Pregenerated sensors for RPL3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002500Ensembl transcript IDs: ENSMUST00000045186.11, ENSMUST00000170239.9, ENSMUST00000183214.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACATCCCTACTCGGGCAGGGTaGCAGGCGCCGATGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRTDSKSATSQVCSIPDIPTRAG*QAPMQA Trigger: GGCCTGCATCGGCGCCTGGCACCCTGCCCGAGTAGG...GATGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | GACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACATCGGTGCCAGGCGCCGATaGAGGCCACTTTGCGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRTDSKSATSQVCSIPDIGARRR*RPLCAS Trigger: GCTTGCGCAAAGTGGCCTGCATCGGCGCCTGGCACC...GATGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCACCTACTCGGGCAGGGTaGCAGGCGCCGATGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKDRTDSKSATSQVCSIPPTRAG*QAPMQA Trigger: GGCCTGCATCGGCGCCTGGCACCCTGCCCGAGTAGG...TGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | GACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACATCCGCCGGCTCCTCTTGTaGGGCAGGAAGCCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DRTDSKSATSQVCSIPDIRRLLL*GRKPRC Trigger: ACACCTGGGCTTCCTGCCCCACAAGAGGAGCCGGCG...GATGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | AGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACAGTTAGGTGCACCGGCTaGCTGGGGTCATCCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGQIARVLHPRCAPFQTVRCTG*LGSSRG Trigger: GCCTCGGGATGACCCCAGCCAGCCGGTGCACCTAAC...TGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGTTCACCTTGCCCCGGTaGCGCCGGCTCCTCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTGQIARVLHPRCAPFQFTLPR*RRLLLW Trigger: CCACAAGAGGAGCCGGCGGCACCGGGGCAAGGTGAA...CTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | AGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACACCGCAAAGATGGTCTTaGAGCTCCGCAGGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTGQIARVLHPRCAPFQTPQRWS*SSAGLS Trigger: CGAGAGGCCTGCGGAGCTTCAAGACCATCTTTGCGG...TGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | AGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACAAGGGCCCTGCGGCTGTaGTGCACCAGAAGGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTGQIARVLHPRCAPFQTRALRL*CTRRDF Trigger: AAAGTCCCTTCTGGTGCACCACAGCCGCAGGGCCCT...TGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGTCTGCAGCTGCTTCTTaGCGTCAGCGTCTCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KRTGQIARVLHPRCAPFQSAAAS*RQRLAT Trigger: GGTGGCGAGACGCTGACGGCAAGAAGCAGCTGCAGA...CTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | AGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTGGTGCACCGGCTGGCTaGGGTCATCCCGAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCLRTLLNKKDRTDSKSAGAPAG*GHPEAS Trigger: GCTGGCCTCGGGATGACCCCAGCCAGCCGGTGCACC...AGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGGAAGGGTGTGGGTCATaGCAGCCTTGTAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRTGQIARVLHPRCAPFQEGCGS*QPCSPG Trigger: TCCTGGGCTACAAGGCTGGCATGACCCACACCCTTC...CTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCTCTTTTGGGGACCCATaGAGGCCCTCTTCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LNKKDRTDSKSATSQVCSSFGDP*RPSSPA Trigger: CGCAGGAGAAGAGGGCCTTCATGGGTCCCCAAAAGA...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCTATTCTCCAGGGCCCTaGGGCTGTGGTGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNKKDRTDSKSATSQVCSYSPGP*GCGAPE Trigger: TTCTGGTGCACCACAGCCGCAGGGCCCTGGAGAATA...