Pregenerated sensors for RPN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030062Ensembl transcript IDs: ENSMUST00000032143.8, ENSMUST00000204838.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCCCTCTGTGGGTCCTCAAGCACCAGGGCCCTTCACACACACTaGCCACTGCCTGGAACACTGGCCTGCACGGTTCTTAAGGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QALCGSSSTRALHTH*PLPGTLACTVLKAQ Trigger: CTGAGCCTTAAGAACCGTGCAGGCCAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACCCACAGAGGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR GCA 90 bp | TCTGTGGGTCCTCAAGCACCAGGGCCCTTCACACACACTGCCCACTaGCTGGAACACTGGCCTGCACGGTTCTTAAGGCTCAGCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SVGPQAPGPFTHTAH*LEHWPARFLRLSSG Trigger: TCCAGAGCTGAGCCTTAAGAACCGTGCAGGCCAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACCCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR GCA 90 bp | TTGAGGCCTTGGGCTAACCACAACCTCCTCTTTCTACCTATCCAATaGCACTGGAAGTCTAGGCACCTGGGCCTGCTCTGGAGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LRPWANHNLLFLPIQ*HWKSRHLGLLWSQE Trigger: CTCCTGGCTCCAGAGCAGGCCCAGGTGCCTAGACTTCCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGTTAGCCCAAGGCCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | GATAGGCCACTGCCACGGACAGGCCTCAGTGGTGTCTTGAGGCCTTaGGCTAACCACAACCTCCTCTTTCTACCTATCCAATGCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: DRPLPRTGLSGVLRP*ANHNLLFLPIQCHW Trigger: CCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGTTAGCCCAAGGCCTCAAGACACCACTGAGGCCTGTCCGTGGCAGTGGCCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | AGCCCTGTCATAACCTGTAATATCCACTCTAGTACAGGCCCTCTGTaGGTCCTCAAGCACCAGGGCCCTTCACACACACTGCCCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: SPVITCNIHSSTGPL*VLKHQGPSHTLPTA Trigger: GGCAGTGGGCAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACCCACAGAGGGCCTGTACTAGAGTGGATATTACAGGTTATGACAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | TACAAAGGCTCACTCCACCCCTGTTGTGTGGCCTCCGGACCTTACTaGGCCTCTCGAGACTTGTATCAGTGTTCTGACACTTGCCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: YKGSLHPCCVASGPY*ASRDLYQCSDTCLA Trigger: TGCAAGGCAAGTGTCAGAACACTGATACAAGTCTCGAGAGGCCCAGTAAGGTCCGGAGGCCACACAACAGGGGTGGAGTGAGCCTTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | GCCCATAATCAAGGACGTCCTCAGATCTCGAGGGGTTCCCCAGCTTaGTATAGCTTTCCACATTTCGGGACGCCAGTTTCACTCGCATGG | + |
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Preference number: 1 (lower is better) Translates to: AHNQGRPQISRGSPA*YSFPHFGTPVSLAW Trigger: CCATGCGAGTGAAACTGGCGTCCCGAAATGTGGAAAGCTATACCAAGCTGGGGAACCCCTCGAGATCTGAGGACGTCCTTGATTATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR TCA 90 bp | CACCTAAGATGTGCAGGAGGTGCACGAGAGCCTGACTCAGTCAGGTaGCAGCTTCCTGACCTCTGTATGTTACTTGAAGGAGCAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: HLRCAGGAREPDSVR*QLPDLCMLLEGANR Trigger: CCTGTTTGCTCCTTCAAGTAACATACAGAGGTCAGGAAGCTGTCACCTGACTGAGTCAGGCTCTCGTGCACCTCCTGCACATCTTAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | GGCACAGATTTAAGGAATACAAAGGCTCACTCCACCCCTGTTGTGTaGCCTCCGGACCTTACTGGGCCTCTCGAGACTTGTATCAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: GTDLRNTKAHSTPVV*PPDLTGPLETCISV Trigger: AACACTGATACAAGTCTCGAGAGGCCCAGTAAGGTCCGGAGGCCACACAACAGGGGTGGAGTGAGCCTTTGTATTCCTTAAATCTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR TCA 90 bp | GTGTGCTTCAAGTCCACGTTCTCTTCCACAGCAATATTGCCCCAGTaGGATACCTCGATGACCCGGGTCATACTGGTGATGGTCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: VCFKSTFSSTAILPQ*DTSMTRVILVMVRK Trigger: TTTCCTGACCATCACCAGTATGACCCGGGTCATCGAGGTATCTCACTGGGGCAATATTGCTGTGGAAGAGAACGTGGACTTGAAGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR GCA 90 bp | AGCTTCCTGACCTCTGTATGTTACTTGAAGGAGCAAACAGGCAGATaGTTCCTAGCACGTTCTCAACCACCCAACACCAACCCCCACATC | + |
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Preference number: 1 (lower is better) Translates to: SFLTSVCYLKEQTGR*FLARSQPPNTNPHI Trigger: GATGTGGGGGTTGGTGTTGGGTGGTTGAGAACGTGCTAGGAAGCATCTGCCTGTTTGCTCCTTCAAGTAACATACAGAGGTCAGGAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | ATAAACCACATGACATCCCCAACCACATATCTCCTTGTCAGGTTCTaGGCTGTCTGTGGACATCCTATTTGGAGCTCTCAGGCGTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: INHMTSPTTYLLVRF*AVCGHPIWSSQASH Trigger: ATGAGACGCCTGAGAGCTCCAAATAGGATGTCCACAGACAGCCCAGAACCTGACAAGGAGATATGTGGTTGGGGATGTCATGTGGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | CACATTTCGGGACGCCAGTTTCACTCGCATGGTCTGGGTCTTTGTTaGATAGGGAGAGTAGAAATAATGGTTGCCCTCAAACACGACGAA | + |
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Preference number: 1 (lower is better) Translates to: HISGRQFHSHGLGLC*IGRVEIMVALKHDE Trigger: TTCGTCGTGTTTGAGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTGAAACTGGCGTCCCGAAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR CCA 90 bp | TTGACCTGGATTACAATATGCTCCTGGCTTTCTCATACCAAACTCTaGCTGTGTTTTCAACCAAAACAGCCCTGGCCCAGTGCTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: LTWITICSWLSHTKL*LCFQPKQPWPSAQS Trigger: AGACTGAGCACTGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAGCCAGGAGCATATTGTAATCCAGGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 90 bp | GCTTGGTATAGCTTTCCACATTTCGGGACGCCAGTTTCACTCGCATaGTCTGGGTCTTTGTTGGATAGGGAGAGTAGAAATAATGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: AWYSFPHFGTPVSLA*SGSLLDRESRNNGC Trigger: GCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTGAAACTGGCGTCCCGAAATGTGGAAAGCTATACCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR TCA 90 bp | GTTCTCAACCACCCAACACCAACCCCCACATCTGGGTATCATCTTTaGCCTGGATTACAATATGCTCCTGGCTTTCTCATACCAAACTCT | + |
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Preference number: 1 (lower is better) Translates to: VLNHPTPTPTSGYHL*PGLQYAPGFLIPNS Trigger: AGAGTTTGGTATGAGAAAGCCAGGAGCATATTGTAATCCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGTGTTGGGTGGTTGAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR GCA 90 bp | GCATGGTCTGGGTCTTTGTTGGATAGGGAGAGTAGAAATAATGGTTaGCCTCAAACACGACGAACTGTTTCTCTGACTGAGTTATCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AWSGSLLDRESRNNG*PQTRRTVSLTELSE Trigger: CTCAGATAACTCAGTCAGAGAAACAGTTCGTCGTGTTTGAGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR TCA 90 bp | AGAGTAGAAATAATGGTTGCCCTCAAACACGACGAACTGTTTCTCTaGCTGAGTTATCTGAGTCGGATACGGATGAAGCACATGGGTGTA | + |
