Pregenerated sensors for RPP30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024800Ensembl transcript IDs: ENSMUST00000025714.9
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAACTGAGTATCCCAGGTaGGCAGCAGTCTCCACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRTEYPR*AAVSTS Trigger: ACTCGTGGAGACTGCTGCTCACCTGGGATACTCAGT...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATGGACACGGCAGCCTTaGCATCATTTTCAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRWTRQP*HHFQKA Trigger: GGCTTTCTGAAAATGATGGCAAGGCTGCCGTGTCCA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATTCATCATCTGCTTCTaGTGGCCGTGGTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRFIICF*WPWFLH Trigger: GTGAAGAAACCACGGCCATCAGAAGCAGATGATGAA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAGGAGAAATACAGCTCTaGAATTTGTGGACACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRGEIQL*NLWTRQ Trigger: CTGCCGTGTCCACAAATTGCAGAGCTGTATTTCTCC...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATTCCAAAGGCCTTTCTaGAGCACTGGACAGAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRFQRPF*STGQNY Trigger: GTAATTCTGTCCAGTGCTGCAGAAAGGCCTTTGGAA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGACGATGGGTAAAGTTGTaGAGAGTTCAGAAACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRRWVKL*RVQKLL Trigger: TAGCAGTTTCTGAACTCTTCACAACTTTACCCATCG...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAAGATCTGCATCAAATTaGGGGCATTGGAGATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRRSASN*GHWRLC Trigger: ACACAATCTCCAATGCCCTCAATTTGATGCAGATCT...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAGTTTGCCACGTCATATaGTCCTCTTATTTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRVCHVI*SSYFQR Trigger: CCTTTGGAAATAAGAGGACCATATGACGTGGCAAAC...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAAGCTTTCTTGCACACTaGAAGAGATTCATCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRSFLAH*KRFIIC Trigger: GCAGATGATGAATCTCTTCCAGTGTGCAAGAAAGCT...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAAGTCAACAATGTGATTaGTGGCAACAACTGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRSQQCD*WQQLSI Trigger: GATACTCAGTTGTTGCCATCAATCACATTGTTGACT...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATGTCTTTGGAAAGACTaGAACAATATCATACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRCLWKD*NNIIQP Trigger: CGGCTGTATGATATTGTTGCAGTCTTTCCAAAGACA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATTTCCTTTGCAGATCTaGATCAAATTGAGGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRFPLQI*IKLRAL Trigger: CAATGCCCTCAATTTGATGCAGATCTGCAAAGGAAA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATTAAAGTCAACAATGTaGTTGATGGCAACAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRLKSTM*LMATTE Trigger: CTCAGTTGTTGCCATCAATCACATTGTTGACTTTAA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAAATTTTAATTGGTCTTaGTTTTCCCTGTACGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRNFNWS*FSLYDG Trigger: CCCATCGTACAGGGAAAATCAAGACCAATTAAAATT...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATTTCTAGTTTCTCCATaGAGAAATACAGCTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRFLVSP*RNTALQ Trigger: TTGCAGAGCTGTATTTCTCCATGGAGAAACTAGAAA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAGAAGAGTTCAGAAACTaGTATTGGCTTTTCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWREEFRN*YWLFNF Trigger: GAAATTGAAAAGCCAATAGCAGTTTCTGAACTCTTC...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATTCAGAAACTGCTATTaGCTTTTCAATTTCCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRFRNCY*LFNFPF Trigger: AAACGGGAAATTGAAAAGCCAATAGCAGTTTCTGAA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGATGTGTACAAGCAACATaGAAAAGCTTTTCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FIFTVTDELRRGGGSAWRCVQAT*KSFSVF Trigger: AAAGACAGAAAAGCTTTTCCATGTTGCTTGTACACA...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAGTGGACACGGCAGCCTaGCCATCATTTTCAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FIFTVTDELRRGGGSAWRVDTAA*PSFSES Trigger: GCTTTCTGAAAATGATGGCAAGGCTGCCGTGTCCAC...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGACATACAGCCGGACCCTaGACGAAGTTGCTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FIFTVTDELRRGGGSAWRHTAGP*TKLLSK Trigger: TTTTGAGAGCAACTTCGTCAAGGGTCCGGCTGTATG...