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCTTCTCCATCCGTGCCTaGACCCAAGCCACCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRTGQIARVLHPRCAPFFSIRA*TQATFS Trigger: TGAGAAGGTGGCTTGGGTTCAGGCACGGATGGAGAA...GAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | AAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACGGGACTTTCTCAGAGTaGTCACTCGCTTCTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KDRTDSKSATSQVCSIPDGTFSE*SLASWY Trigger: GTACCAAGAAGCGAGTGATCACTCTGAGAAAGTCCC...GTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | AACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTTCTTTTGGGGACCCATaGAGGCCCTCTTCTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NKKDRTDSKSATSQVCSISFGDP*RPSSPA Trigger: CGCAGGAGAAGAGGGCCTTCATGGGTCCCCAAAAGA...AATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | TTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCGGCGGCACTCATCGCTaGGGTGTTCCGCAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNKKDRTDSKSATSQVCGGTHR*GVPQRW Trigger: CCATCTTTGCGGAACACCTCAGCGATGAGTGCCGCC...GCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCCGATGCAGGCCACTTTaGGCAAGCCTTTGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNKKDRTDSKSATSQVCSRCRPL*ASLCGS Trigger: AGACCCACAAAGGCTTGCGCAAAGTGGCCTGCATCG...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | AACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTAAGCCCAGGTGTCCATaGCGAGGGGCAGAGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKKDRTDSKSATSQVCSIKPRCP*RGAENF Trigger: GAAGTTCTCTGCCCCTCGGCATGGACACCTGGGCTT...AATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | GACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACATCAAGTCTTTCTGCAGCTaGTTCTTGCCGTCAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRTDSKSATSQVCSIPDIKSFCS*FLPSAS Trigger: AGACGCTGACGGCAAGAAGCAGCTGCAGAAAGACTT...GATGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | AAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACTCCTTGGAAGCTTCTTaGTATGCCAGCGACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDRTDSKSATSQVCSIPDSLEAS*YASDWS Trigger: TGACCAGTCGCTGGCATACCAAGAAGCTTCCAAGGA...GTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | AGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACATCCAGATGTTTCTTTTaGGGACCCATGAAGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTGQIARVLHPRCAPFQTSRCFF*GPMKAL Trigger: GAGGGCCTTCATGGGTCCCCAAAAGAAACATCTGGA...TGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | AACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTTTCTCCATCCGTGCCTaGACCCAAGCCACCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKKDRTDSKSATSQVCSIFSIRA*TQATFS Trigger: TGAGAAGGTGGCTTGGGTTCAGGCACGGATGGAGAA...AATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCATGTGGGCCTTCTTCTaGCGAAAGGGCAGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRTGQIARVLHPRCAPFMWAFF*RKGSNF Trigger: GAAGTTGCTGCCCTTTCGGCAGAAGAAGGCCCACAT...GAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGTTGCGCAAGCCTTTGTaGGTCTTCCTTGGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTGQIARVLHPRCAPFQLRKPL*VFLGSF Trigger: GAAGCTTCCAAGGAAGACCCACAAAGGCTTGCGCAA...CTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTAGGGCCCTGCGGCTGTaGTGCACCAGAAGGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESCLRTLLNKKDRTDSKSRALRL*CTRRDF Trigger: AAAGTCCCTTCTGGTGCACCACAGCCGCAGGGCCCT...ACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTTATTCTCCAGGGCCCTaGGGCTGTGGTGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESCLRTLLNKKDRTDSKSYSPGP*GCGAPE Trigger: TTCTGGTGCACCACAGCCGCAGGGCCCTGGAGAATA...ACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTCGATGCAGGCCACTTTaGGCAAGCCTTTGTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLRTLLNKKDRTDSKSARCRPL*ASLCGS Trigger: AGACCCACAAAGGCTTGCGCAAAGTGGCCTGCATCG...AGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCGTCGTAGCTGGTGGATaGGTTGTTTCTGACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNKKDRTDSKSATSQVCSVVAGG*VVSDHL Trigger: AAGATGGTCAGAAACAACGCATCCACCAGCTACGAC...