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Preference number: 1 (lower is better) Translates to: RVEIMVALKHDELFL*LSYLSRIRMKHMGV Trigger: TACACCCATGTGCTTCATCCGTATCCGACTCAGATAACTCAGTCAGAGAAACAGTTCGTCGTGTTTGAGGGCAACCATTATTTCTACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR GCA 90 bp | TTTCCATTCAATAAATGCTTTCTTAAAGAGAGAGTCTCTCCACATTaGTCTGATCTCAAATTTCTTTGTTCAGTGATCCTCAGCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: FPFNKCFLKERVSPH*SDLKFLCSVILSLL Trigger: TAGAAGGCTGAGGATCACTGAACAAAGAAATTTGAGATCAGAGCAATGTGGAGAGACTCTCTCTTTAAGAAAGCATTTATTGAATGGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCGCAGTGCCACGGATAGGCCACTGCCACGGACAGGCCTCAGTGGTGTCTTGGGAAGTCTAGGCACCTaGGCCTGCTCTGGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SRSATDRPLPRTGLSGVLGSLGT*ACSGAR Trigger: CCTGGCTCCAGAGCAGGCCCAGGTGCCTAGACTTCC...CAAGACACCACTGAGGCCTGTCCGTGGCAGTGGCCTATCCGTGGCACTGCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCCTCTGGTAATCGTAGCGGGAGAAAGGCCCCTTCAGCACTGCGCCCGTCCAGTTTCACTCGCATaGTCTGGGTCTTTGTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: RLPLVIVAGERPLQHCARPVSLA*SGSLLD Trigger: ATCCAACAAAGACCCAGACCATGCGAGTGAAACTGG...ACGGGCGCAGTGCTGAAGGGGCCTTTCTCCCGCTACGATTACCAGAGGCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTGCTGACACTGCCCACTGCCTaGAACACTGGCCTGCACGGT | + |
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Preference number: 2 (lower is better) Translates to: GTPTHHNLHPISLTNFVLTLPTA*NTGLHG Trigger: ACCGTGCAGGCCAGTGTTCCAGGCAGTGGGCAGTGT...CAGCACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR GCA 90 bp | GTAATCGTAGCGGGAGAAAGGCCCCTTCAGCACTGCGCCCGTGTGCTTCAAGTCCTTCCACAGCAATATTaGCCCAGTGAGATACCTCGA | + |
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Preference number: 2 (lower is better) Translates to: VIVAGERPLQHCARVLQVLPQQY*PSEIPR Trigger: TCGAGGTATCTCACTGGGGCAATATTGCTGTGGAAG...GACTTGAAGCACACGGGCGCAGTGCTGAAGGGGCCTTTCTCCCGCTACGATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACAACACACACTGCCCACTaGCTGGAACACTGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LDLHLCSPVITCNIHSSTTHTAH*LEHWPA Trigger: TGCAGGCCAGTGTTCCAGGCAGTGGGCAGTGTGTGT...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCAACCACCCAACACCAACCCCCACATCTGGGTATCATCTTTGACCTGGATGGTGTCTTGAGGCCTTaGGCTAACCACAACCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FSTTQHQPPHLGIIFDLDGVLRP*ANHNLL Trigger: GAGGAGGTTGTGGTTAGCCCAAGGCCTCAAGACACC...ATCCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGTGTTGGGTGGTTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CAA 90 bp | AGCCTGACTCAGTCAGGTGACAGCTTCCTGACCTCTGTATGTTACTaGAAGGAGCAAACAGGCAGATGCTTCCTAGCACGTTCTCAACCA | + |
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Preference number: 2 (lower is better) Translates to: SLTQSGDSFLTSVCY*KEQTGRCFLARSQP Trigger: TGGTTGAGAACGTGCTAGGAAGCATCTGCCTGTTTGCTCCTTCAAGTAACATACAGAGGTCAGGAAGCTGTCACCTGACTGAGTCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CAA 90 bp | CCACATTTCGGGACGCCAGTTTCACTCGCATGGTCTGGGTCTTTGTaGGATAGGGAGAGTAGAAATAATGGTTGCCCTCAAACACGACGA | + |
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Preference number: 2 (lower is better) Translates to: PHFGTPVSLAWSGSL*DRESRNNGCPQTRR Trigger: TCGTCGTGTTTGAGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTGAAACTGGCGTCCCGAAATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTACCAACCCCCACATCTaGGTATCATCTTTGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: HGHTYPPQSPSHFPNQLCTNPHI*VSSLTW Trigger: CCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGT...ACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR GCA 90 bp | ATATCCTGCCACGAATGCCCTAGGTGTCTTCTAATTCTACATTCTTCATGGGCAACAGCCCTGGCCCAGTaGTCAGTCTGCCCTGATATA | + |
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Preference number: 2 (lower is better) Translates to: ISCHECPRCLLILHSSWATALAQ*SVCPDI Trigger: TATATCAGGGCAGACTGAGCACTGGGCCAGGGCTGT...TGCCCATGAAGAATGTAGAATTAGAAGACACCTAGGGCATTCGTGGCAGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTGCTGCCCGTTTCTCAAAACTaGCCCATAGTTCTCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GTPTHHNLHPISLTNFVLPVSQN*PIVLCS Trigger: AGAACAGAGAACTATGGGCCAGTTTTGAGAAACGGG...CAGCACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CAA 90 bp | TTTCCACATTTCGGGACGCCAGTTTCACTCGCATGGTCTGGGTCTTaGTTGGATAGGGAGAGTAGAAATAATGGTTGCCCTCAAACACGA | + |
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Preference number: 2 (lower is better) Translates to: FPHFGTPVSLAWSGS*LDRESRNNGCPQTR Trigger: TCGTGTTTGAGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTGAAACTGGCGTCCCGAAATGTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACACTTGTATCAGTGTTCTaGCACTTGCCTTGCACACAC | + |
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Preference number: 2 (lower is better) Translates to: LDLHLCSPVITCNIHSSTLVSVF*HLPCTH Trigger: GTGTGTGCAAGGCAAGTGTCAGAACACTGATACAAG...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGATGGTCTTAAAAGAACGAATGGAGGAGATCCCACTGTCAGGCTGCCTCGGTCTGGGTCTTTGTTaGATAGGGAGAGTAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: GRMVLKERMEEIPLSGCLGLGLC*IGRVEI Trigger: TATTTCTACTCTCCCTATCCAACAAAGACCCAGACC...GAGGCAGCCTGACAGTGGGATCTCCTCCATTCGTTCTTTTAAGACCATCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACACAGTGTTCTGACACTTaGCTTGCACACACAACAAGA | + |
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Preference number: 2 (lower is better) Translates to: LDLHLCSPVITCNIHSSTQCSDT*LAHTTR Trigger: TCTTGTTGTGTGTGCAAGGCAAGTGTCAGAACACTG...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 72 bp | GGGCCCTTCACACACACTGCCCACTGCCTGGAACACTaGCCTGCACGGTTCTTAAGGCTCAGCTCTGGACTC | + |
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Preference number: 3 (lower is better) Translates to: GPFTHTAHCLEH*PARFLRLSSGL Trigger: GAGTCCAGAGCTGAGCCTTAAGAACCGTGCAGGCCAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR GCA 72 bp | CTTCACACACACTGCCCACTGCCTGGAACACTGGCCTaGACGGTTCTTAAGGCTCAGCTCTGGACTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LHTHCPLPGTLA*TVLKAQLWTPL Trigger: GAGGGGAGTCCAGAGCTGAGCCTTAAGAACCGTGCAGGCCAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR GCA 72 bp | TGGGCTAACCACAACCTCCTCTTTCTACCTATCCAATaGCACTGGAAGTCTAGGCACCTGGGCCTGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WANHNLLFLPIQ*HWKSRHLGLLW Trigger: CCAGAGCAGGCCCAGGTGCCTAGACTTCCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGTTAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 72 bp | TTAAGGAATACAAAGGCTCACTCCACCCCTGTTGTGTaGCCTCCGGACCTTACTGGGCCTCTCGAGACTTGT | + |