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS GCA 90 bp | CTGCATCAAATTGAGGGCATTGGAGATTGTGTACCTTCTCATCGTTaGATCTCTGATAGCAGGACCATAGACAAGTTCAAAGCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHQIEGIGDCVPSHR*ISDSRTIDKFKAQA Trigger: GGCCTGGGCTTTGAACTTGTCTATGGTCCTGCTATCAGAGATGCAACGATGAGAAGGTACACAATCTCCAATGCCCTCAATTTGATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS GCA 90 bp | CTCCATGGAGAAATACAGCTCTGCAATTTGTGGACACGGCAGCCTTaGCATCATTTTCAGAAAGCCCAAACAGCAGTCCTAAGTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHGEIQLCNLWTRQP*HHFQKAQTAVLSLP Trigger: TGGCAAACTTAGGACTGCTGTTTGGGCTTTCTGAAAATGATGGCAAGGCTGCCGTGTCCACAAATTGCAGAGCTGTATTTCTCCATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTTACAGTGACTGATGAGCTACGAAGGGGAGGAGGCAGTGCGTGGAGAATCAAATTGAGGGCATaGGAGATTGTGTACCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FIFTVTDELRRGGGSAWRIKLRA*EIVYLL Trigger: GAGAAGGTACACAATCTCCAATGCCCTCAATTTGAT...TCTCCACGCACTGCCTCCTCCCCTTCGTAGCTCATCAGTCACTGTAAAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS TCA 90 bp | TTCTGTCTTTGGAAAGACTGCAACAATATCATACAGCCGGACCCTTaGCGAAGTTGCTCTCAAAACATTACAGTGAGCTGGATCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FCLWKDCNNIIQPDP*RSCSQNITVSWICN Trigger: GTTACAGATCCAGCTCACTGTAATGTTTTGAGAGCAACTTCGTCAAGGGTCCGGCTGTATGATATTGTTGCAGTCTTTCCAAAGACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS TCA 90 bp | ACATTTAGCTTTCTTGCACACTGGAAGAGATTCATCATCTGCTTCTaGTGGCCGTGGTTTCTTCACTGTAGAAATAATTCCAAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFSFLAHWKRFIICF*WPWFLHCRNNSKSS Trigger: ACTGCTTTTGGAATTATTTCTACAGTGAAGAAACCACGGCCATCAGAAGCAGATGATGAATCTCTTCCAGTGTGCAAGAAAGCTAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS CAA 90 bp | TCTCCATGGAGAAATACAGCTCTGCAATTTGTGGACACGGCAGCCTaGCCATCATTTTCAGAAAGCCCAAACAGCAGTCCTAAGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPWRNTALQFVDTAA*PSFSESPNSSPKFA Trigger: GGCAAACTTAGGACTGCTGTTTGGGCTTTCTGAAAATGATGGCAAGGCTGCCGTGTCCACAAATTGCAGAGCTGTATTTCTCCATGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS TCA 72 bp | TTCCTTAAAGTCAACAATGTGATTGATGGCAACAACTaGGTATCCCAGGTGAGCAGCAGTCTCCACGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLKVNNVIDGNN*VSQVSSSLHES Trigger: GGACTCGTGGAGACTGCTGCTCACCTGGGATACTCAGTTGTTGCCATCAATCACATTGTTGACTTTAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS GCA 72 bp | GAAATACAGCTCTGCAATTTGTGGACACGGCAGCCTTaGCATCATTTTCAGAAAGCCCAAACAGCAGTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: EIQLCNLWTRQP*HHFQKAQTAVL Trigger: TAGGACTGCTGTTTGGGCTTTCTGAAAATGATGGCAAGGCTGCCGTGTCCACAAATTGCAGAGCTGTATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS CAA 72 bp | AGAAATACAGCTCTGCAATTTGTGGACACGGCAGCCTaGCCATCATTTTCAGAAAGCCCAAACAGCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RNTALQFVDTAA*PSFSESPNSSP Trigger: AGGACTGCTGTTTGGGCTTTCTGAAAATGATGGCAAGGCTGCCGTGTCCACAAATTGCAGAGCTGTATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS TCA 72 bp | TGGAAAGACTGCAACAATATCATACAGCCGGACCCTTaGCGAAGTTGCTCTCAAAACATTACAGTGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WKDCNNIIQPDP*RSCSQNITVSW Trigger: CCAGCTCACTGTAATGTTTTGAGAGCAACTTCGTCAAGGGTCCGGCTGTATGATATTGTTGCAGTCTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS CAA 72 bp | TTGGAAAGACTGCAACAATATCATACAGCCGGACCCTaGACGAAGTTGCTCTCAAAACATTACAGTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LERLQQYHTAGP*TKLLSKHYSEL Trigger: CAGCTCACTGTAATGTTTTGAGAGCAACTTCGTCAAGGGTCCGGCTGTATGATATTGTTGCAGTCTTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS CAA 72 bp | CATCATTTTCAGAAAGCCCAAACAGCAGTCCTAAGTTaGCCACGTCATATGGTCCTCTTATTTCCAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HHFQKAQTAVLS*PRHMVLLFPKA Trigger: GGCCTTTGGAAATAAGAGGACCATATGACGTGGCAAACTTAGGACTGCTGTTTGGGCTTTCTGAAAATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS GCA 72 bp | ATTGAGGGCATTGGAGATTGTGTACCTTCTCATCGTTaGATCTCTGATAGCAGGACCATAGACAAGTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IEGIGDCVPSHR*ISDSRTIDKFK Trigger: TTTGAACTTGTCTATGGTCCTGCTATCAGAGATGCAACGATGAGAAGGTACACAATCTCCAATGCCCTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS TCA 72 bp | TTTCTTGCACACTGGAAGAGATTCATCATCTGCTTCTaGTGGCCGTGGTTTCTTCACTGTAGAAATAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLAHWKRFIICF*WPWFLHCRNNS Trigger: GGAATTATTTCTACAGTGAAGAAACCACGGCCATCAGAAGCAGATGATGAATCTCTTCCAGTGTGCAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS TCA 72 bp | CGGACCCTTGACGAAGTTGCTCTCAAAACATTACAGTaGGCTGGATCTGTAACTATAATTGTCAATCTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RTLDEVALKTLQ*AGSVTIIVNLV Trigger: AACTAGATTGACAATTATAGTTACAGATCCAGCTCACTGTAATGTTTTGAGAGCAACTTCGTCAAGGGTCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||
| CDS TCA 72 bp | TTGGTCTTGATTTTCCCTGTACGATGGGTAAAGTTGTaGAGAGTTCAGAAACTGCTATTGGCTTTTCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LVLIFPVRWVKL*RVQKLLLAFQF Trigger: AAATTGAAAAGCCAATAGCAGTTTCTGAACTCTTCACAACTTTACCCATCGTACAGGGAAAATCAAGACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025714.9 |
||