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTATGTGGGCCTTCTTCTaGCGAAAGGGCAGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESCLRTLLNKKDRTDSKSMWAFF*RKGSNF Trigger: GAAGTTGCTGCCCTTTCGGCAGAAGAAGGCCCACAT...ACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCTCAATAACCTCACTCTaGCTGAACACGCTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LNKKDRTDSKSATSQVCSSITSL*LNTLCT Trigger: TGTACACAGCGTGTTCAGCCAGAGTGAGGTTATTGA...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCTCAATAACCTCACTCTaGCTGAACACGCTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TKRTGQIARVLHPRCAPFSITSL*LNTLCT Trigger: TGTACACAGCGTGTTCAGCCAGAGTGAGGTTATTGA...GAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCTTTGTGGGTCTTCCTTaGAAGCTTCTTGGTATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNKKDRTDSKSATSQVCSFVGLP*KLLGMP Trigger: TGGCATACCAAGAAGCTTCCAAGGAAGACCCACAAA...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | TTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCAGATGTTTCTTTTaGGGACCCATGAAGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNKKDRTDSKSATSQVCSRCFF*GPMKAL Trigger: GAGGGCCTTCATGGGTCCCCAAAAGAAACATCTGGA...GCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR GCA 90 bp | TTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCGTCGTAGCTGGTGGATaGGTTGTTTCTGACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLNKKDRTDSKSATSQVCVVAGG*VVSDHL Trigger: AAGATGGTCAGAAACAACGCATCCACCAGCTACGAC...GCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | AGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTTCCTTGGAAGCTTCTTaGTATGCCAGCGACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLRTLLNKKDRTDSKSASLEAS*YASDWS Trigger: TGACCAGTCGCTGGCATACCAAGAAGCTTCCAAGGA...AGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTTTGCGCAAGCCTTTGTaGGTCTTCCTTGGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESCLRTLLNKKDRTDSKSLRKPL*VFLGSF Trigger: GAAGCTTCCAAGGAAGACCCACAAAGGCTTGCGCAA...ACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CCA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCTGCAGTACTTCTTCATaGCAGCAAAGTCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNKKDRTDSKSATSQVCSCSTSS*QQSLSA Trigger: TGCAGAAAGACTTTGCTGCCATGAAGAAGTACTGCA...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTTGGATGCGTTGTTTCTaGCCATCTTTCCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESCLRTLLNKKDRTDSKSWMRCF*PSFHLP Trigger: TGGAAGATGGAAAGATGGTCAGAAACAACGCATCCA...ACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR TCA 90 bp | AGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTTGGATGCGTTGTTTCTaGCCATCTTTCCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLRTLLNKKDRTDSKSAWMRCF*PSFHLP Trigger: TGGAAGATGGAAAGATGGTCAGAAACAACGCATCCA...AGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | AGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACAGGCCAGCTCTTCACCTaGCCCCGGTGCCGCCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTGQIARVLHPRCAPFQTGQLFT*PRCRRL Trigger: GAGCCGGCGGCACCGGGGCAAGGTGAAGAGCTGGCC...TGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS CCA 90 bp | ACACCCCGGCCCTTCGTGACAGCAATGACATCAATAACCTCACTCTaGCTGAACACGCTGTGTACAGGCACCTGCTTCTCCATCCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPRPFVTAMTSITSL*LNTLCTGTCFSIRA Trigger: GGCACGGATGGAGAAGCAGGTGCCTGTACACAGCGTGTTCAGCCAGAGTGAGGTTATTGATGTCATTGCTGTCACGAAGGGCCGGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTTGCCGCCGGCTCCTCTaGTGGGGCAGGAAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESCLRTLLNKKDRTDSKSCRRLL*WGRKPR Trigger: CCTGGGCTTCCTGCCCCACAAGAGGAGCCGGCGGCA...ACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | AAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACTCCGCAAAGATGGTCTaGAAGCTCCGCAGGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KDRTDSKSATSQVCSIPDSAKMV*KLRRPL