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Preference number: 3 (lower is better) Translates to: LRNTKAHSTPVV*PPDLTGPLETC Trigger: ACAAGTCTCGAGAGGCCCAGTAAGGTCCGGAGGCCACACAACAGGGGTGGAGTGAGCCTTTGTATTCCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR TCA 72 bp | TGTGCAGGAGGTGCACGAGAGCCTGACTCAGTCAGGTaGCAGCTTCCTGACCTCTGTATGTTACTTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: CAGGAREPDSVR*QLPDLCMLLEG Trigger: TCCTTCAAGTAACATACAGAGGTCAGGAAGCTGTCACCTGACTGAGTCAGGCTCTCGTGCACCTCCTGCACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 72 bp | ATAACCTGTAATATCCACTCTAGTACAGGCCCTCTGTaGGTCCTCAAGCACCAGGGCCCTTCACACACACTG | + |
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Preference number: 3 (lower is better) Translates to: ITCNIHSSTGPL*VLKHQGPSHTL Trigger: CAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACCCACAGAGGGCCTGTACTAGAGTGGATATTACAGGTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGATGGTCTTAAAAGAACGAATGGAGGAGATCCCACTGTCAGGCTGCCTCGCATGGTCTGGGTCTTaGTTGGATAGGGAGAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: GRMVLKERMEEIPLSGCLAWSGS*LDRESR Trigger: TCTACTCTCCCTATCCAACAAAGACCCAGACCATGC...GAGGCAGCCTGACAGTGGGATCTCCTCCATTCGTTCTTTTAAGACCATCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR TCA 72 bp | AAGTCCACGTTCTCTTCCACAGCAATATTGCCCCAGTaGGATACCTCGATGACCCGGGTCATACTGGTGATG | + |
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Preference number: 3 (lower is better) Translates to: KSTFSSTAILPQ*DTSMTRVILVM Trigger: CATCACCAGTATGACCCGGGTCATCGAGGTATCTCACTGGGGCAATATTGCTGTGGAAGAGAACGTGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR CCA 72 bp | ATGACATCCCCAACCACATATCTCCTTGTCAGGTTCTaGGCTGTCTGTGGACATCCTATTTGGAGCTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: MTSPTTYLLVRF*AVCGHPIWSSQ Trigger: CTGAGAGCTCCAAATAGGATGTCCACAGACAGCCCAGAACCTGACAAGGAGATATGTGGTTGGGGATGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 72 bp | TGCTCGCCCATCACAGTTTCTAATGCTCAGCACGTGTaGCACAGATTTAAGGAATACAAAGGCTCACTCCAC | + |
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Preference number: 3 (lower is better) Translates to: CSPITVSNAQHV*HRFKEYKGSLH Trigger: GTGGAGTGAGCCTTTGTATTCCTTAAATCTGTGCCACACGTGCTGAGCATTAGAAACTGTGATGGGCGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 72 bp | CTTGTCAGGTTCTGGGCTGTCTGTGGACATCCTATTTaGAGCTCTCAGGCGTCTCATGATTGGTATCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LVRFWAVCGHPI*SSQASHDWYQK Trigger: TTTCTGATACCAATCATGAGACGCCTGAGAGCTCCAAATAGGATGTCCACAGACAGCCCAGAACCTGACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| 3UTR CCA 72 bp | AGCTTTCCACATTTCGGGACGCCAGTTTCACTCGCATaGTCTGGGTCTTTGTTGGATAGGGAGAGTAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: SFPHFGTPVSLA*SGSLLDRESRN Trigger: ATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTGAAACTGGCGTCCCGAAATGTGGAAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTGTTCTGACACTTGCCTaGCACACACAACAAGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: HGHTYPPQSPSHFPNQLCVLTLA*HTQQEN Trigger: GTTTTCTTGTTGTGTGTGCAAGGCAAGTGTCAGAAC...ACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCAAAACAGCCCTGGCCCATCACAGTGTGGCCAATaGGAGATTATGAACCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: GFLIPNSGCVFNQNSPGPSQCGQ*EIMNHD Trigger: GTCATGGTTCATAATCTCCAATTGGCCACACTGTGA...TGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR TCA 72 bp | ATAATGGTTGCCCTCAAACACGACGAACTGTTTCTCTaGCTGAGTTATCTGAGTCGGATACGGATGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IMVALKHDELFL*LSYLSRIRMKH Trigger: GTGCTTCATCCGTATCCGACTCAGATAACTCAGTCAGAGAAACAGTTCGTCGTGTTTGAGGGCAACCATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| 3UTR GCA 72 bp | GGGTCTTTGTTGGATAGGGAGAGTAGAAATAATGGTTaGCCTCAAACACGACGAACTGTTTCTCTGACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSLLDRESRNNG*PQTRRTVSLTE Trigger: CTCAGTCAGAGAAACAGTTCGTCGTGTTTGAGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| 3UTR CCA 72 bp | ATTACAATATGCTCCTGGCTTTCTCATACCAAACTCTaGCTGTGTTTTCAACCAAAACAGCCCTGGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ITICSWLSHTKL*LCFQPKQPWPS Trigger: ACTGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAGCCAGGAGCATATTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR CCA 72 bp | TTGGTATCAGAAACCAGTCCACCCGTTTCTCAAAACTaGCCCATAGTTCTCTGTTCTCAGTGGATGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LVSETSPPVSQN*PIVLCSQWMVQ Trigger: TTGTACCATCCACTGAGAACAGAGAACTATGGGCCAGTTTTGAGAAACGGGTGGACTGGTTTCTGATACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR CCA 72 bp | GAATGCCCTAGGTGTCTTCTAATTCTACATTCTTCATaGGCACACCTACCCACCACAATCTCCATCCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ECPRCLLILHSS*AHLPTTISIPF Trigger: AAATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATGAAGAATGTAGAATTAGAAGACACCTAGGGCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR CCA 72 bp | AACACCAACCCCCACATCTGGGTATCATCTTTGACCTaGATTACAATATGCTCCTGGCTTTCTCATACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NTNPHIWVSSLT*ITICSWLSHTK Trigger: TTTGGTATGAGAAAGCCAGGAGCATATTGTAATCCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAATTCTACATTCTTCATGGGCACACCTACCCACCACAATCTCCATCCCATTATCTGGGTATCATCTTaGACCTGGATTACAATATGC | + |
|
Preference number: 3 (lower is better) Translates to: SNSTFFMGTPTHHNLHPIIWVSS*TWITIC Trigger: GCATATTGTAATCCAGGTCAAAGATGATACCCAGAT...AATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATGAAGAATGTAGAATTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR CCA 72 bp | TGGGTATCATCTTTGACCTGGATTACAATATGCTCCTaGCTTTCTCATACCAAACTCTGGCTGTGTTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WVSSLTWITICS*LSHTKLWLCFQ Trigger: TTGAAAACACAGCCAGAGTTTGGTATGAGAAAGCCAGGAGCATATTGTAATCCAGGTCAAAGATGATACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCTCAAGCACCAGGGCCCTTCACACACACTGCCCACTGCCTGGAACACTGCCCGGGTCATACTGGTaGTGGTCAGGAAAGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSSTRALHTHCPLPGTLPGSYW*WSGKGY Trigger: ATAGCCCTTTCCTGACCATCACCAGTATGACCCGGG...CAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | CACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACAGGCCCTCTGGCTTCACGTCCTCGTTaGCCAGCGGCGGAGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLCSPVITCNIHSSTGPLASRPR*PAAEPP Trigger: CGGAGGCTCCGCCGCTGGTCAACGAGGACGTGAAGC...CAGAGGGCCTGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | TCCCGCAGTGCCACGGATAGGCCACTGCCACGGACAGGCCTCAGTGGTGTCTTGCCTGGCTTCTGCAGCTaGATCCTTGGTGATGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSATDRPLPRTGLSGVLPGFCS*ILGDGK Trigger: TTTTCCATCACCAAGGATCCAGCTGCAGAAGCCAGG...CAAGACACCACTGAGGCCTGTCCGTGGCAGTGGCCTATCCGTGGCACTGCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTTAAAAGAACGAATGGAGGAGATCCCACTGTCAGGCTGCCTCTGGTAATCGCTTCACGTCCTCGTTaGCCAGCGGCGGAGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLKRTNGGDPTVRLPLVIASRPR*PAAEPP Trigger: