTTCAGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: QALNVGLEFLADLGYSSKLHLLF*KDVQLP Trigger: AGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAAG...CTTGCTCGAGTAACCCAGGTCCGCAAGGAACTCAAGTCCCACATTCAGAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109518.8 ENSMUST00000128206.8 |
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| CDS-3UTR CAA 90 bp | TTTTGTGGGAAAGCAGTGTCTGGAGGGTGTTCAGAGTGGTGTGTGCATGTGACACGTTCAGCTGCCTCTTaGTCTGTAATTTTCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: FCGKAVSGGCSEWCVHVTRSAAS*SVIFSS Trigger: GCTAGAGAAAATTACAGACAAAGAGGCAGCTGAACG...TGTCACATGCACACACCACTCTGAACACCCTCCAGACACTGCTTTCCCACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | CTACATCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAACTATTTGATTTGGCTTaGCGGAGCTCGCGGTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LHHSVIMSAGMIMEFNPKLFDLA*RSSRCH Trigger: GTGGCACCGCGAGCTCCGCAAAGCCAAATCAAATAG...TTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | AAGCTTCCAGAAGTACACATGATTTTCATGGCTTATGGGTGTAAGAGAGCGAAACGTTCAGCTGCCTCTTaGTCTGTAATTTTCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: KLPEVHMIFMAYGCKRAKRSAAS*SVIFSS Trigger: GCTAGAGAAAATTACAGACAAAGAGGCAGCTGAACG...TTTCGCTCTCTTACACCCATAAGCCATGAAAATCATGTGTACTTCTGGAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS-3UTR CAA 90 bp | CTACATCATTCAGTCATAATGTCAGCTGGCATGATAATGGAATTCAACCCCAAAGTACACACTTCGTTCTaGCCAGATGTTCAGCAATCT | + |
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Preference number: 5 (lower is better) Translates to: LHHSVIMSAGMIMEFNPKVHTSF*PDVQQS Trigger: AGATTGCTGAACATCTGGCAAGAACGAAGTGTGTAC...TTTGGGGTTGAATTCCATTATCATGCCAGCTGACATTATGACTGAATGATGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 |
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| CDS CCA 72 bp | TGGTTCTGGGTGTATTCCACCAGCATCCGAGCCAGCTaGCGCCGGTCTTCCAGTTCCGCTGCCAGGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: WFWVYSTSIRAS*RRSSSSAARRP Trigger: CGGGCGCCTGGCAGCGGAACTGGAAGACCGGCGCCAGCTGGCTCGGATGCTGGTGGAATACACCCAGAACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 ENSMUST00000128206.8 ENSMUST00000135603.2 |
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| CDS GCA 72 bp | GGAGGGCTCTTGGAGTCCTCCATAGACAGCTTCAGCTaGTGTATGAACTCGCCGCCGTACACACTTCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGLLESSIDSFS*CMNSPPYTLRS Trigger: AGAACGAAGTGTGTACGGCGGCGAGTTCATACAGCAGCTGAAGCTGTCTATGGAGGACTCCAAGAGCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 ENSMUST00000128206.8 ENSMUST00000152452.8 |
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| CDS TCA 72 bp | GTAATTTTCTCTAGCAGCGACACGTCTTGCACTTCCTaGGGCAGGGAAGCGATCTTCTGTCGGACAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: VIFSSSDTSCTS*GREAIFCRTVA Trigger: TGCTACTGTCCGACAGAAGATCGCTTCCCTGCCTCAGGAAGTGCAAGACGTGTCGCTGCTAGAGAAAATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 ENSMUST00000128206.8 ENSMUST00000135603.2 ENSMUST00000152452.8 |
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| CDS CAA 72 bp | TCATCTACTGTTTTTGAAAGACGTTCAGCTGCCTCTTaGTCTGTAATTTTCTCTAGCAGCGACACGTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSTVFERRSAAS*SVIFSSSDTSC Trigger: GCAAGACGTGTCGCTGCTAGAGAAAATTACAGACAAAGAGGCAGCTGAACGTCTTTCAAAAACAGTAGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000029180.14 ENSMUST00000103123.10 ENSMUST00000109518.8 ENSMUST00000128206.8 ENSMUST00000135603.2 |
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