Trigger: GAGAGGCCTGCGGAGCTTCAAGACCATCTTTGCGGA...GTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | AGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACAACTTTGCGCAAGCCTTaGTGGGTCTTCCTTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTGQIARVLHPRCAPFQTTLRKP*WVFLGS Trigger: GCTTCCAAGGAAGACCCACAAAGGCTTGCGCAAAGT...TGTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | AAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCAGACCTCCAGATGTTTCTTTaGGGGACCCATGAAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KDRTDSKSATSQVCSIPDLQMFL*GTHEGP Trigger: AGGGCCTTCATGGGTCCCCAAAAGAAACATCTGGAG...GTCTGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | TTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCCCGATGCAGGCCACTTaGCGCAAGCCTTTGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLNKKDRTDSKSATSQVCPMQAT*RKPLWV Trigger: GACCCACAAAGGCTTGCGCAAAGTGGCCTGCATCGG...GCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | TTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCTTCCTTGGAAGCTTCTaGGTATGCCAGCGACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNKKDRTDSKSATSQVCSFLGSF*VCQRLV Trigger: GACCAGTCGCTGGCATACCAAGAAGCTTCCAAGGAA...GGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGACCGGACAGATAGCAAGAGTGCTACATCCCAGGTGTGCTCCATTCCATTCCTTGGAAGCTTCTaGGTATGCCAGCGACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KKDRTDSKSATSQVCSIPFLGSF*VCQRLV Trigger: GACCAGTCGCTGGCATACCAAGAAGCTTCCAAGGAA...TGGAATGGAGCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | AGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTACTTTGCGCAAGCCTTaGTGGGTCTTCCTTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLRTLLNKKDRTDSKSATLRKP*WVFLGS Trigger: GCTTCCAAGGAAGACCCACAAAGGCTTGCGCAAAGT...AGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS-3UTR CAA 90 bp | AGTTGCCTCAGGACTTTATTGAACAAAAAGGACCGGACAGATAGCAAGAGTGCTCTCCAGATGTTTCTTTaGGGGACCCATGAAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SCLRTLLNKKDRTDSKSALQMFL*GTHEGP Trigger: AGGGCCTTCATGGGTCCCCAAAAGAAACATCTGGAG...AGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCAATAAAGTCCTGAGGCAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS GCA 72 bp | CTCGGGCAGGGTGCCAGGCGCCGATGCAGGCCACTTTaGGCAAGCCTTTGTGGGTCTTCCTTGGAAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGQGARRRCRPL*ASLCGSSLEAS Trigger: AGAAGCTTCCAAGGAAGACCCACAAAGGCTTGCGCAAAGTGGCCTGCATCGGCGCCTGGCACCCTGCCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS CAA 72 bp | ACTCGGGCAGGGTGCCAGGCGCCGATGCAGGCCACTTaGCGCAAGCCTTTGTGGGTCTTCCTTGGAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TRAGCQAPMQAT*RKPLWVFLGSF Trigger: GAAGCTTCCAAGGAAGACCCACAAAGGCTTGCGCAAAGTGGCCTGCATCGGCGCCTGGCACCCTGCCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS CCA 72 bp | AACTTGAGCTCAATATTCTCCAGGGCCCTGCGGCTGTaGTGCACCAGAAGGGACTTTCTCAGAGTGATCACT | + |
|
Preference number: 6 (lower is better) Translates to: NLSSIFSRALRL*CTRRDFLRVIT Trigger: AGTGATCACTCTGAGAAAGTCCCTTCTGGTGCACCACAGCCGCAGGGCCCTGGAGAATATTGAGCTCAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||
| CDS CAA 72 bp | ATTGTCACAGCTTCTACCTCCTCTCGCTTAGAAATTTaGAGTCCGGGTCGGTGCACTTCGCGAAGGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IVTASTSSRLEI*SPGRCTSRRVW Trigger: CCACACCCTTCGCGAAGTGCACCGACCCGGACTCAAAATTTCTAAGCGAGAGGAGGTAGAAGCTGTGACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170239.9 ENSMUST00000183214.2 |
||
| CDS CAA 72 bp | ACCAGAAGGGACTTTCTCAGAGTGATCACTCGCTTCTaGGTACCTGCAATGCAGCCCTTTAACATGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TRRDFLRVITRF*VPAMQPFNMMK Trigger: CTTCATCATGTTAAAGGGCTGCATTGCAGGTACCAAGAAGCGAGTGATCACTCTGAGAAAGTCCCTTCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045186.11 ENSMUST00000170239.9 |
||