CGGAGGCTCCGCCGCTGGTCAACGAGGACGTGAAGC...GATTACCAGAGGCAGCCTGACAGTGGGATCTCCTCCATTCGTTCTTTTAAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| CDS-3UTR TCA 90 bp | CACTCGCATGGTCTGGGTCTTTGTTGGATAGGGAGAGTAGAAATAATGGTTGCCGAAAGAGCTGGCTCGTaGTGTGGAGCCGCCGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSHGLGLCWIGRVEIMVAERAGS*CGAAAR Trigger: CCGGGCGGCGGCTCCACATCACGAGCCAGCTCTTTC...GGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAACCTCCTCTTTCTACCTATCCAATGCCACTGGAAGTCTAGGCACCTGGCCTGTCACACAGGTCTaGGCCCTCCGTCTTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTTSSFYLSNATGSLGTWPVTQV*ALRLQP Trigger: CGGCTGAAGACGGAGGGCTCAGACCTGTGTGACAGG...CCAGGTGCCTAGACTTCCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | CGGATGAAGCACATGGGTGTAGACAGTTTCCACAACGACCGAGATCTTGGACCCCCTCAGCCGTCACCTTaGCTAGGTGGCTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RMKHMGVDSFHNDRDLGPPQPSP*LGGCSG Trigger: ACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGG...GGGTCCAAGATCTCGGTCGTTGTGGAAACTGTCTACACCCATGTGCTTCATCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACAAGCTGGCTCGTGATGTaGAGCCGCCGCCCGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LDLHLCSPVITCNIHSSTSWLVM*SRRPGV Trigger: TACACCCGGGCGGCGGCTCCACATCACGAGCCAGCT...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTGTAGGCAGGGATGTCTTTAAAAGGCCCATAATCAAGGACGTCCTCAGAAGCTGGCTCGTGATGTaGAGCCGCCGCCCGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTVGRDVFKRPIIKDVLRSWLVM*SRRPGV Trigger: TACACCCGGGCGGCGGCTCCACATCACGAGCCAGCT...TCTGAGGACGTCCTTGATTATGGGCCTTTTAAAGACATCCCTGCCTACAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| CDS-3UTR TCA 90 bp | ATATCCTGCCACGAATGCCCTAGGTGTCTTCTAATTCTACATTCTTCATGGGCAGAAAGAGCTGGCTCGTaGTGTGGAGCCGCCGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCHECPRCLLILHSSWAERAGS*CGAAAR Trigger: CCGGGCGGCGGCTCCACATCACGAGCCAGCTCTTTC...TGCCCATGAAGAATGTAGAATTAGAAGACACCTAGGGCATTCGTGGCAGGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | CACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACAGGCCCTCTGGGCCCAGCCTCTTGTTaGCCAGGGTTAAGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLCSPVITCNIHSSTGPLGPASC*PGLRPA Trigger: AGCAGGTCTTAACCCTGGTCAACAAGAGGCTGGGCC...CAGAGGGCCTGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | GGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTGCTGGGTACGTATCCTTCTTaGGCTTGCCAGCCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTPTHHNLHPISLTNFVLGTYPS*ACQPPA Trigger: GGCTGGTGGCTGGCAAGCTCAAGAAGGATACGTACC...CAGCACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR GCA 90 bp | CAACCACCCAACACCAACCCCCACATCTGGGTATCATCTTTGACCTGGATTACAAGGCCCCTTCAGCACTaGGCCCGTGTGCTTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPPNTNPHIWVSSLTWITRPLQH*ARVLQV Trigger: GACTTGAAGCACACGGGCGCAGTGCTGAAGGGGCCT...TGTAATCCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGTGTTGGGTGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCAAAACAGCCCTGGCCCAGTCCGCGACTCCAGTTCTaGCTCCAGGGCCAGAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHTKLWLCFQPKQPWPSPRLQF*LQGQNE Trigger: TTCGTTCTGGCCCTGGAGCCAGAACTGGAGTCGCGG...ACTGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCAACCACCCAACACCAACCCCCACATCTGGGTATCATCTTTGACCTGGATTGTGGTCGATCTTGGTaGCCAGCTCCTGGCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSTTQHQPPHLGIIFDLDCGRSW*PAPGVF Trigger: GAAAACGCCAGGAGCTGGTCACCAAGATCGACCACA...ATCCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGTGTTGGGTGGTTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR GCA 90 bp | GGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTGCTGACCAGGGTTAAGACCTaGTCTGTGATACAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GTPTHHNLHPISLTNFVLTRVKT*SVIQAT Trigger: AGTGGCCTGTATCACAGAGCAGGTCTTAACCCTGGT...CAGCACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATTCTACATTCTTCATGGGCACACCTACCCACCACAATCTCCATCCCATTCCTCAGCCGTCACCTTaGCTAGGTGGCTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNSTFFMGTPTHHNLHPIPQPSP*LGGCSG Trigger: ACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGG...AATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATGAAGAATGTAGAATTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | CATGGGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTAGGCCACTTTCATCCTaGCTTCTGCAGCTGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGHTYPPQSPSHFPNQLCRPLSS*LLQLDP Trigger: AGGATCCAGCTGCAGAAGCCAGGATGAAAGTGGCCT...ACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACACTGGTCACAGCCTTGTaGTCTGTCTCTAGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDLHLCSPVITCNIHSSTLVTAL*SVSRLF Trigger: GAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAG...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | AACCACAACCTCCTCTTTCTACCTATCCAATGCCACTGGAAGTCTAGGCACCTGCAACGACCGAGATCTTaGACCCAGGATCAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NHNLLFLPIQCHWKSRHLQRPRS*TQDQEQ Trigger: TTGCTCTTGATCCTGGGTCCAAGATCTCGGTCGTTG...CAGGTGCCTAGACTTCCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCAAAACAGCCCTGGCCCAGTAGAGCATCCAGGATGTaGTCGATCTTGGTGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSHTKLWLCFQPKQPWPSRASRM*SILVTS Trigger: GCTGGTCACCAAGATCGACCACATCCTGGATGCTCT...ACTGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR CAA 72 bp | GTTCTCCAGTCCATGACTTCCTCACAGTGTGGCCAATaGGAGATTATGAACCATGACTGCTCGCCCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLQSMTSSQCGQ*EIMNHDCSPIT Trigger: TGTGATGGGCGAGCAGTCATGGTTCATAATCTCCAATTGGCCACACTGTGAGGAAGTCATGGACTGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR CAA 72 bp | GGGACGCCAGTTTCACTCGCATGGTCTGGGTCTTTGTaGGATAGGGAGAGTAGAAATAATGGTTGCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTPVSLAWSGSL*DRESRNNGCPQ Trigger: TTGAGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTGAAACTGGCGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| 3UTR CAA 72 bp | TTCGGGACGCCAGTTTCACTCGCATGGTCTGGGTCTTaGTTGGATAGGGAGAGTAGAAATAATGGTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGTPVSLAWSGS*LDRESRNNGCP Trigger: AGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCATGCGAGTGAAACTGGCGTCCCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCAAAACAGCCCTGGCCCACCAGTTTCACTCGCATaGTCTGGGTCTTTGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLIPNSGCVFNQNSPGPPVSLA*SGSLLD Trigger: ATCCAACAAAGACCCAGACCATGCGAGTGAAACTGG...TGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAACCTCCTCTTTCTACCTATCCAATGCCACTGGAAGTCTAGGCACCTGGTCCAAGATAAGGAGGTaGCTGGTGGAAACATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: TTTSSFYLSNATGSLGTWSKIRR*LVETLP Trigger: TGGTAATGTTTCCACCAGCCACCTCCTTATCTTGGA...CCAGGTGCCTAGACTTCCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| 3UTR CAA 72 bp | CCACCCAACACCAACCCCCACATCTGGGTATCATCTTaGACCTGGATTACAATATGCTCCTGGCTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPNTNPHIWVSS*TWITICSWLSH Trigger: ATGAGAAAGCCAGGAGCATATTGTAATCCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGTGTTGGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGCCACGAATGCCCTAGGTGTCTTCTAATTCTACATTCTTCATGGGCATCTTCTCCCTTTATCTaGACGCCTAGGTGCGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISCHECPRCLLILHSSWASSPFI*TPRCAS Trigger: GCTTGCGCACCTAGGCGTGCAGATAAAGGGAGAAGA...TGCCCATGAAGAATGTAGAATTAGAAGACACCTAGGGCATTCGTGGCAGGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | ATATCCTGCCACGAATGCCCTAGGTGTCTTCTAATTCTACATTCTTCATGGGCATGCACCACAATGTCCTaGATGTGTTGCTCGACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISCHECPRCLLILHSSWACTTMS*MCCSTR Trigger: TCTCGTCGAGCAACACATTCAGGACATTGTGGTGCA...TGCCCATGAAGAATGTAGAATTAGAAGACACCTAGGGCATTCGTGGCAGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR TCA 90 bp | CAACTGCTGAAACGCCTGTGCTCAAAACACAGCCAAGTTTGTCTTTTAAACAGACTCCTGGCGTTTTCCTaGGCTGAGCTTCTCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLKRLCSKHSQVCLLNRLLAFS*AELLVF Trigger: GAAAACGAGAAGCTCAGCTCAGGAAAACGCCAGGAG...TCTGTTTAAAAGACAAACTTGGCTGTGTTTTGAGCACAGGCGTTTCAGCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | TATCAGTGTTCTGACACTTGCCTTGCACACACAACAAGAAAACCCATCTTGATATTGGTGACCAGCTCCTaGCGTTTTCCTGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YQCSDTCLAHTTRKPILILVTSS*RFPELS Trigger: GCTCAGCTCAGGAAAACGCCAGGAGCTGGTCACCAA...TATCAAGATGGGTTTTCTTGTTGTGTGTGCAAGGCAAGTGTCAGAACACTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCAACCACCCAACACCAACCCCCACATCTGGGTATCATCTTTGACCTGGATAGTAGAAATAATGGTTaGCCTCAAACACGACGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FSTTQHQPPHLGIIFDLDSRNNG*PQTRRT Trigger: AGTTCGTCGTGTTTGAGGGCAACCATTATTTCTACT...ATCCAGGTCAAAGATGATACCCAGATGTGGGGGTTGGTGTTGGGTGGTTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGCCACGAATGCCCTAGGTGTCTTCTAATTCTACATTCTTCATGGGCATTTCATCCTGGCTTCTaGAGCTGGATCCTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISCHECPRCLLILHSSWAFHPGF*SWILGD Trigger: ATCACCAAGGATCCAGCTGCAGAAGCCAGGATGAAA...TGCCCATGAAGAATGTAGAATTAGAAGACACCTAGGGCATTCGTGGCAGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACAGGTCTGGGTCTTTGTTaGATAGGGAGAGTAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LDLHLCSPVITCNIHSSTGLGLC*IGRVEI Trigger: TATTTCTACTCTCCCTATCCAACAAAGACCCAGACC...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR GCA 90 bp | GGATTACAATATGCTCCTGGCTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCTTCCACAGCAATATTaGCCCAGTGAGATACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLQYAPGFLIPNSGCVFNLPQQY*PSEIPR Trigger: TCGAGGTATCTCACTGGGGCAATATTGCTGTGGAAG...GTTGAAAACACAGCCAGAGTTTGGTATGAGAAAGCCAGGAGCATATTGTAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CCA 90 bp | TATCAGTGTTCTGACACTTGCCTTGCACACACAACAAGAAAACCCATCTTGATAAGGATCAAGAGCAACTaGGAGCTTGACCGTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YQCSDTCLAHTTRKPILIRIKSN*ELDREK Trigger: TTTTTCACGGTCAAGCTCCCAGTTGCTCTTGATCCT...TATCAAGATGGGTTTTCTTGTTGTGTGTGCAAGGCAAGTGTCAGAACACTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS CCA 90 bp | TGGAGCCGCCGCCCGGGTGTACCAGGACCACCTCAGCCGTCACCTTaGCTAGGTGGCTGCTCAGGTCCACCGTGCGCTTCACGTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WSRRPGVPGPPQPSP*LGGCSGPPCASRPR Trigger: ACGAGGACGTGAAGCGCACGGTGGACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGTGGTCCTGGTACACCCGGGCGGCGGCTCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS CCA 90 bp | CCGCCCGGGTGTACCAGGACCACCTCAGCCGTCACCTTGGCTAGGTaGCTGCTCAGGTCCACCGTGCGCTTCACGTCCTCGTTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGCTRTTSAVTLAR*LLRSTVRFTSSLTS Trigger: GCTGGTCAACGAGGACGTGAAGCGCACGGTGGACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGTGGTCCTGGTACACCCGGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS TCA 90 bp | CGACTCCAGTTCTGGCTCCAGGGCCAGAACGAAAGAGCTGGCTCGTaGTGTGGAGCCGCCGCCCGGGTGTACCAGGACCACCTCAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLQFWLQGQNERAGS*CGAAARVYQDHLSR Trigger: ACGGCTGAGGTGGTCCTGGTACACCCGGGCGGCGGCTCCACATCACGAGCCAGCTCTTTCGTTCTGGCCCTGGAGCCAGAACTGGAGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
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| CDS CCA 90 bp | CCAGTTCTGGCTCCAGGGCCAGAACGAAAGAGCTGGCTCGTGATGTaGAGCCGCCGCCCGGGTGTACCAGGACCACCTCAGCCGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PVLAPGPERKSWLVM*SRRPGVPGPPQPSP Trigger: AGGTGACGGCTGAGGTGGTCCTGGTACACCCGGGCGGCGGCTCCACATCACGAGCCAGCTCTTTCGTTCTGGCCCTGGAGCCAGAACTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
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| CDS-3UTR CAA 90 bp | AGGCTGCCTCTGGTAATCGTAGCGGGAGAAAGGCCCCTTCAGCACTGCGCCCGTCGCTTCACGTCCTCGTaGACCAGCGGCGGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPLVIVAGERPLQHCARRFTSS*TSGGAS Trigger: GGAGGCTCCGCCGCTGGTCAACGAGGACGTGAAGCG...ACGGGCGCAGTGCTGAAGGGGCCTTTCTCCCGCTACGATTACCAGAGGCAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| CDS GCA 90 bp | ACCGCCGACTTCAGGACCAGCTCCTTGACCTGGGCGTCCAGCTTCTaGATCTCACTCACCCTGTCACACAGGTCTGAGCCCTCCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TADFRTSSLTWASSF*ISLTLSHRSEPSVF Trigger: GAAGACGGAGGGCTCAGACCTGTGTGACAGGGTGAGTGAGATGCAGAAGCTGGACGCCCAGGTCAAGGAGCTGGTCCTGAAGTCGGCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | TCCCGCAGTGCCACGGATAGGCCACTGCCACGGACAGGCCTCAGTGGTGTCTTGGTCTCTAGGCTCTTCTaGCCACTGTTGAGGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSATDRPLPRTGLSGVLVSRLF*PLLRVE Trigger: CTCTACCCTCAACAGTGGCAAGAAGAGCCTAGAGAC...CAAGACACCACTGAGGCCTGTCCGTGGCAGTGGCCTATCCGTGGCACTGCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS TCA 90 bp | CTGGGCGTCCAGCTTCTGCATCTCACTCACCCTGTCACACAGGTCTaGGCCCTCCGTCTTCAGCCGAGACTGCAGTACAGCAATCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGVQLLHLTHPVTQV*ALRLQPRLQYSNLA Trigger: AGCGAGATTGCTGTACTGCAGTCTCGGCTGAAGACGGAGGGCTCAGACCTGTGTGACAGGGTGAGTGAGATGCAGAAGCTGGACGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS GCA 90 bp | TTCCAGGTACGTATCCTTCTTGAGCTTGCCAGCCACCAGCCTCTCTaGTTCTACCGCCGACTTCAGGACCAGCTCCTTGACCTGGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQVRILLELASHQPL*FYRRLQDQLLDLGV Trigger: GACGCCCAGGTCAAGGAGCTGGTCCTGAAGTCGGCGGTAGAAGCAGAGAGGCTGGTGGCTGGCAAGCTCAAGAAGGATACGTACCTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS CCA 90 bp | AGCCTCTCTGCTTCTACCGCCGACTTCAGGACCAGCTCCTTGACCTaGGCGTCCAGCTTCTGCATCTCACTCACCCTGTCACACAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSASTADFRTSSLT*ASSFCISLTLSHRS Trigger: AGACCTGTGTGACAGGGTGAGTGAGATGCAGAAGCTGGACGCCCAGGTCAAGGAGCTGGTCCTGAAGTCGGCGGTAGAAGCAGAGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | TCCCGCAGTGCCACGGATAGGCCACTGCCACGGACAGGCCTCAGTGGTGTCTTGAGAGCAACTGGGAGCTaGACCGTGAAAAATCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSATDRPLPRTGLSGVLRATGS*TVKNLP Trigger: TGGGAGATTTTTCACGGTCAAGCTCCCAGTTGCTCT...CAAGACACCACTGAGGCCTGTCCGTGGCAGTGGCCTATCCGTGGCACTGCGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS CCA 90 bp | CTGAGCCCTCCGTCTTCAGCCGAGACTGCAGTACAGCAATCTCGCTaGTCACAGCCTTGTGCTCTGTCTCTAGGCTCTTCTTGCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPPSSAETAVQQSR*SQPCALSLGSSCHC Trigger: ACAGTGGCAAGAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAGCGAGATTGCTGTACTGCAGTCTCGGCTGAAGACGGAGGGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCAAAACAGCCCTGGCCCAGTCGCTTCACGTCCTCGTaGACCAGCGGCGGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSHTKLWLCFQPKQPWPSRFTSS*TSGGAS Trigger: GGAGGCTCCGCCGCTGGTCAACGAGGACGTGAAGCG...ACTGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | TCCCGCAGTGCCACGGATAGGCCACTGCCACGGACAGGCCTCAGTGGTGTCTTGATATCCCGGGACTGCTaGTATCTATTGACAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSATDRPLPRTGLSGVLISRDC*YLLTVS Trigger: TGAGACTGTCAATAGATACAAGCAGTCCCGGGATAT...CAAGACACCACTGAGGCCTGTCCGTGGCAGTGGCCTATCCGTGGCACTGCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | CATGGGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTACCTCAGCCGTCACCTaGGCTAGGTGGCTGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGHTYPPQSPSHFPNQLCTSAVT*ARWLLR Trigger: CCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGT...ACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCTCAAGCACCAGGGCCCTTCACACACACTGCCCACTGCCTGGAACACTGTGGTCTGGGTCTTTGTaGGATAGGGAGAGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSSSTRALHTHCPLPGTLWSGSL*DRESRN Trigger: ATTTCTACTCTCCCTATCCAACAAAGACCCAGACCA...CAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCAAGCACCAGGGCCCTTCACACACACTGCCCACTGCCTGGAACACTGGCAGAGAATCTATCACTaGCTCATCAAACACGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GPQAPGPFTHTAHCLEHWQRIYH*LIKHVV Trigger: GACCACGTGTTTGATGAGCAAGTGATAGATTCTCTG...CCAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCTCAAGCACCAGGGCCCTTCACACACACTGCCCACTGCCTGGAACACTGAATGTCCTGAATGTGTaGCTCGACGAGATTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSSTRALHTHCPLPGTLNVLNV*LDEILL Trigger: AAGAAGAATCTCGTCGAGCAACACATTCAGGACATT...CAGTGTTCCAGGCAGTGGGCAGTGTGTGTGAAGGGCCCTGGTGCTTGAGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | GGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTGCTGAGGATGTGGTCGATCTaGGTGACCAGCTCCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GTPTHHNLHPISLTNFVLRMWSI*VTSSWR Trigger: ACGCCAGGAGCTGGTCACCAAGATCGACCACATCCT...CAGCACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS GCA 90 bp | TTCAGCCGAGACTGCAGTACAGCAATCTCGCTGGTCACAGCCTTGTaGTCTGTCTCTAGGCTCTTCTTGCCACTGTTGAGGGTAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: FSRDCSTAISLVTAL*SVSRLFLPLLRVEI Trigger: TATCTCTACCCTCAACAGTGGCAAGAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAGCGAGATTGCTGTACTGCAGTCTCGGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCTGGGTCTTTGTTGGATAGGGAGAGTAGAAATAATGGTTGCCCTCAAACAACCTCAGCCGTCACCTaGGCTAGGTGGCTGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSGSLLDRESRNNGCPQTTSAVT*ARWLLR Trigger: CCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGT...TGTTTGAGGGCAACCATTATTTCTACTCTCCCTATCCAACAAAGACCCAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| CDS-3UTR CAA 90 bp | CTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCAAAACAGCCCTGGCCCAGTAGGCCCAGCCTCTTGTaGACCAGGGTTAAGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSHTKLWLCFQPKQPWPSRPSLL*TRVKTC Trigger: GCAGGTCTTAACCCTGGTCAACAAGAGGCTGGGCCT...ACTGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | CATGGGCACACCTACCCACCACAATCTCCATCCCATTTCCCTAACCAACTTTGTGTATCCTTCTTGAGCTaGCCAGCCACCAGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HGHTYPPQSPSHFPNQLCVSFLS*PATSLS Trigger: AGAGAGGCTGGTGGCTGGCAAGCTCAAGAAGGATAC...ACAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACAAGGTACGTATCCTTCTaGAGCTTGCCAGCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LDLHLCSPVITCNIHSSTRYVSF*SLPATS Trigger: GCTGGTGGCTGGCAAGCTCAAGAAGGATACGTACCT...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS TCA 90 bp | CGTAGGGACTGTCCACCTGGATGTTCTTGGCTCCCTCGGGCAAGATaGTCTTCACTGTCAGAGAATCTATCACTTGCTCATCAAACACGT | + |
|
Preference number: 5 (lower is better) Translates to: RRDCPPGCSWLPRAR*SSLSENLSLAHQTR Trigger: ACGTGTTTGATGAGCAAGTGATAGATTCTCTGACAGTGAAGATCATCTTGCCCGAGGGAGCCAAGAACATCCAGGTGGACAGTCCCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | AGTCGGATACGGATGAAGCACATGGGTGTAGACAGTTTCCACAACGACCGAGATAGAGCAACTGGGAGCTaGACCGTGAAAAATCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRIRMKHMGVDSFHNDRDRATGS*TVKNLP Trigger: TGGGAGATTTTTCACGGTCAAGCTCCCAGTTGCTCT...ATCTCGGTCGTTGTGGAAACTGTCTACACCCATGTGCTTCATCCGTATCCGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204838.2 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACAACAACGACCGAGATCTaGGACCCAGGATCAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDLHLCSPVITCNIHSSTTTTEI*DPGSRA Trigger: TGCTCTTGATCCTGGGTCCAAGATCTCGGTCGTTGT...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | CAACTGCTGAAACGCCTGTGCTCAAAACACAGCCAAGTTTGTCTTTTAAACAGATTCAGGACCAGCTCCTaGACCTGGGCGTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLKRLCSKHSQVCLLNRFRTSS*TWASSF Trigger: GAAGCTGGACGCCCAGGTCAAGGAGCTGGTCCTGAA...TCTGTTTAAAAGACAAACTTGGCTGTGTTTTGAGCACAGGCGTTTCAGCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | ACCACAACCTCCTCTTTCTACCTATCCAATGCCACTGGAAGTCTAGGCACCTGGAGAGGTATTCATAGCTaGGGAGGTTGTAACCAACGA | + |
|
Preference number: 5 (lower is better) Translates to: TTTSSFYLSNATGSLGTWRGIHS*GGCNQR Trigger: TCGTTGGTTACAACCTCCCAAGCTATGAATACCTCT...CCAGGTGCCTAGACTTCCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS GCA 90 bp | GCTCCCTCGGGCAAGATGATCTTCACTGTCAGAGAATCTATCACTTaGTCATCAAACACGTGGTCTACAAACCGCATCTTCAGTGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: APSGKMIFTVRESIT*SSNTWSTNRIFSAY Trigger: GTATGCACTGAAGATGCGGTTTGTAGACCACGTGTTTGATGAGCAAGTGATAGATTCTCTGACAGTGAAGATCATCTTGCCCGAGGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGCACCTCTGCAGCCCTGTCATAACCTGTAATATCCACTCTAGTACACGTACTTCTAGGTTGTaGTCTTCCTCATCTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LDLHLCSPVITCNIHSSTRTSRL*SSSSSP Trigger: GGGAGAAGATGAGGAAGACAACAACCTAGAAGTACG...TGTACTAGAGTGGATATTACAGGTTATGACAGGGCTGCAGAGGTGCAAGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | TATCAGTGTTCTGACACTTGCCTTGCACACACAACAAGAAAACCCATCTTGATATCGCTGGTCACAGCCTaGTGCTCTGTCTCTAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YQCSDTCLAHTTRKPILISLVTA*CSVSRL Trigger: GAGCCTAGAGACAGAGCACAAGGCTGTGACCAGCGA...TATCAAGATGGGTTTTCTTGTTGTGTGTGCAAGGCAAGTGTCAGAACACTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | AACCACAACCTCCTCTTTCTACCTATCCAATGCCACTGGAAGTCTAGGCACCTGTCTCGTACTTCTAGGTaGTTGTCTTCCTCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NHNLLFLPIQCHWKSRHLSRTSR*LSSSSS Trigger: AGAAGATGAGGAAGACAACAACCTAGAAGTACGAGA...CAGGTGCCTAGACTTCCAGTGGCATTGGATAGGTAGAAAGAGGAGGTTGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | TCTAATTCTACATTCTTCATGGGCACACCTACCCACCACAATCTCCATCCCATTGCATGGTCTGGGTCTTaGTTGGATAGGGAGAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SNSTFFMGTPTHHNLHPIAWSGS*LDRESR Trigger: TCTACTCTCCCTATCCAACAAAGACCCAGACCATGC...AATGGGATGGAGATTGTGGTGGGTAGGTGTGCCCATGAAGAATGTAGAATTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | CTGGGTATCATCTTTGACCTGGATTACAATATGCTCCTGGCTTTCTCATACCAACTCTTCTTGCCACTGTaGAGGGTAGAGATATCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGIIFDLDYNMLLAFSYQLFLPL*RVEISR Trigger: CCGGGATATCTCTACCCTCAACAGTGGCAAGAAGAG...TTGGTATGAGAAAGCCAGGAGCATATTGTAATCCAGGTCAAAGATGATACCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CCA 90 bp | CTTCAGTGCATACTGGTCACCCAGATTATAGAGGTATTCATAGCTTaGGAGGTTGTAACCAACGATGTAGTGTGTCTTCCACCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQCILVTQIIEVFIA*EVVTNDVVCLPPSK Trigger: TTTGGAGGGTGGAAGACACACTACATCGTTGGTTACAACCTCCCAAGCTATGAATACCTCTATAATCTGGGTGACCAGTATGCACTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | TATCAGTGTTCTGACACTTGCCTTGCACACACAACAAGAAAACCCATCTTGATATCTGCAGCTGGATCCTaGGTGATGGAAAAGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YQCSDTCLAHTTRKPILISAAGS*VMEKSR Trigger: TCTGGACTTTTCCATCACCAAGGATCCAGCTGCAGA...TATCAAGATGGGTTTTCTTGTTGTGTGTGCAAGGCAAGTGTCAGAACACTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CCA 90 bp | ATGATCTTCACTGTCAGAGAATCTATCACTTGCTCATCAAACACGTaGTCTACAAACCGCATCTTCAGTGCATACTGGTCACCCAGATTA | + |
|
Preference number: 5 (lower is better) Translates to: MIFTVRESITCSSNT*STNRIFSAYWSPRL Trigger: TAATCTGGGTGACCAGTATGCACTGAAGATGCGGTTTGTAGACCACGTGTTTGATGAGCAAGTGATAGATTCTCTGACAGTGAAGATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS-3UTR CAA 90 bp | CTTTCTCATACCAAACTCTGGCTGTGTTTTCAACCAAAACAGCCCTGGCCCAGTCTTTTCCCTTTAATTTaGGTTTCTCGTACTTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHTKLWLCFQPKQPWPSLFPLI*VSRTSR Trigger: CCTAGAAGTACGAGAAACCAAAATTAAAGGGAAAAG...ACTGGGCCAGGGCTGTTTTGGTTGAAAACACAGCCAGAGTTTGGTATGAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS CAA 90 bp | GTGGAGCCGCCGCCCGGGTGTACCAGGACCACCTCAGCCGTCACCTaGGCTAGGTGGCTGCTCAGGTCCACCGTGCGCTTCACGTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VEPPPGCTRTTSAVT*ARWLLRSTVRFTSS Trigger: CGAGGACGTGAAGCGCACGGTGGACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGTGGTCCTGGTACACCCGGGCGGCGGCTCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS CAA 72 bp | CCGCCCGGGTGTACCAGGACCACCTCAGCCGTCACCTaGGCTAGGTGGCTGCTCAGGTCCACCGTGCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPGCTRTTSAVT*ARWLLRSTVRF Trigger: GAAGCGCACGGTGGACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGTGGTCCTGGTACACCCGGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS CCA 72 bp | CGCCCGGGTGTACCAGGACCACCTCAGCCGTCACCTTaGCTAGGTGGCTGCTCAGGTCCACCGTGCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPGVPGPPQPSP*LGGCSGPPCAS Trigger: TGAAGCGCACGGTGGACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGTGGTCCTGGTACACCCGGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS CCA 72 bp | GCTCCAGGGCCAGAACGAAAGAGCTGGCTCGTGATGTaGAGCCGCCGCCCGGGTGTACCAGGACCACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: APGPERKSWLVM*SRRPGVPGPPQ Trigger: CTGAGGTGGTCCTGGTACACCCGGGCGGCGGCTCCACATCACGAGCCAGCTCTTTCGTTCTGGCCCTGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS TCA 72 bp | TTCTGGCTCCAGGGCCAGAACGAAAGAGCTGGCTCGTaGTGTGGAGCCGCCGCCCGGGTGTACCAGGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: FWLQGQNERAGS*CGAAARVYQDH Trigger: GTGGTCCTGGTACACCCGGGCGGCGGCTCCACATCACGAGCCAGCTCTTTCGTTCTGGCCCTGGAGCCAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS CCA 72 bp | TGTACCAGGACCACCTCAGCCGTCACCTTGGCTAGGTaGCTGCTCAGGTCCACCGTGCGCTTCACGTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CTRTTSAVTLAR*LLRSTVRFTSS Trigger: CGAGGACGTGAAGCGCACGGTGGACCTGAGCAGCCACCTAGCCAAGGTGACGGCTGAGGTGGTCCTGGTACA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS CCA 72 bp | ACTCCAGTTCTGGCTCCAGGGCCAGAACGAAAGAGCTaGCTCGTGATGTGGAGCCGCCGCCCGGGTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: TPVLAPGPERKS*LVMWSRRPGVP Trigger: TGGTACACCCGGGCGGCGGCTCCACATCACGAGCCAGCTCTTTCGTTCTGGCCCTGGAGCCAGAACTGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032143.8 ENSMUST00000204838.2 |
||
| CDS CAA 90 bp | GCCACCAGCCTCTCTGCTTCTACCGCCGACTTCAGGACCAGCTCCTaGACCTGGGCGTCCAGCTTCTGCATCTCACTCACCCTGTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: ATSLSASTADFRTSS*TWASSFCISLTLSH Trigger: GTGTGACAGGGTGAGTGAGATGCAGAAGCTGGACGCCCAGGTCAAGGAGCTGGTCCTGAAGTCGGCGGTAGAAGCAGAGAGGCTGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS GCA 72 bp | TTCAGGACCAGCTCCTTGACCTGGGCGTCCAGCTTCTaGATCTCACTCACCCTGTCACACAGGTCTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FRTSSLTWASSF*ISLTLSHRSEP Trigger: GGGCTCAGACCTGTGTGACAGGGTGAGTGAGATGCAGAAGCTGGACGCCCAGGTCAAGGAGCTGGTCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
||
| CDS TCA 72 bp | CAGCTTCTGCATCTCACTCACCCTGTCACACAGGTCTaGGCCCTCCGTCTTCAGCCGAGACTGCAGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: QLLHLTHPVTQV*ALRLQPRLQYS Trigger: GCTGTACTGCAGTCTCGGCTGAAGACGGAGGGCTCAGACCTGTGTGACAGGGTGAGTGAGATGCAGAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS GCA 72 bp | CGTATCCTTCTTGAGCTTGCCAGCCACCAGCCTCTCTaGTTCTACCGCCGACTTCAGGACCAGCTCCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: RILLELASHQPL*FYRRLQDQLLD Trigger: GTCAAGGAGCTGGTCCTGAAGTCGGCGGTAGAAGCAGAGAGGCTGGTGGCTGGCAAGCTCAAGAAGGATACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 90 bp | CCTGAGCTGAGCTTCTCGTTTTCCAGGTACGTATCCTTCTTGAGCTaGCCAGCCACCAGCCTCTCTGCTTCTACCGCCGACTTCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: PELSFSFSRYVSFLS*PATSLSASTADFRT Trigger: GGTCCTGAAGTCGGCGGTAGAAGCAGAGAGGCTGGTGGCTGGCAAGCTCAAGAAGGATACGTACCTGGAAAACGAGAAGCTCAGCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CCA 72 bp | CCGTCTTCAGCCGAGACTGCAGTACAGCAATCTCGCTaGTCACAGCCTTGTGCTCTGTCTCTAGGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSSAETAVQQSR*SQPCALSLGSS Trigger: AGAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAGCGAGATTGCTGTACTGCAGTCTCGGCTGAAGACGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | AGCTTCTCGTTTTCCAGGTACGTATCCTTCTTGAGCTaGCCAGCCACCAGCCTCTCTGCTTCTACCGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: SFSFSRYVSFLS*PATSLSASTAD Trigger: GTCGGCGGTAGAAGCAGAGAGGCTGGTGGCTGGCAAGCTCAAGAAGGATACGTACCTGGAAAACGAGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 90 bp | GTCTTCAGCCGAGACTGCAGTACAGCAATCTCGCTGGTCACAGCCTaGTGCTCTGTCTCTAGGCTCTTCTTGCCACTGTTGAGGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: VFSRDCSTAISLVTA*CSVSRLFLPLLRVE Trigger: CTCTACCCTCAACAGTGGCAAGAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAGCGAGATTGCTGTACTGCAGTCTCGGCTGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 90 bp | CGTTTTCCTGAGCTGAGCTTCTCGTTTTCCAGGTACGTATCCTTCTaGAGCTTGCCAGCCACCAGCCTCTCTGCTTCTACCGCCGACTTC | + |
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Preference number: 6 (lower is better) Translates to: RFPELSFSFSRYVSF*SLPATSLSASTADF Trigger: GAAGTCGGCGGTAGAAGCAGAGAGGCTGGTGGCTGGCAAGCTCAAGAAGGATACGTACCTGGAAAACGAGAAGCTCAGCTCAGGAAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS GCA 72 bp | GACTGCAGTACAGCAATCTCGCTGGTCACAGCCTTGTaGTCTGTCTCTAGGCTCTTCTTGCCACTGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DCSTAISLVTAL*SVSRLFLPLLR Trigger: CCTCAACAGTGGCAAGAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAGCGAGATTGCTGTACTGCAGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | CGAGACTGCAGTACAGCAATCTCGCTGGTCACAGCCTaGTGCTCTGTCTCTAGGCTCTTCTTGCCACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RDCSTAISLVTA*CSVSRLFLPLL Trigger: CAACAGTGGCAAGAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAGCGAGATTGCTGTACTGCAGTCTCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | GAGCTGAGCTTCTCGTTTTCCAGGTACGTATCCTTCTaGAGCTTGCCAGCCACCAGCCTCTCTGCTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: ELSFSFSRYVSF*SLPATSLSAST Trigger: GGTAGAAGCAGAGAGGCTGGTGGCTGGCAAGCTCAAGAAGGATACGTACCTGGAAAACGAGAAGCTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 90 bp | CTGGTCACAGCCTTGTGCTCTGTCTCTAGGCTCTTCTTGCCACTGTaGAGGGTAGAGATATCCCGGGACTGCTTGTATCTATTGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: LVTALCSVSRLFLPL*RVEISRDCLYLLTV Trigger: GACTGTCAATAGATACAAGCAGTCCCGGGATATCTCTACCCTCAACAGTGGCAAGAAGAGCCTAGAGACAGAGCACAAGGCTGTGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CCA 72 bp | AACGACCGAGATCTTGGACCCAGGATCAAGAGCAACTaGGAGCTTGACCGTGAAAAATCTCCCACTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: NDRDLGPRIKSN*ELDREKSPTFP Trigger: GGGAAAAGTGGGAGATTTTTCACGGTCAAGCTCCCAGTTGCTCTTGATCCTGGGTCCAAGATCTCGGTCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | GCCTTGTGCTCTGTCTCTAGGCTCTTCTTGCCACTGTaGAGGGTAGAGATATCCCGGGACTGCTTGTATCTA | + |
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Preference number: 6 (lower is better) Translates to: ALCSVSRLFLPL*RVEISRDCLYL Trigger: TAGATACAAGCAGTCCCGGGATATCTCTACCCTCAACAGTGGCAAGAAGAGCCTAGAGACAGAGCACAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 90 bp | GGCTCCCTCGGGCAAGATGATCTTCACTGTCAGAGAATCTATCACTaGCTCATCAAACACGTGGTCTACAAACCGCATCTTCAGTGCATA | + |
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Preference number: 6 (lower is better) Translates to: GSLGQDDLHCQRIYH*LIKHVVYKPHLQCI Trigger: TATGCACTGAAGATGCGGTTTGTAGACCACGTGTTTGATGAGCAAGTGATAGATTCTCTGACAGTGAAGATCATCTTGCCCGAGGGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 90 bp | TCTTCAGTGCATACTGGTCACCCAGATTATAGAGGTATTCATAGCTaGGGAGGTTGTAACCAACGATGTAGTGTGTCTTCCACCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SSVHTGHPDYRGIHS*GGCNQRCSVSSTLQ Trigger: TTGGAGGGTGGAAGACACACTACATCGTTGGTTACAACCTCCCAAGCTATGAATACCTCTATAATCTGGGTGACCAGTATGCACTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | GAGATCTTGGACCCAGGATCAAGAGCAACTGGGAGCTaGACCGTGAAAAATCTCCCACTTTTCCCTTTAATT | + |
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Preference number: 6 (lower is better) Translates to: EILDPGSRATGS*TVKNLPLFPLI Trigger: AATTAAAGGGAAAAGTGGGAGATTTTTCACGGTCAAGCTCCCAGTTGCTCTTGATCCTGGGTCCAAGATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | GTTGAACGTGTAGTGCACCACAATGTCCTGAATGTGTaGCTCGACGAGATTCTTCTTGTAAGCCACAATCAC | + |
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Preference number: 6 (lower is better) Translates to: VERVVHHNVLNV*LDEILLVSHNH Trigger: GTGATTGTGGCTTACAAGAAGAATCTCGTCGAGCAACACATTCAGGACATTGTGGTGCACTACACGTTCAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS GCA 72 bp | GGCAAGATGATCTTCACTGTCAGAGAATCTATCACTTaGTCATCAAACACGTGGTCTACAAACCGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: GKMIFTVRESIT*SSNTWSTNRIF Trigger: GAAGATGCGGTTTGTAGACCACGTGTTTGATGAGCAAGTGATAGATTCTCTGACAGTGAAGATCATCTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CCA 72 bp | ACTGTCAGAGAATCTATCACTTGCTCATCAAACACGTaGTCTACAAACCGCATCTTCAGTGCATACTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TVRESITCSSNT*STNRIFSAYWS Trigger: TGACCAGTATGCACTGAAGATGCGGTTTGTAGACCACGTGTTTGATGAGCAAGTGATAGATTCTCTGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | CATACTGGTCACCCAGATTATAGAGGTATTCATAGCTaGGGAGGTTGTAACCAACGATGTAGTGTGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HTGHPDYRGIHS*GGCNQRCSVSS Trigger: GGAAGACACACTACATCGTTGGTTACAACCTCCCAAGCTATGAATACCTCTATAATCTGGGTGACCAGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | GGGCAAGATGATCTTCACTGTCAGAGAATCTATCACTaGCTCATCAAACACGTGGTCTACAAACCGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GQDDLHCQRIYH*LIKHVVYKPHL Trigger: AAGATGCGGTTTGTAGACCACGTGTTTGATGAGCAAGTGATAGATTCTCTGACAGTGAAGATCATCTTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CCA 72 bp | ATACTGGTCACCCAGATTATAGAGGTATTCATAGCTTaGGAGGTTGTAACCAACGATGTAGTGTGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ILVTQIIEVFIA*EVVTNDVVCLP Trigger: TGGAAGACACACTACATCGTTGGTTACAACCTCCCAAGCTATGAATACCTCTATAATCTGGGTGACCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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| CDS CAA 72 bp | TTCCCTTTAATTTTGGTTTCTCGTACTTCTAGGTTGTaGTCTTCCTCATCTTCTCCCTTTATCTGCACGCCT | + |
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Preference number: 6 (lower is better) Translates to: FPLILVSRTSRL*SSSSSPFICTP Trigger: AGGCGTGCAGATAAAGGGAGAAGATGAGGAAGACAACAACCTAGAAGTACGAGAAACCAAAATTAAAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032143.8 |
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